View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21493_low_24 (Length: 325)
Name: NF21493_low_24
Description: NF21493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21493_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 33791153 - 33791470
Alignment:
| Q |
1 |
gtgatggattagtatcaactgttaatgatgtacatcttccagggccagaatcctcaatttctcaaacattacaagcttttaaatccaaaggtatgacatt |
100 |
Q |
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| T |
33791153 |
gtgatggattagtatcaactgttaatgatgtacatcttccagggccagaatcctcaatttctcaaacattacaagcttttaaatccaaaggtatgacatt |
33791252 |
T |
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| Q |
101 |
ggaagaaatggttacacttttaggagcacacactgttggatttgctcattgtagtttcattggaaaaagacttggtagtaatgatagttcaatggaccct |
200 |
Q |
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| T |
33791253 |
ggaagaaatggttacacttttaggagcacacactgttggatttgctcattgtagtttcattggaaaaagacttggtagtaatgatagttcaatggaccct |
33791352 |
T |
|
| Q |
201 |
aatttaaggaaaacgttggttcaatggtgtggtgttgaaggtaaggatccattggtgtttttggatcaaaacacttcttttgtgtttgatcatcaatttt |
300 |
Q |
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|||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
33791353 |
aatttaagaaaaaggttggttcaatggtgtggtgttgaaggtaaggatccattagtgtttttggatcaaaacacttcttttgtttttgatcatcaatttt |
33791452 |
T |
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| Q |
301 |
ataatcagattttcttgg |
318 |
Q |
| |
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||||||||||||| |||| |
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| T |
33791453 |
ataatcagattttgttgg |
33791470 |
T |
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