View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21483_high_2 (Length: 471)

Name: NF21483_high_2
Description: NF21483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21483_high_2
NF21483_high_2
[»] chr5 (74 HSPs)
chr5 (7-471)||(16203748-16204220)
chr5 (50-134)||(21191052-21191136)
chr5 (43-122)||(28588663-28588742)
chr5 (59-133)||(14674249-14674323)
chr5 (7-126)||(6247609-6247725)
chr5 (54-127)||(11685925-11685998)
chr5 (73-169)||(19552562-19552658)
chr5 (61-133)||(27144443-27144515)
chr5 (55-134)||(36642763-36642842)
chr5 (54-128)||(3966488-3966562)
chr5 (54-132)||(19579682-19579760)
chr5 (15-168)||(24906264-24906415)
chr5 (45-133)||(43564863-43564949)
chr5 (67-134)||(22013393-22013460)
chr5 (43-166)||(30502377-30502500)
chr5 (43-166)||(30542720-30542843)
chr5 (54-164)||(13287399-13287509)
chr5 (54-168)||(21522695-21522809)
chr5 (54-168)||(21533261-21533375)
chr5 (50-124)||(33178014-33178088)
chr5 (15-168)||(6770488-6770643)
chr5 (50-134)||(19820392-19820474)
chr5 (44-133)||(21576735-21576824)
chr5 (50-123)||(23220973-23221046)
chr5 (61-133)||(7175026-7175098)
chr5 (14-93)||(15884008-15884085)
chr5 (43-127)||(23012397-23012480)
chr5 (54-130)||(39698524-39698600)
chr5 (54-105)||(36838551-36838602)
chr5 (54-168)||(6401443-6401557)
chr5 (53-168)||(15382422-15382539)
chr5 (43-113)||(18421830-18421900)
chr5 (54-144)||(37328844-37328934)
chr5 (54-127)||(2436908-2436981)
chr5 (54-127)||(19429418-19429491)
chr5 (54-127)||(31084309-31084382)
chr5 (54-127)||(39205866-39205939)
chr5 (50-134)||(6326293-6326377)
chr5 (55-103)||(14873527-14873575)
chr5 (56-168)||(17177025-17177137)
chr5 (61-133)||(19168828-19168900)
chr5 (54-134)||(22423812-22423892)
chr5 (74-134)||(40000555-40000615)
chr5 (69-133)||(43001780-43001844)
chr5 (60-127)||(5467984-5468051)
chr5 (9-127)||(6035469-6035592)
chr5 (54-105)||(6471889-6471940)
chr5 (44-127)||(12927640-12927723)
chr5 (58-129)||(30098310-30098381)
chr5 (54-113)||(41091257-41091316)
chr5 (51-129)||(8420011-8420089)
chr5 (56-134)||(15410450-15410528)
chr5 (50-128)||(17123033-17123111)
chr5 (65-163)||(35016987-35017085)
chr5 (43-121)||(42029744-42029822)
chr5 (50-128)||(42893345-42893423)
chr5 (61-134)||(9449448-9449521)
chr5 (54-132)||(16734847-16734927)
chr5 (71-144)||(42469190-42469263)
chr5 (50-134)||(26312748-26312832)
chr5 (66-158)||(28262408-28262500)
chr5 (52-115)||(2577178-2577241)
chr5 (56-130)||(19737484-19737558)
chr5 (63-113)||(24273039-24273089)
chr5 (63-113)||(24389125-24389175)
chr5 (52-122)||(32630733-32630803)
chr5 (54-115)||(7677703-7677764)
chr5 (50-134)||(14422883-14422965)
chr5 (55-128)||(21351906-21351979)
chr5 (69-134)||(41995450-41995515)
chr5 (50-126)||(7997163-7997238)
chr5 (70-130)||(12641657-12641717)
chr5 (50-102)||(15086482-15086534)
chr5 (58-122)||(26609344-26609408)
[»] chr3 (91 HSPs)
chr3 (50-168)||(25093447-25093565)
chr3 (50-168)||(10268482-10268600)
chr3 (54-168)||(28678248-28678362)
chr3 (44-134)||(55401054-55401144)
chr3 (50-134)||(8383236-8383320)
chr3 (44-168)||(10335276-10335400)
chr3 (50-168)||(24205038-24205155)
chr3 (61-134)||(32804547-32804620)
chr3 (50-130)||(49505150-49505230)
chr3 (50-133)||(8587017-8587100)
chr3 (54-168)||(15796294-15796408)
chr3 (50-168)||(16000012-16000130)
chr3 (50-115)||(7928448-7928513)
chr3 (44-133)||(10954932-10955021)
chr3 (42-126)||(8789538-8789622)
chr3 (54-126)||(11665931-11666003)
chr3 (54-134)||(28917980-28918060)
chr3 (70-133)||(21720744-21720807)
chr3 (54-133)||(25948887-25948966)
chr3 (43-134)||(26492194-26492285)
chr3 (44-133)||(10318025-10318113)
chr3 (62-115)||(11313808-11313861)
chr3 (60-165)||(11658764-11658868)
chr3 (72-168)||(3164043-3164139)
chr3 (50-128)||(25775493-25775572)
chr3 (15-93)||(40993287-40993374)
chr3 (66-168)||(4469795-4469897)
chr3 (52-130)||(18426932-18427010)
chr3 (53-127)||(21479104-21479178)
chr3 (68-134)||(25064888-25064954)
chr3 (69-126)||(4987306-4987363)
chr3 (15-127)||(20503451-20503572)
chr3 (54-127)||(26290357-26290430)
chr3 (43-112)||(45451554-45451623)
chr3 (59-127)||(1514603-1514671)
chr3 (44-168)||(7171447-7171570)
chr3 (54-122)||(8039835-8039903)
chr3 (54-134)||(9800019-9800099)
chr3 (54-102)||(15314876-15314924)
chr3 (50-126)||(20691306-20691382)
chr3 (54-105)||(1509547-1509598)
chr3 (69-168)||(3610578-3610677)
chr3 (43-134)||(8842309-8842399)
chr3 (60-150)||(12674504-12674597)
chr3 (69-127)||(14747547-14747606)
chr3 (54-133)||(14829670-14829748)
chr3 (62-121)||(16192758-16192817)
chr3 (57-124)||(26508099-26508166)
chr3 (44-127)||(35222924-35223007)
chr3 (50-112)||(4201397-4201459)
chr3 (72-130)||(5339091-5339149)
chr3 (54-168)||(10455735-10455849)
chr3 (62-152)||(25652039-25652129)
chr3 (50-168)||(35994735-35994851)
chr3 (55-129)||(48202270-48202344)
chr3 (54-115)||(7614415-7614476)
chr3 (65-134)||(11493372-11493441)
chr3 (56-105)||(17005621-17005670)
chr3 (44-113)||(24633391-24633460)
chr3 (68-113)||(27277852-27277897)
chr3 (54-127)||(34185123-34185196)
chr3 (54-127)||(39756222-39756295)
chr3 (56-133)||(55212943-55213020)
chr3 (70-134)||(14979160-14979224)
chr3 (60-168)||(34307786-34307894)
chr3 (53-105)||(38731226-38731278)
chr3 (90-133)||(3865592-3865635)
chr3 (67-134)||(14840304-14840371)
chr3 (50-121)||(15864825-15864895)
chr3 (54-121)||(34910309-34910376)
chr3 (80-127)||(40052318-40052365)
chr3 (54-121)||(49651786-49651853)
chr3 (50-105)||(51206349-51206404)
chr3 (72-134)||(2620071-2620133)
chr3 (44-78)||(2941593-2941627)
chr3 (55-133)||(13807149-13807227)
chr3 (51-133)||(33359741-33359823)
chr3 (54-144)||(39002001-39002091)
chr3 (64-121)||(12703999-12704056)
chr3 (62-127)||(15544679-15544744)
chr3 (60-105)||(29508452-29508497)
chr3 (67-131)||(5407260-5407324)
chr3 (65-113)||(9624641-9624689)
chr3 (50-105)||(11251986-11252039)
chr3 (50-78)||(13845521-13845549)
chr3 (54-134)||(14216871-14216951)
chr3 (54-134)||(14223000-14223080)
chr3 (54-130)||(27505229-27505305)
chr3 (54-130)||(28812499-28812574)
chr3 (61-133)||(37077338-37077410)
chr3 (54-134)||(41961650-41961730)
[»] chr6 (101 HSPs)
chr6 (56-168)||(7086740-7086852)
chr6 (50-134)||(5732506-5732590)
chr6 (50-168)||(426510-426628)
chr6 (50-168)||(7938061-7938179)
chr6 (56-168)||(8805576-8805686)
chr6 (45-133)||(17841580-17841668)
chr6 (44-132)||(33001279-33001367)
chr6 (50-129)||(7265589-7265668)
chr6 (61-134)||(17341671-17341744)
chr6 (43-124)||(19040341-19040422)
chr6 (54-134)||(9027157-9027237)
chr6 (54-169)||(16766641-16766756)
chr6 (54-168)||(9107370-9107484)
chr6 (56-134)||(9658858-9658936)
chr6 (44-134)||(34595113-34595203)
chr6 (44-133)||(28152079-28152167)
chr6 (44-168)||(8776963-8777087)
chr6 (12-118)||(21924900-21924999)
chr6 (56-132)||(26178683-26178759)
chr6 (54-134)||(34073347-34073427)
chr6 (54-133)||(7996378-7996457)
chr6 (54-133)||(8022344-8022423)
chr6 (54-132)||(677818-677896)
chr6 (54-168)||(10294052-10294166)
chr6 (62-168)||(10888982-10889088)
chr6 (53-134)||(9629362-9629443)
chr6 (48-133)||(20371104-20371189)
chr6 (54-131)||(26562671-26562748)
chr6 (60-168)||(1681703-1681811)
chr6 (53-168)||(3209327-3209442)
chr6 (54-134)||(3398598-3398677)
chr6 (50-134)||(7977826-7977910)
chr6 (54-134)||(12696303-12696383)
chr6 (50-134)||(13851715-13851799)
chr6 (43-134)||(31579216-31579305)
chr6 (54-113)||(9025494-9025553)
chr6 (60-127)||(10842518-10842585)
chr6 (55-134)||(19044443-19044522)
chr6 (54-144)||(8365519-8365609)
chr6 (54-168)||(21395308-21395421)
chr6 (45-126)||(7377966-7378047)
chr6 (54-130)||(7930288-7930364)
chr6 (54-114)||(9195754-9195814)
chr6 (54-134)||(10770674-10770754)
chr6 (64-127)||(24833243-24833306)
chr6 (54-125)||(32320669-32320740)
chr6 (54-132)||(34447360-34447436)
chr6 (52-134)||(853857-853939)
chr6 (60-134)||(6389722-6389796)
chr6 (56-134)||(16833287-16833365)
chr6 (60-105)||(24832596-24832641)
chr6 (43-134)||(4877921-4878013)
chr6 (50-122)||(13364701-13364773)
chr6 (56-168)||(32299220-32299332)
chr6 (50-105)||(403860-403915)
chr6 (54-105)||(7151420-7151471)
chr6 (54-105)||(9617442-9617493)
chr6 (60-127)||(17168469-17168536)
chr6 (44-118)||(30851597-30851669)
chr6 (43-121)||(32978888-32978967)
chr6 (69-127)||(5970123-5970181)
chr6 (50-128)||(6898277-6898355)
chr6 (54-168)||(18367782-18367895)
chr6 (54-168)||(24115847-24115961)
chr6 (59-133)||(30866149-30866223)
chr6 (59-133)||(31959139-31959213)
chr6 (54-127)||(7723250-7723323)
chr6 (53-126)||(7801155-7801228)
chr6 (69-134)||(25038086-25038151)
chr6 (44-105)||(28715303-28715364)
chr6 (63-144)||(1532207-1532290)
chr6 (54-129)||(7027225-7027301)
chr6 (44-104)||(7740650-7740710)
chr6 (61-168)||(10339132-10339240)
chr6 (50-102)||(13360368-13360420)
chr6 (54-134)||(21068154-21068234)
chr6 (45-133)||(23771559-23771646)
chr6 (54-133)||(28862101-28862181)
chr6 (45-133)||(32298598-32298686)
chr6 (44-127)||(5626686-5626769)
chr6 (54-133)||(6214540-6214619)
chr6 (55-134)||(11784217-11784296)
chr6 (88-127)||(12868709-12868748)
chr6 (54-120)||(8931602-8931668)
chr6 (89-131)||(10760876-10760918)
chr6 (50-124)||(34172182-34172256)
chr6 (50-103)||(1700362-1700415)
chr6 (60-133)||(2153893-2153966)
chr6 (50-103)||(4864073-4864126)
chr6 (53-134)||(7625101-7625182)
chr6 (60-101)||(11591876-11591917)
chr6 (54-99)||(17327655-17327700)
chr6 (56-113)||(24138426-24138483)
chr6 (59-132)||(25096404-25096477)
chr6 (52-105)||(32511664-32511717)
chr6 (61-126)||(33340392-33340457)
chr6 (61-126)||(35125641-35125706)
chr6 (14-85)||(16388174-16388248)
chr6 (61-105)||(17302355-17302399)
chr6 (90-134)||(24831786-24831830)
chr6 (50-105)||(33817957-33818015)
[»] chr8 (70 HSPs)
chr8 (54-144)||(11927086-11927176)
chr8 (54-144)||(11944634-11944724)
chr8 (51-168)||(926785-926902)
chr8 (50-127)||(13844592-13844669)
chr8 (56-168)||(11803204-11803316)
chr8 (50-134)||(20873048-20873132)
chr8 (43-134)||(33405373-33405464)
chr8 (54-130)||(15816129-15816205)
chr8 (52-127)||(4786336-4786411)
chr8 (55-134)||(28384995-28385074)
chr8 (62-168)||(36934615-36934721)
chr8 (50-130)||(34897068-34897148)
chr8 (54-173)||(22651916-22652035)
chr8 (50-133)||(31109514-31109597)
chr8 (50-121)||(31236573-31236644)
chr8 (7-133)||(36450698-36450833)
chr8 (57-127)||(39954282-39954352)
chr8 (43-128)||(27101500-27101584)
chr8 (56-168)||(29510306-29510418)
chr8 (60-168)||(44067461-44067569)
chr8 (55-134)||(4298887-4298966)
chr8 (54-133)||(25172698-25172777)
chr8 (59-134)||(27213526-27213601)
chr8 (44-130)||(5813575-5813661)
chr8 (43-125)||(31556985-31557066)
chr8 (54-175)||(2572056-2572177)
chr8 (7-105)||(8342980-8343082)
chr8 (54-166)||(16867205-16867320)
chr8 (61-134)||(24362209-24362282)
chr8 (50-134)||(18170478-18170562)
chr8 (50-134)||(18634046-18634130)
chr8 (54-134)||(24669412-24669492)
chr8 (62-113)||(14731712-14731763)
chr8 (50-168)||(24413555-24413674)
chr8 (50-125)||(24613509-24613583)
chr8 (17-168)||(37283769-37283924)
chr8 (48-114)||(12606823-12606889)
chr8 (78-132)||(12936515-12936569)
chr8 (55-133)||(14134679-14134757)
chr8 (44-105)||(3025559-3025620)
chr8 (55-168)||(22197743-22197856)
chr8 (57-130)||(25192350-25192423)
chr8 (54-134)||(8343295-8343375)
chr8 (50-105)||(4948660-4948715)
chr8 (54-133)||(13436964-13437043)
chr8 (51-126)||(22595981-22596056)
chr8 (51-114)||(31580124-31580187)
chr8 (58-105)||(34222955-34223002)
chr8 (90-168)||(24857954-24858032)
chr8 (64-134)||(29776015-29776085)
chr8 (69-134)||(4673440-4673505)
chr8 (55-127)||(29357962-29358035)
chr8 (50-134)||(3677765-3677849)
chr8 (56-132)||(13018262-13018338)
chr8 (55-127)||(20679396-20679468)
chr8 (69-129)||(30271306-30271366)
chr8 (60-127)||(12570514-12570581)
chr8 (50-105)||(12985400-12985455)
chr8 (54-105)||(25566849-25566900)
chr8 (54-93)||(26902175-26902214)
chr8 (57-115)||(4611532-4611590)
chr8 (56-118)||(7658458-7658520)
chr8 (54-92)||(8847277-8847315)
chr8 (66-132)||(24447010-24447076)
chr8 (66-124)||(26529730-26529788)
chr8 (72-126)||(41831958-41832012)
chr8 (45-78)||(43737802-43737835)
chr8 (61-105)||(20785472-20785516)
chr8 (54-106)||(28383830-28383882)
chr8 (52-128)||(30077385-30077461)
[»] chr7 (90 HSPs)
chr7 (54-168)||(1433399-1433513)
chr7 (50-168)||(18213029-18213148)
chr7 (56-134)||(15902801-15902879)
chr7 (50-144)||(26733273-26733367)
chr7 (54-168)||(22602710-22602824)
chr7 (44-133)||(15680789-15680878)
chr7 (50-134)||(3721073-3721156)
chr7 (50-134)||(11061072-11061156)
chr7 (50-126)||(20549778-20549854)
chr7 (43-134)||(22484004-22484095)
chr7 (54-168)||(5409836-5409950)
chr7 (54-144)||(7328691-7328781)
chr7 (50-168)||(25481847-25481965)
chr7 (54-168)||(26329382-26329496)
chr7 (54-128)||(32308105-32308179)
chr7 (54-127)||(9408334-9408407)
chr7 (54-134)||(10042916-10042996)
chr7 (54-134)||(24339621-24339701)
chr7 (54-134)||(27945020-27945100)
chr7 (56-127)||(5233615-5233686)
chr7 (51-130)||(9482917-9482996)
chr7 (55-134)||(19206029-19206108)
chr7 (57-134)||(2425736-2425813)
chr7 (53-134)||(24105657-24105738)
chr7 (60-133)||(43249973-43250046)
chr7 (56-132)||(21828407-21828483)
chr7 (54-134)||(49107800-49107879)
chr7 (57-124)||(2948672-2948739)
chr7 (55-126)||(7438693-7438764)
chr7 (54-113)||(16341496-16341555)
chr7 (54-161)||(18013074-18013181)
chr7 (61-132)||(22868023-22868094)
chr7 (45-127)||(5835233-5835315)
chr7 (54-127)||(6630912-6630985)
chr7 (52-121)||(21568620-21568689)
chr7 (50-127)||(42720886-42720963)
chr7 (54-134)||(5235965-5236045)
chr7 (54-134)||(13770670-13770750)
chr7 (56-168)||(17851376-17851488)
chr7 (50-130)||(23191879-23191959)
chr7 (68-132)||(29787383-29787447)
chr7 (56-120)||(33384584-33384648)
chr7 (50-106)||(38143230-38143286)
chr7 (54-134)||(43027469-43027549)
chr7 (54-133)||(18215186-18215265)
chr7 (56-115)||(27093415-27093474)
chr7 (56-115)||(27184827-27184886)
chr7 (43-126)||(41020483-41020566)
chr7 (45-131)||(1401007-1401093)
chr7 (60-134)||(4017800-4017874)
chr7 (62-168)||(5956218-5956324)
chr7 (80-134)||(11722124-11722178)
chr7 (50-144)||(21826242-21826336)
chr7 (43-105)||(21880160-21880222)
chr7 (50-120)||(28155563-28155633)
chr7 (55-133)||(37742503-37742581)
chr7 (44-133)||(598188-598277)
chr7 (65-134)||(10377486-10377555)
chr7 (44-134)||(21864785-21864877)
chr7 (45-114)||(32287454-32287523)
chr7 (54-123)||(2334238-2334309)
chr7 (57-133)||(3520345-3520421)
chr7 (43-127)||(3554495-3554579)
chr7 (54-133)||(21138996-21139072)
chr7 (50-126)||(37870880-37870956)
chr7 (58-133)||(4008568-4008643)
chr7 (58-133)||(4013960-4014035)
chr7 (54-105)||(19992009-19992060)
chr7 (54-133)||(25791633-25791711)
chr7 (73-168)||(29763193-29763288)
chr7 (54-168)||(30730982-30731094)
chr7 (50-93)||(39138464-39138507)
chr7 (54-116)||(5548673-5548735)
chr7 (50-132)||(7197293-7197375)
chr7 (60-106)||(8239056-8239102)
chr7 (50-112)||(12278836-12278897)
chr7 (49-115)||(24146814-24146880)
chr7 (54-104)||(27229311-27229360)
chr7 (55-92)||(640134-640171)
chr7 (68-132)||(12289094-12289159)
chr7 (54-167)||(21140982-21141095)
chr7 (58-107)||(27732243-27732292)
chr7 (54-134)||(2034420-2034500)
chr7 (43-127)||(8234132-8234216)
chr7 (54-102)||(17307904-17307952)
chr7 (60-104)||(19930947-19930991)
chr7 (50-114)||(23751899-23751962)
chr7 (54-106)||(35297672-35297724)
chr7 (54-126)||(35861951-35862023)
chr7 (66-134)||(48246825-48246893)
[»] chr1 (101 HSPs)
chr1 (15-127)||(22881579-22881689)
chr1 (15-168)||(42359401-42359563)
chr1 (44-133)||(46348373-46348462)
chr1 (50-133)||(52903229-52903312)
chr1 (55-132)||(19562622-19562699)
chr1 (50-166)||(9709767-9709883)
chr1 (43-131)||(22515876-22515964)
chr1 (61-168)||(398772-398879)
chr1 (50-169)||(9103584-9103702)
chr1 (54-168)||(6612171-6612285)
chr1 (50-127)||(36878447-36878524)
chr1 (54-134)||(1486709-1486789)
chr1 (43-127)||(13997869-13997953)
chr1 (43-127)||(21530675-21530759)
chr1 (45-132)||(2896112-2896199)
chr1 (54-168)||(25272427-25272541)
chr1 (43-133)||(38078650-38078740)
chr1 (50-128)||(39953142-39953220)
chr1 (50-168)||(41877466-41877584)
chr1 (50-115)||(1864876-1864941)
chr1 (44-133)||(5898256-5898345)
chr1 (45-134)||(5927331-5927420)
chr1 (54-131)||(6427332-6427409)
chr1 (44-129)||(37598816-37598900)
chr1 (58-122)||(34257914-34257978)
chr1 (50-122)||(39130763-39130835)
chr1 (54-121)||(9828036-9828103)
chr1 (50-105)||(14332638-14332693)
chr1 (54-133)||(34712383-34712462)
chr1 (50-113)||(40181871-40181934)
chr1 (59-134)||(48450592-48450667)
chr1 (50-120)||(13436451-13436521)
chr1 (55-168)||(16927186-16927297)
chr1 (55-133)||(38503300-38503378)
chr1 (54-168)||(47989443-47989556)
chr1 (67-168)||(34298381-34298482)
chr1 (50-127)||(38075966-38076043)
chr1 (54-134)||(5376500-5376580)
chr1 (69-133)||(18556471-18556535)
chr1 (54-134)||(20157350-20157430)
chr1 (43-130)||(1815240-1815327)
chr1 (54-134)||(5944260-5944342)
chr1 (15-168)||(13011178-13011330)
chr1 (60-127)||(17831537-17831604)
chr1 (17-123)||(113289-113398)
chr1 (55-133)||(6415002-6415080)
chr1 (54-168)||(7918211-7918325)
chr1 (56-126)||(10572591-10572661)
chr1 (50-168)||(10577731-10577849)
chr1 (50-127)||(25452146-25452221)
chr1 (50-128)||(31672891-31672969)
chr1 (50-131)||(12443457-12443537)
chr1 (69-134)||(14359537-14359601)
chr1 (61-134)||(15323142-15323215)
chr1 (53-113)||(29229461-29229522)
chr1 (54-103)||(44482240-44482289)
chr1 (54-134)||(9629900-9629980)
chr1 (50-134)||(23636045-23636129)
chr1 (61-133)||(32724105-32724177)
chr1 (44-131)||(7353483-7353570)
chr1 (66-133)||(15641042-15641109)
chr1 (50-93)||(30749860-30749903)
chr1 (50-93)||(30771311-30771354)
chr1 (59-134)||(31015022-31015097)
chr1 (44-115)||(40258923-40258994)
chr1 (56-134)||(17754290-17754368)
chr1 (50-104)||(18337338-18337392)
chr1 (63-125)||(19324550-19324612)
chr1 (44-126)||(29163371-29163453)
chr1 (54-128)||(40285654-40285728)
chr1 (50-115)||(2784554-2784619)
chr1 (44-133)||(8842704-8842793)
chr1 (54-127)||(24577186-24577259)
chr1 (54-103)||(25361896-25361945)
chr1 (54-134)||(40917730-40917808)
chr1 (58-134)||(48040465-48040542)
chr1 (54-130)||(1704992-1705068)
chr1 (61-105)||(16164322-16164366)
chr1 (50-122)||(19058852-19058924)
chr1 (54-98)||(34371728-34371772)
chr1 (15-127)||(35702554-35702661)
chr1 (60-127)||(3490396-3490463)
chr1 (62-105)||(17425101-17425144)
chr1 (62-121)||(25098563-25098622)
chr1 (55-126)||(27471567-27471638)
chr1 (69-168)||(37055871-37055969)
chr1 (80-134)||(1262863-1262917)
chr1 (7-45)||(1486648-1486686)
chr1 (75-133)||(16812523-16812581)
chr1 (56-134)||(21378557-21378635)
chr1 (61-107)||(23804434-23804480)
chr1 (56-134)||(30847722-30847800)
chr1 (62-128)||(36905982-36906048)
chr1 (44-105)||(51410032-51410094)
chr1 (56-105)||(10233261-10233310)
chr1 (64-105)||(12713337-12713378)
chr1 (64-105)||(12717428-12717469)
chr1 (50-127)||(22907335-22907412)
chr1 (44-121)||(28674792-28674869)
chr1 (54-115)||(44296495-44296555)
chr1 (50-129)||(24334701-24334781)
[»] chr2 (77 HSPs)
chr2 (43-133)||(30404839-30404929)
chr2 (62-167)||(21616708-21616813)
chr2 (44-160)||(15972826-15972942)
chr2 (58-133)||(30527599-30527674)
chr2 (55-173)||(18276461-18276579)
chr2 (52-133)||(23718006-23718087)
chr2 (52-133)||(24105678-24105759)
chr2 (54-134)||(20539674-20539754)
chr2 (50-134)||(31018569-31018653)
chr2 (15-133)||(37558957-37559084)
chr2 (54-168)||(34784982-34785096)
chr2 (54-134)||(18421942-18422022)
chr2 (50-134)||(20242723-20242807)
chr2 (68-168)||(28412295-28412395)
chr2 (42-132)||(31284029-31284120)
chr2 (50-105)||(34691801-34691856)
chr2 (50-105)||(34714213-34714268)
chr2 (43-105)||(5367200-5367262)
chr2 (63-133)||(16069263-16069333)
chr2 (68-126)||(21782832-21782890)
chr2 (50-134)||(19536393-19536478)
chr2 (61-126)||(35449500-35449565)
chr2 (50-126)||(896198-896274)
chr2 (53-133)||(28677889-28677968)
chr2 (43-127)||(31808063-31808147)
chr2 (15-132)||(2438671-2438795)
chr2 (55-133)||(14996224-14996303)
chr2 (43-134)||(18841002-18841093)
chr2 (50-144)||(21624235-21624330)
chr2 (54-133)||(37411244-37411323)
chr2 (56-123)||(39279665-39279732)
chr2 (54-105)||(44860328-44860379)
chr2 (44-134)||(6940234-6940324)
chr2 (61-130)||(27286299-27286368)
chr2 (50-127)||(38117155-38117232)
chr2 (44-113)||(40361744-40361813)
chr2 (56-124)||(18420436-18420504)
chr2 (69-133)||(21374714-21374778)
chr2 (54-134)||(30335396-30335476)
chr2 (54-134)||(30717530-30717610)
chr2 (55-127)||(32199141-32199213)
chr2 (78-134)||(34337200-34337256)
chr2 (55-134)||(36409630-36409707)
chr2 (54-134)||(36756344-36756424)
chr2 (50-93)||(20922924-20922967)
chr2 (69-132)||(24894370-24894433)
chr2 (54-124)||(12668423-12668493)
chr2 (55-133)||(42832277-42832355)
chr2 (54-134)||(2331773-2331851)
chr2 (54-134)||(23058442-23058523)
chr2 (50-127)||(29176489-29176566)
chr2 (54-134)||(15657843-15657923)
chr2 (69-133)||(39323244-39323308)
chr2 (50-105)||(5473336-5473391)
chr2 (50-105)||(18255976-18256031)
chr2 (54-105)||(18622614-18622665)
chr2 (64-107)||(36281691-36281734)
chr2 (54-129)||(37419727-37419802)
chr2 (63-105)||(2665897-2665939)
chr2 (59-134)||(10547933-10548010)
chr2 (55-133)||(11223864-11223942)
chr2 (55-105)||(18889592-18889642)
chr2 (48-130)||(21091706-21091788)
chr2 (51-105)||(22085012-22085066)
chr2 (60-118)||(24011031-24011089)
chr2 (69-134)||(12940950-12941015)
chr2 (54-127)||(15909632-15909705)
chr2 (60-133)||(23354658-23354731)
chr2 (54-127)||(29970549-29970622)
chr2 (50-154)||(30298445-30298547)
chr2 (55-100)||(38355888-38355933)
chr2 (50-133)||(18589178-18589259)
chr2 (54-114)||(24975325-24975385)
chr2 (67-127)||(25080886-25080946)
chr2 (88-132)||(32355408-32355452)
chr2 (50-126)||(37497107-37497183)
chr2 (66-134)||(41942084-41942152)
[»] scaffold0652 (1 HSPs)
scaffold0652 (50-167)||(458-575)
[»] scaffold0053 (1 HSPs)
scaffold0053 (44-168)||(8743-8867)
[»] chr4 (73 HSPs)
chr4 (54-168)||(13134396-13134509)
chr4 (15-168)||(23292938-23293100)
chr4 (54-168)||(19482613-19482727)
chr4 (43-133)||(40179625-40179715)
chr4 (45-134)||(12895265-12895354)
chr4 (61-134)||(14126118-14126191)
chr4 (43-132)||(35157974-35158063)
chr4 (6-133)||(21945483-21945619)
chr4 (43-122)||(48139255-48139334)
chr4 (53-127)||(15029751-15029825)
chr4 (60-168)||(24343452-24343560)
chr4 (54-134)||(40742570-40742650)
chr4 (44-134)||(49431004-49431095)
chr4 (64-130)||(903905-903971)
chr4 (69-163)||(27706192-27706286)
chr4 (62-168)||(36635269-36635375)
chr4 (50-127)||(2361971-2362048)
chr4 (55-132)||(11931261-11931338)
chr4 (54-131)||(30838192-30838269)
chr4 (44-105)||(54580013-54580074)
chr4 (50-134)||(12797334-12797417)
chr4 (80-144)||(20521875-20521939)
chr4 (54-133)||(30298926-30299006)
chr4 (54-133)||(30327794-30327874)
chr4 (55-106)||(5775359-5775410)
chr4 (54-133)||(13783261-13783340)
chr4 (63-134)||(22440609-22440680)
chr4 (59-122)||(40613441-40613504)
chr4 (61-168)||(44081584-44081691)
chr4 (45-115)||(8423709-8423779)
chr4 (42-132)||(10499258-10499347)
chr4 (54-112)||(15659760-15659818)
chr4 (50-168)||(33950081-33950199)
chr4 (54-127)||(35723384-35723458)
chr4 (56-133)||(6485613-6485690)
chr4 (54-130)||(22234890-22234967)
chr4 (54-130)||(16303266-16303342)
chr4 (54-130)||(18743863-18743938)
chr4 (58-133)||(26504303-26504378)
chr4 (44-127)||(34306794-34306876)
chr4 (54-121)||(35952617-35952684)
chr4 (54-121)||(36409512-36409578)
chr4 (54-121)||(36423678-36423744)
chr4 (54-132)||(3947766-3947844)
chr4 (43-105)||(4157158-4157219)
chr4 (55-105)||(7214523-7214573)
chr4 (50-128)||(16073380-16073457)
chr4 (90-168)||(20633430-20633508)
chr4 (43-105)||(28964237-28964299)
chr4 (43-105)||(29205452-29205514)
chr4 (56-133)||(7012046-7012123)
chr4 (50-115)||(9996838-9996903)
chr4 (66-127)||(21539879-21539940)
chr4 (54-127)||(46160882-46160955)
chr4 (54-134)||(5414172-5414252)
chr4 (62-126)||(20743286-20743350)
chr4 (54-133)||(12895116-12895194)
chr4 (50-101)||(16189721-16189772)
chr4 (55-106)||(21720508-21720559)
chr4 (54-167)||(30982878-30982988)
chr4 (43-93)||(4157456-4157506)
chr4 (52-118)||(4672083-4672149)
chr4 (54-92)||(46083991-46084029)
chr4 (60-105)||(999354-999399)
chr4 (54-127)||(11596352-11596425)
chr4 (80-133)||(12077808-12077861)
chr4 (88-133)||(12628619-12628664)
chr4 (55-104)||(30103358-30103406)
chr4 (69-134)||(40481616-40481680)
chr4 (50-126)||(42640513-42640592)
chr4 (54-121)||(4099953-4100023)
chr4 (55-127)||(9299056-9299127)
chr4 (55-103)||(18576038-18576086)
[»] scaffold0003 (1 HSPs)
scaffold0003 (54-134)||(241573-241653)
[»] scaffold0027 (1 HSPs)
scaffold0027 (54-168)||(46627-46741)
[»] scaffold0697 (1 HSPs)
scaffold0697 (43-127)||(1630-1714)
[»] scaffold0223 (1 HSPs)
scaffold0223 (54-134)||(20151-20231)
[»] scaffold0168 (1 HSPs)
scaffold0168 (58-166)||(20990-21098)
[»] scaffold0110 (1 HSPs)
scaffold0110 (15-131)||(28832-28948)
[»] scaffold0103 (1 HSPs)
scaffold0103 (69-133)||(51791-51855)
[»] scaffold0050 (1 HSPs)
scaffold0050 (44-132)||(70259-70347)
[»] scaffold0020 (1 HSPs)
scaffold0020 (54-134)||(135312-135392)
[»] scaffold0021 (1 HSPs)
scaffold0021 (57-168)||(130427-130538)
[»] scaffold0306 (1 HSPs)
scaffold0306 (53-133)||(13380-13460)
[»] scaffold0171 (2 HSPs)
scaffold0171 (54-134)||(23399-23479)
scaffold0171 (54-126)||(23497-23570)
[»] scaffold0152 (1 HSPs)
scaffold0152 (53-133)||(21867-21947)
[»] scaffold0018 (2 HSPs)
scaffold0018 (55-134)||(178819-178899)
scaffold0018 (69-130)||(192264-192325)
[»] scaffold0008 (1 HSPs)
scaffold0008 (54-134)||(263372-263452)
[»] scaffold0007 (1 HSPs)
scaffold0007 (60-168)||(225274-225382)
[»] scaffold0236 (1 HSPs)
scaffold0236 (54-113)||(25768-25827)
[»] scaffold0004 (1 HSPs)
scaffold0004 (69-130)||(92790-92851)
[»] scaffold0722 (1 HSPs)
scaffold0722 (50-130)||(7028-7108)
[»] scaffold0136 (1 HSPs)
scaffold0136 (54-134)||(3849-3929)
[»] scaffold0022 (1 HSPs)
scaffold0022 (50-134)||(90822-90906)
[»] scaffold0376 (1 HSPs)
scaffold0376 (54-113)||(6312-6371)
[»] scaffold0036 (1 HSPs)
scaffold0036 (54-105)||(9747-9798)
[»] scaffold1528 (1 HSPs)
scaffold1528 (56-134)||(1014-1092)
[»] scaffold0116 (1 HSPs)
scaffold0116 (54-168)||(9843-9957)
[»] scaffold0044 (1 HSPs)
scaffold0044 (57-123)||(53170-53236)
[»] scaffold0011 (1 HSPs)
scaffold0011 (55-105)||(17750-17800)
[»] scaffold0122 (2 HSPs)
scaffold0122 (54-134)||(8645-8725)
scaffold0122 (45-121)||(8002-8077)
[»] scaffold0025 (1 HSPs)
scaffold0025 (54-129)||(23753-23829)
[»] scaffold0227 (1 HSPs)
scaffold0227 (62-121)||(7319-7378)
[»] scaffold0123 (1 HSPs)
scaffold0123 (58-101)||(44529-44572)
[»] scaffold0024 (1 HSPs)
scaffold0024 (54-169)||(68242-68357)
[»] scaffold0246 (1 HSPs)
scaffold0246 (69-134)||(19555-19619)
[»] scaffold0361 (1 HSPs)
scaffold0361 (69-121)||(14522-14574)
[»] scaffold0066 (1 HSPs)
scaffold0066 (69-121)||(33378-33430)


Alignment Details
Target: chr5 (Bit Score: 358; Significance: 0; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 7 - 471
Target Start/End: Original strand, 16203748 - 16204220
Alignment:
Q  7 gaagcagagacactcctcggattaggcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaa 106  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  16203748 gaagcacagacactcctcggattaagcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattag 16203847  T
Q  107 cagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcatatctttgtgtttaactataaaaggcaaagattcacataa 206  Q
    |||||||||| ||| ||||||||||||  ||| ||||| ||||| ||||||     ||||||||||||||||||||||||||||||||||||||||||||    
T  16203848 cagtgtcggcatgttagtgtccgtgtcatgttcggtgtctgtgtctgtatc-----ttcatatctttgtgtttaactataaaaggcaaagattcacataa 16203942  T
Q  207 ggtggaaaatctttgacctttatttggtttattactgcatagggctgtattactaatttattattgtcccttcagttttatttttatcaag--------- 297  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||             
T  16203943 ggtggaaaatctttgacctttatttggtttattactgcgtagggctgtattactaatttactattgtcccttcagttttatttttatcaagactgtttta 16204042  T
Q  298 ----ccaaaattaatggttgaattttaaatactttcatacttccaagattttgaatagatgacatttttctgtgaagtagatgattaagtttgcaaattt 393  Q
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16204043 ggccccaaaattaatggttgaattttaaatactttcatacttccaagattttgaatagatgaaatttttctgtgaagtagatgattaagtttgcaaattt 16204142  T
Q  394 ggtatctcaccaatacatgtaaaggtccataaatgaagattttcacatgccaacttcagatgcagaggatacacaatt 471  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16204143 ggtatctcaccaatacatgtaaaggtccataaatgaagattttcacatgccaacttcagatgcagaggatacacaatt 16204220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 21191052 - 21191136
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||| | |||||||||| ||||||| |||||| ||||||||||| | |||||||| |||||||||||||||||    
T  21191052 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcg 21191136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 28588663 - 28588742
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtca 122  Q
    |||||| |||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||| | ||||||||||||||    
T  28588663 tgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 14674323 - 14674249
Alignment:
Q  59 ccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||| | |||||||||||||||||| |||||| ||||||||||| | |||||||||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 6247725 - 6247609
Alignment:
Q  7 gaagcagagacactcctcggattaggcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaa 106  Q
    |||||| ||||||| ||||||||||| |||| |||   || | |||||||||||||||| | |||||||||| ||||||| |||||| |||||||||||     
T  6247725 gaagcacagacacttctcggattaggtgtgtcccg---tgccgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 6247629  T
Q  107 cagtgtcggcgtgtcagtgt 126  Q
      ||||||||||||||||||    
T  6247628 atgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 11685998 - 11685925
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||||||| | |||||||| ||||||||||    
T  11685998 cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 19552562 - 19552658
Alignment:
Q  73 tacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcatat 169  Q
    |||||| ||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||   ||||||||||  | |||||||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggtggccgtgtttgtatatgggcttcatat 19552658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 27144515 - 27144443
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||||||||||||||||| |||||  ||||||||||| | ||||||||||||||||||| |||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 36642763 - 36642842
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||| |||| |||||||||| ||||  | ||| ||||||||||||| ||||||||||||||||||||||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcg 36642842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 3966562 - 3966488
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    ||||||||||||||||||||||||| |||| || |||||| ||||||||||| | |||||||| |||||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 19579760 - 19579682
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||||||||| | ||||| |||||||||||| |||||| ||||||||||| | |||||||||| |||||||||||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 24906264 - 24906415
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcg 114  Q
    ||||||||||| ||||||||||| ||  | |||| ||||||| |||||||| | |||||||||| |||||||  ||||| ||||||||||| | |||| |    
T  24906264 gacactcctcgaattaggcgtgt-cctat-tgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttg 24906361  T
Q  115 gcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
    |||||||||||| ||||||| ||  |||| | |||| |||||| ||| ||||||    
T  24906362 gcgtgtcagtgttcgtgtcgtgtccggtgctcgtgtctgtatcggtgtttcata 24906415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 43564949 - 43564863
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||  |||||||| |   |||||||||||||||||| ||||||    
T  43564949 tgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttccaaattatga--tgtgtcggcgtgtcagtgttcgtgtc 43564863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 22013460 - 22013393
Alignment:
Q  67 tataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||||||||  |||||  |||||||||| | ||||||||||||||||||||||||||    
T  22013460 tataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcg 22013393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 30502377 - 30502500
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggt 142  Q
    |||||| ||||||||||||||||||||||||||||| ||||| | |||||| ||||||||||| | ||||  | || |||| ||  ||| || ||  |||    
T  30502377 tgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtttgggtttcagcgtatgtgacgtgtccggt 30502476  T
Q  143 gtttgtgtttgtatccgtgcttca 166  Q
    ||  ||||||||||||||||||||    
T  30502477 gtccgtgtttgtatccgtgcttca 30502500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 30542720 - 30542843
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggt 142  Q
    |||||| ||||||||||||||||||||||||||||| ||||| | |||||| ||||||||||| | ||||  | || |||| ||  ||| || ||  |||    
T  30542720 tgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtttgggtttcagcgtatgtgacgtgtccggt 30542819  T
Q  143 gtttgtgtttgtatccgtgcttca 166  Q
    ||  ||||||||||||||||||||    
T  30542820 gtccgtgtttgtatccgtgcttca 30542843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 13287399 - 13287509
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| | || ||||||| ||||||| |||||| ||||||||||| | |||||| ||||| ||||||||||||| ||  |||||  ||||  |    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccg 13287498  T
Q  154 tatccgtgctt 164  Q
    |||||||||||    
T  13287499 tatccgtgctt 13287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 21522809 - 21522695
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||  | |||||||||| |||||||  ||||| | ||||||||| | |||||||||||||||||||||||||| ||  ||||   ||||  |    
T  21522809 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21522710  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  21522709 tatccgtgcttcata 21522695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 21533375 - 21533261
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||  | |||||||||| |||||||  ||||| | ||||||||| | |||||||||||||||||||||||||| ||  ||||   ||||  |    
T  21533375 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21533276  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  21533275 tatccgtgcttcata 21533261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 33178088 - 33178014
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagt 124  Q
    |||||||||||||||| | |||||||||||||||||| |||||| | |||||||||   ||||||||||||||||    
T  33178088 tgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 6770643 - 6770488
Alignment:
Q  15 gacactcctcggattaggcgtgtaccgg----tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagt 110  Q
    ||||||| |||||||||||||||||| |    |||||| |||||||||| ||||||||  | |||||| ||||||| |||||| | |||||||||   ||    
T  6770643 gacactcttcggattaggcgtgtaccaggacatgtgtcgtgtccgacactgacacata--agtacactgaattatgtgattttcttaaattattagttgt 6770546  T
Q  111 gtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
    ||| | |||||||||||||||||  ||| |||||  || |  ||||||||||||||||    
T  6770545 gtcagtgtgtcagtgtccgtgtcatgttcggtgtccgtatccgtatccgtgcttcata 6770488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 19820392 - 19820474
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||| |||||||  ||| ||||||||  |||| ||||||||||| | ||||||| ||||||||||||||||||    
T  19820392 tgtccgacaccgacacttataattgtacttaattatga--ttttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcg 19820474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 21576735 - 21576824
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| ||||||||| |||||| | |||||||||| ||||||| |||||| ||||||||||| | |||| ||||| ||||||| ||||||    
T  21576735 gtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtc 21576824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 23221046 - 23220973
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcag 123  Q
    ||||| |||||||||||||| || ||||||||||||| |||||||||||||||||| | |||||| | ||||||    
T  23221046 tgtccaacaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 7175026 - 7175098
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||||||  | |||||||| |||||| ||||||||||||| ||||||  |||||||||||||||||    
T  7175026 gacacatataattatgccaaattatgtgattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 15884085 - 15884008
Alignment:
Q  14 agacactcctcggattaggcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagatttt 93  Q
    |||||||||||||||||||||||| || ||||  | |||||||||||||||| | |||||||||| ||||||| ||||||    
T  15884085 agacactcctcggattaggcgtgttccagtgt--cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 15884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 23012397 - 23012480
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||  |||||| ||||||||||| || |||||| |||||| ||||    
T  23012397 tgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagca-tgtcggtgtgtcaatgtc 23012480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 39698600 - 39698524
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||| ||||| | |||||||||| ||||||| |||||| ||||||||||| | ||||| ||||||||||||||||    
T  39698600 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 36838602 - 36838551
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  36838602 cgacaccgacacatataattacactaaattatgtaattttctcaaattatta 36838551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 6401557 - 6401443
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||||||||||||||||  ||| || |||||| | |||   |||   ||||||||||||| |||||||||||| ||  |||||  |||| ||    
T  6401557 cgacaccgacacatataattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtcgcgtccggtgtccgtgtctg 6401458  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  6401457 tatccgtgcttcata 6401443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 15382539 - 15382422
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttat--caaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgt 150  Q
    ||||||||||||| | |||||| ||| ||||||  |||||| |  |||||||||| | |||||||||||||| ||||||||||| ||  |||||  ||||    
T  15382539 ccgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgt 15382440  T
Q  151 ttgtatccgtgcttcata 168  Q
      ||||||||||||||||    
T  15382439 ccgtatccgtgcttcata 15382422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 18421830 - 18421900
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    |||||| |||||||| ||||||||||||||||||||  |||||| |||||| ||||||||| | |||||||    
T  18421830 tgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattatcagcagtgtc 18421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 144
Target Start/End: Original strand, 37328844 - 37328934
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    |||||||||||||| |||||||||| |||| || ||||||  |||||||||  | ||||||| || ||||||||||||||| ||| |||||    
T  37328844 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcggtgt 37328934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 2436981 - 2436908
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||||||||||| |||   ||||||| ||||||  |||||||||| | |||||||||||||||||||    
T  2436981 cgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 19429491 - 19429418
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| ||||||| ||| ||||||||| ||||| |||||| |||||||||||||| ||||||| ||||| ||||    
T  19429491 cgacagcgacacagatatttacactaagttatgtgattttctcaaattattaacattgtcggcatgtcaatgtc 19429418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 31084382 - 31084309
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| |||||| | |||||||| | ||||||| |||||| ||||||||||| | |||||||||||||||||||    
T  31084382 cgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 39205939 - 39205866
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||| ||||||||||||||||  ||||||  |||||| ||||||||||| |||||||| |||||| |||||    
T  39205939 cgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccgtgtc 39205866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 6326293 - 6326377
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||| | ||||| | |||||||||| |||||||  ||||| |||||||| || |  |||||||||||||||||||||||||    
T  6326293 tgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcg 6326377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 14873575 - 14873527
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattat 103  Q
    |||||||||||||||||||||||||||||||| | |||| |||||||||    
T  14873575 gacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 17177025 - 17177137
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgta 155  Q
    |||||||||| | |||||||| | |||| |  |||||| ||||||||||| | |||| ||||| |||||||||| ||||  | |||||| |||||  |||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgtctgtgtccgta 17177124  T
Q  156 tccgtgcttcata 168  Q
    |||||||||||||    
T  17177125 tccgtgcttcata 17177137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 19168828 - 19168900
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||| |||||||| ||| ||| ||||||||||||||| || | |||| || |||||||||||||||||    
T  19168828 gacacatatgattacactgaataatgtgattttatcaaattaatagcggtgtaggtgtgtcagtgtccgtgtc 19168900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 22423812 - 22423892
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||| ||||||||| | | ||||||| |||||| |||||||||||  |||||| | |||||||| |||||||||    
T  22423812 cgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcg 22423892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 40000555 - 40000615
Alignment:
Q  74 acactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| ||||||| |||||| |||||||||||| ||||||| | |||||||||||||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcg 40000615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 43001844 - 43001780
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| |||||||  ||||| ||||||||||| |||||||| | ||||||||||||||||    
T  43001844 taattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 5467984 - 5468051
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| |||||||||||| ||||||| |||||||||||||||||| | || | | ||||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattattatcggtattgacgtgtcagtgtc 5468051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 6035592 - 6035469
Alignment:
Q  9 agcagagacactcctcggattaggcgtgtaccggtgtgtcttgtc-------cgacaccgacacatataattacactaaattatgagattttatcaaatt 101  Q
    |||| ||||||||||| |||||||||||| |||| |||||| |||       ||||||||||| ||||||||||||| ||||||   ||||  |||||||    
T  6035592 agcacagacactcctcagattaggcgtgtcccggcgtgtct-gtcaccgacacgacaccgacaaatataattacactgaattatattatttc-tcaaatt 6035495  T
Q  102 attaacagtgtcggcgtgtcagtgtc 127  Q
    |||| | |||||||||||||||||||    
T  6035494 attagcggtgtcggcgtgtcagtgtc 6035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 6471889 - 6471940
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||| ||||||||||||||||| ||||||| |||||| |||||||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 12927723 - 12927640
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| |||| ||||| |||| ||||||||||||||||||||  |||||| ||||||||||| |  |||||| ||||| |||||    
T  12927723 gtgtcatgtctgacactgacatatataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtccgtgtc 12927640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 30098381 - 30098310
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccg 129  Q
    |||||||  |||||||||| | ||||||| |||||| ||||||||||||| || ||| ||||||||||||||    
T  30098381 accgacatctataattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 41091257 - 41091316
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||| ||||||||||||||||||| ||||||| |||||| |||||| |||| |||||||    
T  41091257 cgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 8420089 - 8420011
Alignment:
Q  51 gtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccg 129  Q
    ||||||||||||||| | |||||||| | |||||||  ||||| ||||||||||| |  ||||||||||||| ||||||    
T  8420089 gtccgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccg 8420011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 15410450 - 15410528
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| |||||||| |||||||| ||| ||   ||||| | ||||||||| | ||||||||||||||||||||||||||    
T  15410450 acaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcg 15410528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 17123111 - 17123033
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    ||||| ||||||||| ||||||||  |||  |||||| |||||| ||||||||||| | |||| |||||||||||||||    
T  17123111 tgtccaacaccgacatatataattgtacttgattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtcc 17123033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 35017085 - 35016987
Alignment:
Q  65 catataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgct 163  Q
    |||||||||||||||||||||| |||||| |||||||||||   || |||||||||| |||| | | ||| || ||||||  |||| | ||||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattagtggtttcggcgtgtcggtgttcatatcgtgtatggtgtccgtgtctatatccgtgct 35016987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 42029822 - 42029744
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||| ||||||||||||| ||||||||||||| | ||||||| |||||| | || || ||||  |||||||||||||    
T  42029822 tgtgtcgtgtccgacaccgatacatataattacattgaattatgtgattttctaaattttttaattgtgtcggcgtgtc 42029744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 42893423 - 42893345
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    |||| ||||||||||| | ||||||||||  |||||| |||||| ||||||||||| | ||||||| ||||| ||||||    
T  42893423 tgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtcc 42893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 9449521 - 9449448
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||| ||||| | ||||||| |||||| |||||||||||   ||||||||||| ||||||||||||||    
T  9449521 gacacaaatagttacattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtcg 9449448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 16734927 - 16734847
Alignment:
Q  54 cgacaccgacacatataattacac--taaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    ||||||||||||||||||||||||  |  |||||   ||||| | ||||||||||| |||||||||||| |||||||||||    
T  16734927 cgacaccgacacatataattacacacttgattatataattttcttaaattattaacggtgtcggcgtgttagtgtccgtgt 16734847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 42469263 - 42469190
Alignment:
Q  71 attacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    ||||||||||| ||||  ||||| ||||||||||| | |||||||||||||| | ||||||||| ||| |||||    
T  42469263 attacactaaaatatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgt 42469190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 26312832 - 26312748
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||| ||||||||||||||| |||||   |||||| ||||||||||  | || ||||| | ||||||||| |||||    
T  26312832 tgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtccatgtcg 26312748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 28262408 - 28262500
Alignment:
Q  66 atataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatcc 158  Q
    |||||||||| |||||||||| |||||| ||||||||| |||  | | ||||||||||| ||||||| |  | ||||||  ||||||||||||    
T  28262408 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtatccgtgttgtatctggtgtcggtgtttgtatcc 28262500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 2577178 - 2577241
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    ||||||||||  |||||| ||||||||||||||||  ||||| ||||||||||| | |||||||    
T  2577178 tccgacaccggaacatatgattacactaaattatgtcattttctcaaattattatcggtgtcgg 2577241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 19737484 - 19737558
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||||||| ||| || | |||||||  ||||| ||||||||||| | || || ||||||||||||||||    
T  19737484 acaccgacacatatgattgcattgaattatgtaattttctcaaattattatcggtttcagcgtgtcagtgtccgt 19737558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 24273039 - 24273089
Alignment:
Q  63 cacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    |||||||||||||||| ||||||| |||||| |||||||| |||| |||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaattaataactgtgtc 24273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 24389175 - 24389125
Alignment:
Q  63 cacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    |||||||||||||||| ||||||| |||||| |||||||| |||| |||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaattaataactgtgtc 24389125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 32630733 - 32630803
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtca 122  Q
    |||||||| |||||||||||||||| | ||||||   ||||| ||||||||||| | ||||| ||||||||    
T  32630733 tccgacactgacacatataattacattgaattatataattttctcaaattattatcggtgtcagcgtgtca 32630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 7677764 - 7677703
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    |||||||||||| | ||||| |||| ||||||| |||||| ||||||||||| | |||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 14422965 - 14422883
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||| ||| || |||||||||||| ||||||| |||||  | ||||||||| | || |||| |||||||||||| |||||    
T  14422965 tgtccgacatcgaaacttataattacactgaattatgtgattt--ttaaattattagctgtatcggtgtgtcagtgtccttgtcg 14422883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 21351906 - 21351979
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    ||||||||||| | |||||||||| ||||||| || ||| || ||||||||   ||||||| ||||||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 41995515 - 41995450
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||| | ||||||| |||||| || ||||||||   ||||||||||||||||||| ||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcg 41995450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 7997163 - 7997238
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||||||| ||||| ||||||||||||  |||||   ||||| ||||||||||| | |||| |||||||||||||    
T  7997163 tgtccgacac-gacacttataattacactgtattatatcattttctcaaattattatccgtgttggcgtgtcagtgt 7997238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 12641717 - 12641657
Alignment:
Q  70 aattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    ||||| ||||||||||| |||||| | |||||||||||  ||||| ||||||| |||||||    
T  12641717 aattatactaaattatgtgatttttttaaattattaactatgtcgacgtgtcattgtccgt 12641657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 15086534 - 15086482
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaatta 102  Q
    |||| |||||||||||||||||||||| || |||||  |||||| ||||||||    
T  15086534 tgtcagacaccgacacatataattacattacattatatgattttctcaaatta 15086482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 26609408 - 26609344
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtca 122  Q
    ||||||||| ||| || |||||||| ||| ||||||||||||||||||   ||||||| ||||||    
T  26609408 accgacacaaatagttgcactaaatcatgtgattttatcaaattattagtggtgtcggtgtgtca 26609344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 6e-32; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 25093565 - 25093447
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    ||||||||||||||||||||||||||||| |||| || |||||| |||||| ||||||||||||||||||| |||||| |||||| ||  ||||| ||||    
T  25093565 tgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgtg 25093466  T
Q  150 tttgtatccgtgcttcata 168  Q
    ||||||||||| |||||||    
T  25093465 tttgtatccgtacttcata 25093447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 10268482 - 10268600
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||| ||||| ||||| | |||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||   | | |||  |||    
T  10268482 tgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgtaatcgatgtccgtg 10268581  T
Q  150 tttgtatccgtgcttcata 168  Q
    || ||||||||||||||||    
T  10268582 ttcgtatccgtgcttcata 10268600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 28678362 - 28678248
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||  ||||| |||| ||||||||||  |    
T  28678362 cgacaccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagtgtctatgtcgtgtttagtgtttgtgtccg 28678263  T
Q  154 tatccgtgcttcata 168  Q
    |||  ||||||||||    
T  28678262 tatttgtgcttcata 28678248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 55401144 - 55401054
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| |||||||||||||||| | |||||||||||||||||| |||||| |||||||||||   |||||||||| |||||||||||||||    
T  55401144 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcg 55401054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 8383320 - 8383236
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||| |||||||||||| ||||||  |||||| ||||||||||| | |||||||||||||| |||||||||||    
T  8383320 tgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcg 8383236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 168
Target Start/End: Original strand, 10335276 - 10335400
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtg 143  Q
    ||||| || ||||||||||||| | || |||||||||| |||| || ||| |||||||||||   |||||||||||||||||||||||||| ||  ||||    
T  10335276 gtgtcgtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtg 10335375  T
Q  144 tttgtgtttgtatccgtgcttcata 168  Q
    |  ||||| ||||||||||||||||    
T  10335376 tccgtgttcgtatccgtgcttcata 10335400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 24205038 - 24205155
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||||||||| ||||| ||||||||||||  ||||||  ||||| ||||||||||| | |||||||||||||||||||||||||| ||  |||||  |||    
T  24205038 tgtccgacac-gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtg 24205136  T
Q  150 tttgtatccgtgcttcata 168  Q
    | ||| |||||||||||||    
T  24205137 tctgtgtccgtgcttcata 24205155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 32804547 - 32804620
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| |||||||| ||||| || ||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtcaatgcccgtgtcg 32804620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 49505150 - 49505230
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||| | || || ||||||| ||||||||    
T  49505150 tgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgtcggtgtccgt 49505230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 8587017 - 8587100
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||||||| | |||||||||| ||||||| |||||| |||||||| ||   |||||||||||||||||||||||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtc 8587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 15796294 - 15796408
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||  | |||||||||| ||||||  |||||| ||||||||||||| |||||||||||||| ||||||||||| ||  |||||  ||||       
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtcca 15796393  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  15796394 tatccgtgcttcata 15796408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 16000012 - 16000130
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||||||||||||||| | || ||||||| |||||||  ||||| | |||||||||   ||||||||||||||||||| |||||| ||| |||||  |||    
T  16000012 tgtccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtg 16000111  T
Q  150 tttgtatccgtgcttcata 168  Q
    |  ||||||||||||||||    
T  16000112 tccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 7928513 - 7928448
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| | |||||||    
T  7928513 tgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 10955021 - 10954932
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| |||||||||||||||| | | |||||||| ||||||| |||||| |||||||||||   |||||||||||||||||| ||||||    
T  10955021 gtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtc 10954932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 8789538 - 8789622
Alignment:
Q  42 gtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||| |||||| ||||||||| | | ||||||| ||||| ||||    
T  8789538 gtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtgtctgtgt 8789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 11666003 - 11665931
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||| |  |||||| |||| |||||    
T  11666003 cgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgt 11665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 28918060 - 28917980
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | |||||||||| ||||||| |||||| ||||||||||| |  ||||||||||||||| |||||||||    
T  28918060 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcg 28917980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 21720807 - 21720744
Alignment:
Q  70 aattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||| ||||||||||| || ||||||||||| | |||||||||||||||||||||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtgtc 21720744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 25948887 - 25948966
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||| |||| |||||||||||| ||||||| |||||| ||||||||||| | || ||||| ||||||||||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 26492194 - 26492285
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||||||||||| || | |||||||||| |||| |  |||||| ||||||||||| |  |||||||||||||||||||||||||    
T  26492194 tgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcg 26492285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 10318025 - 10318113
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| || ||||||||||||| |||| ||||||||||  ||| || ||| ||||||||||| | |||||||||||||||||||||||||    
T  10318025 gtgtcgtgcccgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 10318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 11313808 - 11313861
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 11658868 - 11658764
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccg 159  Q
    ||||||||||||| ||||| ||||||| |||||| |||||||||||||  ||| || ||||||||||| |||||| | |  |||| |||||| |||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtg-tccgtgtctgtgttcgtatccg 11658770  T
Q  160 tgcttc 165  Q
    ||||||    
T  11658769 tgcttc 11658764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 3164043 - 3164139
Alignment:
Q  72 ttacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
    ||||||| ||||||| |||||| ||||||||||| | |||||| |||| || ||||||||||| ||  |||||  |||| |||||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcata 3164139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 25775572 - 25775493
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagatt-ttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    |||||||||||||||| | |||||||||| ||||||| |||| || ||||||||||||  |||| |||||||||||||||    
T  25775572 tgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 40993287 - 40993374
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgt---------gtcttgtccgacaccgacacatataattacactaaattatgagatttt 93  Q
    ||||||||||||||||||||||| |||||||         ||| ||||||||||||||||||||||||||||| ||||||| ||||||    
T  40993287 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 168
Target Start/End: Complemental strand, 4469897 - 4469795
Alignment:
Q  66 atataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttc 165  Q
    ||||| ||||||| ||||||| |||||| | ||||||||  | || | ||||||||| |||| |||||  ||| ||||||||||| ||||||||||||||    
T  4469897 atatacttacactgaattatgtgattttcttaaattattggcggtattggcgtgtcaatgtctgtgtcttgttaggtgtttgtgtctgtatccgtgcttc 4469798  T
Q  166 ata 168  Q
    |||    
T  4469797 ata 4469795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 18427010 - 18426932
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    ||||||||||||| ||||||||||||  ||||||| |||||| | |||||||||   ||||||||||||| ||||||||    
T  18427010 tccgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtccgt 18426932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 21479178 - 21479104
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||||||   |||||||||| |||| || |||||| ||||||||||| | |||||||||||||||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 25064954 - 25064888
Alignment:
Q  68 ataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||||||| |||||| |||||| |||| | |||||||||||||| |||| ||||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcg 25064888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 4987306 - 4987363
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||||||| ||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 20503572 - 20503451
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgt---------gtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||| |||||||         ||| ||||| |||||||||| | |||||||||| |||||||  ||||| ||||||||||     
T  20503572 gacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaattattt 20503473  T
Q  106 acagtgtcggcgtgtcagtgtc 127  Q
       |||||||||||||||||||    
T  20503472 gttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 26290430 - 26290357
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| |||||||||||||| ||  || |||| |||||| ||||||||||||  |||||||||||||||||||    
T  26290430 cgacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtcggcgtgtcagtgtc 26290357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 45451623 - 45451554
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgt 112  Q
    |||||| |||||||||||||||||||| |||| ||| || |||| |||||| ||||||||||| ||||||    
T  45451623 tgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgt 45451554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 1514671 - 1514603
Alignment:
Q  59 ccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||| |||||||||||||||||||| | || | ||||||||||| | ||||||||||||| |||||    
T  1514671 ccgacacttataattacactaaattatgcgtttctttcaaattattagcggtgtcggcgtgtccgtgtc 1514603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 168
Target Start/End: Complemental strand, 7171570 - 7171447
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtg 143  Q
    ||||| ||||||||||| |||| | |||||||||  ||||||  |||||| ||||||||  | | |||||||| ||||||| ||||||||| ||  ||||    
T  7171570 gtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgatttt-tcaaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccggtg 7171472  T
Q  144 tttgtgtttgtatccgtgcttcata 168  Q
    | |||||  ||||||||||||||||    
T  7171471 tctgtgtccgtatccgtgcttcata 7171447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 8039835 - 8039903
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtca 122  Q
    ||||||||||||||||||||||||| ||||||   ||||| ||||||||||| | |||| |||||||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 9800099 - 9800019
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| || ||||||||  |||||||  ||||| |||||||||||   |||||||||||||||||| |||||||    
T  9800099 cgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcg 9800019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 15314876 - 15314924
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaatta 102  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  15314876 cgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 20691382 - 20691306
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||| ||||||||||||||| |||||||| |||||||  ||||| ||||||||||| |||| ||  |||||||||||    
T  20691382 tgtctgacaccgacacatatgattacactgaattatgtcattttctcaaattattatcagtttctacgtgtcagtgt 20691306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 1509598 - 1509547
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||| | |||||||||||||||||| |||||| |||||||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 1509547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 168
Target Start/End: Complemental strand, 3610677 - 3610578
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
    |||||||||| | |||||  ||||| | ||||||||||| |||| |||||||||||||| |||||| ||  |||||| |||  ||||| |||||||||||    
T  3610677 taattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtccggtgttcgtggatgtattcgtgcttcata 3610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 8842399 - 8842309
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| |||| |||||||||| |||||||||||| |||||||| ||||||   ||||||||| | |||||||| ||||| | |||||||||    
T  8842399 tgtgtcgtgtctgacaccgacatatataattacaccaaattatgtgatttt-caaaattattagcggtgtcggcatgtcaatttccgtgtcg 8842309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 12674504 - 12674597
Alignment:
Q  60 cgacacatataattacactaaattatga---gattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgt 150  Q
    ||||||||  ||||||||| |||||| |   |||||| ||||||||||| ||||||||| |||||| ||||||||||| || |||||| |||||    
T  12674504 cgacacatgcaattacactgaattattatttgattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtctggtgtctgtgt 12674597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 14747606 - 14747547
Alignment:
Q  69 taattacactaaattatgagattttat-caaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||||||||||| |||||| | |||||||||| | |||||||||||||||||||    
T  14747606 taattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 14829748 - 14829670
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||| | |||||||  | ||||||| |||||| ||||||||||| | ||||||||||||||||||| |||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 16192758 - 16192817
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    ||||||||||||||||| |||||||  ||||| ||||||||||||| ||||||| |||||    
T  16192758 acacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtc 16192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 26508166 - 26508099
Alignment:
Q  57 caccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagt 124  Q
    ||||||||| | |||||||||| ||||||| |||||| ||||||||||| | ||||| ||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagt 26508099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 35223007 - 35222924
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| |||||| | ||| | |||   ||||||||||||| |||||    
T  35223007 gtgtcatgtccgacaccgacacatataattacattgaattatgtgattttctaaaaatgttagttgtgtcggcgtgtctgtgtc 35222924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 4201459 - 4201397
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgt 112  Q
    |||| |||||| ||| ||||||||||||| ||||||| |||||| ||||||||||||| ||||    
T  4201459 tgtcggacaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 5339149 - 5339091
Alignment:
Q  72 ttacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    ||||| ||||||||| |||||| |||||||||||||| |||||||||||| || |||||    
T  5339149 ttacattaaattatgtgattttctcaaattattaacaatgtcggcgtgtctgtatccgt 5339091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 10455849 - 10455735
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    ||||||| ||||||||||||||||| | ||||  |||||| ||| ||||||| |||||| ||||||||| || | |||||| ||   ||||  |||| |     
T  10455849 cgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtcaatgcctgtgtcgtgtccagtgtccgtgtcta 10455750  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  10455749 tatccgtgcttcata 10455735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 25652039 - 25652129
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgttt 152  Q
    |||| ||||| |||||| ||||||   ||||| ||||||||||| | |||| ||||||| ||||||||||||| || ||||||| ||||||    
T  25652039 acacctataactacactgaattatatcattttctcaaattattatccgtgttggcgtgttagtgtccgtgtcgtgtctggtgttcgtgttt 25652129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 35994735 - 35994851
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||||||||| ||||| | |||||||||| ||||||| |||||| ||||||||||| | |||||||| ||||| ||||| ||||| ||  |||||   ||    
T  35994735 tgtccgacac-gacacttgtaattacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatg 35994832  T
Q  150 tttgtatccgtgcttcata 168  Q
    |  ||||||||||||||||    
T  35994833 tccgtatccgtgcttcata 35994851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 48202270 - 48202344
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccg 129  Q
    ||||| |||||||||||||||| ||||||||| |||||| ||||| |||||    ||||||||||||| ||||||    
T  48202270 gacacagacacatataattacattaaattatgtgattttctcaaactattatggatgtcggcgtgtcaatgtccg 48202344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 7614415 - 7614476
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    ||||||||||| ||||||||| ||| ||||||| |||||| | ||||||||||| |||||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcgg 7614476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 11493372 - 11493441
Alignment:
Q  65 catataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||| ||||||| |||||| ||| |||||||   |||||| ||||||| |||||||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtcg 11493441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 17005621 - 17005670
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||| |||||||||||| ||||||  ||||||||||||||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 24633391 - 24633460
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||| ||||| ||||||||||||||||||||| | ||||| | ||||||  |||||||||||| |||||    
T  24633391 gtgtcgtgtccaacaccgacacatataattacattgaattacgtgatttttccaaattattaactgtgtc 24633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 27277852 - 27277897
Alignment:
Q  68 ataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 34185123 - 34185196
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||||| | |||||||||| |||| || |||||| | ||||||||| | |||||||||||||| ||||    
T  34185123 cgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtcactgtc 34185196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 39756295 - 39756222
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||||| | |||||| | ||||||||| |||||| | ||||||||||   ||||||||||||||||||    
T  39756295 cgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtc 39756222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 55213020 - 55212943
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| | ||||| |||||||||||| |||||| | ||||||||||| |||||||| | ||| |||| |||||    
T  55213020 acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcggcatatcactgtctgtgtc 55212943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 14979224 - 14979160
Alignment:
Q  70 aattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||| ||||||| |||||| ||||||||||| | ||||||||||| || ||||| |||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcg 14979160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 168
Target Start/End: Original strand, 34307786 - 34307894
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccg 159  Q
    |||||| |||||||||||| || |||| |||||| ||||||||||| | ||||| ||||||  ||||| |||||  ||  |||||| ||||  ||||||     
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatcca 34307885  T
Q  160 tgcttcata 168  Q
    |||||||||    
T  34307886 tgcttcata 34307894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 38731278 - 38731226
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||| |||||| ||||||| |||||| | |||||||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttttaaaattatta 38731226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 3865592 - 3865635
Alignment:
Q  90 ttttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||| ||||||||||| | |||||||||||||||||||||||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 3865635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 14840304 - 14840371
Alignment:
Q  67 tataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| ||||||| |||||| | ||||||||||  |||| |||||||| || |||||||||    
T  14840304 tataattacactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtgtcg 14840371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 15864895 - 15864825
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||||||| ||||| ||| |||||||||||||||   ||||| ||||||||||| | |||||||||||||    
T  15864895 tgtccgacac-gacacctatgattacactaaattatatcattttttcaaattattatccgtgtcggcgtgtc 15864825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 34910376 - 34910309
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||||||| | | |||||||||| ||||||| |||||| |||||||||||   |||||||||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 40052365 - 40052318
Alignment:
Q  80 aattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||| |||||| ||||||||||| | |||||||||||||||||||    
T  40052365 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 49651786 - 49651853
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||||||||| | |||||||| | ||||||| |||||| ||||||||||| | |||||||| ||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 51206349 - 51206404
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||| | || ||||||| ||||||| |||||| |||||||||||    
T  51206349 tgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattatta 51206404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 2620071 - 2620133
Alignment:
Q  72 ttacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||| ||||||| |||||| |||||| ||||   ||||||||||||||||||||| ||||    
T  2620071 ttacacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcg 2620133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 78
Target Start/End: Complemental strand, 2941627 - 2941593
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacact 78  Q
    ||||| |||||||||||||||||||||||||||||    
T  2941627 gtgtcgtgtccgacaccgacacatataattacact 2941593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 13807227 - 13807149
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||||||| |||| | | ||||||| |||||| ||||||| ||| |||||| ||||||| ||| | ||||||    
T  13807227 gacaccgacacatattattatattgaattatgtgattttctcaaattgttatcagtgttggcgtgttagttttcgtgtc 13807149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 33359823 - 33359741
Alignment:
Q  51 gtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||| ||||| | || |||||||||| |||| ||  || ||||||||||| | ||||| ||||||||||||| |||||    
T  33359823 gtccgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtgtctgtgtc 33359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 144
Target Start/End: Complemental strand, 39002091 - 39002001
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    |||||| |||| ||||||||||| | ||||||| |||||| |||||||  || |  |||||| |||||||||| ||||||| ||| |||||    
T  39002091 cgacactgacatatataattacattgaattatgtgattttttcaaattcctatccatgtcggtgtgtcagtgtacgtgtcgtgttcggtgt 39002001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 12704056 - 12703999
Alignment:
Q  64 acatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    ||||||||||||||| ||||||| | |||| |||||||||||   |||||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 15544744 - 15544679
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| ||||||| ||  ||||||| |||||||||||||||||| | |||||  ||||||||||||    
T  15544744 acacacataattatacagaattatgtgattttatcaaattattagcggtgtcaacgtgtcagtgtc 15544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 29508497 - 29508452
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||| ||||||  |||||| |||||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattatta 29508452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 5407260 - 5407324
Alignment:
Q  67 tataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtg 131  Q
    |||||||||| | ||||||| |||||| ||||||| ||| | ||||||||||||| || ||||||    
T  5407260 tataattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtg 5407324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 9624689 - 9624641
Alignment:
Q  65 catataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    |||||||||||| | ||||||| |||||| ||||||||||| |||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtc 9624641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 11252039 - 11251986
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||| ||||||||||||||  |||||||| ||||||| |||||| |||||||||||    
T  11252039 tgtctgacaccgacacata--attacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 78
Target Start/End: Original strand, 13845521 - 13845549
Alignment:
Q  50 tgtccgacaccgacacatataattacact 78  Q
    |||||||||||||||||||||||||||||    
T  13845521 tgtccgacaccgacacatataattacact 13845549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 14216951 - 14216871
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||| | |||||||||| ||||||  ||| || | |||||||||   |||||| |||||||||||||||||||    
T  14216951 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcg 14216871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 14223080 - 14223000
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||| | |||||||||| ||||||  ||| || | |||||||||   |||||| |||||||||||||||||||    
T  14223080 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcg 14223000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 27505305 - 27505229
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||||| | |||||||||| ||||||| ||||||   ||||||||| | |||||||| |||| || |||||    
T  27505305 cgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcggcttgtccgtatccgt 27505229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 28812574 - 28812499
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||||| | ||| |||||| ||||||| |||||  |||||||||||   ||||||||||||| ||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc-gtgtccgt 28812499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 37077410 - 37077338
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||| ||| || | |||||||  || || ||||||||||| | |||||||||||||| ||||||||||    
T  37077410 gacacatatgattccattgaattatgttatattctcaaattattatcggtgtcggcgtgtcactgtccgtgtc 37077338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 41961650 - 41961730
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | |||||||||  ||| ||| ||| || |||||||||||   ||| ||||||||||||||| ||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcg 41961730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 9e-31; HSPs: 101)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 7086852 - 7086740
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgta 155  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| || |||||| ||||| |||||| || |||| ||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtatttgtgtttgta 7086753  T
Q  156 tccgtgcttcata 168  Q
    ||| |||||||||    
T  7086752 tccatgcttcata 7086740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 5732506 - 5732590
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||| |||||    
T  5732506 tgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcg 5732590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 426510 - 426628
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||||||||||||||| | |||||||| | ||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||  ||| |  |||    
T  426510 tgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtg 426609  T
Q  150 tttgtatccgtgcttcata 168  Q
    | ||||||| |||||||||    
T  426610 tctgtatccatgcttcata 426628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 7938179 - 7938061
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||| ||||||||||| |||||||||||||||||||  |||||| ||||||||||| | |||||||||||||||||||| ||||| ||  |||||  |||    
T  7938179 tgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtg 7938080  T
Q  150 tttgtatccgtgcttcata 168  Q
    |  ||||||||||||||||    
T  7938079 tccgtatccgtgcttcata 7938061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 8805576 - 8805686
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgta 155  Q
    |||||||||||||  |||||||||||||||| |||||| ||||||||||| ||||| || |||||| ||||| |||||| || |||||||||||| ||||    
T  8805576 acaccgacacata--attacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgtttgtgtatgta 8805673  T
Q  156 tccgtgcttcata 168  Q
    ||| |||||||||    
T  8805674 tccatgcttcata 8805686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 17841580 - 17841668
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||| |||||||||||| ||| | |||||||||||||||||| |||||| ||||||||||| | |||||||||||||||||||||||||    
T  17841580 tgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 33001279 - 33001367
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||| || ||||||    
T  33001279 gtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgt 33001367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 7265589 - 7265668
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccg 129  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| | |||| ||||||||||||||||    
T  7265589 tgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 17341671 - 17341744
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcg 17341744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 19040422 - 19040341
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagt 124  Q
    |||||| |||||||||| |||||||||||||||||| ||||||| |||||| ||||||||||| | ||||||||||||||||    
T  19040422 tgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 9027237 - 9027157
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||||||||||||  ||||||| |||| | ||||||||||| | ||||||||||||||||||||||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcg 9027157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 16766756 - 16766641
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| | |||||||||| ||||||| |||||| ||||||||||| | |||||||||||||||||||| ||||| ||  |||||  ||||  |    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccg 16766657  T
Q  154 tatccgtgcttcatat 169  Q
    ||||| ||||||||||    
T  16766656 tatccatgcttcatat 16766641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 9107370 - 9107484
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| | |||||||||| |||| || |||||| ||||||||||| | |||||||||||| ||||||||||||| ||  |||||  ||||  |    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcag 9107469  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  9107470 tatccgtgcttcata 9107484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 9658936 - 9658858
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||| ||||||||||||| ||||||| |||||| | ||||||||| | ||||||||||||||||||||||||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcg 9658858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 34595203 - 34595113
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| |||||||||||||||| | |||||||||| ||||||| |||||| |||||||||||   |||||||||||||| |||||||||||    
T  34595203 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcg 34595113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 28152167 - 28152079
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| |||||||||||||||| | |||||||||| ||||||| |||||| ||||||||||| |  ||||||||||||||||||||||||    
T  28152167 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 44 - 168
Target Start/End: Original strand, 8776963 - 8777087
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtg 143  Q
    ||||| ||||||||||| |||| | |||||||||| |||| || |||||| |||||||||||   |||||||||||||||||||||||||| ||  | ||    
T  8776963 gtgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttg 8777062  T
Q  144 tttgtgtttgtatccgtgcttcata 168  Q
    |  ||||  ||||||||||||||||    
T  8777063 tccgtgtccgtatccgtgcttcata 8777087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 21924900 - 21924999
Alignment:
Q  12 agagacactcctcggattaggcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtg 111  Q
    |||||| ||||||||||||||||||| |||||||       |||||||||||||||||||||||||| ||||||  ||| || ||||||||||| |||||    
T  21924900 agagacgctcctcggattaggcgtgtcccggtgt-------ccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtg 21924992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 26178683 - 26178759
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||  |||| |||| ||||| |||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattagaagtgacggcttgtcaatgtccgtgt 26178759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 34073347 - 34073427
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||||||||| |  ||| ||| |||||||||||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcg 34073427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 7996378 - 7996457
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| |||||||||||||| ||||||  |||||| ||||||||||| |||||||||| ||||||||||| ||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtc 7996457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 8022423 - 8022344
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| |||||||||||||| ||||||  |||||| ||||||||||| |||||||||| ||||||||||| ||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtc 8022344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 677896 - 677818
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    ||||||| || ||||||| ||||||| |||||  |||||| ||||||||||||||||||||||||||||||||| ||||    
T  677896 cgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 10294166 - 10294052
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    ||||||||||||||||||||||| | || |||| |||| | ||||||||||| | || ||||| ||||||| ||||||||| ||  |||||| ||||  |    
T  10294166 cgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccg 10294067  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  10294066 tatccgtgcttcata 10294052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 10888982 - 10889088
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtg 161  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| | |||||   ||||| |||||||||||  ||||| |||  |||| || |||||||    
T  10888982 acacatataatcacactaaattatgtgattttatcaaattattagcggtgtctatgtgtcggtgtccgtgtcatgtttgatgtccgtgtctgcatccgtg 10889081  T
Q  162 cttcata 168  Q
    |||||||    
T  10889082 cttcata 10889088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 9629443 - 9629362
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||||||||||| | ||||||| |||||| ||||||||||  | |||||||||||||| | |||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcg 9629362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 20371104 - 20371189
Alignment:
Q  48 cttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| ||||||||||||||||||| ||| | | ||||| |||||| ||||||||||| | |||||||||||||| ||||||||||    
T  20371104 cttgttcgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 26562748 - 26562671
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtg 131  Q
    ||||| ||||||||||||||||||| ||||||| |||||| ||||||| ||| ||||||||||||||| |||| ||||    
T  26562748 cgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtg 26562671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 1681811 - 1681703
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccg 159  Q
    |||||| | |||||||||| ||||| | |||||| |||||||||||   |||||||||||| |||||  |||||| ||| ||||| ||||| ||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccg 1681712  T
Q  160 tgcttcata 168  Q
    |||||||||    
T  1681711 tgcttcata 1681703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 3209442 - 3209327
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgaga-ttttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtt 151  Q
    ||||||||||||| | |||| ||||||||||||| || |||| ||||||||||| | ||||||||||||| |||| ||||||| ||  |||||  |||||    
T  3209442 ccgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgt-cgtgtcgtgtccggtgtccgtgtt 3209344  T
Q  152 tgtatccgtgcttcata 168  Q
    |||||||||||| ||||    
T  3209343 tgtatccgtgctacata 3209327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 3398677 - 3398598
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||| || |||||||||||| ||||||  |||||| ||||||||||| | ||||||||||||||||||||||||||    
T  3398677 cgacaccgatacttataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcg 3398598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 7977826 - 7977910
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||| | |||||||||| |||||||  ||||| ||||||||||| | |||||||||||||||| ||| |||||    
T  7977826 tgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcg 7977910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 12696383 - 12696303
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||| | |||||||||| |||||||  ||||| ||||||||||| | ||||||||||||||||||||||||||    
T  12696383 cgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcg 12696303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 13851799 - 13851715
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| |||| ||||||||||||||||||| ||||| |  ||||| ||||||||||| | |||||| |||||||||||||||||||    
T  13851799 tgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcg 13851715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 31579216 - 31579305
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| |||||||||||||||||||  |||||||| ||||||| |||||| ||||||||||||| |||| || ||| |||||||| |||||    
T  31579216 tgtgtcgtgtccgacaccgacacata--attacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcg 31579305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 9025494 - 9025553
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 10842585 - 10842518
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||| | ||||||||||||| |||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtc 10842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 19044522 - 19044443
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||||| ||||| ||||||| ||| || |||||||||||   |||||||||||||||||||| |||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcg 19044443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 144
Target Start/End: Original strand, 8365519 - 8365609
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    |||||||||||| | |||||||||  ||||||| ||| || |||||||||||   |||||||||||||||||||||||||| || ||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgt 8365609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 21395308 - 21395421
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| | ||||||||||||||||||  ||||| ||||||||||| | |||| |||||||| |||||| ||||   |  ||||| ||||| ||    
T  21395308 cgacaccgacacttgtaattacactaaattatg-tattttctcaaattattagcggtgttggcgtgtcggtgtccatgtcatatccggtgtctgtgtctg 21395406  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  21395407 tatccgtgcttcata 21395421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 7378047 - 7377966
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||| ||||||| ||| | ||||||| ||||| ||||    
T  7378047 tgtcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcggggtgtctgtgt 7377966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 7930364 - 7930288
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||||| |  |||| |||||||||||| |||||| ||||||||||||  |||||||| |||||||||||||    
T  7930364 cgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 9195754 - 9195814
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcg 114  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||  |||||||    
T  9195754 cgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcg 9195814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 10770674 - 10770754
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | |||||||||| ||||||| |||||| |||||||||||   |||| ||||||||||||||| |||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcg 10770754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 24833243 - 24833306
Alignment:
Q  64 acatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||||||||||||||| |||||| | || ||||||  ||||||||||||||||||||    
T  24833243 acatataattacactaaattatgcgattttcttaacttattagtagtgtcggcgtgtcagtgtc 24833306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 32320669 - 32320740
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtg 125  Q
    ||||||||| ||||||||| ||| | ||||||| |||||||||||||||||||| ||||| |||| ||||||    
T  32320669 cgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtg 32320740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 34447360 - 34447436
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    ||||||||||||| |  |||||||||||||||  |||||||||||||||||||| |||| ||||||||| |||| ||||    
T  34447360 cgacaccgacacaaa--attacactaaattatatgattttatcaaattattaacggtgttggcgtgtcattgtctgtgt 34447436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 853857 - 853939
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||| | ||||| |||| ||||||| |||||| |||||||||||   |||||||||||||||  |||||||||    
T  853857 tccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcg 853939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 6389796 - 6389722
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||| |||||||||||||||   ||||| ||||||||||| | |||||||||||| |||||||||||||    
T  6389796 cgacacctatgattacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcg 6389722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 16833365 - 16833287
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||| | |||||||||| || |||| |||||| |||||||||||   ||||||||||||||||||| ||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcg 16833287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 24832641 - 24832596
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||    
T  24832641 cgacacatataattacactaaattataagattttctcaaattatta 24832596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 4878013 - 4877921
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgaga-ttttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| |||||||||||||||| | |||||| ||| ||||||| || |||| ||||||||||| | ||||||| |||||| | |||||||||    
T  4878013 tgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcg 4877921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 13364701 - 13364773
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtca 122  Q
    ||||| |||||||||||||| |||||||| ||||||  |||||| ||||||||| | |||||||||| |||||    
T  13364701 tgtccaacaccgacacatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 32299332 - 32299220
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgta 155  Q
    |||||||||| ||||| |||| | ||||||| |||||| ||||||||||| ||| || || |||||||| |  ||||   || |||||| ||||| ||||    
T  32299332 acaccgacacgtataactacattgaattatgtgattttctcaaattattatcagggttggtgtgtcagtatttgtgttatgtctggtgtctgtgtctgta 32299233  T
Q  156 tccgtgcttcata 168  Q
    |||||||||||||    
T  32299232 tccgtgcttcata 32299220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 403860 - 403915
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||| | || ||||||||||||||| |||||| |||||||||||    
T  403860 tgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 7151471 - 7151420
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||| ||||||||||||||||| ||||||| |||||| |||||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 9617493 - 9617442
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||| | ||||||| |||||| |||||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 17168469 - 17168536
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| ||| |||||||||||||||   ||||| ||||||||||| |||||| ||||||||||||||    
T  17168469 cgacacctattattacactaaattatatcattttctcaaattattatcagtgttggcgtgtcagtgtc 17168536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 30851669 - 30851597
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgt 118  Q
    ||||| ||||||||||||||||||||||||||| | |||  || |||||| | ||||||||| ||||||||||||    
T  30851669 gtgtcgtgtccgacaccgacacatataattacattgaat--tgtgattttcttaaattattagcagtgtcggcgt 30851597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 32978888 - 32978967
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgag-attttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||| |||||||||||||||| | |||||||||| ||||||| |  |||| ||||||||||| | |||||||||||||    
T  32978888 tgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtcggcgtgtc 32978967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 5970123 - 5970181
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||| ||||||| |||||| ||||||||||||| |||||| |||||| |||||    
T  5970123 taattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtc 5970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 6898277 - 6898355
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    |||||||||||||||| | |||||||||| |||||||  ||||  |||||||||||   ||||| ||||||||||||||    
T  6898277 tgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtcc 6898355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 18367895 - 18367782
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||||||||||||||||  ||| || |||||| | |||  |||| | ||||||||||||| |||||| ||||| ||  |||||  ||||  |    
T  18367895 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc-gtgtccatgtcgtgtccggtgtccgtgtccg 18367797  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  18367796 tatccgtgcttcata 18367782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 24115847 - 24115961
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    ||||||| ||| ||||||||| | | ||||||| |||||| | |||||||||   ||||| ||||||||||| |  ||||| ||| ||||| ||||| ||    
T  24115847 cgacaccaacatatataattatattgaattatgtgattttttgaaattattagttgtgtcagcgtgtcagtgcctatgtcgtgttcggtgtctgtgtctg 24115946  T
Q  154 tatccgtgcttcata 168  Q
    ||||||| |||||||    
T  24115947 tatccgtacttcata 24115961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 30866149 - 30866223
Alignment:
Q  59 ccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||||||||| | ||||||| |||||| ||||||||||| | |||| || ||||| ||||| |||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtc 30866223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 31959213 - 31959139
Alignment:
Q  59 ccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||| | ||||||||||  |||||| |||||| ||||||||||| | ||| |||||||||||||| ||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtc 31959139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 7723250 - 7723323
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||| |||||||||||  || ||||||  |||||| ||||||||||| |||||||  ||||||||||||    
T  7723250 cgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgtc 7723323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 7801155 - 7801228
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    ||||||||||||| | ||||||| || ||||||| |||||| |||||||||||   |||||||||||| |||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 25038086 - 25038151
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||||||  ||||| ||||||||||||| |||||  ||||||||| || ||||||    
T  25038086 taattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcg 25038151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 28715364 - 28715303
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||| |||||||||||||||| | |||||||||| |||||||  ||||| |||||||||||    
T  28715364 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 1532290 - 1532207
Alignment:
Q  63 cacatataattacactaaattatgagattttatcaaattattaac--agtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    |||||||||||||||| |||||||  ||||||||||||||||| |   |||||| |||||||||||  |||||| ||| |||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgttcggtgt 1532207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 7027301 - 7027225
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgaga-ttttatcaaattattaacagtgtcggcgtgtcagtgtccg 129  Q
    ||||||||||||||||||||||||| ||||||| || |||| ||||||||| |   |||||||||| | ||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattatcaggggtgtcggcgtattagtgtccg 7027225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 7740710 - 7740650
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatt 104  Q
    ||||| |||||||||| |||||||||||||||||| |||| || ||||||  |||||||||    
T  7740710 gtgtcgtgtccgacactgacacatataattacactcaattttgtgattttcacaaattatt 7740650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 10339132 - 10339240
Alignment:
Q  61 gacacatataatta-cactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccg 159  Q
    |||||||||||||| |||| ||||||| |||||| |||||||| |  | |||||||||||||||||| | ||||| ||   ||||   ||| ||||||||    
T  10339132 gacacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatccg 10339231  T
Q  160 tgcttcata 168  Q
    |||||||||    
T  10339232 tgcttcata 10339240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 13360368 - 13360420
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaatta 102  Q
    |||| |||||||| ||||||||||||||| ||||||| |||||| ||||||||    
T  13360368 tgtctgacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 21068154 - 21068234
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||||||||||||  || |||||  || | ||| ||||||| |||||| |||||||| ||||| ||||||    
T  21068154 cgacaccgacacatataattacaccgaactatgattttatttcatattattagcagtgttggcgtgtcggtgtctgtgtcg 21068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 23771646 - 23771559
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||| |||||||||||||||  | |||||||||| || |||   ||||| | ||||||||||| ||||||||||||| |||||||||||    
T  23771646 tgtcgtgtccgacaccgacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgtccgtgtccgtgtc 23771559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 28862181 - 28862101
Alignment:
Q  54 cgacaccgacacatataattacactaaatt-atgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||||||| |||||||| |||| |||  ||||||||||||||||| |  |||||||||| | ||||| |||||    
T  28862181 cgacaccgacacatatgattacactgaattaatgtcattttatcaaattattatcgatgtcggcgtgccggtgtctgtgtc 28862101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 32298598 - 32298686
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||| |||| |||||| ||||||||||||||||||||||||| |||  | | ||||||||| | |||| ||| ||||||| ||| ||||    
T  32298598 tgtcatgtctgacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgttggcatgtcagtatccatgtc 32298686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 5626686 - 5626769
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| ||||||||||||||||||||| ||||||| || || | |||||| | |||  ||||   |||||||||||||||||||    
T  5626686 gtgtcgtgtccgacaccgacacatatatttacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtc 5626769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 6214619 - 6214540
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||||| |||||||||| ||||||| | |||| | |||||| || | || ||||||||| ||||| ||||||    
T  6214619 cgacaccgacacatctaattacacttaattatgtgtttttttaaaattactagcggtatcggcgtgttagtgttcgtgtc 6214540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 11784217 - 11784296
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||| ||||||||||||| | | ||| |||||| |||||||||||   |||| |||||||| ||||| ||||||    
T  11784217 gacaccgacatatataattacactgattcatgtgattttctcaaattattatatgtgtgggcgtgtcggtgtctgtgtcg 11784296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 12868709 - 12868748
Alignment:
Q  88 gattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  12868709 gattttttcaaattattaactgtgtcggcgtgtcagtgtc 12868748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 8931602 - 8931668
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgt 120  Q
    ||||| ||||||||||||||| ||| |||||||  ||||| ||||||| ||| | ||||||||||||    
T  8931602 cgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgt 8931668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 10760876 - 10760918
Alignment:
Q  89 attttatcaaattattaacagtgtcggcgtgtcagtgtccgtg 131  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||    
T  10760876 attttctcaaattattatcagtgtcgacgtgtcagtgtccgtg 10760918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 34172256 - 34172182
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagt 124  Q
    ||||||||||||||||||||||||  | | ||||||| |||||| ||||||| |||   |||||||| |||||||    
T  34172256 tgtccgacaccgacacatataattttaattaattatgtgattttctcaaattgttagaggtgtcggcatgtcagt 34172182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 1700415 - 1700362
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattat 103  Q
    |||||||||||||||| |||||||||||| || |||| |||||| | |||||||    
T  1700415 tgtccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 2153893 - 2153966
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||| |||||||||||||||||||   ||||| | ||||||||    ||||||||||||| |||||||||||    
T  2153893 cgacacctataattacactaaattatatcattttcttaaattattgttcgtgtcggcgtgtcggtgtccgtgtc 2153966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 4864126 - 4864073
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattat 103  Q
    ||||||||||| ||||||||||||| | |||||||||  ||||| |||||||||    
T  4864126 tgtccgacaccaacacatataattaaattaaattatgtcattttttcaaattat 4864073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 7625182 - 7625101
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||  | |||||||| ||||||||||   ||||| ||||||||||| | |||||| |||||| ||||| ||||||    
T  7625182 ccgacaccgattcctataattatactaaattatatcattttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtcg 7625101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaatt 101  Q
    ||||||||||||||||||| ||||||| |||||| |||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 17327655 - 17327700
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaa 99  Q
    |||||| |||||||||| ||||||||||||||| |||||| |||||    
T  17327655 cgacactgacacatatagttacactaaattatgtgattttctcaaa 17327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 24138483 - 24138426
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||||| |||||||| |||||| ||||||  |||||| ||||||||||| |||||||    
T  24138483 acaccgatacatataaatacacttaattatatgattttttcaaattattagcagtgtc 24138426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 25096477 - 25096404
Alignment:
Q  59 ccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||| || ||||||||||| |||||| |||||| |||||||||||   |||||| |||||| ||||| ||||    
T  25096477 ccgacatatgtaattacactagattatgtgattttctcaaattattagtggtgtcgtcgtgtcggtgtctgtgt 25096404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 32511664 - 32511717
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||| |||| |||||||||||| ||||||| |||||| | |||||||||    
T  32511664 tccgacaccaacacttataattacactgaattatgtgattttcttaaattatta 32511717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 33340392 - 33340457
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    ||||| |||||||||| |||| |||| |||||| | ||||||| ||| ||||||||||||| ||||    
T  33340392 gacacttataattacagtaaaatatgtgatttttttaaattatcaacggtgtcggcgtgtctgtgt 33340457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 35125706 - 35125641
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    ||||| |||||||||| |||| |||| |||||| | ||||||| ||| ||||||||||||| ||||    
T  35125706 gacacttataattacagtaaaatatgtgatttttttaaattatcaacggtgtcggcgtgtctgtgt 35125641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 16388174 - 16388248
Alignment:
Q  14 agacactcctcggattaggcgtgtaccggtgt---gtcttgtccgacaccgacacatataattacactaaattat 85  Q
    ||||| |||||||||||||||||| || ||||   | | |||||||||||||||| | |||||||||| ||||||    
T  16388174 agacagtcctcggattaggcgtgtcccagtgtcgtgccgtgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 17302399 - 17302355
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||| |||||||| |||||| | |||||||||    
T  17302399 gacacatataattacacaaaattatgtgattttcttaaattatta 17302355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 24831830 - 24831786
Alignment:
Q  90 ttttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| |||||||||||||| ||||||||||||| ||| |||||||    
T  24831830 ttttttcaaattattaacaatgtcggcgtgtcattgttcgtgtcg 24831786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 33818015 - 33817957
Alignment:
Q  50 tgtccgacaccgacac---atataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||   ||||||||||||| |||||||| ||||| || ||||||||    
T  33818015 tgtccgacaccgacacgatatataattacactgaattatgaaattttctccaattatta 33817957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 54 - 144
Target Start/End: Original strand, 11927086 - 11927176
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | ||  ||||||||| |||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggtgt 11927176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 54 - 144
Target Start/End: Complemental strand, 11944724 - 11944634
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||  ||||||||| |||||||||    
T  11944724 cgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgt 11944634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 926785 - 926902
Alignment:
Q  51 gtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgt 150  Q
    ||||||||||||||| |||||||||||| ||  |||||||||| |||||||||||  ||||| ||||||||||||||||||||| ||  |||||  ||||    
T  926785 gtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgt 926884  T
Q  151 ttgtatccgtgcttcata 168  Q
    | ||||||||||||||||    
T  926885 tcgtatccgtgcttcata 926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 13844592 - 13844669
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||||||||| |||||    
T  13844592 tgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 11803316 - 11803204
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgta 155  Q
    ||||| ||||||||||||||||| ||||||| |||||| | ||||||||||||||||| | || ||||||| ||||||| |||||||||| |||| ||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgtttggtgttcgtgtctgta 11803217  T
Q  156 tccgtgcttcata 168  Q
    | |||| ||||||    
T  11803216 ttcgtgtttcata 11803204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 20873132 - 20873048
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||| | |||||||||||||||||| |||||| ||||||||||| |  |||||||||||||||||||||||||    
T  20873132 tgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcg 20873048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 33405373 - 33405464
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||| | | | |||||||||||| |||||    
T  33405373 tgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattattaacagggccagtgtgtcagtgtccatgtcg 33405464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 15816129 - 15816205
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||||||||   ||||||||||||||||||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 4786336 - 4786411
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||  |||||||||||||||||||    
T  4786336 tccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 28384995 - 28385074
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||||||||||| |||||||||||||  ||| ||||||||| |||||||  |||||||||||||||||    
T  28384995 gacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcg 28385074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 36934721 - 36934615
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtg 161  Q
    ||||||||||||||| | ||||||| |||||| || |||||||| | |||||| ||||| ||||||||||||| ||||||||||||| |  |||||| ||    
T  36934721 acacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtttggtgtttgtatccgtatccatg 36934622  T
Q  162 cttcata 168  Q
    |||||||    
T  36934621 cttcata 36934615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 34897148 - 34897068
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||||| | |||||| |||||| ||||||||    
T  34897148 tgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 22652035 - 22651916
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| | |||||| | | ||||||| |||||| ||||||||||| | |||||||||||||||||||||||||| ||  |||||  ||||  |    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccg 22651936  T
Q  154 tatccgtgcttcatatcttt 173  Q
    ||||||| ||||||| ||||    
T  22651935 tatccgtacttcatagcttt 22651916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 31109514 - 31109597
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| |||||||||| ||| ||| |||| |  |||||| ||||||||||||| |||||||||||||||||||||||||    
T  31109514 tgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtc 31109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 31236573 - 31236644
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||| |||||||||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||    
T  31236573 tgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 36450698 - 36450833
Alignment:
Q  7 gaagcagagacactcctcggattaggcgtgtaccggtgt---------gtcttgtccgacaccgacacatataattacactaaattatgagattttatca 97  Q
    |||||| |||||||||||||||||||||||| | |||||         ||| ||||||||||| |||| | |||||||||| |||| || |||||| |||    
T  36450698 gaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttca 36450797  T
Q  98 aattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||   |||||||||||||||||||||||||    
T  36450798 aattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 39954282 - 39954352
Alignment:
Q  57 caccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||| | ||||||||||||| |||||    
T  39954282 caccgtcacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 27101584 - 27101500
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    |||||| |||||||||| ||||| ||||||| |||||||||||| |||||| ||||||||||| | |||||||||||||| |||||    
T  27101584 tgtgtcatgtccgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtcaatgtcc 27101500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 29510306 - 29510418
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgta 155  Q
    |||||||||| | |||||| ||| |||| || |||||| ||||||||||| | |||||||||||||||||||||||||| ||  |||||   |||  |||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagta 29510405  T
Q  156 tccgtgcttcata 168  Q
    |||||||||||||    
T  29510406 tccgtgcttcata 29510418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 44067569 - 44067461
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccg 159  Q
    |||||| ||||||||||||  ||||||  ||||| ||||||||||| | ||||||||||||||||||| |||| | || ||||||  |||| ||| ||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgtgtctgtgtccg 44067470  T
Q  160 tgcttcata 168  Q
    |||||||||    
T  44067469 tgcttcata 44067461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 4298887 - 4298966
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||| | |||||||| ||||||||| |||||| ||||||||||||| |||||||||||| ||| || ||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcg 4298966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 25172698 - 25172777
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| || | ||||| ||||||||    
T  25172698 cgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagtatccgtgtc 25172777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 27213601 - 27213526
Alignment:
Q  59 ccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||||| | ||||||| |||||| | ||||||||| ||||||||||||||| || |||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcg 27213526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 5813661 - 5813575
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    ||||| |||||||||||||||| | || |||||||||| |||| || ||| ||||||||||| | ||||||||||||| ||||||||    
T  5813661 gtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccgt 5813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 31557066 - 31556985
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtg 125  Q
    |||||| |||| |||||||| || | |||||||||| ||||||| |||||| ||||||||||||| |||||||||||||||||    
T  31557066 tgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 2572056 - 2572177
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| | |||||||||||||||||| |||||| |||||||||||   |||||| |||||| || ||||||||| ||   ||||  ||||  |    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccg 2572155  T
Q  154 tatccgtgcttcatatctttgt 175  Q
    ||||| ||||||||| ||||||    
T  2572156 tatccatgcttcatagctttgt 2572177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 8343082 - 8342980
Alignment:
Q  7 gaagcagagacactcctcggattaggcgtgtaccggtgtgt----cttgtccgacaccgacacatataattacactaaattatgagattttatcaaatta 102  Q
    |||||| |||||||| ||||||||||||||| |||||||      | ||| |||||||||||| | |||||||||||||||||| |||||| ||||||||    
T  8343082 gaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgtacgacaccgacacttgtaattacactaaattatgtgattttttcaaatta 8342983  T
Q  103 tta 105  Q
    |||    
T  8342982 tta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 16867205 - 16867320
Alignment:
Q  54 cgacaccgacacatataattacactaaattatg---agattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgt 150  Q
    |||||||||||| ||||||||||||||||||||     ||||| |||||||||||||  ||| || |||| ||| || |||||| ||| | |||||||||    
T  16867205 cgacaccgacacttataattacactaaattatgttattattttttcaaattattaacgttgttggtgtgttagtatcagtgtcgtgttagatgtttgtgt 16867304  T
Q  151 ttgtatccgtgcttca 166  Q
    | ||||||||||||||    
T  16867305 tcgtatccgtgcttca 16867320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 24362209 - 24362282
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||||| ||||||| |||| | ||||||||||| | ||||||||||||| ||||| ||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcg 24362282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 18170478 - 18170562
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||  | |||||||| | |||||||  ||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcg 18170562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 18634046 - 18634130
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||  | |||||||| | |||||||  ||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcg 18634130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 24669492 - 24669412
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | |||||||||| |||||||  ||||  ||||||||||||| ||||| ||||||||||||| ||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcg 24669412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 14731763 - 14731712
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 24413555 - 24413674
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaa-ttattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgt 148  Q
    |||||||||| ||||| ||||||||| || |||||||   |||| ||||| |||||||| ||||| |  ||||||||||||||||| || ||||||  ||    
T  24413555 tgtccgacactgacacttataattaccctgaattatgtatttttctcaaaattattaacggtgtcagtatgtcagtgtccgtgtcgtgtctggtgtccgt 24413654  T
Q  149 gtttgtatccgtgcttcata 168  Q
    ||  ||||||||||||||||    
T  24413655 gtccgtatccgtgcttcata 24413674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 24613583 - 24613509
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtg 125  Q
    |||||||||||||||| | |||||||||| ||||||| |||||| ||||||||||| | ||||||| |||||||||    
T  24613583 tgtccgacaccgacacttgtaattacacttaattatgtgatttt-tcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 37283769 - 37283924
Alignment:
Q  17 cactcctcggattaggcgtgtaccggt------gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagt 110  Q
    ||||||||||||||| ||||| |||||      ||||| ||||| |||||||||||||  |||||||| ||||||| |||||| ||| ||||||| | ||    
T  37283769 cactcctcggattagacgtgtcccggtagacacgtgtcgtgtcccacaccgacacata--attacactgaattatgtgattttctcagattattagcggt 37283866  T
Q  111 gtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
    | | || ||||||||||||||||  || ||||||   |||  ||||||||||||||||    
T  37283867 gcccgcatgtcagtgtccgtgtcatgtctggtgtccatgtacgtatccgtgcttcata 37283924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 12606823 - 12606889
Alignment:
Q  48 cttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcg 114  Q
    |||||| |||||||||||||||||||||| | ||||||  |||||| ||||||||||| ||||||||    
T  12606823 cttgtctgacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtcg 12606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 12936515 - 12936569
Alignment:
Q  78 taaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||    
T  12936515 taaattatgtgattttatcaaattattaacaatgtcgacgtgtcagtatccgtgt 12936569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 14134757 - 14134679
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| ||||||||||||| ||||||| |||||| |||||||||||  | ||||| |||||| ||||| |||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgtccgtgtcggtgtc 14134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 3025620 - 3025559
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||| |||||||||| ||||| |||||||||||| ||||||| |||||| |||||||||||    
T  3025620 gtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 22197743 - 22197856
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgt 154  Q
    ||||| ||||| | |||||||||||||||||| || ||| ||||||||||| | |||| ||||||| |||||| |||||| ||  |||||  |||| |      
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgtgtctag 22197842  T
Q  155 atccgtgcttcata 168  Q
    ||||||||||||||    
T  22197843 atccgtgcttcata 22197856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 25192350 - 25192423
Alignment:
Q  57 caccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    ||||||||| |||||||| ||| |||||||  | ||| ||||||||||| | ||||||||||||||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgt 25192423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 8343375 - 8343295
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||| | |||||||||||||||||| |||||| ||||||||||| |  |||||| ||||| ||||| ||||||    
T  8343375 cgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcg 8343295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 4948715 - 4948660
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||| | |||||||||| ||||||| |||||| |||||||||||    
T  4948715 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 13436964 - 13437043
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||| | | |||||  | ||||||| |||||| ||||||||||| | |||||||||||||||||||| ||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtc 13437043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 22596056 - 22595981
Alignment:
Q  51 gtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||||||| |||| | |||||||||| |||||||  ||||| | ||||||||| | ||||||||||||||||||    
T  22596056 gtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 31580124 - 31580187
Alignment:
Q  51 gtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcg 114  Q
    |||||||| |||||| |||||||||||| ||||||| |||||| | |||||||||||| |||||    
T  31580124 gtccgacatcgacacctataattacactcaattatgtgattttcttaaattattaacattgtcg 31580187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 34223002 - 34222955
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  34223002 accgacacatataattacacttaattatgtgattttattaaattatta 34222955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 24858032 - 24857954
Alignment:
Q  90 ttttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
    |||| ||||||||||||| |||||||||||||  ||||||||||| ||  |||||| ||||  |||||||| |||||||    
T  24858032 ttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgttcgtgtccgtatccgttcttcata 24857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 29776085 - 29776015
Alignment:
Q  64 acatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||| ||| ||||| | |||||| ||||||||||| |||||||| | ||||| |||||||||||    
T  29776085 acatataattatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcg 29776015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 4673440 - 4673505
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||| |||| |  |||||| ||||||||||| | ||||||||||||||||||| ||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcg 4673505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 29358035 - 29357962
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatc-aaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||||||||| |||| ||||||||| || ||| || |||||||||||||| ||| ||| ||||||||    
T  29358035 gacaccgacacatataaatacattaaattatgtgagtttttcaaaattattaacagtatcgacgtatcagtgtc 29357962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 3677849 - 3677765
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| ||||||| |||||||||||||   ||||||| |||||| | ||||||||||  ||||||  |||||||| |||||||||    
T  3677849 tgtccaacaccgatacatataattacatagaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcg 3677765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 13018338 - 13018262
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||||  ||||| |||||||||||||||| |||||| ||||||||||||| || | | ||||| |||||| ||||    
T  13018338 acaccgattcatatcattacactaaattatgtgattttgtcaaattattaacggtattgacgtgttagtgtctgtgt 13018262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 20679396 - 20679468
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||| |||||||||||| || |||| |||||| |||||||||||   |||||| | ||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtc 20679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 30271306 - 30271366
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccg 129  Q
    ||||||||||  |||||| |||||| |||||| |||| | |||||||||||||||||||||    
T  30271306 taattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 12570514 - 12570581
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||||||||||| ||||||| | |||| | ||||||||| |||||||  |||||| |||||    
T  12570514 cgacacatataattacacttaattatgtgtttttcttaaattattagcagtgtcaacgtgtcggtgtc 12570581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 12985455 - 12985400
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||| |||| |||||| | ||||||| |||||| |||||||||||    
T  12985455 tgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 25566900 - 25566849
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||| | |||||||||| ||||||| |||||| |||||||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 25566849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 26902175 - 26902214
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagatttt 93  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  26902175 cgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 4611590 - 4611532
Alignment:
Q  57 caccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    |||||| ||||||||||||||| |||||||  ||||| ||||||||||| | |||||||    
T  4611590 caccgagacatataattacactgaattatgttattttctcaaattattagcggtgtcgg 4611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 7658520 - 7658458
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgt 118  Q
    ||||||||| ||||||||||||| |||||||  ||||| |||||||||||   ||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcggcgt 7658458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 8847315 - 8847277
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattt 92  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 24447076 - 24447010
Alignment:
Q  66 atataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||||||| |||||||||| |||||| ||||||||| |||  | | ||||||||||| |||||||    
T  24447076 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtatccgtgt 24447010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 26529788 - 26529730
Alignment:
Q  66 atataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagt 124  Q
    |||||||||| |||||||||| |||||| ||||||||| |||| | | |||||||||||    
T  26529788 atataattaccctaaattatgtgattttctcaaattatcaacattattggcgtgtcagt 26529730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 41831958 - 41832012
Alignment:
Q  72 ttacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    ||||||| ||||||| |||||| ||||||||||||| |||||||| |||| ||||    
T  41831958 ttacactgaattatgtgattttttcaaattattaactgtgtcggcatgtctgtgt 41832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 43737802 - 43737835
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacact 78  Q
    |||| |||||||||||||||||||||||||||||    
T  43737802 tgtcgtgtccgacaccgacacatataattacact 43737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 20785472 - 20785516
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||| ||||||||| |||||  |||||||||||    
T  20785472 gacacatataattacattaaattatgtgatttcctcaaattatta 20785516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 28383830 - 28383882
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaa 106  Q
    |||||| ||||||| |||| ||| ||||||| | |||||||||||||||||||    
T  28383830 cgacactgacacatgtaataacaataaattacgtgattttatcaaattattaa 28383882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 30077385 - 30077461
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    |||||||| ||||| | |||||||||| ||||||| ||| || ||||||||||| | | || |||||||| ||||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtcc 30077461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 90)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 1433513 - 1433399
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||| |||||||||||||| ||||||||||| ||| |||||  |||   |    
T  1433513 cgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccg 1433414  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  1433413 tatccgtgcttcata 1433399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 18213029 - 18213148
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttat-caaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgt 148  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |  |||  ||||   |||||||||| ||||||||||||||| || ||||||| ||    
T  18213029 tgtccgacaccgacacatataattacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtctggtgttcgt 18213128  T
Q  149 gtttgtatccgtgcttcata 168  Q
    ||| ||||| ||||||||||    
T  18213129 gttcgtatctgtgcttcata 18213148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 15902879 - 15902801
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||||| |||||||||| ||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcg 15902801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 26733367 - 26733273
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    |||||||||||||||||| |||||| ||| ||||||| |||||| ||||||||||| | |||||| ||||||||||||||||||| || ||||||    
T  26733367 tgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgt 26733273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 22602710 - 22602824
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||| ||| || ||||||||||||||||| | |||||| ||| ||||   ||||  |    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgttaggtgcccgtgtccg 22602809  T
Q  154 tatccgtgcttcata 168  Q
    ||||||| |||||||    
T  22602810 tatccgtccttcata 22602824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 15680878 - 15680789
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| |||||||||||||||| |||||||||||||||||||| |||||| |  |||||||| |  ||||||||||||||||||| ||||    
T  15680878 gtgtcgtgtccgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtccatgtc 15680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 3721156 - 3721073
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||| || |||||   |||||||||||||||||    
T  3721156 tgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagca-tgtcgaaatgtcagtgtccgtgtcg 3721073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 11061072 - 11061156
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| ||||||||||| | |||||| ||||||||||| |||||| ||||||||||| | ||||||| ||||||||||||||||||    
T  11061072 tgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcg 11061156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 20549854 - 20549778
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    ||||||||||||||||||||||||||||| ||||| | |||||| ||||||||||| | ||||||| ||||||||||    
T  20549854 tgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 22484095 - 22484004
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| |||| |||||||||||||||||||| ||| |||||||  ||||| | ||||||||| | ||||||||||||||||||| ||||||    
T  22484095 tgtgtcatgtctgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 5409836 - 5409950
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| | ||||| |||| ||||||| |||||| ||||||||||| | || || |||||||||||||| |||||  |  ||||| ||||| ||    
T  5409836 cgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctg 5409935  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  5409936 tatccgtgcttcata 5409950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 144
Target Start/End: Original strand, 7328691 - 7328781
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||| ||| ||||| | |||| |||||| ||| |||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgt 7328781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 25481965 - 25481847
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    ||||||||||| |||| | |||||||||| ||||||| |||||| ||||||||||| | |||||||||||||| ||||| ||| | ||  | |||  |||    
T  25481965 tgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtg 25481866  T
Q  150 tttgtatccgtgcttcata 168  Q
    | |||||||||||||||||    
T  25481865 tctgtatccgtgcttcata 25481847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 26329382 - 26329496
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||| |||||||||||||||||||| |||| || | |||| |||||||||||||  |||||||||||||||||| |||||| ||   ||||  |||| ||    
T  26329382 cgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgtgtctg 26329481  T
Q  154 tatccgtgcttcata 168  Q
    ||| |||||||||||    
T  26329482 tattcgtgcttcata 26329496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 32308179 - 32308105
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    |||||| |||||||| ||||||||| ||||||| |||||| ||||||||||| | ||||||||||||||||||||    
T  32308179 cgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 9408334 - 9408407
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||||| | |||||||||||||||||| |||||| ||||||||||||  ||||||| |||||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 10042996 - 10042916
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||| ||||||||| |||||||||| || |||||||||||||||   |||||||||||| |||||||||||||    
T  10042996 cgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcg 10042916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 24339701 - 24339621
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | |||||||||| ||||||| |||||| ||||||||||| | |||||||||||||| ||||| |||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcg 24339621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 27945100 - 27945020
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | |||||||||| |||||||  ||||| |||||||||||   ||||||||||||||||||||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcg 27945020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 5233686 - 5233615
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| |||||||||||||||||| |||||| |||||| ||||||||||||| || |||| |||||||||||    
T  5233686 acaccaacacatataattacactagattatgtgattttctcaaattattaaccgtatcggtgtgtcagtgtc 5233615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 9482996 - 9482917
Alignment:
Q  51 gtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||||||||||||||||||||| |||| || |||||| ||||||||| | |  |||||| ||||||||||||||    
T  9482996 gtccgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgtccgt 9482917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 19206108 - 19206029
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||||||| | | ||||||| |||||| ||||||||||| | ||||||||||||  ||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcg 19206029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 2425736 - 2425813
Alignment:
Q  57 caccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||| || |||| ||||||| |||||| ||||||||||||| ||| |||||||||||| || ||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcg 2425813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 24105738 - 24105657
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| ||||||| | |||||||||| ||| |||  ||||| ||||||||||| | ||||||||||||||||||||||||||    
T  24105738 ccgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcg 24105657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 43250046 - 43249973
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||| ||||||||||||  ||||||  ||||| ||||||||||| | |||||||||||||||||||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtc 43249973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 21828407 - 21828483
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||| |||||||| ||||||| |  |||||| |||||| |||||||| |||| ||||||||||||||||||||||||    
T  21828407 acactgacacatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtgt 21828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 49107879 - 49107800
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||||||| ||||| ||||||| | |||| ||||||||||| | ||||||| ||||||| ||||||||||    
T  49107879 cgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcg 49107800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 2948739 - 2948672
Alignment:
Q  57 caccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagt 124  Q
    |||||||||||||||||||||||||||| | |||||| | ||||||| | | ||||||||||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtcagt 2948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 7438764 - 7438693
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    ||||||||||| | |||||||| | ||||||| |||||| ||||||||||||| |||||||| |||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 16341555 - 16341496
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    |||||||| |||||||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  16341555 cgacaccggcacatataattacacttaattatgtgattttctcaaattattatcagtgtc 16341496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 18013074 - 18013181
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||| |||||||||||||||||| |||||||  ||||| | |||||||||  |||||| |  |||||||||||||||||  | || || | |||||||    
T  18013074 cgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtcgtttctgatggtcgtgtttg 18013173  T
Q  154 tatccgtg 161  Q
    ||||||||    
T  18013174 tatccgtg 18013181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 22868094 - 22868023
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||||||||||||||| ||||||| |||||| ||| |||||||   ||||||||||||||||||| ||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgt 22868023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 5835315 - 5835233
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||| |||| |||||||||||||||||||||||| |||||||  ||||| ||||| |||||   |||||||||| ||||||||    
T  5835315 tgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtc 5835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 6630912 - 6630985
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| ||||||||||||||||||| ||||| | || ||| |||||||||||   |||||||||||||||||||    
T  6630912 cgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 21568620 - 21568689
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||||||||| ||||| |||||||| |||||||||||||| | ||||||||| | ||||| |||||||    
T  21568620 tccgacaccgactcatatgattacacttaattatgagattttcttaaattattagccgtgtcagcgtgtc 21568689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 42720886 - 42720963
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||| ||||| |||||||||||||||| | ||||||| |||||| ||||||||||| | |||||  ||||||||||||    
T  42720886 tgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtc 42720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 5236045 - 5235965
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||| | ||||||||||||||||||||   ||||| | ||||||||| | |||||| |||||||||||| ||||||    
T  5236045 cgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcg 5235965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 13770750 - 13770670
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| |||||| | |||||||||| |||||||  ||||| | ||||||||| | |||||||||| |||||||||||||||    
T  13770750 cgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcg 13770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 17851488 - 17851376
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgta 155  Q
    |||| |||||||||||||||||| ||||||| |||||| | ||||||||| | || |||  ||||| || ||| ||||| ||  |||||  |||| ||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgtgtctgta 17851389  T
Q  156 tccgtgcttcata 168  Q
    |||||||||||||    
T  17851388 tccgtgcttcata 17851376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 23191959 - 23191879
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||| ||||| || |||| |||||||||| || |||| |||||| ||||||||||| | |||||||||| |||||||||||    
T  23191959 tgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 29787383 - 29787447
Alignment:
Q  68 ataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    ||||||||||| ||||||| |||||| ||||||||||| | |||||||||||| | |||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgt 29787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 33384584 - 33384648
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgt 120  Q
    ||||| ||||||||||||||||||||||||  |||||| ||| ||||||||| ||||||| ||||    
T  33384584 acaccaacacatataattacactaaattataggattttctcagattattaacggtgtcggtgtgt 33384648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 38143286 - 38143230
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaa 106  Q
    |||| |||||| ||||||||||||||| ||||||||| |||||| ||||||||||||    
T  38143286 tgtctgacaccaacacatataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 43027469 - 43027549
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | || |||||||  |||||| |||||| ||||||||||| | | |||| |||||||||||||||||||    
T  43027469 cgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcg 43027549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 18215186 - 18215265
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||| | ||| ||||||  |||||| |||||| ||||||||||| | | |||||||||| ||||||||||||    
T  18215186 cgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 27093415 - 27093474
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    |||||||| |||||||||||||||||||||| |||||| | ||||||||| | |||||||    
T  27093415 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcgg 27093474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 27184886 - 27184827
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    |||||||| |||||||||||||||||||||| |||||| | ||||||||| | |||||||    
T  27184886 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcgg 27184827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 41020566 - 41020483
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||| ||| | |||||||| |||||||||||||||||||||| ||||||   |||||||||   |||||| |||||||||||    
T  41020566 tgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagtgt 41020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 1401093 - 1401007
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtg 131  Q
    |||| |||| |||||||| || |||||||||||| ||||||| || ||| ||||||||||| |  | || |||||||||||||||||    
T  1401093 tgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtccgtg 1401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 4017800 - 4017874
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||| |||||||||||||||    |||| ||||||||||| | ||||||||||||| ||||||||||||    
T  4017800 cgacacttatgattacactaaattatatcgttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcg 4017874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 5956324 - 5956218
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtg 161  Q
    ||||||||||||||| ||||||||  |||||| | |||||||||  ||| ||||||||||||| ||| ||||| || || | | | ||| ||||||| ||    
T  5956324 acacatataattacattaaattatttgatttttttaaattattaggagtatcggcgtgtcagtatccatgtcgtgtctgttatctatgtctgtatccatg 5956225  T
Q  162 cttcata 168  Q
    |||||||    
T  5956224 cttcata 5956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 11722124 - 11722178
Alignment:
Q  80 aattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||| |||||| ||||||| ||| | ||||||||||||||||||||||||||    
T  11722124 aattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcg 11722178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 21826336 - 21826242
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    |||||||||||||||||||| |||| ||| | ||||| |||||| | |||||||||   |||||||||||| ||||||  ||||| || ||||||    
T  21826336 tgtccgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtctatgtcgtgtctggtgt 21826242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 21880222 - 21880160
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||| |||||||||||||||| | |||||||||| |||||||  ||||| |||||||||||    
T  21880222 tgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 28155633 - 28155563
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgt 120  Q
    |||||||||||||||| | |||||||||  |||||||  ||||| ||||||||||| | ||||||||||||    
T  28155633 tgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 37742581 - 37742503
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||||||| |||||| | ||| |||| ||||| | |||||||||   ||||||||||| |||||||||||||    
T  37742581 gacaccgacacatattattacattgaatcatgaaattttgttaaattattagtggtgtcggcgtggcagtgtccgtgtc 37742503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 598277 - 598188
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| |||| ||||||||||| || ||||||| | ||||| | |||||| | ||||||||| | ||||||  |||||||||||||||||    
T  598277 gtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtc 598188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 10377555 - 10377486
Alignment:
Q  65 catataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||| ||||||  |||||| | | |||||||||||||||||| || |||| |||||||||    
T  10377555 catataattacactgaattatatgattttcttatattattaacagtgtcggcctgccagtatccgtgtcg 10377486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 21864877 - 21864785
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaat--tatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| ||||||||| |||||| | ||||||||||||||  |||||  |||| ||||||||||| | ||||| | ||||| ||||||||||||    
T  21864877 gtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcg 21864785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 32287454 - 32287523
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcg 114  Q
    |||| ||||||||||||||||||||| || |||| ||||||| |||||| ||| ||||||| | ||||||    
T  32287454 tgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtcg 32287523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 2334309 - 2334238
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgaga--ttttatcaaattattaacagtgtcggcgtgtcag 123  Q
    |||||||||||| | |||||||||||||||||| ||  |||| |||||||||||||  ||||| ||||||||    
T  2334309 cgacaccgacacttgtaattacactaaattatgtgattttttttcaaattattaactttgtcgccgtgtcag 2334238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 3520345 - 3520421
Alignment:
Q  57 caccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||||||||||| | ||||||  |||||| |||||| |||| | ||||| |||||||| |||| |||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtcaatgtctgtgtc 3520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 3554495 - 3554579
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| |||||||||||||||  |||||||||| |||||||||  ||||| | ||||||| |   ||||||||||||| |||||    
T  3554495 tgtgtcgtgtccgacaccgacatctataattacattaaattatgtaattttcttaaattatcattggtgtcggcgtgtctgtgtc 3554579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 21138996 - 21139072
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||||||||||||||| | ||||||  |||||| ||||||||||||| |||| | | |||||||||| |||||    
T  21138996 cgacaccgacacatataattacagt-aattat--gattttctcaaattattaacggtgttgacatgtcagtgtctgtgtc 21139072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 37870956 - 37870880
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    ||||||||||||||||| |||||||||| |||| ||| |||||| |||||| ||||  ||||| || ||||| ||||    
T  37870956 tgtccgacaccgacacacataattacacgaaatcatgtgattttctcaaatgattagtagtgttggggtgtcggtgt 37870880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 4008568 - 4008643
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||| ||||||| | ||| |||  ||||||||||||||||||  ||||| |||||||||| || |||||    
T  4008568 accgacacatacaattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtcagtttctgtgtc 4008643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 4013960 - 4014035
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||| ||||||| | ||| |||  ||||||||||||||||||  ||||| |||||||||| || |||||    
T  4013960 accgacacatacaattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtcagtttctgtgtc 4014035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 19992060 - 19992009
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||| |||||||||||| || |||| |||||| |||||||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattatta 19992009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 25791711 - 25791633
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||||||||| |||| | | ||||| || ||| |||||| |||| | ||||||||||||||||||| |||||    
T  25791711 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattagcggtgtcggcgtgtcagtgtctgtgtc 25791633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 29763193 - 29763288
Alignment:
Q  73 tacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
    |||||| ||||||| |||||| ||||||||| |   |||| || |||||||||||  ||||| ||| ||||| |||||| |||||||| |||||||    
T  29763193 tacacttaattatgtgattttttcaaattataagttgtgttggtgtgtcagtgtctatgtcgtgttcggtgtctgtgttcgtatccgtacttcata 29763288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 30731094 - 30730982
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    ||||||||||||| |  |||||||| ||||||| |||||| ||||||||||  | ||||||||||| || |||  |||||| || ||||||  ||||  |    
T  30731094 cgacaccgacacaca--attacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccg 30730997  T
Q  154 tatccgtgcttcata 168  Q
    |||| ||||||||||    
T  30730996 tatctgtgcttcata 30730982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 39138507 - 39138464
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagatttt 93  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||||    
T  39138507 tgtccgacaccgacatatataattacactgaattatgtgatttt 39138464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 5548735 - 5548673
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggc 116  Q
    |||||| |||||||||||||||||| ||||||  |||||| ||||||||| | | ||||||||    
T  5548735 cgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggc 5548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 7197293 - 7197375
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||||||||||||| | |||||||| | |||||   |||||| | ||||||||| | |||||||||||||| |||| ||||    
T  7197293 tgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtctgtgt 7197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 8239056 - 8239102
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaa 106  Q
    ||||||||||||||||||| |||||| ||||||| | ||||||||||    
T  8239056 cgacacatataattacactgaattataagattttcttaaattattaa 8239102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 12278897 - 12278836
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgt 112  Q
    |||||||||| |||||||||||||||||| |||||||  ||||| | ||||||||| ||||||    
T  12278897 tgtccgacac-gacacatataattacactgaattatgtcattttcttaaattattatcagtgt 12278836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 24146880 - 24146814
Alignment:
Q  49 ttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    ||||| |||||||||||||||||||| | | ||||||| |||||| | ||||||||| || ||||||    
T  24146880 ttgtcagacaccgacacatataattatattgaattatgtgattttctaaaattattagcattgtcgg 24146814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 27229311 - 27229360
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatt 104  Q
    ||||||||| || |||||||||||||||||||| ||||||| |||||||||    
T  27229311 cgacaccgatacttataattacactaaattatgtgatttta-caaattatt 27229360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 640171 - 640134
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattt 92  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  640171 gacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 12289159 - 12289094
Alignment:
Q  68 ataattacactaaattatgagattttatcaaattattaacagt-gtcggcgtgtcagtgtccgtgt 132  Q
    |||||| |||| ||||||| |||||| ||||||||||| |||| | ||||||||| ||||||||||    
T  12289159 ataattccactgaattatgtgattttctcaaattattagcagtggccggcgtgtcggtgtccgtgt 12289094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 21140982 - 21141095
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||| ||||||| |||||| ||||| ||||||  |||||| | |||||||||   |||||| |||||| | |||||||||| ||  |||||  ||||  |    
T  21140982 cgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccg 21141081  T
Q  154 tatccgtgcttcat 167  Q
    ||||||||||||||    
T  21141082 tatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 27732243 - 27732292
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaattattaac 107  Q
    ||||||||||||||||||||| |||||||  ||||| | |||||||||||    
T  27732243 accgacacatataattacactgaattatgtaattttcttaaattattaac 27732292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 2034500 - 2034420
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||||||||  |||||||||||||  ||| || |||||||||||   |||||| ||||| ||| |||||||||    
T  2034500 cgacactgacacatatatatacactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcg 2034420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 8234216 - 8234132
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| |||||||||||| ||| | ||| |||||| |||||||  ||||| |||||||||||   ||||||| ||||| |||||    
T  8234216 tgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcggtgtgtctgtgtc 8234132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 17307952 - 17307904
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaatta 102  Q
    ||||||| ||||||||||||||||| |||||||  ||||| ||||||||    
T  17307952 cgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 19930947 - 19930991
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattatt 104  Q
    ||||||||||||||||| | |||||||  ||||||||||||||||    
T  19930947 cgacacatataattacattgaattatgtcattttatcaaattatt 19930991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 23751962 - 23751899
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcg 114  Q
    |||||||||| ||||| ||| |||||||||||||||   ||||||||||||||||| | ||||||    
T  23751962 tgtccgacac-gacacctatgattacactaaattatatcattttatcaaattattatccgtgtcg 23751899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 35297672 - 35297724
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaa 106  Q
    ||||||| ||||||||||||| | | ||||||| |||||| ||||||||||||    
T  35297672 cgacaccaacacatataattataatgaattatgtgattttctcaaattattaa 35297724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 35862023 - 35861951
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||| ||||| || ||||||| | ||||||| |||||| |||||||||||   |||||||||||| |||||    
T  35862023 cgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 48246825 - 48246893
Alignment:
Q  66 atataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||| | | || || |||||| |||||||| ||||||||||| ||||||| |||| ||||||    
T  48246825 atataattacattgagttgtgtgattttctcaaattaataacagtgtcgacgtgtcattgtctgtgtcg 48246893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 101)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 22881579 - 22881689
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcg 114  Q
    ||||||||||||||||| ||||| |||||||  | |||||||||||||||| | |||||||||||||||||| |||||| |||||||||||   ||||||    
T  22881579 gacactcctcggattagacgtgtcccggtgt--cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcg 22881676  T
Q  115 gcgtgtcagtgtc 127  Q
    |||||||||||||    
T  22881677 gcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 42359401 - 42359563
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgt---------gtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||| |||||||         |||||||||||||||||||| | |||||||||| |||| || |||||| |||||||||||    
T  42359401 gacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattatta 42359500  T
Q  106 acagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
       ||||| |||||||||||||||||| | ||  |||||| ||||  ||||||||||||||||    
T  42359501 gatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccgtatccgtgcttcata 42359563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 46348373 - 46348462
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| |||||||||||||||| | |||||||||||||||||  |||||| ||||||||||| | |||||||||||||||||||||||||    
T  46348373 gtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 52903312 - 52903229
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||| ||||||||||| || ||||||||| ||||||||||||    
T  52903312 tgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtc 52903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 19562622 - 19562699
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||| ||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtgt 19562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 9709883 - 9709767
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||||||||||||||||||||||||||   ||||||| |||||| ||||||||||| | |||| ||| ||||||||||||||||| || || |||   ||    
T  9709883 tgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtccatg 9709784  T
Q  150 tttgtatccgtgcttca 166  Q
    | |||||||||||||||    
T  9709783 tctgtatccgtgcttca 9709767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 22515876 - 22515964
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtg 131  Q
    |||||| |||||||||||||||| | |||||||||||||||||| |||||| ||||||||||| | ||||| ||||||| |||||||||    
T  22515876 tgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 398772 - 398879
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgt 160  Q
    ||||| |||||||||||| ||||||| |||||| ||||||||||| | |||||||||||||||||||||||||| ||  |||||  | ||  ||||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgt 398871  T
Q  161 gcttcata 168  Q
    ||||||||    
T  398872 gcttcata 398879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 9103702 - 9103584
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||||||||||||||| | || ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||  ||  |||||| |||    
T  9103702 tgtccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtcaggtgttcgtg 9103604  T
Q  150 tttgtatccgtgcttcatat 169  Q
    |   ||||||||||||||||    
T  9103603 tccatatccgtgcttcatat 9103584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 6612171 - 6612285
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| | |||||||||| |||||||  ||||| ||||||||||||| || ||||||||||| ||||||||||| ||  |||||| ||||  |    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccg 6612270  T
Q  154 tatccgtgcttcata 168  Q
    |||| ||||||||||    
T  6612271 tatctgtgcttcata 6612285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 36878524 - 36878447
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||| ||||||||||| |||||||||||| ||||||| |||||| ||||||||||| | |||||||||||||||||||    
T  36878524 tgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 1486709 - 1486789
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| |||||||||||| ||||||| |||||| ||||||||||| | ||||| |||||||||| |||||||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcg 1486789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 13997953 - 13997869
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| | ||| ||||||||||||||||||||||| ||||||| |||||| | |||| |||||| |||||||||||||||||||    
T  13997953 tgtgtcgtctccaacaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 21530759 - 21530675
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| |||||||||||||||| |||||||| || |||||||  |||||| ||||||||||||| ||||||||||||| |||||    
T  21530759 tgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtctgtgtc 21530675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 2896112 - 2896199
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||| |||| |||||||||| |||||  |||||| ||||||| |||||| ||||||||||| | ||||||||||||||||||||||||    
T  2896112 tgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgt 2896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 25272541 - 25272427
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||||| ||||| |||||   ||||| ||||  |||||| || || ||| | ||||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtcaaagtgtctgtgtttgtgtcgtgtctgatgtatatgtttg 25272442  T
Q  154 tatccgtgcttcata 168  Q
    ||||| |||||||||    
T  25272441 tatccatgcttcata 25272427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 38078650 - 38078740
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||| |||||||||||||||| | |||||||| | ||||||| |||||| ||||||||||| | |||||| ||||||||||| ||||||    
T  38078650 tgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtc 38078740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 39953142 - 39953220
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||| | |||||||||| || ||||||    
T  39953142 tgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgtttccgtgtcc 39953220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 41877466 - 41877584
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||||||||||||||| | ||||||||||||||||||  ||||| ||||||||||| | ||||||||||  ||||||| |||||| || |||| |   ||    
T  41877466 tgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatccatg 41877565  T
Q  150 tttgtatccgtgcttcata 168  Q
    |  ||||||||||||||||    
T  41877566 tccgtatccgtgcttcata 41877584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 1864876 - 1864941
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||||||    
T  1864876 tgtccaacaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcgg 1864941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 5898256 - 5898345
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| |||| ||||||||| |||||||||||||| ||||||| |||||| ||| ||||||| | |||||||||| |||||||| |||||    
T  5898256 gtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtc 5898345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 5927331 - 5927420
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| |||||||||| ||||| | |||||||| ||||||||  |||||| ||||||||||| ||||||  ||||||||||||||||||||    
T  5927331 tgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcg 5927420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 6427409 - 6427332
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtg 131  Q
    ||||||| ||||||||||||||| | ||||||| |||||| ||||||||||| | |||| ||||||||||||||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtg 6427332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 37598900 - 37598816
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccg 129  Q
    ||||| |||||||||||||||| |||||||||||| |||| || |||||| |||||||||||   |||||||||||||||||||||    
T  37598900 gtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 122
Target Start/End: Original strand, 34257914 - 34257978
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtca 122  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||| |||||||    
T  34257914 accgacatatataattacactaaattatgtgattttattaaattattaacggtgtcgacgtgtca 34257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 39130763 - 39130835
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtca 122  Q
    ||||||||||||||||||||||||||||||||||||   ||||| | |||||||||| |||||| ||||||||    
T  39130763 tgtccgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtca 39130835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 9828103 - 9828036
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||||||   |||||||||||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 14332638 - 14332693
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  14332638 tgtccgacaccgagacatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 34712383 - 34712462
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||| ||||||||||||||||||||||||||  ||||| ||||||||||| ||||| ||| |||| | ||||||||||    
T  34712383 cgacactgacacatataattacactaaattatgttattttctcaaattattagcagtgacggtgtgttaatgtccgtgtc 34712462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 40181934 - 40181871
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  40181934 tgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 48450592 - 48450667
Alignment:
Q  59 ccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||| | ||||||||||||||||||  ||||| ||||||||||| | |||| |||||||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcg 48450667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 13436521 - 13436451
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgt 120  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||  | ||||||||| ||||||||||||||    
T  13436521 tgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcggcgtgt 13436451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 16927186 - 16927297
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgt 154  Q
    |||||| ||| ||||||||||||| ||||||  |||||| ||||||||||| |  || || |||||||||||| |||||| ||||| ||| ||||  |||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgtttgatgtctgtg--tgt 16927283  T
Q  155 atccgtgcttcata 168  Q
    ||||||||||||||    
T  16927284 atccgtgcttcata 16927297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 38503378 - 38503300
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||||||||||||||| || |||  |||||| ||||||||||| | ||||||| |||| ||||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtc 38503300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 47989556 - 47989443
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| | |||||||||| ||||||| |||||| | |||||||||   ||||||||||||||||||| |||||| || |||| |  |||| ||    
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattattatt-gtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgtctg 47989458  T
Q  154 tatccgtgcttcata 168  Q
    ||||| |||||||||    
T  47989457 tatccatgcttcata 47989443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 34298482 - 34298381
Alignment:
Q  67 tataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttca 166  Q
    |||||||||||| ||||||| |||||| |||||||||||   ||||||| |||||||| ||||||||| || ||||||  |||| |||||| ||| ||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgtacgtgtctgtatcggtgtttca 34298383  T
Q  167 ta 168  Q
    ||    
T  34298382 ta 34298381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 38075966 - 38076043
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||||||||||||| |||||||| | ||||| |||||  ||||||||||| |||||||| |||||| |||||    
T  38075966 tgtccgacaccgacacatatgattacactgacttatgtgatttactcaaattattagcagtgtcgtcgtgtccgtgtc 38076043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 5376500 - 5376580
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | |||||||||| |||||||  ||||| | ||||||||| | |||||||||||| |||||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcg 5376580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 18556471 - 18556535
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||| ||||||||| ||| || ||||||||||| | |||||||||||||||||||||||||    
T  18556471 taattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 20157350 - 20157430
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||| |||||||| ||||||| |||||| ||| ||||||| | ||||||  ||||||||| ||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcg 20157430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 1815327 - 1815240
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||| |||| ||||||||||| | |||||||||| ||||||| |||||| | |||| ||||   ||||||||||||||||||||||    
T  1815327 tgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 5944342 - 5944260
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgaga--ttttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| |||||||||||| ||||||| ||  |||| ||||||||||| | ||| ||||||||||||||| ||||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcg 5944260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 13011178 - 13011330
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttat-caaattattaacagtgtc 113  Q
    |||||||||||||||||| |||| | |||||    ||||| | ||| |||| | |||||||||| ||||||| |||||| | |||||||||| | |||||    
T  13011178 gacactcctcggattaggtgtgttctggtgttg--tgtccaaaaccaacacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtc 13011275  T
Q  114 ggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
    ||| ||||||||| ||||||| ||| |||||  |||| |||||| || |||||||    
T  13011276 ggcatgtcagtgttcgtgtcgtgttcggtgtccgtgtctgtatctgttcttcata 13011330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 17831537 - 17831604
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||| |||||||| ||| ||| |||||| ||||||||||| | |||||||||||||||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 113398 - 113289
Alignment:
Q  17 cactcctcggattaggcgtgtaccggtgt--gtcttgtc-cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||||||||||||||||||| |||||||  | |  | | ||||||| |||| | |||||||||| ||||||| |||||| ||||||||||| | |||||    
T  113398 cactcctcggattaggcgtgtcccggtgttggacacgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 113299  T
Q  114 ggcgtgtcag 123  Q
    ||||||||||    
T  113298 ggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 6415002 - 6415080
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||||| |||||| |||  |||||| |||||| |||||| |||| |  ||||||||||||||||||||||||    
T  6415002 gacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtc 6415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 7918211 - 7918325
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||| |||||||||||||||||| ||||||| |||||| |||||||||||    |||| |||||||| |||| |||||| ||  |||||   ||| ||    
T  7918211 cgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtccatgtctg 7918310  T
Q  154 tatccgtgcttcata 168  Q
    || ||||||||||||    
T  7918311 taaccgtgcttcata 7918325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 10572591 - 10572661
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||||||||| |||||||||  ||||||| |||||| |||||||||||   ||||||||||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 10577731 - 10577849
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||||| | ||||||||||||||||||||  ||| || |||||| | |||  |||| | ||||||||||||| |||||||||||| ||  |||||  |||    
T  10577731 tgtccgcccccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtg 10577830  T
Q  150 tttgtatccgtgcttcata 168  Q
    |  ||||||||||||||||    
T  10577831 tccgtatccgtgcttcata 10577849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 25452146 - 25452221
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||| ||||||||||||||  |||||||| |||||||||||||| ||||||||||| |||||| ||| |||| |||||    
T  25452146 tgtctgacaccgacacata--attacactgaattatgagattttctcaaattattagcagtgttggcatgtcggtgtc 25452221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 31672891 - 31672969
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    ||||||||||||| || | |||||||||| ||||| | |||||| ||||||||||| | ||||||| ||||||||||||    
T  31672891 tgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 12443457 - 12443537
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtg 131  Q
    |||||||||| | |||||| ||||||||| ||||||| |||||| ||||||||||| | ||||||||||||| || ||||||    
T  12443457 tgtccgacac-gtcacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgtg 12443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 14359537 - 14359601
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||||| |||||| ||||||||||| | ||||||||||||| ||||| ||||||    
T  14359537 taattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcg 14359601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 15323215 - 15323142
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| || ||||||||||||||||| |||||| ||||||||||||| || ||| | ||||||||||| |||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcg 15323142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 29229522 - 29229461
Alignment:
Q  53 ccgacaccgacacatataattac-actaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||||||||||||||||||||| ||||||| ||| |||||| ||||||||||| |||||||    
T  29229522 ccgacaccgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgtc 29229461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 44482289 - 44482240
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattat 103  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 9629900 - 9629980
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| |||||| ||||| ||||||  |||||||||||||||||| | ||||||  ||||| |||||| |||||    
T  9629900 cgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtccatgtcg 9629980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 23636045 - 23636129
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| |||||||||||||| ||||||||| |||||||  ||||| ||||||| ||  | || ||||||||||| |||||||||||    
T  23636045 tgtctgacaccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcg 23636129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 32724105 - 32724177
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||||||| |||||||||  | ||| |||||||||||||  ||||||||| ||||||| ||||||    
T  32724105 gacacatataattacattaaattatgtaaatttctcaaattattaacgatgtcggcgtatcagtgttcgtgtc 32724177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 7353483 - 7353570
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtg 131  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||  ||||| || ||||| || ||| ||||| ||||| |||| ||||    
T  7353483 gtgtcatgttcgacaccgacatatataattacactaaattatgtaattttttcgaattaatagcagcgtcggtgtgtcggtgtacgtg 7353570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 15641042 - 15641109
Alignment:
Q  66 atataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| ||||||| ||| ||| |||||| | ||||||||| |||||||||| ||||||||||||||||    
T  15641042 atatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtc 15641109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 30749903 - 30749860
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagatttt 93  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||    
T  30749903 tgtccgacaccgacacatataattacactgaattatgtgatttt 30749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 30771354 - 30771311
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagatttt 93  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||    
T  30771354 tgtccgacaccgacacatataattacactgaattatgtgatttt 30771311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 31015097 - 31015022
Alignment:
Q  59 ccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||| | |||||||||| ||||||| |||||| ||||||||||| | |||| |||| ||||||| ||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcg 31015022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 40258923 - 40258994
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    ||||| |||| ||||||||||| | |||||||||| ||||||| |||||| ||||||||||||  |||||||    
T  40258923 gtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 17754368 - 17754290
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| |||||||||| ||||||| |||||||  ||||| ||||||||||| | ||||||| ||||||| ||| ||||||    
T  17754368 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcg 17754290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 18337392 - 18337338
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatt 104  Q
    |||||||||||||||| | |||||||||| ||||||| |||||| ||||||||||    
T  18337392 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 19324612 - 19324550
Alignment:
Q  63 cacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtg 125  Q
    |||||||||||||||| ||||||| |||||| ||||||||| | |||||||| ||| ||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattatcagcagtgtcgacgtatcagtg 19324550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 29163371 - 29163453
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    ||||| ||||||||||||||||||||||||| | | ||||||| ||||||   ||||| ||| | ||||||||||||| ||||    
T  29163371 gtgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtctgtgt 29163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 40285654 - 40285728
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    ||||| |||||||||| | |||||| ||||||| |||||| ||||||||||| | |||| || ||||||||||||    
T  40285654 cgacatcgacacatatgactacactgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgtcc 40285728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 2784619 - 2784554
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    |||| |||||||||||||||||||| ||| ||||||| |||||| | ||||| ||||| |||||||    
T  2784619 tgtctgacaccgacacatataattatactcaattatgtgattttcttaaatttttaacggtgtcgg 2784554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 8842704 - 8842793
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| ||||||||||| | ||||||||||||| ||||||||  | |||| |||||||| ||   ||| ||||||||||||||| |||||    
T  8842704 gtgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaattactagtggtgccggcgtgtcagtgtctgtgtc 8842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 24577186 - 24577259
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||||| | |||||||||| ||||||| |||||| |||||||||||   ||||| ||||||| |||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 25361945 - 25361896
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattat 103  Q
    |||||| |||||||||||||||||| ||||||| |||||| |||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 40917808 - 40917730
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||| || | |||||||||| |||| |||  |||| ||||||||||| | |||||||||||||||| |||||||||    
T  40917808 cgacaccgagacttgtaattacacttaattgtga--ttttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcg 40917730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 48040465 - 48040542
Alignment:
Q  58 accgacacatataattacactaaattatgagat-tttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||| | || |||||||||| |||| ||  ||| ||||||||||| | ||||||||||||||||||||||||||    
T  48040465 accgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtgtcagtgtccgtgtcg 48040542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 1704992 - 1705068
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||||| | ||||||| || ||||||| |||||| |||||||||||   ||||||| ||||| ||||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgt 1705068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 16164322 - 16164366
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||    
T  16164322 gacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 19058852 - 19058924
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtca 122  Q
    |||||||||||||||| | |||||||||| |||||||  || || | ||||||||| | ||||||||||||||    
T  19058852 tgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtca 19058924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 34371772 - 34371728
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaa 98  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 35702554 - 35702661
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcg 114  Q
    ||||||||||||||||||||||| ||      || |||||||||| ||||| | |||||||||| ||||||  ||  || ||||||||||| | ||||||    
T  35702554 gacactcctcggattaggcgtgtccca-----tcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcg 35702648  T
Q  115 gcgtgtcagtgtc 127  Q
    || ||||||||||    
T  35702649 gcatgtcagtgtc 35702661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 3490396 - 3490463
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| | |||||||||| ||| |||   |||| ||||||||||| |||||||||||||||||||||    
T  3490396 cgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgtc 3490463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 17425101 - 17425144
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||    
T  17425101 acacatataattacattgaattatgtgattttatcaaattatta 17425144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 25098563 - 25098622
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    ||||||||||||||||| ||||||| |||||| ||||||||| | | |||||||| ||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtc 25098622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 27471567 - 27471638
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||| |||||| |||||||||| ||||||| | |||| ||||||||||| | || |||| ||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgt 27471638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 37055871 - 37055969
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
    ||||||||||||||||||  ||||| ||||||||||| |||| |||  || |||||||| |||||  ||  | |||| ||| ||||||||||||||||||    
T  37055871 taattacactaaattatgtaattttctcaaattattagcagtatcgatgtatcagtgtctgtgtcatgtccgatgttcgtg-ttgtatccgtgcttcata 37055969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 1262917 - 1262863
Alignment:
Q  80 aattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||| |||||| ||||||||||| | ||||||||||||| |||| |||||||    
T  1262917 aattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcg 1262863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 1486648 - 1486686
Alignment:
Q  7 gaagcagagacactcctcggattaggcgtgtaccggtgt 45  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  1486648 gaagcacagacactcctcggattaggcgtgtcccggtgt 1486686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 16812581 - 16812523
Alignment:
Q  75 cactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||| ||||||| |||||| |||||||||||   ||||||| |||||||||||||||||    
T  16812581 cactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtc 16812523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 21378635 - 21378557
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||| | |||||||||| |||||||  ||||| |||| |||||| | ||||||| |||||  |||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcg 21378557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 23804480 - 23804434
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaac 107  Q
    |||||||||||||||| ||||||||   |||||||||||||||||||    
T  23804480 gacacatataattacattaaattatataattttatcaaattattaac 23804434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 30847722 - 30847800
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| ||||||||| |||||| | |||||||  ||||| ||||||||||| ||||||| || |||| ||| ||||||||    
T  30847722 acactgacacatatgattacattgaattatgtcattttttcaaattattagcagtgtcagcatgtcggtgcccgtgtcg 30847800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 36906048 - 36905982
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    |||||||||||||| || ||||||| |||||| ||| ||||||| | |||| || ||||||||||||    
T  36906048 acacatataattactctgaattatgtgattttctcagattattagcggtgttggtgtgtcagtgtcc 36905982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 51410094 - 51410032
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgaga-ttttatcaaattatta 105  Q
    ||||| |||||||||||||||| | |||||||||| ||||||| || |||| |||||||||||    
T  51410094 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 51410032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 10233310 - 10233261
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||| |||||||||||||||||| ||||||| |||||| |||| ||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 12713337 - 12713378
Alignment:
Q  64 acatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||| |||||| | |||||||||    
T  12713337 acatataattacactaaattatgtgattttcttaaattatta 12713378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 12717428 - 12717469
Alignment:
Q  64 acatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||| |||||| | |||||||||    
T  12717428 acatataattacactaaattatgtgattttcttaaattatta 12717469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 22907335 - 22907412
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| |||||||||| |||||||| || |||||||   ||||| ||||||||||||| | |||| |||||| |||||    
T  22907335 tgtcccacaccgacacttataattataccaaattatataattttctcaaattattaacggcgtcgacgtgtctgtgtc 22907412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 28674869 - 28674792
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    ||||| |||| |||||| ||| ||||||||| ||| |||||||  ||||| ||||||||||||| ||||  |||||||    
T  28674869 gtgtcgtgtctgacaccaacatatataattatactgaattatgtaattttctcaaattattaacggtgttagcgtgtc 28674792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 44296495 - 44296555
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    |||||||||||||||| |||| |||||||||||  ||||| ||||||||||| | |||||||    
T  44296495 cgacaccgacacatatgatta-actaaattatgtcattttctcaaattattaccggtgtcgg 44296555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 24334701 - 24334781
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatg-agattttatcaaattattaacagtgtcggcgtgtcagtgtccg 129  Q
    |||||||||||||||| | |||||||||| ||||||| |  |||| |||||| |||| | ||||||| ||||| |||||||    
T  24334701 tgtccgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtcggtgtgtccgtgtccg 24334781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 8e-25; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 30404839 - 30404929
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||| |||||||| ||||||| | |||||||||| ||||||| |||||| ||||||||||||| |||||||||||||||||||||||||    
T  30404839 tgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtc 30404929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 21616813 - 21616708
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtg 161  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||| | ||||||||||||| |||||||||||| ||   |||| |||||  |||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtg 21616714  T
Q  162 cttcat 167  Q
    ||||||    
T  21616713 cttcat 21616708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 15972942 - 15972826
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtg 143  Q
    ||||| |||||||||||||||| | |||||||||| |||| ||  ||||| ||||||||||||  ||||||||||||||||||||||||||  | |||||    
T  15972942 gtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatctggtg 15972843  T
Q  144 tttgtgtttgtatccgt 160  Q
    | ||||| ||| |||||    
T  15972842 tctgtgtctgtgtccgt 15972826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 30527599 - 30527674
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||||||| || ||||||||||| |||||    
T  30527599 accgacacatataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgtcagtgtc 30527674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 18276579 - 18276461
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgt 154  Q
    |||||||||||| ||||||||||| ||||| | |||||| ||||||||||| | |||||||| | |||||||| || ||| ||  |||||  |||| |||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgt 18276480  T
Q  155 atccgtgcttcatatcttt 173  Q
    |||||||||||||||||||    
T  18276479 atccgtgcttcatatcttt 18276461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 23718087 - 23718006
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||| |||||||||||||||||||||| ||||||| || ||| ||||||||||| | ||||||| |||||||||||||||||    
T  23718087 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 23718006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 24105759 - 24105678
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||| |||||||||||||||||||||| ||||||| || ||| ||||||||||| | ||||||| |||||||||||||||||    
T  24105759 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 24105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 20539674 - 20539754
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | |||||||||||||||||  |||||| ||||||||||| | |||||| |||||||||||||||||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcg 20539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 31018653 - 31018569
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||| |||||||||||||||| ||| |||||| | ||||||||| | |||| ||||||||||||||| |||||    
T  31018653 tgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcg 31018569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 37559084 - 37558957
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgt---------gtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||| ||||||||||||||         |||  ||||||||||||||| | |||||||| | ||||||| ||||||  ||||||||||    
T  37559084 gacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattatta 37558985  T
Q  106 acagtgtcggcgtgtcagtgtccgtgtc 133  Q
     | |||||||||||||||||||||||||    
T  37558984 gctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 34784982 - 34785096
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    ||||||||||||||||||||||||||||||||| |||||| | |||  ||||   ||||||| |||||||||||||||||| || ||| ||  ||||  |    
T  34784982 cgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtgtccg 34785081  T
Q  154 tatccgtgcttcata 168  Q
    |||| ||||||||||    
T  34785082 tatctgtgcttcata 34785096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 18422022 - 18421942
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | |||||||||| ||||||| ||| || | ||||||||||  ||||||||||||||||||||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcg 18421942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 20242723 - 20242807
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| | |||  ||||   |||||||||||||||||||| |||||    
T  20242723 tgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcg 20242807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 28412395 - 28412295
Alignment:
Q  68 ataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcat 167  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||| | ||||| ||||||||||||| || ||||||  ||||   ||| ||||||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgtccatattcgtgcttcat 28412296  T
Q  168 a 168  Q
    |    
T  28412295 a 28412295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 31284120 - 31284029
Alignment:
Q  42 gtgtgtcttgtccgacaccgacacata-taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    ||||||| ||||| ||||||||||||| |||||||| |  |||||| |||||| ||||||||||| |||||||||||||| ||||| |||||    
T  31284120 gtgtgtcgtgtccaacaccgacacataataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgt 31284029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 34691801 - 34691856
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  34691801 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattatta 34691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 34714213 - 34714268
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  34714213 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattatta 34714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 5367262 - 5367200
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||    
T  5367262 tgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 16069263 - 16069333
Alignment:
Q  63 cacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||| ||||||||||| ||||||  |||||| | ||||||||||| |||||||||||||||||||||||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 21782832 - 21782890
Alignment:
Q  68 ataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    ||||||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 19536393 - 19536478
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgaga-ttttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||| | |||||||||| ||||||| || |||| |||||||||||   |||||||||||||| |||||||||||    
T  19536393 tgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcg 19536478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 35449565 - 35449500
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||||||||||||||| |||| || |||||| |||||||||||||||||| ||| |||||||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgt 35449500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 896274 - 896198
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||||| ||||||||||| |||||| | || |||| |||||| ||||| ||||| ||||||||||||||||||||    
T  896274 tgtccgacgccgacacatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt 896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 28677968 - 28677889
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| ||||||||||||||| ||||||| |||||| ||||||||||| | ||||||||||  ||||||| |||||    
T  28677968 ccgacaccga-acatataattacactgaattatgtgattttttcaaattattagcggtgtcggcgttccagtgtcagtgtc 28677889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 31808147 - 31808063
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| ||| | |||| |||||||||||||||||| ||||||| |||||| | ||||||||| | ||||||| |||||||||||    
T  31808147 tgtgtcgtgttcaacactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 2438671 - 2438795
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgt---------gtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||| |||||||         ||| |||||||||||||||| | |||||||||| ||||||| |||||| | |||||||||    
T  2438671 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattatta 2438770  T
Q  106 acagtgtcggcgtgtcagtgtccgtgt 132  Q
     | ||||| ||  ||||||||||||||    
T  2438771 gctgtgtcagc--gtcagtgtccgtgt 2438795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 14996224 - 14996303
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttat-caaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||| | |||||||||||||||||  |||||| | |||||||||| | |||||||| ||||||||||||||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtc 14996303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 18841002 - 18841093
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| |||| ||||||||||| | |||||||||| |||||||  ||||| |||||||||||   ||||| |||||||||||||| |||||    
T  18841002 tgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcg 18841093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 21624330 - 21624235
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaa-ttattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    |||||||||||||||| | |||||||||| |||||||  ||||| | ||| |||||| | ||||||||||||||||||| |||||| ||| |||||    
T  21624330 tgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgt 21624235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 37411244 - 37411323
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||| ||||||||||||| ||||| ||||||| |||||| ||||||||||| | |||||||| |||||| ||| |||||    
T  37411244 cgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 39279732 - 39279665
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcag 123  Q
    ||||||||||||||||||||||| ||||||  |||||| ||| ||||||||| |||| ||||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgtcag 39279665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 44860379 - 44860328
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattatta 44860328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 6940324 - 6940234
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| |||| || |||||||| | |||||||||| |||||||  | ||| | ||||||||| | ||||||||||||||||||||||||||    
T  6940324 gtgtcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcg 6940234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 27286299 - 27286368
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    ||||| |||||||||||| ||||||| ||| |||||||||||||| |  ||||||||| |||||||||||    
T  27286299 gacacctataattacacttaattatgtgatcttatcaaattattagcgttgtcggcgtatcagtgtccgt 27286368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 38117155 - 38117232
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||| |||| | |||||||||  || |||| |||||| ||||||||||| | |||||||||||||||||||    
T  38117155 tgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 40361744 - 40361813
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||| |||| |||||| ||| |||||||||||||||||||||  ||||| |||||||||||| ||||||    
T  40361744 gtgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattattaatagtgtc 40361813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 18420436 - 18420504
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagt 124  Q
    |||||||||| ||||||| || | ||||||| |||||| ||||||||||| |||||| |||||||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagt 18420504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 21374714 - 21374778
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| |||||||  ||||| ||||||||||| | |||||||||||| ||||||||||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 21374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 30335476 - 30335396
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||  | ||||||||||||||||||  ||||| |||||||||||   |||||||||||  |||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcg 30335396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 30717530 - 30717610
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| |||||| | |||||||||| ||||||| |||||| ||||||||||| |  ||||||  |||||||||||||||||    
T  30717530 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 32199141 - 32199213
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| || ||||||||||| ||| ||||||| |||||||||||||||||||| ||| | || ||||||||||    
T  32199141 gacactgatacatataattatacttaattatgtgattttatcaaattattaactgtgacagcatgtcagtgtc 32199213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 34337200 - 34337256
Alignment:
Q  78 taaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||| |||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  34337200 taaattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcg 34337256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 36409630 - 36409707
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||  |||||||||||||||| |||||| ||||||||| | | |||||||| ||| ||| |||||||||    
T  36409630 gacaccgacacata--attacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcg 36409707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 36756344 - 36756424
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| |||||||||||| |||||||  ||||  |||||||||||   |||||| |||||||||||| ||||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcg 36756424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 20922924 - 20922967
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagatttt 93  Q
    |||||||||| |||||||||||||||||||||||||| ||||||    
T  20922924 tgtccgacacagacacatataattacactaaattatgtgatttt 20922967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 24894433 - 24894370
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    ||||| |||| ||||||| |||||| | ||||||||| | ||||||||||||||||||||||||    
T  24894433 taattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 12668423 - 12668493
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagt 124  Q
    |||||||||||| |||||||||||| |||||||  ||||| |||||||||||    |||||||||||||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagt 12668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 42832277 - 42832355
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||| |||||||||||| || ||||  ||||| ||||||||||| | ||||||| ||||| | |||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgtctgagtccgtgtc 42832355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 2331851 - 2331773
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||| |  |||||| ||||||| |||||| ||||||||||||  ||||  |||||||| |||||||||||    
T  2331851 cgacaccgacacataaa--tacactgaattatgtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcg 2331773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 23058442 - 23058523
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttat-caaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| | ||||||||||  |||||| |||||| | |||||||||||  |||| ||||||||| |||||||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcg 23058523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 29176489 - 29176566
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| ||||| |||| |||||||||||| ||||||| ||  || ||||||||||||| ||||| |||||| ||||||    
T  29176489 tgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattattaactgtgtctgcgtgtaagtgtc 29176566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 15657923 - 15657843
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||  | |||||||||| ||||||| ||||||  ||||||||||   | |||||||||| |||||||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcg 15657843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 39323308 - 39323244
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| |||||||  ||||| ||||||||||| | |||||| ||| ||||||||||||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 5473391 - 5473336
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||||||  |||||||  ||||||| |||||| |||||||||||    
T  5473391 tgtccgacaccgacacataatattacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 18255976 - 18256031
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||| | |||||||| ||||||||| |||||| | |||||||||    
T  18255976 tgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattatta 18256031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 18622665 - 18622614
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||| |||| |||||||||||| ||||||| |||||||| |||||||||    
T  18622665 cgacaccaacacgtataattacactgaattatgtgattttattaaattatta 18622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 36281734 - 36281691
Alignment:
Q  64 acatataattacactaaattatgagattttatcaaattattaac 107  Q
    |||||| |||||||||||||||| |||||| |||||||||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattattaac 36281691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 37419802 - 37419727
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccg 129  Q
    |||||||| ||| | |||||||||| |||| || |||||| ||||||||||  |  ||||||||||||||||||||    
T  37419802 cgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 2665897 - 2665939
Alignment:
Q  63 cacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||||||||||| |||||| | |||||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaattatta 2665939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 10547933 - 10548010
Alignment:
Q  59 ccgacacatataattacactaaattatgagatttta--tcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| |||||||| |||||| ||||||  ||||||   | ||||||||||| |||||| |||||||||||||||||||    
T  10547933 ccgatacatataactacactgaattatatgatttttatttaaattattaacggtgtcgacgtgtcagtgtccgtgtcg 10548010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 11223864 - 11223942
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||| | |||||||||| |||||||  ||||| ||||| ||||| | ||||| ||||||| |||||| ||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtctgtgtccatgtc 11223942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 18889592 - 18889642
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||| |||||||| ||||||| |||||| |||| ||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttatta 18889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 21091788 - 21091706
Alignment:
Q  48 cttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||| ||||| ||||| | |||||||||| || ||||  ||||| | ||||||||| | ||||||| ||||||||||||||    
T  21091788 cttgtctgacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 22085066 - 22085012
Alignment:
Q  51 gtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||||||||||||| || ||||||||||||||||  ||||| | |||||||||    
T  22085066 gtccgacaccgacacaaatgattacactaaattatgtcattttcttaaattatta 22085012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 24011089 - 24011031
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgt 118  Q
    |||||| ||| ||||||||||||||||  ||||| ||||||||||| || |||||||||    
T  24011089 cgacacctatgattacactaaattatgtcattttctcaaattattatcaatgtcggcgt 24011031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 12940950 - 12941015
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||| ||||||  |||||| |||||||||||   |||||  |||||||||||||||||||    
T  12940950 taattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcg 12941015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 15909632 - 15909705
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| | |||||||||||||||| |||||||  ||||| ||||| | ||| | || ||||||||||||||||    
T  15909632 cgacactgtcacatataattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgtc 15909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 23354658 - 23354731
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||| ||| |||||||||||||||   ||||| ||||||||||| | ||||| || |||| |||||||||||    
T  23354658 cgacacctatgattacactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtc 23354731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 29970549 - 29970622
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| |||||||||| |||||||| || |||| |||||| ||||||||||| | |||||   |||||||||||    
T  29970549 cgacatcgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtcaatgtgtcagtgtc 29970622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 30298445 - 30298547
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    ||||||||||||||||  || |||||||| |||||||  ||||||| ||||||||| | |||||| |||||| | || ||| ||| || |||||| || |    
T  30298445 tgtccgacaccgacac--atgattacactgaattatgtcattttattaaattattatcggtgtcgacgtgtcggcgttcgtatcgtgtctggtgtctggg 30298542  T
Q  150 tttgt 154  Q
    |||||    
T  30298543 tttgt 30298547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 38355888 - 38355933
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaat 100  Q
    |||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  38355888 gacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 18589259 - 18589178
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| |||||||||| ||| ||| |||| ||  ||||| |  |||||||| |||||||||||||| ||| ||||||||    
T  18589259 tgtccgacactgacacatatagttagactgaattgtgtaattttct--aattattagcagtgtcggcgtgttagtatccgtgtc 18589178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 24975325 - 24975385
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcg 114  Q
    |||||||||| |||||| ||||||| ||||||  |||||| ||||||||||| | ||||||    
T  24975325 cgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtcg 24975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 25080946 - 25080886
Alignment:
Q  67 tataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||||| | ||||| ||| |||||||||||||| | ||| |||||||| ||||||    
T  25080946 tataattacactgacttatgtgatcttatcaaattattagcggtgccggcgtgttagtgtc 25080886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 32355452 - 32355408
Alignment:
Q  88 gattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    ||||||||||||||||||||||| ||||||| | ||| |||||||    
T  32355452 gattttatcaaattattaacagtatcggcgtattagtatccgtgt 32355408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 37497183 - 37497107
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||| |||||||||| |||| |||||| | |||| ||  ||||| ||||||||||| ||||||||  ||||||||||    
T  37497183 tgtctgacaccgacagatattattacattgaattgtggcattttctcaaattattatcagtgtcgatgtgtcagtgt 37497107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 41942152 - 41942084
Alignment:
Q  66 atataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||| ||| |||||||  ||||| ||||||| ||||| ||| | ||||||||||||| ||||||    
T  41942152 atataattatactgaattatgtaattttctcaaatttttaacggtgactgcgtgtcagtgtctgtgtcg 41942084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 458 - 575
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||||||||||||||| | |||||||||| |||| || |||||| ||||||||||| |||||||||||| |||||||||||| || ||| |||||  |||    
T  458 tgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtg 557  T
Q  150 tttgtatccgtgcttcat 167  Q
    |  |||||||||||||||    
T  558 tccgtatccgtgcttcat 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 168
Target Start/End: Complemental strand, 8867 - 8743
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtg 143  Q
    ||||| |||||||||||||||| | |||||||||||||| ||  |||||| ||||||||||| | |||||||||||||||||||||||||| ||  ||||    
T  8867 gtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtg 8768  T
Q  144 tttgtgtttgtatccgtgcttcata 168  Q
    |  ||||  |||||| |||||||||    
T  8767 tccgtgtccgtatccatgcttcata 8743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 13134509 - 13134396
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    ||||| ||||||||||||||||||||||||||| |||||| | ||||||| | ||||||||||||| ||| |||| || || |||||| ||  |||||||    
T  13134509 cgacatcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggcgtgccag-gtccatgacgtgtttggagtacgtgtttg 13134411  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  13134410 tatccgtgcttcata 13134396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 23292938 - 23293100
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgt---------gtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||| |||||||         ||| |||||||||||||||| | |||||| ||| ||||||| |||||| |||||||||||    
T  23292938 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattatta 23293037  T
Q  106 acagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
     | |||||||||||||| ||||||||||| ||  |||||  ||||  ||||| ||||||||||    
T  23293038 gctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatctgtgcttcata 23293100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 19482727 - 19482613
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    ||||||| |||| | |||||||||  ||||||| ||| || |||||||||||   ||||||||||||||||||| |||||| || |||||| |||||| |    
T  19482727 cgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcg 19482628  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  19482627 tatccgtgcttcata 19482613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 40179625 - 40179715
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||| |||||||||||||| |||||||||||||| ||||||| |||||| ||||| ||||||  |||||  ||||||||||||||||||    
T  40179625 tgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtc 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 12895265 - 12895354
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||| |||||||||||   |||||||||||||| ||| |||||||    
T  12895265 tgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcg 12895354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 14126118 - 14126191
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| |||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||| ||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcg 14126191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 35157974 - 35158063
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||| |||| ||||||||||| |||||||||||||||||||| ||||||  ||||||||||   | ||||||||||||||||||||||    
T  35157974 tgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgt 35158063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 21945619 - 21945483
Alignment:
Q  6 agaagcagagacactcctcggattaggcgtgtaccggtgt---------gtcttgtccgacaccgacacatataattacactaaattatgagattttatc 96  Q
    ||||||| ||||||||||||||||||||||||  ||||||         ||| |||||||||||||||| | |||||||||| |||||||  ||||| ||    
T  21945619 agaagcatagacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttc 21945520  T
Q  97 aaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||| | |||||||| |||||||||| |||||    
T  21945519 aaattattagctgtgtcggcatgtcagtgtctgtgtc 21945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 48139334 - 48139255
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtca 122  Q
    |||||| |||| |||| | ||||||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||    
T  48139334 tgtgtcgtgtctgacatcaacacatataattacattaaattatgagattatctcaaattattaacagtgtcgacgtgtca 48139255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 15029825 - 15029751
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||| ||||||||||||||||| ||||||| ||| || ||||||||||| ||||||| |||||||||||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 24343560 - 24343452
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccg 159  Q
    |||||| |||||||||||| |||||||  ||||| ||||||||||| | ||||||||||||| | |||||||||| ||  |||||  |||| ||| ||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 24343461  T
Q  160 tgcttcata 168  Q
    |||||||||    
T  24343460 tgcttcata 24343452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 40742650 - 40742570
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| |||||||||||||||||||| |||||  |||||| ||||||||||||  |||||||||| ||| |||||||||||    
T  40742650 cgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgtgtcg 40742570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 49431095 - 49431004
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgaga-ttttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| |||||||||||||||| | |||||||||| ||||||| || |||| ||||||||||| | |||||||||||||| |||||| ||||    
T  49431095 gtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcg 49431004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 903971 - 903905
Alignment:
Q  64 acatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||| ||| ||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgt 903905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 27706192 - 27706286
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgct 163  Q
    |||||||||||||||||| |||||| | ||||||||||  |||||| ||||||||||||| ||||| || ||||||  ||||  |||||||||||    
T  27706192 taattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccgtgct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 36635375 - 36635269
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtg 161  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||   |||| |||||||||||||||| |||| ||  ||||| |||||   ||||| ||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatccatg 36635276  T
Q  162 cttcata 168  Q
    |||||||    
T  36635275 cttcata 36635269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 2361971 - 2362048
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||||||||||||| | ||||||||||||||||||  ||||| ||||||||||| | ||||||| |||||| ||||    
T  2361971 tgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtc 2362048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 11931338 - 11931261
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||| ||||||||||| ||||||||||||||| |||||| ||| ||||||||| |||||||| || || |||||||||    
T  11931338 gacatcgacacatatatttacactaaattatgtgattttttcatattattaacggtgtcggcatggcattgtccgtgt 11931261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 30838269 - 30838192
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtg 131  Q
    ||||||||| || |||||||||||||||||||   ||||||||||||||||| |||| ||| ||| ||||||||||||    
T  30838269 cgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtccgtg 30838192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 54580013 - 54580074
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||| |||||||||||||||| |||||||||||| ||||||| |||||| |||||||||||    
T  54580013 gtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 12797334 - 12797417
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||| | |||||||||| ||||||| |||||| |||||||||||    || ||||||||||||||||||||||    
T  12797334 tgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattagttttgccggcgtgtcagtgtccgtgtcg 12797417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 20521875 - 20521939
Alignment:
Q  80 aattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgt 144  Q
    ||||||| |||||||||||||||||| | || ||||||||||||||||||||||| || ||||||    
T  20521875 aattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtctggtgt 20521939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 30299006 - 30298926
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttat-caaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||| | |||||||||| |||||||  ||||| | |||||||||| | |||||||||||||||||||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 30327874 - 30327794
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttat-caaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||| | |||||||||| |||||||  ||||| | |||||||||| | |||||||||||||||||||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 5775359 - 5775410
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaa 106  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattattaa 5775410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 13783340 - 13783261
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||| |||||||||||||||| |||| || ||| || |||||| |||| | ||||||| |||||||||||||||||    
T  13783340 cgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtc 13783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 22440609 - 22440680
Alignment:
Q  63 cacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||| ||||||  || ||||||||| |||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgtcg 22440680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 40613504 - 40613441
Alignment:
Q  59 ccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtca 122  Q
    |||||||||||||||||||| ||||||| |||||| ||||| ||||| | ||||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 44081584 - 44081691
Alignment:
Q  61 gacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgt 160  Q
    |||||||||||||||| ||||||||  |||||| |||||||||||||  | |||| |||||||||||| ||||| ||  | |||| ||||  ||||| ||    
T  44081584 gacacatataattacattaaattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttcgtgtccgtatcggt 44081683  T
Q  161 gcttcata 168  Q
    ||||||||    
T  44081684 gcttcata 44081691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 8423709 - 8423779
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    |||| |||||||||||||||  |||||||||||| ||||||| |||||| ||||||||||| | |||||||    
T  8423709 tgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 10499258 - 10499347
Alignment:
Q  42 gtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||||  ||||||||| |||||||||||||||||||||||||| |||||| |||| || |||   ||||||| ||||||||||| ||||    
T  10499258 gtgtgtcgggtccgacactgacacatataattacactaaattatgtgattttctcaagtt-ttagatgtgtcggtgtgtcagtgtcagtgt 10499347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 15659760 - 15659818
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgt 112  Q
    ||||||| ||||||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  15659760 cgacaccaacacatataattacaccgaattatgagattttctcaaattattagcagtgt 15659818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 33950199 - 33950081
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtg 149  Q
    |||| ||||||||||||||| |||||| ||||||||| |||||| ||||||||||| | | || |  |||||||||| |||||   || ||||||  |||    
T  33950199 tgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattattagcggcgttgaagtgtcagtgttcgtgttatgtctggtgtccgtg 33950100  T
Q  150 tttgtatccgtgcttcata 168  Q
    || ||| ||||||||||||    
T  33950099 ttcgtacccgtgcttcata 33950081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 35723384 - 35723458
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgag-attttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| |||||||||||||||| | ||||||| | ||||| ||||||||||| | |||||||||||||||||||    
T  35723384 cgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 6485613 - 6485690
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| | |||||||||||||||||| |||||| ||||||||||||   |||| ||||||  |||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaattttgtctgcgtgtaggtgtccgtgtc 6485690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 22234890 - 22234967
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgaga-ttttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    ||||||||||||||| ||||||||| ||||||| || |||| ||||||| ||| | ||||||||||||| ||||||||    
T  22234890 cgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccgt 22234967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 16303266 - 16303342
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||||| | |||||||||||||||||   ||||| ||||| ||||| |  |||||||||||||||||||||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgt 16303342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 18743938 - 18743863
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||| |||||||||||| | ||| |  || ||||||||||||||||||||| ||||||| |||||||||||||    
T  18743938 cgacaccggcacatataattata-taagtactgtgattttatcaaattattaacaatgtcggcatgtcagtgtccgt 18743863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 26504303 - 26504378
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||||||||||||| || |||  |||||| | ||||||||| ||||||||  || ||||||||||||||    
T  26504303 accgacacatataattacactgaactatttgattttcttaaattattagcagtgtcgatgtttcagtgtccgtgtc 26504378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 34306794 - 34306876
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| |||||||||||||||| | ||||||||||| |||||  |||||| |||||||||||   |||||||||| ||||||||    
T  34306794 gtgtcgtgtccgacaccgacacttgtaattacactacattatctgatttt-tcaaattattagttgtgtcggcgtatcagtgtc 34306876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 35952617 - 35952684
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||| || ||||||||||||| | ||||||  |||||||||||||||||| ||||| |||||||||    
T  35952617 cgacactgatacatataattacattgaattatatgattttatcaaattattagcagtggcggcgtgtc 35952684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 36409512 - 36409578
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||||||||| |||||||||||||||||||| || ||| || |||||||||  |||||||||||||    
T  36409512 cgacaccgacacctataattacactaaattatgtgactttttc-aattattaatggtgtcggcgtgtc 36409578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 36423678 - 36423744
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||||||||| |||||||||||||||||||| || ||| || |||||||||  |||||||||||||    
T  36423678 cgacaccgacacctataattacactaaattatgtgactttttc-aattattaatggtgtcggcgtgtc 36423744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 3947766 - 3947844
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    |||||| ||||| | |||||||||| ||||||| |||||| ||||||||||| | |||||||| |||| ||||| ||||    
T  3947766 cgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgt 3947844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 4157219 - 4157158
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||| |||||||||||||||| | ||||| |||||||||||| |||||| |||||||||||    
T  4157219 tgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt-tcaaattatta 4157158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 7214523 - 7214573
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||| |||||||||||| ||||||||| |||||| |||||||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattatta 7214573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 16073457 - 16073380
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtcc 128  Q
    |||||||||||||||| | |||||||||| ||||||| |||||| |||||||||||   |||| |||||||||| ||||    
T  16073457 tgtccgacaccgacacttgtaattacactgaattatgcgatttt-tcaaattattacttgtgttggcgtgtcagagtcc 16073380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 20633508 - 20633430
Alignment:
Q  90 ttttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccgtgcttcata 168  Q
    |||| ||||||||||| | |||||| ||||||||||||||| ||| || ||||||  ||||  ||||||||||||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcata 20633430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 28964237 - 28964299
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||| |||||||||| ||||| | |||||||||| ||||||| |||||| |||||||||||    
T  28964237 tgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 29205514 - 29205452
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    |||||| ||||| |||||||||| | |||||||||| ||||||| |||||| |||||||||||    
T  29205514 tgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 7012123 - 7012046
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||| || ||| || ||||| |||||||  ||||| ||||||||||| | ||||||||||||| |||||||||||    
T  7012123 acaccgatacctatgatcacactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgtgtc 7012046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 9996903 - 9996838
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcgg 115  Q
    |||| |||||||| ||||||||||| ||| ||||||| |||||| ||||||||||  |||||||||    
T  9996903 tgtctgacaccgagacatataattatactgaattatgtgattttctcaaattattgtcagtgtcgg 9996838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 21539879 - 21539940
Alignment:
Q  66 atataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||||||||||||  |||||| | ||||||||||  |||||||| ||||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagtgtc 21539940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 46160955 - 46160882
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||||||||||||||| ||||| |||||||  ||||| ||| ||| ||||| | ||||||||||| |||||    
T  46160955 cgacaccgacacatataataacactgaattatgttattttctcatatttttaacggcgtcggcgtgtctgtgtc 46160882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 5414172 - 5414252
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||| |||||||||||||||  ||| || |||||| | |||  |||| | ||||||||||||| ||||||||||||    
T  5414172 cgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcg 5414252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 20743286 - 20743350
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||| ||| |||||||| |||||||  ||||| ||||||||||| | ||||||||||||||||||    
T  20743286 acacctatgattacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 12895116 - 12895194
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||||| | |||||||  | ||||||| |||||| ||||||||||| | || |||||||||| |||||||||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgtgtc 12895194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 16189772 - 16189721
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaatt 101  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||| |||||||    
T  16189772 tgtccgtcaccgacacacataattacactgaattatgtgattttctcaaatt 16189721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 21720508 - 21720559
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaa 106  Q
    |||||||||| ||||| ||||| ||||||||  |||||||||||||||||||    
T  21720508 gacaccgacatatatagttacattaaattatatgattttatcaaattattaa 21720559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 30982878 - 30982988
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||| |||||||||||| || |||| |||||| |||||| |||| | ||   |||||||| ||||||||||||  |  |||||   |||| |    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtatccggtgtccatgttcg 30982974  T
Q  154 tatccgtgcttcat 167  Q
    ||||||||||||||    
T  30982975 tatccgtgcttcat 30982988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 4157506 - 4157456
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagatttt 93  Q
    |||||| |||||||||||||||| | ||||| |||||||||||| ||||||    
T  4157506 tgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 4672083 - 4672149
Alignment:
Q  52 tccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgt 118  Q
    |||||||||||||||||||  |||||| |||||||  |||||  |||||||||| | ||||||||||    
T  4672083 tccgacaccgacacatatagctacactgaattatgtaattttcccaaattattagctgtgtcggcgt 4672149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 46083991 - 46084029
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattt 92  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  46083991 cgacaccgacacatataattacactagattatgtgattt 46084029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 999354 - 999399
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||||||  |||||  |||||||||||    
T  999354 cgacacatataattacactaaattatatgatttactcaaattatta 999399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 11596352 - 11596425
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||||| |||| | |||||||||| ||||||| |||||| ||||||||||| |  ||| ||||| ||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtc 11596425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 12077861 - 12077808
Alignment:
Q  80 aattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||| |||||| |||||||||||||||| | | ||||||||||| ||||||    
T  12077861 aattatgtgattttctcaaattattaacagtattgacgtgtcagtgttcgtgtc 12077808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 12628619 - 12628664
Alignment:
Q  88 gattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||| ||||||||||||| |||||||| |||||||||| |||||    
T  12628619 gattttttcaaattattaactgtgtcggcatgtcagtgtcagtgtc 12628664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 30103358 - 30103406
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattatt 104  Q
    ||||||||||||||| |||||||| ||||||| |||||| ||||||||||    
T  30103358 gacaccgacacatatgattacact-aattatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 40481680 - 40481616
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||| ||||||| |||||| |||||||||||   || |||||||||||||||| ||||||    
T  40481680 taattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcg 40481616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 42640592 - 42640513
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgaga---ttttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||||||||||||| | |||||||||| ||||||| ||   |||| ||||||||| | | ||||||||||||| ||||    
T  42640592 tgtccgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgtgtccgtgt 42640513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 4100023 - 4099953
Alignment:
Q  54 cgacaccgacacatataatta---cactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||||||||||||||||||   |||||||||||| |||| | ||||||| ||||  ||||| |||||||    
T  4100023 cgacaccgacacatataattattacactaaattatgtgattgtctcaaatttttaatggtgtcagcgtgtc 4099953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 9299056 - 9299127
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    ||||| |||||||||||||||||| ||| ||   ||||| ||||||||||| || ||| ||||||||||||||    
T  9299056 gacactgacacatataattacacttaat-atattattttctcaaattattagcaatgttggcgtgtcagtgtc 9299127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 18576038 - 18576086
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattat 103  Q
    |||||| ||||||||||||||||  ||||||| |||||| |||||||||    
T  18576038 gacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 241653 - 241573
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||  ||||||||||||||||||| ||||||  |||||||||| | ||||||||||||||||||||||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcg 241573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 46741 - 46627
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||  | |||||||||| ||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||| ||  | |||  ||||  |    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccg 46642  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  46641 tatccgtgcttcata 46627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 1714 - 1630
Alignment:
Q  43 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtc 127  Q
    |||||| |||||||||||||||| |||||||| || |||||||  |||||| ||||||||||||| ||||||||||||| |||||    
T  1714 tgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtctgtgtc 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 20231 - 20151
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||| | |||||||||| ||||||| |||||| ||||||||||| | |||||||||||||| |||||||||||    
T  20231 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcg 20151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 21098 - 20990
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatc 157  Q
    ||||||||||||||||| ||  | ||||| |||||| ||||||||||||| ||||| || ||||||||||||||||| || ||||||  ||||| |||||    
T  21098 accgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgtatc 20999  T
Q  158 cgtgcttca 166  Q
     ||| ||||    
T  20998 tgtgtttca 20990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 28948 - 28832
Alignment:
Q  15 gacactcctcggattaggcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcg 114  Q
    |||||||| |||||||||| ||| || || |||||    | ||||||||||||||||||||| | ||||||| |||||| | ||||||||||| ||||||    
T  28948 gacactccccggattaggcatgtccccgtatgtctgacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcg 28849  T
Q  115 gcgtgtcagtgtccgtg 131  Q
    |||||| ||||| ||||    
T  28848 gcgtgttagtgttcgtg 28832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 51855 - 51791
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    |||||||||| ||||||| |||||| ||||||||||| | |||||||||||||||||||||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 70347 - 70259
Alignment:
Q  44 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgt 132  Q
    ||||| |||||||||||||||| |||||||||||| |||||||  ||||| ||||||||||||| |||||| | |||| ||||| ||||    
T  70347 gtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtctgtgt 70259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 135312 - 135392
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||||||||||||||||||||||  ||||||| |||||| ||||||||||| ||||||||| ||||  ||||| ||||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtcg 135392  T

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Target: scaffold0021 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 57 - 168
Target Start/End: Complemental strand, 130538 - 130427
Alignment:
Q  57 caccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtat 156  Q
    ||||||||| | |||||||||| ||||||| |||||| ||||| ||||||| |||||||| ||||| ||||||||||| ||  |||||  ||||  ||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtat 130439  T
Q  157 ccgtgcttcata 168  Q
    || |||||||||    
T  130438 ccatgcttcata 130427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 13460 - 13380
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||| | | ||||| |||| ||||||| |||||| |||||||||||   |||||||||||||||||||||||||    
T  13460 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 23479 - 23399
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| |||||||||||| ||||||| |||||| |  | |||||| | ||||||||||||||||||| ||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcg 23399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 23570 - 23497
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgaga-ttttatcaaattattaacagtgtcggcgtgtcagtgt 126  Q
    |||||| ||||| |||||||||||| ||||||| || |||| | || |||||||| ||||||| ||||||||||    
T  23570 cgacactgacacttataattacactgaattatgtgattttttttaagttattaactgtgtcggtgtgtcagtgt 23497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 21867 - 21947
Alignment:
Q  53 ccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtc 133  Q
    ||||||||||| | | ||||| |||| ||||||| |||||| |||||||||||   |||||||||||||||||||||||||    
T  21867 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 178819 - 178899
Alignment:
Q  55 gacaccgacacatataattacactaaattatga-gattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    ||||| ||||| | |||||||||| |||||||| |||||| |||||||||||   ||||||||||||||||||||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcg 178899  T

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Target: scaffold0018; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 192264 - 192325
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||  |||||||  ||||| ||||||||||||| ||||||||||||||||||||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 263372 - 263452
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||| |||||||||||| ||||||| | |||| ||||||||||| |||||| | | |||||||||||||||||    
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcg 263452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 168
Target Start/End: Original strand, 225274 - 225382
Alignment:
Q  60 cgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttgtatccg 159  Q
    |||||| |||||||||| |  ||||||  ||||| ||||||||||| | |||||||||||||||||||||||||| ||  |||||  |||| ||| ||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 225373  T
Q  160 tgcttcata 168  Q
    || ||||||    
T  225374 tgtttcata 225382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 25768 - 25827
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    |||||||||||| |||||||||||||||||||| |||||| || |||||||||| |||||    
T  25768 cgacaccgacacttataattacactaaattatgtgattttctctaattattaaccgtgtc 25827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 92851 - 92790
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    |||||||||| |||||||  ||||| ||||||||||| | ||||||||||||||||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 7028 - 7108
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgt 130  Q
    ||||||||||| |||| | |||||| |||||||||||  ||||| ||||||||||| | |||||| ||| |||||||||||    
T  7028 tgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtccgt 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 3849 - 3929
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||| ||||| | |||||||||| ||||||| |||||| | ||||||||||| |||||||| | |||||||| ||||||    
T  3849 cgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcg 3929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 90906 - 90822
Alignment:
Q  50 tgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| |||| ||||| ||||||||||||| ||||||  |||||| ||||||||||||  |||| || ||||||||||| ||||||    
T  90906 tgtctgacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcg 90822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 6371 - 6312
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtc 113  Q
    ||||||||||||||||||||||| | |||||||  ||||| ||||||||||| |||||||    
T  6371 cgacaccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtc 6312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 9747 - 9798
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||||||||||||||||| ||||| | |||||| |||||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 1092 - 1014
Alignment:
Q  56 acaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||| |||||||||| ||||||| |||||||  ||||| ||||||||||| | ||||||| ||||||| ||| ||||||    
T  1092 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcg 1014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 9957 - 9843
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||||||||||||||||||||||  ||| |  |||||| | |||  |||| | ||||||||||||| |||||| ||||| ||  |||||  ||||  |    
T  9957 cgacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgtgtccg 9858  T
Q  154 tatccgtgcttcata 168  Q
    |||||||||||||||    
T  9857 tatccgtgcttcata 9843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 53236 - 53170
Alignment:
Q  57 caccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcag 123  Q
    ||||||||| |||||||||||| ||||||| |||||| ||||||||||  | || ||||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 17750 - 17800
Alignment:
Q  55 gacaccgacacatataattacactaaattatgagattttatcaaattatta 105  Q
    ||||||||||| | |||||||||||||||||| |||||| |||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 17800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 8725 - 8645
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||||| |||||||| ||| || |||| ||||||   |||||||||  ||||||| ||||||||||||| |||||    
T  8725 cgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcg 8645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 8077 - 8002
Alignment:
Q  45 tgtcttgtccgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||| |||||||||||||||| | ||||||||||  |||||  |||||| |||||||||||   |||||||||||||    
T  8077 tgtcgtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtc 8002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 23829 - 23753
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgaga-ttttatcaaattattaacagtgtcggcgtgtcagtgtccg 129  Q
    |||||||||||| | |||||||||| ||||||| || |||| ||||||||||||| ||| | | |||||||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgtgtcagtgtccg 23753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 7319 - 7378
Alignment:
Q  62 acacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||| |||||||||||||||||||| ||||||  ||||||||||   |||||||||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtc 7378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 44529 - 44572
Alignment:
Q  58 accgacacatataattacactaaattatgagattttatcaaatt 101  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatt 44572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 68242 - 68357
Alignment:
Q  54 cgacaccgacacatataattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcgagtttggtgtttgtgtttg 153  Q
    |||||| ||||| |||||||| ||||||||||  |||||| ||||||||||||| |||     |||||||| | | ||| | ||||||||| ||| ||||    
T  68242 cgacactgacacctataattatactaaattatatgattttctcaaattattaacggtgctaatgtgtcagtattcatgttgtgtttggtgtctgtttttg 68341  T
Q  154 tatccgtgcttcatat 169  Q
    |||  |||||||||||    
T  68342 tatttgtgcttcatat 68357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 19619 - 19555
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtcagtgtccgtgtcg 134  Q
    |||||||||| ||||||| |||||| |||||||||||   || |||||||||||||||| ||||||    
T  19619 taattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcg 19555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 14574 - 14522
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||||||| ||||||| |||||| |||||||||||   |||||||||||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 14522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 33378 - 33430
Alignment:
Q  69 taattacactaaattatgagattttatcaaattattaacagtgtcggcgtgtc 121  Q
    |||||||||| |||||||  ||||| ||||||||||| | |||||||||||||    
T  33378 taattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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