View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21486_high_5 (Length: 422)

Name: NF21486_high_5
Description: NF21486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21486_high_5
NF21486_high_5
[»] chr4 (7 HSPs)
chr4 (267-422)||(4849816-4849970)
chr4 (263-422)||(4847259-4847406)
chr4 (206-259)||(4850533-4850587)
chr4 (120-201)||(54628424-54628505)
chr4 (144-201)||(5188273-5188330)
chr4 (364-405)||(5188530-5188571)
chr4 (117-210)||(11960075-11960168)
[»] chr5 (3 HSPs)
chr5 (26-201)||(39292932-39293107)
chr5 (120-201)||(31079751-31079832)
chr5 (120-197)||(24153974-24154051)
[»] chr2 (8 HSPs)
chr2 (99-201)||(35567912-35568013)
chr2 (93-192)||(30957694-30957794)
chr2 (144-203)||(35566967-35567026)
chr2 (114-177)||(45397372-45397435)
chr2 (144-202)||(28401491-28401549)
chr2 (114-180)||(28402048-28402114)
chr2 (121-198)||(26179622-26179699)
chr2 (121-201)||(2758461-2758541)
[»] chr7 (4 HSPs)
chr7 (89-193)||(38178692-38178795)
chr7 (120-201)||(24555974-24556055)
chr7 (89-178)||(39436138-39436227)
chr7 (142-201)||(38178069-38178128)
[»] chr8 (3 HSPs)
chr8 (103-180)||(6074914-6074991)
chr8 (105-152)||(34404709-34404756)
chr8 (120-207)||(7043094-7043181)
[»] chr1 (3 HSPs)
chr1 (110-200)||(13832268-13832358)
chr1 (144-201)||(20290480-20290537)
chr1 (120-201)||(52282265-52282346)
[»] scaffold0667 (1 HSPs)
scaffold0667 (88-201)||(2678-2791)
[»] chr6 (2 HSPs)
chr6 (120-201)||(9880572-9880653)
chr6 (120-201)||(12029327-12029408)
[»] chr3 (2 HSPs)
chr3 (119-201)||(51489852-51489934)
chr3 (118-202)||(13157045-13157129)
[»] scaffold0002 (1 HSPs)
scaffold0002 (118-202)||(149859-149943)


Alignment Details
Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 267 - 422
Target Start/End: Complemental strand, 4849970 - 4849816
Alignment:
Q  267 aaaaaatggagatgataaaaaataagaagattttaactccaaaatcagacaaacaagacctcaatcttttgactaattgcattcggcattgataattaat 366  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||| |||||||||||| |||||||||||  |||    
T  4849970 aaaaaatggagatgataaaaaataagaagatcttaactccaaaatcagacaaacaaaacctcaattattttactaattgcatttggcattgataaacaat 4849871  T
Q  367 tctttaaagtatatcacttttaaaaaagtctaccgcactcaccctgagagcagtga 422  Q
    |||| ||||||||||||||||||||||   ||||||||||| ||||||||||||||    
T  4849870 tcttaaaagtatatcacttttaaaaaatcgtaccgcactca-cctgagagcagtga 4849816  T

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Target: chr4; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 263 - 422
Target Start/End: Complemental strand, 4847406 - 4847259
Alignment:
Q  263 atagaaaaaatggagatgataaaaaa-taagaagattttaactccaaaatcagacaaacaagacctcaatcttttgactaattgcattcggcattgataa 361  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||    
T  4847406 atagtaaaaatggagatgataaaaaaataagaagattttaactccaaaatcagacaaaca------------tttgactaattgcattcggcattgataa 4847319  T
Q  362 ttaattctttaaagtatatcacttttaaaaaagtctaccgcactcaccctgagagcagtga 422  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  4847318 ttaattcttaaaagtatatcacttttaaaaaagcgtaccgcactca-cctgagagcagtga 4847259  T

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Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 4850587 - 4850533
Alignment:
Q  206 aataattgaacccaccaaatatcatattaatatatttata-ttctgataatctta 259  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  4850587 aataattagacccaccaaatatcatattaatatatttatatttctgataatctta 4850533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 54628505 - 54628424
Alignment:
Q  120 taagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    ||||||||||||||||  ||||| ||||||||| |||||| | |||  |||||||||| |||| ||||||||| ||||||||    
T  54628505 taagggaggttagtgtcgattttaaaactagagggggtgtctttgtaatttaaagaaaacttaagggaggtgactgtaattt 54628424  T

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Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 5188330 - 5188273
Alignment:
Q  144 aaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    ||||||||| |||| ||||||||||||||||| |||| | | ||||||||||||||||    
T  5188330 aaactagagggggtatatgtgttgtttaaagagacctcaagagaggtgagtgtaattt 5188273  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 5188530 - 5188571
Alignment:
Q  364 aattctttaaagtatatcacttttaaaaaagtctaccgcact 405  Q
    ||||||| |||||||||||||||||||||||  |||||||||    
T  5188530 aattcttaaaagtatatcacttttaaaaaagcgtaccgcact 5188571  T

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Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 11960168 - 11960075
Alignment:
Q  117 aaataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaatttatccaataa 210  Q
    |||||||||||||| ||||| | ||| ||||||||| |||||| |||| | |||||  |||||| | ||||||| | ||||||||  |||||||    
T  11960168 aaataagggaggtttgtgtttagtttaaaactagagggggtgtttgtgctatttaactaaacctcaagggaggttaatgtaatttgcccaataa 11960075  T

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Target: chr5 (Bit Score: 69; Significance: 8e-31; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 26 - 201
Target Start/End: Original strand, 39292932 - 39293107
Alignment:
Q  26 gatagacaaacaaacttccacggcatcaaagaagttaacagactgtta-cagagctatcatgcaaagggaggtgtatgttaattaaagaaacaaataagg 124  Q
    ||||||||||||| ||| ||| |||||||| ||||||||||||| ||| ||||| || ||| ||| ||||||| |||||||||||| |||||||||||||    
T  39292932 gatagacaaacaacctttcactgcatcaaataagttaacagactattaacagagttaacatacaa-gggaggtatatgttaattaatgaaacaaataagg 39293030  T
Q  125 gaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    || || |||||||||||||||||||||  | || ||   | ||||||||||||| || |||||||||| ||||||||    
T  39293031 gatgtaagtgttcatttttaaactagaaggtgtatacacgctgtttaaagaaactttcggggaggtgactgtaattt 39293107  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 31079751 - 31079832
Alignment:
Q  120 taagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    |||||||||||| |||||||||| |||||||||| |||||  |||   ||| || |||||||||||||||| |||| |||||    
T  31079751 taagggaggttaatgttcattttaaaactagagaaggtgttagtgccattttaataaaccttaggggaggtaagtgcaattt 31079832  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 24153974 - 24154051
Alignment:
Q  120 taagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgta 197  Q
    |||||||||||| ||||  |||| ||||||||| |||| ||  |||  ||| || |||||||||||||||||||||||    
T  24153974 taagggaggttaatgttagttttaaaactagagggggtctaactgtcattttaataaaccttaggggaggtgagtgta 24154051  T

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Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 35567912 - 35568013
Alignment:
Q  99 tatgttaattaaagaaacaaataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaa 198  Q
    ||||||||||||||||||||||||||||||| | |||| ||||||||||||||| |||| |||||||||||||||||||||  ||||| |||||||||||    
T  35567912 tatgttaattaaagaaacaaataagggaggtcaatgttaatttttaaactagag-gggtctatgtgttgtttaaagaaacccgaggggtggtgagtgtaa 35568010  T
Q  199 ttt 201  Q
    |||    
T  35568011 ttt 35568013  T

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Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 30957794 - 30957694
Alignment:
Q  93 gaggtgtatgttaattaaagaaacaaataagggaggttagtgttcatttttaaactaga-gagggtgtatgtgttgtttaaagaaaccttaggggaggtg 191  Q
    ||||| |||||||||||   ||||||||||||||||| | |||||| |||||||||||| || ||| ||| |||||||||||||||||| | ||||||||    
T  30957794 gaggtatatgttaattaggaaaacaaataagggaggtaaatgttcaattttaaactagaggaaggtctatatgttgtttaaagaaacctcaagggaggtg 30957695  T
Q  192 a 192  Q
    |    
T  30957694 a 30957694  T

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Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 35567026 - 35566967
Alignment:
Q  144 aaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaatttat 203  Q
    ||||||||| | || |||||||| |||| ||||||||||||||||||||||| |||||||    
T  35567026 aaactagagggtgtatatgtgttttttagagaaaccttaggggaggtgagtgcaatttat 35566967  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 45397435 - 45397372
Alignment:
Q  114 aacaaataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaa 177  Q
    |||||||||||||||| | ||||||||| |||||||||| |||| | |||||| ||||||||||    
T  45397435 aacaaataagggaggtcaatgttcatttctaaactagagggggtttgtgtgttatttaaagaaa 45397372  T

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Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 28401549 - 28401491
Alignment:
Q  144 aaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattta 202  Q
    ||||||||| |||| | |||||||||||||||||||| | || ||||||||||||||||    
T  28401549 aaactagagggggtctctgtgttgtttaaagaaacctcaaggaaggtgagtgtaattta 28401491  T

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Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 28402048 - 28402114
Alignment:
Q  114 aacaaataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaacct 180  Q
    |||||||||||||||| | | ||||||| |||||||||| |||| | |||||| |||||||||||||    
T  28402048 aacaaataagggaggtcaatattcatttctaaactagagggggtttgtgtgttatttaaagaaacct 28402114  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 26179622 - 26179699
Alignment:
Q  121 aagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaa 198  Q
    |||||||||| ||||| | ||| ||||||||| |||||| |||||| |||||  |||||| | |||||||||||||||    
T  26179622 aagggaggtttgtgtttagtttaaaactagagggggtgtttgtgttatttaagaaaacctcaagggaggtgagtgtaa 26179699  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 2758461 - 2758541
Alignment:
Q  121 aagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    |||||||||||||||| | ||| ||| ||||| || |||  ||||| |||||  | |||||| ||||||||||||||||||    
T  2758461 aagggaggttagtgtttagtttaaaattagaggggatgttagtgttatttaagaagaccttaagggaggtgagtgtaattt 2758541  T

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Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 38178692 - 38178795
Alignment:
Q  89 aagggaggtgtatgttaattaaagaaacaaataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggag 188  Q
    ||||||||||| ||| ||||| | ||| |||||||||||||||||||||||||||||||||||| ||||  |||||||||||||  ||||||||||||||    
T  38178692 aagggaggtgtgtgtcaattatataaataaataagggaggttagtgttcatttttaaactagag-gggtccatgtgttgtttaagaaaaccttaggggag 38178790  T
Q  189 gtgag 193  Q
    |||||    
T  38178791 gtgag 38178795  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 24555974 - 24556055
Alignment:
Q  120 taagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    |||||||||||| |||  ||| ||||||||||| |||||| ||||| |||| || |||||| ||||||||| ||||||||||    
T  24555974 taagggaggttaatgtctattattaaactagagggggtgtttgtgtcgtttgaacaaacctcaggggaggttagtgtaattt 24556055  T

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Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 39436138 - 39436227
Alignment:
Q  89 aagggaggtgtatgttaattaaagaaacaaataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaac 178  Q
    ||||||||| | ||||||||| ||||||||||||||||||| | |||||| || |||| ||||| |||| | | |||| | |||||||||    
T  39436138 aagggaggtatgtgttaattagagaaacaaataagggaggtcaatgttcaattctaaattagagggggtttttatgttatataaagaaac 39436227  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 38178128 - 38178069
Alignment:
Q  142 ttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    ||||| ||||| |||| ||||||||||||||  |||||| ||||||||| ||||||||||    
T  38178128 ttaaaatagagggggtttatgtgttgtttaagaaaacctgaggggaggttagtgtaattt 38178069  T

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Target: chr8 (Bit Score: 54; Significance: 7e-22; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 6074991 - 6074914
Alignment:
Q  103 ttaattaaagaaacaaataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaacct 180  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| || |||| | ||||||||||||||||||||    
T  6074991 ttaattaaagaaacaaataagggaggtcaatgttcatttttaaactaaagggggtctttgtgttgtttaaagaaacct 6074914  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 34404756 - 34404709
Alignment:
Q  105 aattaaagaaacaaataagggaggttagtgttcatttttaaactagag 152  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  34404756 aattagagaaacaaataagggaggttgatgttcatttttaaactagag 34404709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 7043181 - 7043094
Alignment:
Q  120 taagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaatttatccaa 207  Q
    |||||||||||| | |||||||| |||||||||  |||||  |||   ||| || ||||||||||||||||||||| ||||| |||||    
T  7043181 taagggaggttaatattcattttaaaactagaggtggtgttagtgccattttaataaaccttaggggaggtgagtgcaatttctccaa 7043094  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 13832268 - 13832358
Alignment:
Q  110 aagaaacaaataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaatt 200  Q
    |||||| ||||||||||||| | |||||||||||||||||||| || | |||| ||| |||||| |||| ||| ||||||| | |||||||    
T  13832268 aagaaataaataagggaggtcaatgttcatttttaaactagaggggatctatgcgttatttaaaaaaactttaagggaggtcaatgtaatt 13832358  T

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Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 20290537 - 20290480
Alignment:
Q  144 aaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    |||||||||||||||| |||||| ||||| ||||||| ||||||||| ||||||||||    
T  20290537 aaactagagagggtgtttgtgttatttaaggaaacctcaggggaggtcagtgtaattt 20290480  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 52282346 - 52282265
Alignment:
Q  120 taagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    |||||||||||| |||  ||| | |||||||||||| ||| |||||||||| || |||||| ||||||||| ||||||||||    
T  52282346 taagggaggttaatgtctattataaaactagagaggatgtttgtgttgtttgaacaaacctcaggggaggttagtgtaattt 52282265  T

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Target: scaffold0667 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 2791 - 2678
Alignment:
Q  88 aaagggaggtgtatgttaattaaagaaacaaataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttagggga 187  Q
    |||||||||||| ||| | |||||||||  | |||||||||| | ||||||||||||||||||||  ||||| |||||  ||||| || ||||   | ||    
T  2791 aaagggaggtgtgtgtcagttaaagaaatcagtaagggaggtcaatgttcatttttaaactagaggtggtgtttgtgtcatttaaggatacctcgagcga 2692  T
Q  188 ggtgagtgtaattt 201  Q
    ||||||||||||||    
T  2691 ggtgagtgtaattt 2678  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 9880653 - 9880572
Alignment:
Q  120 taagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    ||||||||||| ||||  ||||| ||||||||| |||||| | |||| |||||||||| || | ||||||||||||||||||    
T  9880653 taagggaggttggtgtctattttaaaactagagggggtgtctttgttatttaaagaaaactcaagggaggtgagtgtaattt 9880572  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 12029408 - 12029327
Alignment:
Q  120 taagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    ||||||| |||| |||||||||| ||||||||||||||||  ||||  ||| || |||  ||||| |||||||||| |||||    
T  12029408 taagggatgttaatgttcattttgaaactagagagggtgttagtgtcattttaataaattttaggagaggtgagtgcaattt 12029327  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 51489852 - 51489934
Alignment:
Q  119 ataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattt 201  Q
    ||||||||||||| | |||||||| ||||||||| ||||||  |||   ||| || ||||||||||||||||||||| |||||    
T  51489852 ataagggaggttaatattcattttaaaactagagggggtgttagtgccattttaataaaccttaggggaggtgagtgcaattt 51489934  T

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Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 13157129 - 13157045
Alignment:
Q  118 aataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattta 202  Q
    |||||||||||| | |||||| || ||||||||||  ||| | |||||| |||||| |||  |||||| ||||||||||||||||    
T  13157129 aataagggaggtgaatgttcagttctaaactagaggaggtttgtgtgttatttaaaaaaaatttagggaaggtgagtgtaattta 13157045  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 149859 - 149943
Alignment:
Q  118 aataagggaggttagtgttcatttttaaactagagagggtgtatgtgttgtttaaagaaaccttaggggaggtgagtgtaattta 202  Q
    |||||||||||| | |||||| || ||||||||||  ||| | |||||| |||||| |||  |||||| ||||||||||||||||    
T  149859 aataagggaggtgaatgttcagttctaaactagaggaggtttgtgtgttatttaaaaaaaatttagggaaggtgagtgtaattta 149943  T

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