View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21489_low_5 (Length: 279)
Name: NF21489_low_5
Description: NF21489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21489_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 19 - 254
Target Start/End: Complemental strand, 43994547 - 43994312
Alignment:
| Q |
19 |
ggaatacccctttggtcaacatttcggtgttaagacttaatagtgtataatctccaaatcaaattccacataagaatctccaaagtgcaaacatcaaata |
118 |
Q |
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| T |
43994547 |
ggaatacccctttggtcatcatttcggtgttaagacttaatagtgtataatctccaaatcaaattccacataagaatctccaaagtgcaaacatcaaata |
43994448 |
T |
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| Q |
119 |
tatttcacgtaacattaaaaacctgacatctccacaacaagacttgaaaattttaatacaacatagaaagaagtaaaattataaaatagaacagaataca |
218 |
Q |
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| T |
43994447 |
tatttcacgtaacattaaaaacctgacatctccacaacaagacttgaaaattttaatacaacatagaaagaagtaaaattataaaatagaacagaataca |
43994348 |
T |
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| Q |
219 |
ctagaaggtcgttacagggatcacaactcaaaaagg |
254 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43994347 |
ctagaaggtcgttacagggatcacaactcaaaaagg |
43994312 |
T |
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