View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21493_high_26 (Length: 238)
Name: NF21493_high_26
Description: NF21493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21493_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 6504765 - 6504559
Alignment:
| Q |
1 |
aaacacaaaaacatcatagtacattgtccaaacaaaacatcatagtacatttattagattccaatggaacaagaagaagacatatcaccaatgtcaccat |
100 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| | |
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| T |
6504765 |
aaacacaaaaacatcatagtacattgtccaaaca-----tcatagtacatt-attagattccaatggaacaagaagaagacatatcacca---------t |
6504681 |
T |
|
| Q |
101 |
tttggctcccaaaaaccaccacaaaccaccaccgtctccgccgcacatactcactcctcctcacaacaaccaccaccctcttcctcatcctcataacaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6504680 |
tttggctcccaaaaaccaccacaaaccaccaccgtctccgccgcacatactcactcctcctcacaacaaccaccaccctcttcctcatcctcataacaat |
6504581 |
T |
|
| Q |
201 |
cctaatcttcatactcattgtg |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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| T |
6504580 |
cctaatcttcatactcattgtg |
6504559 |
T |
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