View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21493_high_2 (Length: 567)
Name: NF21493_high_2
Description: NF21493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21493_high_2 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 537; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 537; E-Value: 0
Query Start/End: Original strand, 1 - 560
Target Start/End: Original strand, 39954548 - 39955108
Alignment:
| Q |
1 |
aagtgaactt-ttgatgttatgttctccaaaaataagcatggtcacggagatgaaacaaatgtaaaattcaaacagattatattctcacaaaattaaaag |
99 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39954548 |
aagtgaacttcttgatgttatgttctccaaaaataagcatggtcacggagatgaaacaaatgtaaaattcaaacagattatattctcacaaaattaaaag |
39954647 |
T |
|
| Q |
100 |
taaaagcaaatgtgctaggttcaaagtaatttcagcaaagacaaaattcattcattcatcgttaagaattaagatacaagtccaaatactagaaccacag |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39954648 |
taaaagcaaatgtgctaggttcaaagtaatttcagcaaagacaaaattcattcattcatcgttaagaattaagatacaagtccaaatactagaaccacag |
39954747 |
T |
|
| Q |
200 |
aactaagcattcaaccagatctaagactactaaatttatattaaccagatttagaactaaatcgaccagaacaaactaaaccctaaatttaaccaccgaa |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39954748 |
gactaagcattcaaccagatctaagactactaaatttatattaaccagatttagaactaaatcgaccagaacaaactaaaccctaaatttaaccaccgaa |
39954847 |
T |
|
| Q |
300 |
accgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaacagcatcacga |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39954848 |
accgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaacagcatcacga |
39954947 |
T |
|
| Q |
400 |
atcacattctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaagacgacgaatcg |
499 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39954948 |
atcacattctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctgattctcttcacaccaccacgccttgcaagacgacgaatcg |
39955047 |
T |
|
| Q |
500 |
caggcttggttatgccttggatgttatcgcgaagaacctttctgtgcctctctgctcctcc |
560 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
39955048 |
caggcttggttatgccttggatgttgtcgcgaagaacctttctgtgcctctttgctcctcc |
39955108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 290 - 395
Target Start/End: Complemental strand, 10575576 - 10575471
Alignment:
| Q |
290 |
aaccaccgaaaccgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaac |
389 |
Q |
| |
|
||||||||||||| ||||| || ||||| || ||||| || || || ||||||||||| || || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
10575576 |
aaccaccgaaaccatagagggttcttccttgtctcttaagcgcgtaaacaacatccatagcagtcacagttttcctcctcgcatgctcagtgtaagtaac |
10575477 |
T |
|
| Q |
390 |
agcatc |
395 |
Q |
| |
|
|||||| |
|
|
| T |
10575476 |
agcatc |
10575471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 409
Target Start/End: Complemental strand, 354547 - 354475
Alignment:
| Q |
337 |
acaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaacagcatcacgaatcacattct |
409 |
Q |
| |
|
||||||||||| || || | ||| |||||||| |||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
354547 |
acaacatccatagcagtcagagtcttcctccttgcatgctcagtgtaagtaacagcatcacaaatctcattct |
354475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 123; Significance: 6e-63; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 289 - 539
Target Start/End: Complemental strand, 53328904 - 53328654
Alignment:
| Q |
289 |
taaccaccgaaaccgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaa |
388 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||||| || |||||||| || | | ||||||||| ||||| || | |
|
|
| T |
53328904 |
taacccccgaaaccgtaaagagtccttccctgcctcttgagagcgtaaacaacatccattgcagtaacagtcttacggcgagcatgctctgtgtatgtga |
53328805 |
T |
|
| Q |
389 |
cagcatcacgaatcacattctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaag |
488 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||| | || || || | ||||||||||||||| ||||| || |
|
|
| T |
53328804 |
cagcatcacgaatcacattctcaagaaagatcttgagaacgccacgagtttcttcatagattaagccactgatacgcttcacaccaccacgtcttgcgag |
53328705 |
T |
|
| Q |
489 |
acgacgaatcgcaggcttggttatgccttggatgttatcgcgaagaacctt |
539 |
Q |
| |
|
|||||||||||||||||| || || || |||||||||||||| |||||||| |
|
|
| T |
53328704 |
acgacgaatcgcaggctttgtgattccctggatgttatcgcgcagaacctt |
53328654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 539
Target Start/End: Complemental strand, 22898719 - 22898493
Alignment:
| Q |
313 |
cttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaacagcatcacgaatcacattctcaa |
412 |
Q |
| |
|
|||||||| |||||||| ||||| || |||||||| || ||||| || ||||| ||||| |||||||||||||| |||||||| | |||||||||||| | |
|
|
| T |
22898719 |
cttccctgtctcttgagggcataaaccacatccatagcagtaaccgtcttccttctagcgtgctcagtgtaagtcacagcatctctaatcacattctcca |
22898620 |
T |
|
| Q |
413 |
gaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaagacgacgaatcgcaggcttggttat |
512 |
Q |
| |
|
||| ||||| | || || || ||||| || || || | ||| || || | |||||| || || | | ||||||||||||||||| ||||| ||||| |
|
|
| T |
22898619 |
aaaatatcttcaacacgccacgtgtctcctcataaatcaaaccactgatacgcttcactcctcctctacgagcaagacgacgaatcgctggctttgttat |
22898520 |
T |
|
| Q |
513 |
gccttggatgttatcgcgaagaacctt |
539 |
Q |
| |
|
|| |||||||| || ||||| ||||| |
|
|
| T |
22898519 |
tccctggatgttgtcacgaagcacctt |
22898493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 539
Target Start/End: Complemental strand, 22950387 - 22950161
Alignment:
| Q |
313 |
cttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaacagcatcacgaatcacattctcaa |
412 |
Q |
| |
|
|||||||| |||||||| ||||| || |||||||| || ||||| || ||||| ||||| |||||||||||||| |||||||| | |||||||||||| | |
|
|
| T |
22950387 |
cttccctgtctcttgagggcataaaccacatccatagcagtaaccgtcttccttctagcgtgctcagtgtaagtcacagcatctctaatcacattctcca |
22950288 |
T |
|
| Q |
413 |
gaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaagacgacgaatcgcaggcttggttat |
512 |
Q |
| |
|
||| ||||| | || || || ||||| || || || | ||| || || | |||||| || || | | ||||||||||||||||| ||||| ||||| |
|
|
| T |
22950287 |
aaaatatcttcaacacgccacgtgtctcctcataaatcaaaccactgatacgcttcactcctcctctacgagcaagacgacgaatcgctggctttgttat |
22950188 |
T |
|
| Q |
513 |
gccttggatgttatcgcgaagaacctt |
539 |
Q |
| |
|
|| |||||||| || ||||| ||||| |
|
|
| T |
22950187 |
tccctggatgttgtcacgaagcacctt |
22950161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 289 - 536
Target Start/End: Original strand, 26358540 - 26358787
Alignment:
| Q |
289 |
taaccaccgaaaccgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaa |
388 |
Q |
| |
|
||||| || ||||| || || |||||||| ||||||||||| ||||| ||||||||||| || ||||| ||||| | | |||||| ||||||||||| | |
|
|
| T |
26358540 |
taacccccaaaaccataaagggtccttccttgcctcttgagcgcataaacaacatccatagcagtaactgttttgcgacgagcatgttcagtgtaagtga |
26358639 |
T |
|
| Q |
389 |
cagcatcacgaatcacattctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaag |
488 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||| ||||| ||||| || || | || |||||||||||||||||||| |
|
|
| T |
26358640 |
cagcatcacgaataacattctcaagaaatatcttgagaacaccacgagtttcttcatagatcagaccactgatacgttttacaccaccacgccttgcaag |
26358739 |
T |
|
| Q |
489 |
acgacgaatcgcaggcttggttatgccttggatgttatcgcgaagaac |
536 |
Q |
| |
|
|||||||||||| || ||||| || || || |||||||| |||||||| |
|
|
| T |
26358740 |
acgacgaatcgcgggtttggtaattccctgaatgttatctcgaagaac |
26358787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 83; Significance: 5e-39; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 290 - 560
Target Start/End: Original strand, 24919879 - 24920149
Alignment:
| Q |
290 |
aaccaccgaaaccgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaac |
389 |
Q |
| |
|
|||| ||||| || ||||| || |||||||||||||| | |||||| || ||||||||||| || || || ||||||||||| ||||||||||| || || |
|
|
| T |
24919879 |
aacctccgaatccatagagggttcttccctgcctcttcaaagcatagacgacatccatggctgtcactgtcttcctcctagcgtgctcagtgtatgtcac |
24919978 |
T |
|
| Q |
390 |
agcatcacgaatcacattctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaaga |
489 |
Q |
| |
|
|||||||||||| |||||||| | |||||||| | ||||| | || ||||| ||||| | |||||| ||||||||||||||||| | ||||| | |
|
|
| T |
24919979 |
agcatcacgaatgacattctctaagaagatcttcaagacacctctggtttcttcatagatcaaaccgctgattctcttcacaccacctcttcttgccaat |
24920078 |
T |
|
| Q |
490 |
cgacgaatcgcaggcttggttatgccttggatgttatcgcgaagaacctttctgtgcctctctgctcctcc |
560 |
Q |
| |
|
|||||||| ||||||||||| || || ||||||||||| |||||||| || || ||||||| ||| ||||| |
|
|
| T |
24920079 |
cgacgaattgcaggcttggtgataccctggatgttatcacgaagaactttcctatgcctctttgcacctcc |
24920149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 290 - 560
Target Start/End: Complemental strand, 24982235 - 24981965
Alignment:
| Q |
290 |
aaccaccgaaaccgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaac |
389 |
Q |
| |
|
||||||||||||| ||||| || ||||| || ||||| | |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
24982235 |
aaccaccgaaaccatagagggttcttccttgtctcttcaaagcatagacaacatccatggcggtaacagtcttcctcctagcgtgctcagtgtatgtaac |
24982136 |
T |
|
| Q |
390 |
agcatcacgaatcacattctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaaga |
489 |
Q |
| |
|
|||||||| || |||||||| | |||||||| | ||||| | || ||||| || || | ||| || |||||||| |||||||| | ||||| | |
|
|
| T |
24982135 |
tgcatcacggatgacattctccaagaagatcttcaagacacctctggtttcttcatatatcaaaccactgattctcttaacaccacctcttcttgccaat |
24982036 |
T |
|
| Q |
490 |
cgacgaatcgcaggcttggttatgccttggatgttatcgcgaagaacctttctgtgcctctctgctcctcc |
560 |
Q |
| |
|
|||||||| ||||||||||| || || ||||||||||| |||||||| || || ||||||| ||| ||||| |
|
|
| T |
24982035 |
cgacgaatagcaggcttggtgataccctggatgttatcacgaagaactttcctatgcctctttgcacctcc |
24981965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 304 - 560
Target Start/End: Original strand, 24923467 - 24923723
Alignment:
| Q |
304 |
tagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaacagcatcacgaatca |
403 |
Q |
| |
|
||||| || |||||||| ||||| | |||||| |||||||||||||| || || || |||||||| || ||||||||||| || |||||||||||||| | |
|
|
| T |
24923467 |
tagagggttcttccctgtctcttcaaagcatagacaacatccatggctgtcactgtcttcctccttgcgtgctcagtgtatgtcacagcatcacgaatga |
24923566 |
T |
|
| Q |
404 |
cattctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaagacgacgaatcgcagg |
503 |
Q |
| |
|
||||||| | |||||||| | ||||| | || ||||| ||||| | ||| || |||||||| |||||||| | ||||| | |||||||| ||||| |
|
|
| T |
24923567 |
cattctccaagaagatcttcaagacacctctggtttcttcatagatcaaaccactgattctcttaacaccacctcttcttgccaatcgacgaatagcagg |
24923666 |
T |
|
| Q |
504 |
cttggttatgccttggatgttatcgcgaagaacctttctgtgcctctctgctcctcc |
560 |
Q |
| |
|
|||||| || || ||||||||||| |||||||||||||| ||||||| ||| ||||| |
|
|
| T |
24923667 |
cttggtgataccctggatgttatcacgaagaacctttctatgcctctttgcacctcc |
24923723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 298 - 560
Target Start/End: Complemental strand, 25085219 - 25084957
Alignment:
| Q |
298 |
aaaccgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaacagcatcac |
397 |
Q |
| |
|
||||| ||||| || |||||||| ||||| | |||||| |||||||||||||| || ||||| |||||||| || ||||||||||| ||||| ||||||| |
|
|
| T |
25085219 |
aaaccatagagggttcttccctgtctcttcaaagcatagacaacatccatggctgtcacagtcttcctccttgcgtgctcagtgtatgtaactgcatcac |
25085120 |
T |
|
| Q |
398 |
gaatcacattctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaagacgacgaat |
497 |
Q |
| |
|
| ||||||||||| | |||||||| | ||||| | || ||||| || || | ||| || ||||||||||||||||| | || || | | |||||| |
|
|
| T |
25085119 |
ggatcacattctccaagaagatcttcaagacacctctggtttcttcatatatcaaaccactgattctcttcacaccacctcttctcgccaatctacgaat |
25085020 |
T |
|
| Q |
498 |
cgcaggcttggttatgccttggatgttatcgcgaagaacctttctgtgcctctctgctcctcc |
560 |
Q |
| |
|
||||||||||| || || ||||||||||| |||||||||||||| ||||||| ||| ||||| |
|
|
| T |
25085019 |
ggcaggcttggtgataccctggatgttatcacgaagaacctttctatgcctctttgcacctcc |
25084957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 290 - 548
Target Start/End: Original strand, 31825550 - 31825808
Alignment:
| Q |
290 |
aaccaccgaaaccgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaac |
389 |
Q |
| |
|
|||| ||||| || ||||| || |||||||||||||| | |||||| ||||||||||| |||||||| || ||||||||||| ||||||||||| || || |
|
|
| T |
31825550 |
aacctccgaatccatagagggttcttccctgcctcttcaaagcatagacaacatccatcgcggtaactgtcttcctcctagcgtgctcagtgtatgtgac |
31825649 |
T |
|
| Q |
390 |
agcatcacgaatcacattctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaaga |
489 |
Q |
| |
|
|||||||| || |||||||| | |||||||| | ||||| | ||| ||||| ||||| | ||| || || |||||||||||||| | || || | |
|
|
| T |
31825650 |
cgcatcacggatgacattctccaagaagatcttcaagacacctctagtttcttcatagatcaaaccactgatcctcttcacaccacctcttctcgccaat |
31825749 |
T |
|
| Q |
490 |
cgacgaatcgcaggcttggttatgccttggatgttatcgcgaagaacctttctgtgcct |
548 |
Q |
| |
|
|||||||| |||||||| || || || |||||||| ||||| ||||| ||||||||||| |
|
|
| T |
31825750 |
cgacgaatggcaggcttagtgataccctggatgttgtcgcggagaacttttctgtgcct |
31825808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 560
Target Start/End: Original strand, 24497260 - 24497522
Alignment:
| Q |
298 |
aaaccgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaacagcatcac |
397 |
Q |
| |
|
||||| ||||| || ||||| || ||||| | |||||| |||||||||||||| || ||||| |||||||| || ||||||||||| ||||| ||||||| |
|
|
| T |
24497260 |
aaaccatagagggttcttccttgtctcttcaaagcatagacaacatccatggctgtcacagtcttcctccttgcgtgctcagtgtatgtaactgcatcac |
24497359 |
T |
|
| Q |
398 |
gaatcacattctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaagacgacgaat |
497 |
Q |
| |
|
| |||||||| || | |||||||| | ||||| | || ||||| ||||| | || || |||||||| |||||||| | ||||| | |||||||| |
|
|
| T |
24497360 |
ggatcacattttccaagaagatcttcaagacacctctggtttcttcatagatcaatccactgattctcttaacaccacctcttcttgccaatcgacgaat |
24497459 |
T |
|
| Q |
498 |
cgcaggcttggttatgccttggatgttatcgcgaagaacctttctgtgcctctctgctcctcc |
560 |
Q |
| |
|
||||||||||| || || |||||||| || ||||||||||| || ||||||| ||| ||||| |
|
|
| T |
24497460 |
agcaggcttggtgataccctggatgttgtcacgaagaaccttcctatgcctctttgcacctcc |
24497522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 313 - 560
Target Start/End: Original strand, 21584613 - 21584860
Alignment:
| Q |
313 |
cttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaacagcatcacgaatcacattct-ca |
411 |
Q |
| |
|
||||| |||||||| | |||||| ||||||||||| || || ||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||| || |
|
|
| T |
21584613 |
cttccttgcctcttcaaagcataaacaacatccatagcagtcacagtcttcctccttgcatgctcagtgtacgtaaccgcatcacgaatcacattctcca |
21584712 |
T |
|
| Q |
412 |
agaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaagacgacgaatcgcaggcttggtta |
511 |
Q |
| |
|
||||| ||||| ||||| || | || || || || || | ||| || |||||||| |||||||| | || || | ||||||||||| |||||||| | |
|
|
| T |
21584713 |
agaaa-atcttaagaactcctcttgtttcctcataaatcaaaccactgattctcttaacaccacctcttctcgccaatcgacgaatcgctggcttggtga |
21584811 |
T |
|
| Q |
512 |
tgccttggatgttatcgcgaagaacctttctgtgcctctctgctcctcc |
560 |
Q |
| |
|
| || || |||||||| |||||||| || ||||| |||| ||| ||||| |
|
|
| T |
21584812 |
ttccctgaatgttatcacgaagaactttcctgtgtctctttgcacctcc |
21584860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 307 - 539
Target Start/End: Complemental strand, 41027744 - 41027512
Alignment:
| Q |
307 |
agagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaacagcatcacgaatcacat |
406 |
Q |
| |
|
||||||||||| || ||||| | ||||| ||||||||||| || |||||||| || |||||||| ||||| ||||||||||||||||||||||| |||| |
|
|
| T |
41027744 |
agagtccttccttgtctcttcaatgcataaacaacatccatagcagtaacagtctttctcctagcgtgctctgtgtaagtaacagcatcacgaataacat |
41027645 |
T |
|
| Q |
407 |
tctcaagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacaccaccacgccttgcaagacgacgaatcgcaggctt |
506 |
Q |
| |
|
|||| | ||||||||| | || || || |||||||||||||| | |||||| || | |||||| || || | | ||| | |||||||||||||||||| |
|
|
| T |
41027644 |
tctccaaaaagatcttcaacacgccacgtgtctcttcgtagatcaaaccgcttatacgcttcactcctcctctacgtgccaaacgacgaatcgcaggctt |
41027545 |
T |
|
| Q |
507 |
ggttatgccttggatgttatcgcgaagaacctt |
539 |
Q |
| |
|
|| || ||||| |||||||| ||||| ||||| |
|
|
| T |
41027544 |
cgtaattccttgaatgttatcacgaagcacctt |
41027512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 473
Target Start/End: Original strand, 14261025 - 14261208
Alignment:
| Q |
290 |
aaccaccgaaaccgtagagagtccttccctgcctcttgagagcatacacaacatccatggcggtaacagttttcctcctagcatgctcagtgtaagtaac |
389 |
Q |
| |
|
|||| |||||||| || | ||||||||| || ||||| | ||||| ||||||||||| || ||||| || |||||||| ||||| ||||| || ||||| |
|
|
| T |
14261025 |
aacctccgaaaccatacaaagtccttccttgtctcttcaacgcataaacaacatccatagcagtaaccgtcttcctcctcgcatgttcagtatacgtaac |
14261124 |
T |
|
| Q |
390 |
agcatcacgaatcacattct-caagaaagatcttgagaacaccgcgagtctcttcgtagatgagaccgctaattctcttcacacc |
473 |
Q |
| |
|
|||||| | |||||||||| ||||||| ||||| | ||||||||||| ||||| || || | ||||| |||||||||||||| |
|
|
| T |
14261125 |
agcatctcttatcacattctccaagaaa-atcttcaacacaccgcgagtttcttcataaatcaacccgctgattctcttcacacc |
14261208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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