View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21493_low_4 (Length: 546)

Name: NF21493_low_4
Description: NF21493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21493_low_4
NF21493_low_4
[»] chr6 (24 HSPs)
chr6 (17-546)||(31831568-31832096)
chr6 (304-462)||(34501-34658)
chr6 (308-498)||(5095927-5096116)
chr6 (302-546)||(9593704-9593943)
chr6 (331-501)||(8364646-8364815)
chr6 (398-463)||(10617323-10617388)
chr6 (408-537)||(579472-579601)
chr6 (408-501)||(7080430-7080523)
chr6 (370-546)||(24665855-24666031)
chr6 (305-501)||(12890665-12890860)
chr6 (398-453)||(38901-38956)
chr6 (410-517)||(4948405-4948512)
chr6 (410-517)||(4955376-4955483)
chr6 (384-438)||(43127-43181)
chr6 (194-232)||(30875708-30875746)
chr6 (397-462)||(1747729-1747794)
chr6 (386-463)||(6055848-6055925)
chr6 (396-453)||(31818669-31818726)
chr6 (403-546)||(32913355-32913499)
chr6 (401-501)||(35199714-35199814)
chr6 (399-438)||(1681611-1681650)
chr6 (397-447)||(33997632-33997682)
chr6 (370-447)||(14389223-14389299)
chr6 (304-348)||(4245868-4245912)
[»] chr4 (66 HSPs)
chr4 (315-546)||(34233031-34233261)
chr4 (384-501)||(28351649-28351766)
chr4 (304-433)||(25574982-25575110)
chr4 (304-501)||(35690361-35690557)
chr4 (313-501)||(26037510-26037697)
chr4 (304-546)||(13805261-13805502)
chr4 (313-447)||(26024855-26024988)
chr4 (305-501)||(45204837-45205030)
chr4 (305-452)||(56439567-56439714)
chr4 (397-452)||(934519-934574)
chr4 (398-453)||(10209174-10209229)
chr4 (397-516)||(47147448-47147567)
chr4 (408-501)||(25967360-25967453)
chr4 (304-453)||(37488229-37488377)
chr4 (396-453)||(50680878-50680935)
chr4 (398-518)||(21945727-21945847)
chr4 (373-437)||(26024984-26025047)
chr4 (398-453)||(31961355-31961410)
chr4 (370-501)||(51421820-51421950)
chr4 (400-474)||(20999117-20999191)
chr4 (397-443)||(37042752-37042798)
chr4 (394-463)||(55809075-55809144)
chr4 (331-463)||(53518347-53518477)
chr4 (304-435)||(5306452-5306582)
chr4 (398-453)||(31897517-31897572)
chr4 (401-448)||(42293357-42293404)
chr4 (397-452)||(42639108-42639163)
chr4 (398-453)||(46372162-46372217)
chr4 (396-438)||(7544610-7544652)
chr4 (415-453)||(8599047-8599085)
chr4 (397-491)||(18966705-18966799)
chr4 (399-453)||(26356757-26356811)
chr4 (392-438)||(31043225-31043271)
chr4 (397-451)||(40018277-40018331)
chr4 (392-453)||(21107130-21107191)
chr4 (398-451)||(21214675-21214728)
chr4 (408-453)||(33225932-33225977)
chr4 (392-501)||(39708523-39708632)
chr4 (397-462)||(45569097-45569162)
chr4 (393-462)||(49987537-49987606)
chr4 (370-543)||(50662436-50662608)
chr4 (397-450)||(54470348-54470401)
chr4 (397-445)||(20047581-20047629)
chr4 (397-501)||(33710014-33710118)
chr4 (410-462)||(40268364-40268415)
chr4 (397-453)||(49738638-49738694)
chr4 (304-462)||(53540419-53540576)
chr4 (401-444)||(6843762-6843805)
chr4 (397-447)||(21879241-21879292)
chr4 (400-451)||(30853483-30853534)
chr4 (397-452)||(31403122-31403177)
chr4 (370-452)||(2557734-2557815)
chr4 (401-499)||(7682002-7682100)
chr4 (480-546)||(28497534-28497600)
chr4 (401-447)||(38903810-38903856)
chr4 (313-431)||(55388216-55388333)
chr4 (471-501)||(56439749-56439779)
chr4 (412-501)||(6478786-6478875)
chr4 (397-438)||(29182605-29182646)
chr4 (397-453)||(2589210-2589266)
chr4 (398-450)||(20105607-20105659)
chr4 (305-385)||(29399009-29399089)
chr4 (398-438)||(30621290-30621330)
chr4 (408-452)||(34809161-34809205)
chr4 (397-429)||(44047459-44047491)
chr4 (397-433)||(44384988-44385024)
[»] chr8 (48 HSPs)
chr8 (300-546)||(29520695-29520939)
chr8 (308-546)||(35914601-35914838)
chr8 (308-491)||(2216388-2216568)
chr8 (397-501)||(38178348-38178452)
chr8 (396-462)||(35643693-35643759)
chr8 (397-462)||(4011212-4011277)
chr8 (397-454)||(39967587-39967644)
chr8 (308-501)||(45419325-45419517)
chr8 (397-463)||(23023353-23023419)
chr8 (397-462)||(79156-79221)
chr8 (396-501)||(5908736-5908841)
chr8 (397-546)||(10079995-10080144)
chr8 (400-453)||(16351516-16351569)
chr8 (394-495)||(30559789-30559890)
chr8 (398-543)||(32931009-32931154)
chr8 (313-509)||(35362655-35362850)
chr8 (304-435)||(490491-490621)
chr8 (304-463)||(28169520-28169677)
chr8 (396-491)||(30783129-30783224)
chr8 (397-462)||(16994532-16994597)
chr8 (397-453)||(39388920-39388977)
chr8 (341-546)||(43904698-43904902)
chr8 (398-499)||(24558579-24558676)
chr8 (483-546)||(6483302-6483365)
chr8 (370-453)||(9904944-9905026)
chr8 (396-451)||(30198353-30198408)
chr8 (398-516)||(7531733-7531851)
chr8 (331-453)||(16035750-16035871)
chr8 (397-451)||(24399877-24399931)
chr8 (396-462)||(38391980-38392046)
chr8 (397-463)||(43733335-43733401)
chr8 (392-462)||(45512578-45512648)
chr8 (408-453)||(10108951-10108996)
chr8 (418-454)||(5127379-5127415)
chr8 (187-223)||(8559410-8559446)
chr8 (397-453)||(24739936-24739992)
chr8 (398-453)||(17491743-17491798)
chr8 (415-462)||(45331674-45331721)
chr8 (396-438)||(16705900-16705942)
chr8 (419-501)||(29700366-29700448)
chr8 (374-451)||(7615657-7615733)
chr8 (408-453)||(9070126-9070171)
chr8 (398-451)||(16971843-16971896)
chr8 (392-453)||(28269762-28269822)
chr8 (441-546)||(41971910-41972015)
chr8 (393-438)||(45041399-45041444)
chr8 (397-445)||(3079692-3079740)
chr8 (401-453)||(11733885-11733937)
[»] chr3 (46 HSPs)
chr3 (308-501)||(45289091-45289283)
chr3 (392-546)||(39600764-39600918)
chr3 (308-446)||(49042081-49042219)
chr3 (304-546)||(48508280-48508521)
chr3 (398-546)||(33755431-33755579)
chr3 (399-453)||(36820067-36820121)
chr3 (304-501)||(42510012-42510208)
chr3 (307-503)||(54128466-54128662)
chr3 (397-452)||(46431767-46431822)
chr3 (397-546)||(37598258-37598406)
chr3 (397-501)||(19162675-19162779)
chr3 (398-514)||(23534659-23534775)
chr3 (397-501)||(44443292-44443396)
chr3 (402-453)||(2340810-2340861)
chr3 (308-434)||(36304123-36304248)
chr3 (397-451)||(41452828-41452882)
chr3 (400-453)||(11581582-11581635)
chr3 (397-462)||(21200677-21200742)
chr3 (368-453)||(40116528-40116612)
chr3 (392-501)||(50960720-50960829)
chr3 (397-453)||(40982034-40982090)
chr3 (397-453)||(43308700-43308756)
chr3 (306-453)||(19676079-19676225)
chr3 (398-453)||(26990351-26990406)
chr3 (397-436)||(29475841-29475880)
chr3 (398-453)||(37351545-37351600)
chr3 (370-501)||(38430938-38431068)
chr3 (305-431)||(29601052-29601177)
chr3 (396-546)||(39235183-39235333)
chr3 (410-459)||(7278591-7278640)
chr3 (398-463)||(27893217-27893282)
chr3 (410-462)||(31337657-31337708)
chr3 (400-448)||(33307257-33307305)
chr3 (433-501)||(48734259-48734327)
chr3 (305-436)||(49503565-49503695)
chr3 (418-500)||(31261051-31261132)
chr3 (398-452)||(32052607-32052661)
chr3 (396-438)||(49841769-49841811)
chr3 (419-501)||(54365085-54365167)
chr3 (304-361)||(40273201-40273258)
chr3 (392-453)||(45486935-45486996)
chr3 (304-361)||(53519809-53519866)
chr3 (415-543)||(2968259-2968387)
chr3 (410-450)||(21427683-21427723)
chr3 (397-453)||(45493780-45493836)
chr3 (384-448)||(48657403-48657467)
[»] chr1 (63 HSPs)
chr1 (306-546)||(32404525-32404763)
chr1 (313-546)||(40416416-40416648)
chr1 (397-546)||(42501153-42501302)
chr1 (313-501)||(52561594-52561781)
chr1 (305-453)||(41560367-41560514)
chr1 (394-501)||(9599479-9599586)
chr1 (428-546)||(2544644-2544761)
chr1 (307-501)||(8796299-8796492)
chr1 (396-497)||(29577229-29577330)
chr1 (393-489)||(26299187-26299283)
chr1 (398-453)||(8203223-8203278)
chr1 (397-464)||(8342969-8343036)
chr1 (398-453)||(19969301-19969356)
chr1 (397-544)||(46388423-46388570)
chr1 (397-544)||(46394867-46395014)
chr1 (400-501)||(3818947-3819048)
chr1 (397-462)||(30834065-30834130)
chr1 (418-495)||(36339912-36339989)
chr1 (397-546)||(38868927-38869076)
chr1 (397-546)||(43423764-43423913)
chr1 (313-438)||(52532621-52532745)
chr1 (397-501)||(6025695-6025799)
chr1 (397-451)||(12231505-12231559)
chr1 (316-453)||(29128921-29129058)
chr1 (409-546)||(48431506-48431643)
chr1 (304-416)||(34444531-34444642)
chr1 (396-447)||(990545-990596)
chr1 (398-461)||(8676954-8677017)
chr1 (398-453)||(28528493-28528548)
chr1 (306-356)||(14224318-14224368)
chr1 (304-546)||(25979227-25979468)
chr1 (397-462)||(853873-853938)
chr1 (401-458)||(6299485-6299542)
chr1 (397-462)||(33560946-33561011)
chr1 (397-501)||(478768-478872)
chr1 (418-502)||(9509407-9509491)
chr1 (397-437)||(12135861-12135901)
chr1 (401-453)||(26016575-26016627)
chr1 (305-501)||(38807668-38807863)
chr1 (313-437)||(39140669-39140792)
chr1 (398-516)||(43898304-43898425)
chr1 (398-453)||(7083028-7083083)
chr1 (384-463)||(8628158-8628237)
chr1 (396-451)||(39515955-39516010)
chr1 (398-453)||(50771645-50771700)
chr1 (370-448)||(27520269-27520346)
chr1 (481-546)||(27704055-27704118)
chr1 (331-453)||(28511824-28511945)
chr1 (397-451)||(30445251-30445305)
chr1 (304-425)||(5338879-5338999)
chr1 (396-453)||(7762524-7762581)
chr1 (396-453)||(11941667-11941724)
chr1 (397-438)||(15577571-15577612)
chr1 (313-501)||(37462881-37463068)
chr1 (304-501)||(39318219-39318414)
chr1 (397-462)||(44008708-44008773)
chr1 (408-436)||(10569170-10569198)
chr1 (398-434)||(10584986-10585022)
chr1 (409-453)||(17815617-17815661)
chr1 (305-437)||(37311752-37311883)
chr1 (304-360)||(37430416-37430472)
chr1 (383-451)||(43367704-43367772)
chr1 (383-463)||(52442602-52442682)
[»] chr7 (51 HSPs)
chr7 (313-546)||(28627938-28628170)
chr7 (304-546)||(38135209-38135449)
chr7 (354-501)||(36136854-36137000)
chr7 (370-501)||(1569106-1569236)
chr7 (304-434)||(27893559-27893688)
chr7 (370-497)||(28562427-28562554)
chr7 (396-463)||(45601604-45601671)
chr7 (308-463)||(40979928-40980082)
chr7 (304-453)||(9210700-9210848)
chr7 (397-445)||(24549776-24549824)
chr7 (397-453)||(30144913-30144969)
chr7 (396-452)||(30664707-30664763)
chr7 (409-489)||(30814771-30814851)
chr7 (370-453)||(21517442-21517524)
chr7 (370-453)||(37976373-37976455)
chr7 (397-463)||(12966144-12966210)
chr7 (397-451)||(28858185-28858239)
chr7 (305-546)||(2885719-2885959)
chr7 (401-450)||(29653638-29653687)
chr7 (370-451)||(36239858-36239938)
chr7 (305-546)||(43281719-43281959)
chr7 (370-453)||(3457499-3457581)
chr7 (397-448)||(41461242-41461293)
chr7 (370-501)||(47848764-47848893)
chr7 (408-462)||(22174129-22174183)
chr7 (400-462)||(40830331-40830393)
chr7 (371-453)||(43281969-43282050)
chr7 (440-501)||(27893682-27893743)
chr7 (305-448)||(42187584-42187726)
chr7 (396-453)||(43282547-43282604)
chr7 (408-453)||(44401224-44401269)
chr7 (198-246)||(25268321-25268369)
chr7 (396-452)||(32368424-32368480)
chr7 (375-454)||(38103680-38103758)
chr7 (397-491)||(46973698-46973786)
chr7 (307-501)||(1011137-1011329)
chr7 (398-459)||(5336052-5336111)
chr7 (408-438)||(9191928-9191958)
chr7 (408-438)||(40139047-40139077)
chr7 (401-451)||(42177110-42177160)
chr7 (304-501)||(44855170-44855364)
chr7 (304-546)||(48202699-48202939)
chr7 (198-231)||(3665705-3665738)
chr7 (397-434)||(28542032-28542069)
chr7 (397-438)||(41483640-41483681)
chr7 (303-360)||(48735896-48735953)
chr7 (332-444)||(14057625-14057736)
chr7 (332-444)||(14367653-14367764)
chr7 (409-453)||(14593898-14593942)
chr7 (409-453)||(16013421-16013465)
chr7 (307-423)||(27648948-27649063)
[»] chr5 (43 HSPs)
chr5 (306-546)||(7359259-7359496)
chr5 (304-515)||(14667847-14668057)
chr5 (398-546)||(2712989-2713137)
chr5 (397-501)||(9917538-9917642)
chr5 (400-501)||(12576951-12577052)
chr5 (398-546)||(21952402-21952548)
chr5 (399-462)||(6889122-6889185)
chr5 (396-491)||(7678578-7678673)
chr5 (419-546)||(15489602-15489729)
chr5 (401-463)||(27998569-27998631)
chr5 (392-453)||(28020-28081)
chr5 (370-462)||(9235178-9235267)
chr5 (397-462)||(14749436-14749501)
chr5 (397-462)||(18698923-18698988)
chr5 (396-453)||(30588585-30588642)
chr5 (396-501)||(43475330-43475434)
chr5 (332-516)||(6788142-6788325)
chr5 (408-452)||(29922423-29922467)
chr5 (397-453)||(38684618-38684674)
chr5 (397-453)||(42199531-42199587)
chr5 (398-501)||(1525734-1525837)
chr5 (398-453)||(10082834-10082889)
chr5 (398-453)||(33667573-33667628)
chr5 (315-546)||(38685012-38685242)
chr5 (398-453)||(42199424-42199479)
chr5 (397-463)||(4460336-4460401)
chr5 (397-438)||(28186863-28186904)
chr5 (397-453)||(2066135-2066191)
chr5 (394-498)||(15168864-15168968)
chr5 (398-546)||(31636009-31636157)
chr5 (397-448)||(11675672-11675723)
chr5 (398-453)||(15369886-15369941)
chr5 (304-435)||(20367049-20367179)
chr5 (304-463)||(28976855-28977013)
chr5 (408-462)||(6859510-6859564)
chr5 (471-501)||(13423085-13423115)
chr5 (410-444)||(24391089-24391123)
chr5 (384-434)||(39322141-39322191)
chr5 (400-453)||(3775256-3775309)
chr5 (397-454)||(5303581-5303638)
chr5 (401-434)||(28005692-28005725)
chr5 (304-361)||(30213804-30213861)
chr5 (399-460)||(32759707-32759768)
[»] chr2 (51 HSPs)
chr2 (313-501)||(33504313-33504501)
chr2 (304-499)||(35755241-35755439)
chr2 (397-501)||(19235072-19235176)
chr2 (305-443)||(9496014-9496151)
chr2 (396-501)||(18959001-18959106)
chr2 (396-501)||(38435042-38435147)
chr2 (370-464)||(33287548-33287641)
chr2 (398-543)||(43752036-43752181)
chr2 (397-501)||(37481705-37481809)
chr2 (302-453)||(44437715-44437865)
chr2 (400-462)||(7431980-7432042)
chr2 (400-453)||(26784431-26784484)
chr2 (305-449)||(9556366-9556509)
chr2 (392-546)||(12141589-12141743)
chr2 (473-546)||(3481186-3481259)
chr2 (398-463)||(26670896-26670961)
chr2 (396-501)||(37470220-37470325)
chr2 (397-446)||(43832243-43832292)
chr2 (400-444)||(1626342-1626386)
chr2 (401-453)||(12026097-12026149)
chr2 (305-453)||(12489799-12489946)
chr2 (370-453)||(19336955-19337038)
chr2 (350-438)||(42149702-42149789)
chr2 (397-460)||(19024309-19024372)
chr2 (398-453)||(42543373-42543428)
chr2 (304-463)||(43573126-43573283)
chr2 (304-438)||(8197537-8197670)
chr2 (304-438)||(8202297-8202430)
chr2 (397-451)||(18188892-18188946)
chr2 (304-453)||(12734838-12734986)
chr2 (304-453)||(12882041-12882189)
chr2 (408-452)||(6230363-6230407)
chr2 (397-445)||(11006853-11006901)
chr2 (398-446)||(23915782-23915830)
chr2 (397-453)||(42092655-42092711)
chr2 (398-453)||(5759084-5759139)
chr2 (408-499)||(29548736-29548827)
chr2 (399-438)||(45640615-45640654)
chr2 (308-362)||(17429278-17429332)
chr2 (400-434)||(31254445-31254479)
chr2 (398-436)||(33625287-33625325)
chr2 (400-438)||(38860331-38860369)
chr2 (397-462)||(19855591-19855656)
chr2 (403-452)||(36869997-36870046)
chr2 (304-501)||(38429974-38430169)
chr2 (409-438)||(44415783-44415812)
chr2 (392-452)||(4682260-4682320)
chr2 (396-452)||(21834693-21834749)
chr2 (392-448)||(37282234-37282290)
chr2 (398-462)||(37452315-37452379)
chr2 (400-448)||(41779201-41779249)
[»] scaffold0018 (1 HSPs)
scaffold0018 (398-453)||(178509-178564)
[»] scaffold0325 (1 HSPs)
scaffold0325 (402-452)||(11936-11986)
[»] scaffold0570 (1 HSPs)
scaffold0570 (392-463)||(1031-1102)
[»] scaffold0373 (1 HSPs)
scaffold0373 (401-444)||(2393-2436)
[»] scaffold0279 (1 HSPs)
scaffold0279 (397-450)||(17680-17733)
[»] scaffold0050 (1 HSPs)
scaffold0050 (418-447)||(45553-45582)
[»] scaffold0015 (1 HSPs)
scaffold0015 (401-462)||(66666-66727)
[»] scaffold0010 (1 HSPs)
scaffold0010 (313-450)||(160329-160465)
[»] scaffold0221 (1 HSPs)
scaffold0221 (304-348)||(19159-19203)
[»] scaffold0003 (1 HSPs)
scaffold0003 (408-452)||(346872-346916)


Alignment Details
Target: chr6 (Bit Score: 449; Significance: 0; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 17 - 546
Target Start/End: Original strand, 31831568 - 31832096
Alignment:
Q  17 aatgaacaatgtcactctacagaaaaacttacgtactacctagtcctttaatataagaccctcatgnnnnnnnttctggttcccccttttataagacacc 116  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||       |||||||||||||||||||||||||||    
T  31831568 aatgaacaatgtcactctacagaaaaacttacttactacctagtccttaaatataagaccctcgtgaaaaaaattctggttcccccttttataagacacc 31831667  T
Q  117 cttcaaattttcatttgcattgataatcctaattacggtacagtttttgagtttaatagagatatatagctgatgtaaaacagttttacaccgacatcca 216  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31831668 cttcaaattttcatttgcattgatactcctaattacagtacagtttttgagtttaatagagatatatagccgatgtaaaacagttttacaccgacatcca 31831767  T
Q  217 atgagaattcatgataatgccacataagcccatttgtatctgacaatgcacatgccccctctctcatagttttcatatagccgatagaacaacaaaaaca 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31831768 atgagaattcatgataatgccacataagcccatttgtatctgacaatgcatatgccccctctctcatagttttcatatagccgatagaacaacaaaaaca 31831867  T
Q  317 accaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctcta 416  Q
    ||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  31831868 acc-aaccttatctcactaagtagggtcgactgcatgaatcaaattcccctacaatgttctatcataaaaccatgtttggatccaactcagtaatctcta 31831966  T
Q  417 gatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatataatc 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31831967 gatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctgactatcctccatctgatctactctacttgctatataatc 31832066  T
Q  517 tccggaccttctctctacatgtccaaacca 546  Q
    ||||||||||||||||||||||||||||||    
T  31832067 tccggaccttctctctacatgtccaaacca 31832096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 304 - 462
Target Start/End: Original strand, 34501 - 34658
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| |||||||||  ||| || |||||||| ||||| |||  ||| |||||||| | | | |||||| ||||||||| | || |||  |||||||    
T  34501 aacaacaacaacaaccaagtcttatcccactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaacc-atatttcaatccaac 34599  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    ||| |||||| ||||||||||||||| |||||||| ||||||||||||||  |||||||    
T  34600 tcattaatctttagatctttcttaatggtttctcttatagtttttctaggtcttcctct 34658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 308 - 498
Target Start/End: Complemental strand, 5096116 - 5095927
Alignment:
Q  308 acaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcag 407  Q
    |||| |||||||||||||| || |||||||| || ||||||  ||  |||||||| | | | |||||| ||||||||| | || ||| |||||||||||     
T  5096116 acaacaacaaccaaaccttatcccactaagtgggatcggctacatagatcaaattacgccataatgttctatcataaacc-atattttgatccaactcat 5096018  T
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctac 498  Q
    ||| | ||| ||||||| ||| |||||||||  |||||||||||||  ||||||||  |||  |||||||||| || ||||||||||||||    
T  5096017 taaccactaaatctttcctaagagtttctcttctagtttttctaggtcttcctctacctcttctgatctaactctcttccatctgatctac 5095927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 302 - 546
Target Start/End: Original strand, 9593704 - 9593943
Alignment:
Q  302 agaacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatcca 401  Q
    |||| ||||| ||||||||| |||| |  ||||||||  |||| ||| |||| |||||||| || ||  ||||| ||||||||| | || || |||||||    
T  9593704 agaaaaacaacaacaaccaagccttatgccactaagtgtggtcagctatatggatcaaattaccata--atgttctatcataaacc-atattgggatcca 9593800  T
Q  402 actcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||||| |||||||||  |||||| ||||||||||||| ||| ||||||||||  ||||||||  |||  |||| | ||| ||||||||||||||||||||    
T  9593801 actcattaatctctaagtctttcctaatagtttctcttataatttttctaggtcttcctctacctct--tgatttgactctcctccatctgatctactct 9593898  T
Q  502 acttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
     ||| ||| |  |||| |    |||||||||||||| ||||||||    
T  9593899 tcttactacagcatctacatgtcttctctctacatgcccaaacca 9593943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 501
Target Start/End: Complemental strand, 8364815 - 8364646
Alignment:
Q  331 cactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaata 430  Q
    |||||||  |||||||||  ||| |||||||| | | | |||||| ||||||||| | ||||||   ||||||| | |||| |||| |||||||||||||    
T  8364815 cactaagcggggtcggctacatggatcaaattacgccataatgttctatcataaacc-atgtttcagtccaacttattaatttctaaatctttcttaata 8364717  T
Q  431 gtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    |||||||| ||||||||| ||||  ||| |||   |||  |||||| || |||||||||||||||||||||    
T  8364716 gtttctcttatagtttttttaggtcttcatcttcctctagtgatctgacaatcctccatctgatctactct 8364646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 10617323 - 10617388
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||||||||| ||||||||||||| |||||||| |||||||| |||||||||||||| |||| ||||    
T  10617323 tccaactcattaatctctagatccttcttaatggtttctcttatagtttttctaggttttcttcta 10617388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 537
Target Start/End: Complemental strand, 579601 - 579472
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgc 507  Q
    |||| |||| ||||||||||||||||||||| | |||||||  |||  || ||||   |||  |||||  |||||||||||||||||| ||||| ||| |    
T  579601 taatttctatatctttcttaatagtttctcttacagttttttgaggtctttctctgcctctagtgatcagactatcctccatctgatcaactctccttac 579502  T
Q  508 tatataatctccggaccttctctctacatg 537  Q
    |||||||||| |   |||||||||||||||    
T  579501 tatataatctacaagccttctctctacatg 579472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 501
Target Start/End: Complemental strand, 7080523 - 7080430
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    |||||| |||||||||||| ||||||||||| ||||||||| |||| ||||||||| |||| | ||| | |||   |||||||||||| |||||    
T  7080523 taatctttagatctttcttgatagtttctcttatagtttttataggttttcctctacttctaaagatttgactcatctccatctgatccactct 7080430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 546
Target Start/End: Complemental strand, 24666031 - 24665855
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctg 469  Q
    |||||| ||||||||| | || ||| ||||||||||| | | ||||| || ||||||||||||||||||  ||||| ||||| |  |||||||   ||||    
T  24666031 aatgttctatcataaacc-atatttcgatccaactcattgacctctaaatatttcttaatagtttctcttgtagttattctatgacttcctctgcctctg 24665933  T
Q  470 atgatctaactatcctccatctgatctactctacttgcta-tataatctccggaccttctctctacatgtccaaacca 546  Q
     |||||  ||||| || ||||||||||||||| ||| |||  | ||||| | |  |||||||||||||||||||||||    
T  24665932 gtgatccgactatgcttcatctgatctactctccttactacaaaaatctacaggtcttctctctacatgtccaaacca 24665855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 501
Target Start/End: Complemental strand, 12890860 - 12890665
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | | | |||| ||||||||| | || |||||||| ||||    
T  12890860 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaacc-atatttggatctaact 12890762  T
Q  405 cagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    || | |  |||| ||| ||  |||| |||||||| |||||||| |||||  ||| ||||  |||  ||| || ||| ||||||||||||||||||||    
T  12890761 cattgacgtctaaatcctttctaatggtttctcttatagttttcctaggtcttcatctacctcttttgaccttactctcctccatctgatctactct 12890665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 38956 - 38901
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| | ||||||||||| ||| ||||||||||||| ||||||||||||||    
T  38956 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctagg 38901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 517
Target Start/End: Original strand, 4948405 - 4948512
Alignment:
Q  410 atctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgcta 509  Q
    |||||||||||||||| |||||||| |||  |||||||| ||||  ||||||||  |||  || | | |||||| ||||||||||||||||| ||| |||    
T  4948405 atctctagatctttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgatctactctccttacta 4948504  T
Q  510 tataatct 517  Q
     |||||||    
T  4948505 cataatct 4948512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 517
Target Start/End: Original strand, 4955376 - 4955483
Alignment:
Q  410 atctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgcta 509  Q
    |||||||||||||||| |||||||| |||  |||||||| ||||  ||||||||  |||  || | | |||||| ||||||||||||||||| ||| |||    
T  4955376 atctctagatctttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgatctactctccttacta 4955475  T
Q  510 tataatct 517  Q
     |||||||    
T  4955476 cataatct 4955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 438
Target Start/End: Original strand, 43127 - 43181
Alignment:
Q  384 aaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    ||||||| ||| ||||||||||| || ||||||||||||| ||||||||||||||    
T  43127 aaactatattttgatccaactcattactctctagatctttattaatagtttctct 43181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 30875708 - 30875746
Alignment:
Q  194 aaacagttttacaccgacatccaatgagaattcatgata 232  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  30875708 aaacagttttacaccgacatccaatgagaactcatgata 30875746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 1747729 - 1747794
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||| ||||||||||||| ||||||  ||||||||| || |||||||||||  |||||||    
T  1747729 atccaactcattaatctctagatccttcttaccagtttctcttatggtttttctaggtcttcctct 1747794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 6055848 - 6055925
Alignment:
Q  386 actatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||||| |||||||| |||||| ||| ||||| ||||||| ||||||||||||| | ||||||| ||||  ||||||||    
T  6055848 actatatttggatctaactcattaacctctaaatctttcataatagtttctcttaaagtttttataggtcttcctcta 6055925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 453
Target Start/End: Complemental strand, 31818726 - 31818669
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||||| ||||||| | | ||||| ||||||||||||| ||||||||||||||    
T  31818726 gatccaactcattaatctccaaacctttcctaatagtttctcttatagtttttctagg 31818669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 546
Target Start/End: Original strand, 32913355 - 32913499
Alignment:
Q  403 ctcagtaatctctagatctttcttaatagtttc-tctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    |||| ||||||||| | |||||||||||||||| | | ||||||||||||| | || |||||  |||  |||| | |||| ||||||||| || ||||||    
T  32913355 ctcattaatctctaaagctttcttaatagtttctttttatagtttttctagacctttctctacctctagtgatttgactaccctccatctaatatactct 32913454  T
Q  502 acttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
     ||||||| ||||||| |    ||| |||||||||| ||||||||    
T  32913455 ccttgctacataatctacaactcttttctctacatggccaaacca 32913499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 501
Target Start/End: Original strand, 35199714 - 35199814
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactc 500  Q
    |||||| ||||||||||||||||| ||||||||||| | ||| ||||||||    || |||||  |||  |||| | |||| ||||||||||||||||||    
T  35199714 aactcattaatctctagatctttcctaatagtttcttttataatttttctaattcttactctagctctagtgatatgactaccctccatctgatctactc 35199813  T
Q  501 t 501  Q
    |    
T  35199814 t 35199814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 1681611 - 1681650
Alignment:
Q  399 ccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  1681611 ccaactcattaatctctagatccttcttaatagtttctct 1681650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 33997632 - 33997682
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttt 447  Q
    |||||||||| ||||||||||   |||||||||||||||||| ||||||||    
T  33997632 atccaactcattaatctctaggcttttcttaatagtttctcttatagtttt 33997682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 447
Target Start/End: Original strand, 14389223 - 14389299
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttt 447  Q
    |||||| ||||||||| | || |||||||| |||| | ||||||||| ||||||||||| ||||||| ||| ||||||    
T  14389223 aatgttatatcataaacc-atatttggatctaacttattaatctctaaatctttcttaagagtttctgtgacagtttt 14389299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 4245868 - 4245912
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggct 348  Q
    |||||||||||||||||| |||| || |||||||| |||||||||    
T  4245868 aacaacaaaaacaaccaagccttatcccactaagtggggtcggct 4245912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 315 - 546
Target Start/End: Original strand, 34233031 - 34233261
Alignment:
Q  315 caaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctc 414  Q
    ||||||| | ||||| |||| ||| | |||||||  ||| |||||||| | |||||||||| ||||||||| || | ||| |||| |||||| |||||||    
T  34233031 caaccaagcattgtcccactgagtggcgtcggctacatggatcaaattacgctacaatgttctatcataaacct-tattttgatctaactcattaatctc 34233129  T
Q  415 tagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatataa 514  Q
    ||| ||||| | ||||||||||||||||||||||||||| ||||||||   |||  |||||| || ||||||||||| ||||||||| ||| ||| ||||    
T  34233130 taggtctttatgaatagtttctctgatagtttttctaggttttcctctgcctctagtgatctgacgatcctccatctcatctactctccttactacataa 34233229  T
Q  515 tctccggaccttctctctacatgtccaaacca 546  Q
    ||| |      |||||||||||||||||||||    
T  34233230 tctacatgttctctctctacatgtccaaacca 34233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 501
Target Start/End: Complemental strand, 28351766 - 28351649
Alignment:
Q  384 aaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatc 483  Q
    ||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||||||  || |||||  |||  | |||| ||||||    
T  28351766 aaactatatttggatccaactcaataatctctaaatctttcgtaatagtttctcttatagtttttctaggtctttctctacctcttgtaatctgactatc 28351667  T
Q  484 ctccatctgatctactct 501  Q
    ||||||||||||||||||    
T  28351666 ctccatctgatctactct 28351649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 433
Target Start/End: Complemental strand, 25575110 - 25574982
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || |||||| | ||||| |||  ||| |||||||| | | |||||||| ||||||||| | || ||| ||||||||    
T  25575110 aacaacaacaacaaccaagccttatcccactaaatggggtctgctacatggatcaaattacaccacaatgttctatcataaacc-atatttcgatccaac 25575012  T
Q  404 tcagtaatctctagatctttcttaatagtt 433  Q
    ||| ||||||||||||||||||||||||||    
T  25575011 tcattaatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 501
Target Start/End: Complemental strand, 35690557 - 35690361
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| || ||||||  ||| || |||||||| |||||||||  ||| |||||||| | | | |||||| ||||||||| |  || ||||||| |||    
T  35690557 aacaacaacaaaaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccc-tgattggatcaaac 35690459  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||| ||| ||||| || |||| ||||||||||||| ||||||||||||||  ||||||||  |||  |||||| ||| |||||||||| ||| |||||    
T  35690458 tcattaacctctaaatttttcgtaatagtttctcttatagtttttctaggtcttcctctacctcttttgatctgactttcctccatctaatccactct 35690361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 313 - 501
Target Start/End: Original strand, 26037510 - 26037697
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    |||||||||||||| || |||||||| |||||||||  ||| ||| |||| | | | | |||| ||||||||| | || ||||||||||||||| | | |    
T  26037510 aacaaccaaaccttatcccactaagtggggtcggctacatggatccaattacgccatagtgttctatcataaacc-atatttggatccaactcattcacc 26037608  T
Q  413 tctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    |||| ||||||| ||||||||||||| || ||||| ||||| ||||||||   |||  | | || ||| ||||||||||||||||||||    
T  26037609 tctaaatctttcctaatagtttctcttatggttttcctaggttttcctctgcctcttttaacctgactctcctccatctgatctactct 26037697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 546
Target Start/End: Original strand, 13805261 - 13805502
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| || | || |||||||| |||| ||||  ||| ||||||||  || | |||||| ||||||||| | || |||   ||||||    
T  13805261 aacaacaacaacaaccaagccatatcccactaagtggggttggctacatggatcaaattatcccataatgttctatcataaacc-atatttccgtccaac 13805359  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctac 503  Q
    | | || |||| | ||||||||| ||||||||||| |||||||||||||| ||||||||   |||  |||||| || ||||||||| ||||||| ||| |    
T  13805360 ttattactctcaaaatctttcttcatagtttctcttatagtttttctaggttttcctctgcctctagtgatctgacaatcctccatgtgatctagtctcc 13805459  T
Q  504 ttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||||| | |||||   |  |||||||||||||  ||||||||    
T  13805460 ttgctacaaaatctaaaggtcttctctctacatacccaaacca 13805502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 447
Target Start/End: Original strand, 26024855 - 26024988
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    ||||||||| |||| || ||||||||  ||||||||  ||| || ||||| | | | |||||| ||||||||| | |||| | ||||||||||| |||||    
T  26024855 aacaaccaagccttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaacc-atgtctcgatccaactcattaatc 26024953  T
Q  413 tctagatctttcttaatagtttctctgatagtttt 447  Q
    |||||||||||||||||||||||||  ||||||||    
T  26024954 tctagatctttcttaatagtttctcatatagtttt 26024988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 501
Target Start/End: Original strand, 45204837 - 45205030
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcc-cctacaatgttttatcataaaactatgtttggatccaac 403  Q
    ||||||| ||||||||| |||| || |||||||| |||| ||||  ||  |||||||| | ||||  ||||| ||||||||| | || ||||||||||||    
T  45204837 acaacaacaacaaccaagccttatcccactaagttgggtgggctacatagatcaaattacgccta--atgttctatcataaacc-atatttggatccaac 45204933  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    | | ||| ||||| ||||||| ||||||||||||| ||||||||||||||  |||||| |  |||  ||||||  || ||||||||||||||||||||    
T  45204934 ttattaaactctaaatctttcctaatagtttctcttatagtttttctaggtcttcctccacctcttttgatct-gctctcctccatctgatctactct 45205030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 452
Target Start/End: Original strand, 56439567 - 56439714
Alignment:
Q  305 acaacaaaaacaaccaaa-ccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    ||||||| ||||| |||| |||| || |||||||| |||| |||| |||| || ||||| | ||| |||||| ||||||||| | || ||| ||||||||    
T  56439567 acaacaacaacaagcaaagccttttcgcactaagtggggttggctatatggattaaattacgctataatgttctatcataaacc-atatttcgatccaac 56439665  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    | | |||| || | ||||||| |||||||||||||||||||||||||||    
T  56439666 taattaatttccaaatctttcataatagtttctctgatagtttttctag 56439714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 452
Target Start/End: Original strand, 934519 - 934574
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||    
T  934519 atccaactcattaatctctagaactttcttaatagtttctctaatagtttttctag 934574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 10209229 - 10209174
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  10209229 tccaactcattaatctctagatccttcttaatagtttctcttatagtttttctagg 10209174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 516
Target Start/End: Complemental strand, 47147567 - 47147448
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| |||||||||||||||||||||||||||||   ||||||||||||||  |||||||   |||  |||||  ||||  ||||||||||| |    
T  47147567 atccaactcattaatctctagatctttcttaatagtttcttctatagtttttctaggtcttcctctgcctctagtgatccgactactctccatctgattt 47147468  T
Q  497 actctacttgctatataatc 516  Q
    ||||| ||| ||| ||||||    
T  47147467 actctccttactacataatc 47147448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 501
Target Start/End: Original strand, 25967360 - 25967453
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    |||||||||||||||| |||||||||||||| |||||| ||| | |  ||||||| | |||  |||| |||||||||| |||||||||||||||    
T  25967360 taatctctagatcttttttaatagtttctcttatagttattcaaagtcttcctctgtctctagtgatttaactatccttcatctgatctactct 25967453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 37488377 - 37488229
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || |||||||| |||  ||||  ||| |||||||| | | | |||| | |||||| || | || ||| |||| |||    
T  37488377 aacaacaacaacaaccaagccttatcccactaagtggggctggctacatggatcaaattacgccataatgctctatcattaacc-atattttgatcaaac 37488279  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    | | |||| |||||||||||||||||||||||||| ||||||||||||||    
T  37488278 ttattaatttctagatctttcttaatagtttctcttatagtttttctagg 37488229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 453
Target Start/End: Complemental strand, 50680935 - 50680878
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||    
T  50680935 gatccaactcattaatctctagatctttctaaataatttctcttatagtttttctagg 50680878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 518
Target Start/End: Original strand, 21945727 - 21945847
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    ||||||||| |||| || | ||||||| ||||||||||| ||||||||||||||||  ||||||    |||  |||| | ||||||||||||||||||||    
T  21945727 tccaactcattaatttccaaatctttcctaatagtttctatgatagtttttctaggtcttcctcagcctctagtgatgtgactatcctccatctgatcta 21945826  T
Q  498 ctctacttgctatataatctc 518  Q
    |||| ||| ||| | ||||||    
T  21945827 ctctccttactacagaatctc 21945847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 437
Target Start/End: Original strand, 26024984 - 26025047
Alignment:
Q  373 gttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctc 437  Q
    ||||||||||||| | |||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  26024984 gttttatcataaacc-atgtctcgatccaactcattaatctctagatctttcttaatagtttctc 26025047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 31961355 - 31961410
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||||    
T  31961355 tccaactcatttatctctagatctttcctaatagtttctcttatagtttttctagg 31961410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 501
Target Start/End: Complemental strand, 51421950 - 51421820
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctg 469  Q
    |||||| ||||||||| | || ||||||||||| ||| ||| ||||| ||||||| ||||||||||||| ||||||||||||    ||||||||  |||     
T  51421950 aatgttctatcataaacc-atttttggatccaattcattaacctctaaatctttcctaatagtttctcttatagtttttctaaatcttcctctacctctt 51421852  T
Q  470 atgatctaactatcctccatctgatctactct 501  Q
     |||||| || | ||||||| |||||||||||    
T  51421851 ttgatctgacaaacctccatttgatctactct 51421820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 474
Target Start/End: Complemental strand, 20999191 - 20999117
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgat 474  Q
    ||||||| ||| ||||||||||||||||||||||| | | ||||||||||||||  ||||||| ||||| |||||    
T  20999191 caactcattaaactctagatctttcttaatagtttatattatagtttttctaggtcttcctctgtttctaatgat 20999117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 443
Target Start/End: Original strand, 37042752 - 37042798
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatag 443  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  37042752 atccaactcaataatctctagatctttcttaatagtttctcttatag 37042798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 463
Target Start/End: Original strand, 55809075 - 55809144
Alignment:
Q  394 tggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||||||||||||| ||| ||||| ||||||| ||| ||||||||| ||||||||||||||  ||||||||    
T  55809075 tggatccaactcattaacctctaaatctttcctaacagtttctcttatagtttttctaggtcttcctcta 55809144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 463
Target Start/End: Original strand, 53518347 - 53518477
Alignment:
Q  331 cactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaata 430  Q
    |||||||| |||||| ||| ||| |||||||| | | | | |||| ||||||||| | || ||| ||||||||||| ||| ||||| ||||||| || ||    
T  53518347 cactaagtggggtcg-ctgcatggatcaaattacgccatagtgttctatcataaacc-atatttagatccaactcattaacctctaaatctttcctatta 53518444  T
Q  431 gtttctctgatagtttttctaggctttcctcta 463  Q
    |||| ||| ||||||||||||||| ||||||||    
T  53518445 gtttttctcatagtttttctaggccttcctcta 53518477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 435
Target Start/End: Complemental strand, 5306582 - 5306452
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || ||| |||| ||||  ||| |||| |||||||| | | | |||||| | ||||||| | || ||||||||||||    
T  5306582 aacaacaacaacaaccaagccttatcccaccaagtggggttagctatatggatcaaattacgccataatgttatgtcataaacc-atatttggatccaac 5306484  T
Q  404 tcagtaatctctagatctttcttaatagtttc 435  Q
    ||| ||||||||||||| ||| || |||||||    
T  5306483 tcattaatctctagatccttcctactagtttc 5306452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 31897517 - 31897572
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| | ||||||||||| ||| ||||||||||||| ||||||||||||||    
T  31897517 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctagg 31897572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 42293357 - 42293404
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagttttt 448  Q
    |||||| |||| |||||||||||||||||||||||||| |||||||||    
T  42293357 aactcattaatttctagatctttcttaatagtttctcttatagttttt 42293404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 452
Target Start/End: Original strand, 42639108 - 42639163
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    |||||||||| ||||| |||||||||||||||||||||||||   |||||||||||    
T  42639108 atccaactcattaatcgctagatctttcttaatagtttctcttgcagtttttctag 42639163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 46372217 - 46372162
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| | ||||||||||| ||| ||||||||||||| ||||||||||||||    
T  46372217 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctagg 46372162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 7544610 - 7544652
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    |||| |||||| |||||||||||||||||||||||||||||||    
T  7544610 gatcaaactcattaatctctagatctttcttaatagtttctct 7544652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 453
Target Start/End: Original strand, 8599047 - 8599085
Alignment:
Q  415 tagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8599047 tagatctttcttaatagtttctcttatagtttttctagg 8599085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 491
Target Start/End: Complemental strand, 18966799 - 18966705
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatct 491  Q
    ||||| |||| |||||| |||||||||||||||||||||||| |||||| || ||||  ||| ||||  |||  ||||  |||||||||||||||    
T  18966799 atccagctcactaatctgtagatctttcttaatagtttctcttatagttgttttaggtcttcttctacctctagtgattgaactatcctccatct 18966705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 453
Target Start/End: Complemental strand, 26356811 - 26356757
Alignment:
Q  399 ccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||||||    
T  26356811 ccaactcattaatctctagatccttcataacagtttctcttatagtttttctagg 26356757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 31043271 - 31043225
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  31043271 tttggatccaactcattaatctctaaatctttcctaatagtttctct 31043225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 40018277 - 40018331
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    |||||||||| | ||||||||||||||||||| ||||| ||| ||||||||||||    
T  40018277 atccaactcattgatctctagatctttcttaacagtttttcttatagtttttcta 40018331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 453
Target Start/End: Complemental strand, 21107191 - 21107130
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||||||| | ||||| ||| | ||||| ||||||||||||| ||||||||||||||    
T  21107191 tttggatccaactaattaatcactaaaactttcctaatagtttctcttatagtttttctagg 21107130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 451
Target Start/End: Original strand, 21214675 - 21214728
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    ||||||||| || ||| |||| ||||||||||||||||||| ||||||||||||    
T  21214675 tccaactcattactctatagacctttcttaatagtttctcttatagtttttcta 21214728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 33225932 - 33225977
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  33225932 taatctctaaatctttcttaatagtttctcttataatttttctagg 33225977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 501
Target Start/End: Complemental strand, 39708632 - 39708523
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatct 491  Q
    ||||||||||||||| | | ||||| ||| ||  |||| |||||||| |||||||| |||||  ||||||||  |||  ||| || ||| ||||||||||    
T  39708632 tttggatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctcttttgacctgactctcctccatct 39708533  T
Q  492 gatctactct 501  Q
    ||||||||||    
T  39708532 gatctactct 39708523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 45569097 - 45569162
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||| | |||||||||| |||||||||||||||||| ||| | ||||||||  |||||||    
T  45569097 atccaactcattgatctctagatttttcttaatagtttctcttataatgtttctaggtcttcctct 45569162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 49987606 - 49987537
Alignment:
Q  393 ttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    ||||||||| |||| | ||||| |  |||||||||||||||||||| ||||||||||||||  |||||||    
T  49987606 ttggatccatctcatttatctccaagtctttcttaatagtttctcttatagtttttctaggtcttcctct 49987537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 543
Target Start/End: Complemental strand, 50662608 - 50662436
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctg 469  Q
    ||||| |||||||||| | || ||| |||| |||||| |||||||||||||||| | |||| ||||||| ||| ||||||||||  | |||||   | |     
T  50662608 aatgtgttatcataaacc-atatttcgatcaaactcattaatctctagatctttttaaataatttctcttataatttttctaggactacctctgcattta 50662510  T
Q  470 atgatctaactatcctccatctgatctactctacttgctatataatctccggaccttctctctacatgtccaaa 543  Q
     ||||||||||||||| |||  |||||||||| ||| | ||| ||||| |    |||||||||||||| |||||    
T  50662509 gtgatctaactatccttcattagatctactctccttacaatagaatctacaagtcttctctctacatgcccaaa 50662436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 54470401 - 54470348
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttct 450  Q
    |||||||||| ||||||||||| |||| ||||||| |||||| |||||||||||    
T  54470401 atccaactcattaatctctagaactttattaatagattctcttatagtttttct 54470348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 20047629 - 20047581
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtt 445  Q
    |||||||||| |||||||||||||||  |||||||||||||| ||||||    
T  20047629 atccaactcattaatctctagatcttctttaatagtttctcttatagtt 20047581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 501
Target Start/End: Complemental strand, 33710118 - 33710014
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| |||||||||||||  |||||||||||||||  || |||||| || || |||| || | |||  |||||| |||| ||||| |||||||     
T  33710118 atccaactcattaatctctagatcagtcttaatagtttctcgtatggtttttataagcattcccctgtctctagtgatctgactaccctccttctgatcc 33710019  T
Q  497 actct 501  Q
    |||||    
T  33710018 actct 33710014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 462
Target Start/End: Original strand, 40268364 - 40268415
Alignment:
Q  410 atctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||| |||||||||||||||||| |||| |||||||||| |||||||    
T  40268364 atctctagatttttcttaatagtttctcttatag-ttttctaggccttcctct 40268415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 49738638 - 49738694
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||||| |||| |||||||| ||||||||||||| | | ||||||||||||||    
T  49738638 atccaactcattaatttctagatccttcttaatagtttttattatagtttttctagg 49738694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 462
Target Start/End: Complemental strand, 53540576 - 53540419
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaac-tatgtttggatccaa 402  Q
    |||||||| |||||||||  ||| || |||| ||| |||| |||| |||| ||||||||   | | |||||| ||||||||| | ||| ||||  |||||    
T  53540576 aacaacaataacaaccaagtcttatcccactcagtggggttggctatatggatcaaattatgccataatgttctatcataaaccatatttttg--tccaa 53540479  T
Q  403 ctcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||| ||||||| |  |||||| ||||||||| ||| ||||||||||||||  |||||||    
T  53540478 ctcattaatctccaagtctttcctaatagtttatcttatagtttttctaggtcttcctct 53540419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 444
Target Start/End: Complemental strand, 6843805 - 6843762
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagt 444  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||    
T  6843805 aactcattaatctctagatctttcttaatagtctctcttatagt 6843762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 21879241 - 21879292
Alignment:
Q  397 atccaactcagtaatctctagatctttctt-aatagtttctctgatagtttt 447  Q
    |||||||||| | ||||||||||||||||| |||||||||||| ||||||||    
T  21879241 atccaactcattcatctctagatctttcttgaatagtttctcttatagtttt 21879292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 30853534 - 30853483
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    ||||||| |||||| ||||| |||| ||||||||||||| ||||||||||||    
T  30853534 caactcattaatctttagatttttcataatagtttctcttatagtttttcta 30853483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 452
Target Start/End: Original strand, 31403122 - 31403177
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    |||||||| | ||||||||||||||||| ||||||||| ||| ||||||| |||||    
T  31403122 atccaactaattaatctctagatctttcataatagtttttcttatagtttctctag 31403177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 452
Target Start/End: Original strand, 2557734 - 2557815
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    |||||| ||||||||| | || ||| ||||||||||  ||||||  ||||| ||||||||||||||||| | |||||||||||    
T  2557734 aatgttctatcataaacc-atatttcgatccaactcgttaatcttcagatccttcttaatagtttctcttacagtttttctag 2557815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 7682002 - 7682100
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctact 499  Q
    |||||| |||||| ||||| |||||| ||||||||||| |||||||||| |||  |||||||   |||  |||| | |||| ||||||||| |||||||    
T  7682002 aactcattaatctatagatttttcttgatagtttctcttatagtttttccaggtcttcctctgcctctagtgatgtgactaccctccatctaatctact 7682100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 546
Target Start/End: Complemental strand, 28497600 - 28497534
Alignment:
Q  480 tatcctccatctgatctactctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||||||||||||||||||||| ||| ||| ||||||| |    |||||||||||||| ||||||||    
T  28497600 tatcctccatctgatctactctccttactacataatctacaagtcttctctctacatgcccaaacca 28497534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 447
Target Start/End: Original strand, 38903810 - 38903856
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttt 447  Q
    |||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  38903810 aactcattaatctttaggtctttcttaatagtttctcttatagtttt 38903856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 431
Target Start/End: Original strand, 55388216 - 55388333
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    ||||||||| |||| || |||||||| |||||| |   ||| |||||||| | | |||||||| ||||||||| | || ||| |||| |||||| |||||    
T  55388216 aacaaccaagccttatcccactaagtggggtcgacaacatggatcaaattacaccacaatgttctatcataaatc-atatttcgatctaactcattaatc 55388314  T
Q  413 tctagatctttcttaatag 431  Q
    || | ||||||||||||||    
T  55388315 tccaaatctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 501
Target Start/End: Complemental strand, 56439779 - 56439749
Alignment:
Q  471 tgatctaactatcctccatctgatctactct 501  Q
    |||||||||||||||||||||||||||||||    
T  56439779 tgatctaactatcctccatctgatctactct 56439749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 501
Target Start/End: Original strand, 6478786 - 6478875
Alignment:
Q  412 ctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||||||||| ||| |||||||||||||  | |||||||||||  | || |||  |||| ||||||||||  | |||||||||||||||||    
T  6478786 ctctagatccttcctaatagtttctcttgtcgtttttctaggtctacccctagctctggtgatctaactcccttccatctgatctactct 6478875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 29182646 - 29182605
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    |||||||||| ||||||||||||  |||||||||||||||||    
T  29182646 atccaactcattaatctctagatacttcttaatagtttctct 29182605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 2589266 - 2589210
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||||| |||||||||||||  |||| ||||||||||| ||  ||||||||||    
T  2589266 atccaactcattaatctctagatccatcttgatagtttctcttatgctttttctagg 2589210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 20105607 - 20105659
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttct 450  Q
    |||||||||  ||||||||||||||||||| | |||||| | |||||||||||    
T  20105607 tccaactcatcaatctctagatctttcttagtcgtttcttttatagtttttct 20105659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 385
Target Start/End: Complemental strand, 29399089 - 29399009
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaa 385  Q
    ||||||| ||||||||| |||| || |||||||| ||||| |||  |||||||||||| | | | |||||| |||||||||    
T  29399089 acaacaacaacaaccaagccttttcccactaagtggggtcagctacatgaatcaaattacgccataatgttctatcataaa 29399009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 30621290 - 30621330
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    |||||| || ||||||||| |||||||||||||||||||||    
T  30621290 tccaacacattaatctctaaatctttcttaatagtttctct 30621330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 452
Target Start/End: Complemental strand, 34809205 - 34809161
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    ||||| ||||| |||| ||||||||| ||||||||||||||||||    
T  34809205 taatcgctagaacttttttaatagttactctgatagtttttctag 34809161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 429
Target Start/End: Original strand, 44047459 - 44047491
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaat 429  Q
    |||||||||| ||||||||||||||||||||||    
T  44047459 atccaactcattaatctctagatctttcttaat 44047491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 44385024 - 44384988
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtt 433  Q
    |||||||| | ||||||||||||||||||||||||||    
T  44385024 atccaacttattaatctctagatctttcttaatagtt 44384988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 300 - 546
Target Start/End: Complemental strand, 29520939 - 29520695
Alignment:
Q  300 atagaacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatc 399  Q
    ||||||| |||| ||||||||| | || || |||||| | |||| ||||  ||| |||||||| | | | |||||| ||||||||| | || ||||||||    
T  29520939 atagaactacaacaacaaccaagcattatcccactaaatggggtgggctacatggatcaaattacgccataatgttctatcataaacc-atatttggatc 29520841  T
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctact 499  Q
    ||||||| ||||||||| ||| ||| ||| ||||||||| ||||||||||||||| ||||||||  |||  |||| | ||||||||||||||||||||||    
T  29520840 caactcattaatctctaaatcgttcctaacagtttctcttatagtttttctaggc-ttcctctacctcttgtgatttgactatcctccatctgatctact 29520742  T
Q  500 ctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    || ||| ||| | ||||| |    |||||||||||||| ||||||||    
T  29520741 ctccttactacaaaatctacaagtcttctctctacatgcccaaacca 29520695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 546
Target Start/End: Original strand, 35914601 - 35914838
Alignment:
Q  308 acaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcag 407  Q
    |||| |||||||||  ||| ||||||||||| ||||| |||  ||| |||||||| | | | |||||| ||||||||| | || ||| | |||||||||     
T  35914601 acaacaacaaccaagtcttatctcactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaacc-atattttggtccaactcat 35914699  T
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgc 507  Q
    ||||||  |  |||||| ||||||||||||| |||||||||||| |  ||||||| | |||   ||||| |||||||||||||||| ||||||| |||||    
T  35914700 taatcttcaagtctttcctaatagtttctcttatagtttttctatgtcttcctctgtctctagggatctgactatcctccatctgacctactctccttgc 35914799  T
Q  508 tatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||| |||||   |  ||||||||||| || ||||||||    
T  35914800 tataaaatctataggtcttctctctacgtgcccaaacca 35914838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 308 - 491
Target Start/End: Complemental strand, 2216568 - 2216388
Alignment:
Q  308 acaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcag 407  Q
    |||| ||| ||||| |||| ||||||| ||| |||||||||  ||| |||||||| | ||| |||||| |||||||||  |||  | ||||||||||||     
T  2216568 acaacaaccaccaagccttatctcactgagtggggtcggctacatggatcaaattacactataatgttctatcataaacatat--taggatccaactcat 2216471  T
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatct 491  Q
    | ||||||| ||||| ||||||||||||||| ||  ||||||||||  ||||||||  |||  |||||| ||||||||||||||    
T  2216470 tgatctctaaatctt-cttaatagtttctcttatgttttttctaggtcttcctctacctctagtgatctgactatcctccatct 2216388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 38178348 - 38178452
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| |||| ||||| ||||| |||||||||||||| ||||||||||||||  ||||||||  |||   ||| | |||||||||||||||||||    
T  38178348 atccaactcattaatgtctaggtctttgttaatagtttctcttatagtttttctaggtcttcctctacctctagcgatttgactatcctccatctgatct 38178447  T
Q  497 actct 501  Q
    |||||    
T  38178448 actct 38178452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 462
Target Start/End: Original strand, 35643693 - 35643759
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||  |||||||    
T  35643693 gatccaactcattaatctctagatctttcttaataatttctcttatagtttttctaggtcttcctct 35643759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 4011277 - 4011212
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||  |||||||    
T  4011277 atccaactcattaatctttagatctttcttaatagtttctcttatagtttttctaggtcttcctct 4011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 39967587 - 39967644
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggc 454  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  39967587 atccaactcattaatcgctagatctttcttaatagtttctcttatagtttttctaggc 39967644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 501
Target Start/End: Complemental strand, 45419517 - 45419325
Alignment:
Q  308 acaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcag 407  Q
    |||| ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | | |||||| ||||||||| | |  |||||||| ||||||     
T  45419517 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccataatgttctatcataaaccaaa-tttggatcaaactcat 45419419  T
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||   | || | ||||| ||||||||||||| ||||||||||||||  ||||||||  |||   ||||| ||| ||||||||||||||||||||    
T  45419418 tatgatttaaacctttcctaatagtttctcttatagtttttctaggtcttcctctacctcttcagatctgactctcctccatctgatctactct 45419325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 23023419 - 23023353
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    |||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||  ||||||||    
T  23023419 atccaactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcctcta 23023353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 79221 - 79156
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    ||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||| || |||||||    
T  79221 atccagctcattaatctctagatctttcttaatagtttctcttatagtgtttctaagccttcctct 79156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 501
Target Start/End: Complemental strand, 5908841 - 5908736
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatc 495  Q
    ||||||||||| |||||  | ||||||| |||||||||||||| ||||||||||||||  ||||| | | |||  |||||| || |||||||| ||||||    
T  5908841 gatccaactcattaatccttggatcttttttaatagtttctcttatagtttttctaggtcttcctatgtctctagtgatctgaccatcctccacctgatc 5908742  T
Q  496 tactct 501  Q
    ||||||    
T  5908741 tactct 5908736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 546
Target Start/End: Original strand, 10079995 - 10080144
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| ||||||| ||||||  ||||||||  |||  |||| | |||  ||| ||| ||||||    
T  10079995 atccaactcattaatctctagatctttcttaacagtttttcttatagtttctctaggtcttcctctacctctagtgatttgactccccttcatttgatct 10080094  T
Q  497 actctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    ||||| ||| ||| | ||||  | |  |||||||||||||| ||||||||    
T  10080095 actctccttactacaaaatcctcaggtcttctctctacatgcccaaacca 10080144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 453
Target Start/End: Complemental strand, 16351569 - 16351516
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  16351569 caactcattaatctctagatccttcttaatagtttctctaatagtttttctagg 16351516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 495
Target Start/End: Complemental strand, 30559890 - 30559789
Alignment:
Q  394 tggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctga 493  Q
    ||||||||||||| ||||||||| ||||||| | ||||||||||| ||||||||| || |  ||| ||||| |||  |||||  ||||||||||||||||    
T  30559890 tggatccaactcattaatctctaaatctttcctgatagtttctcttatagtttttttaagtcttcatctatctctagtgatccgactatcctccatctga 30559791  T
Q  494 tc 495  Q
    ||    
T  30559790 tc 30559789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 543
Target Start/End: Complemental strand, 32931154 - 32931009
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    ||||||||| |||| || | ||||||| ||||||||||||||||||||||| ||||  |||||||   |||  |||| | ||||||||||||||||||||    
T  32931154 tccaactcattaatttcaaaatctttcctaatagtttctctgatagtttttttaggtcttcctctgcctctagtgatatgactatcctccatctgatcta 32931055  T
Q  498 ctctacttgctatataatctccggaccttctctctacatgtccaaa 543  Q
     ||| ||| ||| | |||||   ||  |||| ||||||||||||||    
T  32931054 gtctccttactacagaatctatagattttctttctacatgtccaaa 32931009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 509
Target Start/End: Original strand, 35362655 - 35362850
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    ||||||||| |||| || |||||||| |||| ||||| ||| |||||||| | | | |||||| ||||||| | | || |||   ||||||||| ||||     
T  35362655 aacaaccaagccttttcccactaagtggggttggctgcatggatcaaattacgccataatgttctatcatacacc-atatttcagtccaactcattaatt 35362753  T
Q  413 tctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgcta 509  Q
    || | ||||||| |||||||||||| |||||||||||||||  |||||||   | |   ||| | |||||||||||| ||||||||||| |||||||    
T  35362754 tccaaatctttcctaatagtttctccgatagtttttctaggtcttcctctgcctatagggatttgactatcctccatttgatctactctccttgcta 35362850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 435
Target Start/End: Complemental strand, 490621 - 490491
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||| ||| |||| || |||||||| |||||||||  ||| |||||||| | | | |||||| ||||||||| | || ||||||||||||    
T  490621 aacaacaacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaacc-atatttggatccaac 490523  T
Q  404 tcagtaatctctagatctttcttaatagtttc 435  Q
    |||  |||||||| ||||||| | ||||||||    
T  490522 tcatcaatctctaaatctttccttatagtttc 490491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 463
Target Start/End: Complemental strand, 28169677 - 28169520
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| | ||||||| |||| || |||||||| |||| || | |||| || ||||| | | | ||| |||||||||||| | || |||| |||||||    
T  28169677 aacaacaacatcaaccaagccttatc-cactaagtggggttggttatatggataaaattacaccataatattttatcataaacc-atatttgaatccaac 28169580  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||| ||||||| | ||||||| ||||||||||||| ||||||||| ||||  ||||||||    
T  28169579 tcattaatctcaaaatctttcctaatagtttctcttatagtttttttaggtcttcctcta 28169520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 491
Target Start/End: Original strand, 30783129 - 30783224
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatct 491  Q
    ||||||||||| |||||||||||||||||| |||||||||||| || ||||| ||||   |||||||   |||  |||||| ||||||||||||||    
T  30783129 gatccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcctctagtgatctgactatcctccatct 30783224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 16994532 - 16994597
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||| ||||||||| ||| ||||||||||||||||  ||||||||||||||  |||||||    
T  16994532 atccaactcaataatctctaaatcattcttaatagtttctcatatagtttttctaggtcttcctct 16994597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 39388977 - 39388920
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctc-tgatagtttttctagg 453  Q
    |||||||||| ||||||||||||||||| |||||||||||| | ||||||||||||||    
T  39388977 atccaactcattaatctctagatctttcctaatagtttctctttatagtttttctagg 39388920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 546
Target Start/End: Original strand, 43904698 - 43904902
Alignment:
Q  341 ggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctga 440  Q
    ||||||||  ||| |||||||| | | | |||||| ||||||||| | || ||| ||||||||||| ||||||||| |||| || |||  |||||||| |    
T  43904698 ggtcggctacatggatcaaattacgccataatgttctatcataaacc-atatttagatccaactcattaatctctaaatctctcataaccgtttctctta 43904796  T
Q  441 tagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatataatctccggaccttctctctacatgtcc 540  Q
    |||| ||||||||  ||||| ||  |||  | || | |||||||||||||||||||| ||| ||| ||| |  ||||   |  |||||||||||||||||    
T  43904797 tagtatttctaggtcttcctgtacctcttgtaatttgactatcctccatctgatctattcttcttactacaacatctataggtcttctctctacatgtcc 43904896  T
Q  541 aaacca 546  Q
    ||||||    
T  43904897 aaacca 43904902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 499
Target Start/End: Complemental strand, 24558676 - 24558579
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    |||| |||| ||||||||| ||||||||||||| ||||||| || |||||||| ||  |||||||| ||    |||| | ||||||||||||||||||||    
T  24558676 tccagctcattaatctctaaatctttcttaataatttctcttattgtttttctcggtcttcctctactt----tgatttgactatcctccatctgatcta 24558581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 483 - 546
Target Start/End: Complemental strand, 6483365 - 6483302
Alignment:
Q  483 cctccatctgatctactctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||||| ||||||||||| |||||||| | |||||||||| |||| ||||||||| ||||||||    
T  6483365 cctccagctgatctactcgacttgctacaaaatctccggaacttccctctacatgcccaaacca 6483302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 9904944 - 9905026
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||||||||||| || | ||| ||||||| ||| |||| |||| |||||| ||||||||||||||  |||||||||||||    
T  9904944 aatgttttatcataaacct-tattttgatccaaatcattaatttctaaatctttattaatagtttctcttgtagtttttctagg 9905026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 451
Target Start/End: Original strand, 30198353 - 30198408
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    ||||||||||| ||||||| | ||||||||||||| ||||||| ||||||||||||    
T  30198353 gatccaactcattaatctcaatatctttcttaataatttctcttatagtttttcta 30198408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 516
Target Start/End: Original strand, 7531733 - 7531851
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    ||||||||| | ||||||||||| ||| ||||||||||||  ||||||||||||||  | ||  ||  |||  |||||| |||  |||||||||||||||    
T  7531733 tccaactcatttatctctagatccttcctaatagtttctcgtatagtttttctaggtctacccttacctctagtgatctgactcccctccatctgatcta 7531832  T
Q  498 ctctacttgctatataatc 516  Q
    |||| ||| ||| ||||||    
T  7531833 ctctccttactacataatc 7531851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 453
Target Start/End: Original strand, 16035750 - 16035871
Alignment:
Q  331 cactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaata 430  Q
    |||||||| ||||| |||  |||||||||||| |   | |||||| || |||||| | || ||| ||||||||| |||||||||||||| |||||||| |    
T  16035750 cactaagtggggtcagctacatgaatcaaattacgtcataatgttctaccataaacc-atatttcgatccaactaagtaatctctagatatttcttaaca 16035848  T
Q  431 gtttctctgatagtttttctagg 453  Q
    |||||||| ||||| ||| ||||    
T  16035849 gtttctcttatagtctttttagg 16035871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 24399877 - 24399931
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    |||||||||| ||||||| ||||| ||||||||||||||||| ||| ||||||||    
T  24399877 atccaactcattaatctcgagatccttcttaatagtttctcttataatttttcta 24399931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 462
Target Start/End: Original strand, 38391980 - 38392046
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    ||||| ||||| |||||| ||||||||||||||| |||||||  ||||||||||||||  |||||||    
T  38391980 gatcccactcattaatctgtagatctttcttaatggtttctcatatagtttttctaggtcttcctct 38392046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 43733401 - 43733335
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    |||||||||| ||||||||||||| ||||  |||||||||||  |||||||||||||  ||||||||    
T  43733401 atccaactcattaatctctagatccttctcgatagtttctcttgtagtttttctaggtcttcctcta 43733335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 462
Target Start/End: Original strand, 45512578 - 45512648
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||| |||||| ||||||| |  |||||| ||||||||||||| ||||||||||||||  |||||||    
T  45512578 tttggatcgaactcattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctct 45512648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 10108996 - 10108951
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||||||||||||||| |||||||||| || |||||||||||    
T  10108996 taatctctagatctttcttattagtttctcttatggtttttctagg 10108951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 454
Target Start/End: Original strand, 5127379 - 5127415
Alignment:
Q  418 atctttcttaatagtttctctgatagtttttctaggc 454  Q
    ||||||||||||||||||||| |||||||||||||||    
T  5127379 atctttcttaatagtttctcttatagtttttctaggc 5127415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 8559410 - 8559446
Alignment:
Q  187 tgatgtaaaacagttttacaccgacatccaatgagaa 223  Q
    ||||||||||||||||||||| |||||||||||||||    
T  8559410 tgatgtaaaacagttttacacagacatccaatgagaa 8559446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 24739936 - 24739992
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||| | ||||||||| |||||||| |||||||||||| ||| ||||||||||    
T  24739936 atccaactgattaatctctacatctttctcaatagtttctcttataatttttctagg 24739992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 17491743 - 17491798
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| ||||||| |  |||||||||||||||||||| | ||||||||||||    
T  17491743 tccaactcattaatctccaagtctttcttaatagtttctcttacagtttttctagg 17491798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 462
Target Start/End: Original strand, 45331674 - 45331721
Alignment:
Q  415 tagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    ||||||||||||||||| ||| || |||||||||||||| ||||||||    
T  45331674 tagatctttcttaataggttccctaatagtttttctaggttttcctct 45331721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 438
Target Start/End: Complemental strand, 16705942 - 16705900
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    ||||||||||| |||||||||| | ||||||||||||||||||    
T  16705942 gatccaactcattaatctctagctttttcttaatagtttctct 16705900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 501
Target Start/End: Complemental strand, 29700448 - 29700366
Alignment:
Q  419 tctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    |||||| || ||||||||||  |||||||||||||  ||||||||  |||  |||| | |||||||||||||| |||||||||    
T  29700448 tctttcctattagtttctcttttagtttttctaggtcttcctctacctctagtgatatgactatcctccatctaatctactct 29700366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 451
Target Start/End: Original strand, 7615657 - 7615733
Alignment:
Q  374 ttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    |||||||||||| |||| ||| ||||||||||| |||| | || || |||||||||| ||||||| ||| ||||||||    
T  7615657 ttttatcataaa-ctatatttcgatccaactcattaatttttaaatttttcttaatattttctcttataatttttcta 7615733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 9070171 - 9070126
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||||||||| || ||||||||| ||| ||||||||||||||    
T  9070171 taatctctagatctatcataatagtttttcttatagtttttctagg 9070126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 451
Target Start/End: Original strand, 16971843 - 16971896
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    ||||||||| |||||| || ||| |||||||| |||||||| ||||||||||||    
T  16971843 tccaactcattaatctttatatccttcttaatcgtttctcttatagtttttcta 16971896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 453
Target Start/End: Original strand, 28269762 - 28269822
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||||||||| ||| ||||| ||||| || |||||||||||| ||| ||||||||||    
T  28269762 tttggatccaactcattaacctctaaatcttgct-aatagtttctcttataatttttctagg 28269822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 546
Target Start/End: Original strand, 41971910 - 41972015
Alignment:
Q  441 tagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatataatctccggaccttctctctacatgtcc 540  Q
    ||||||||||||| |||||| |   |||  |||| | |||||| |||| |||||||||||| ||||||| | ||||| |    |||||||||||||||||    
T  41971910 tagtttttctaggttttcctttgcctctagtgatttgactatcgtccacctgatctactctccttgctagaaaatctacacgtcttctctctacatgtcc 41972009  T
Q  541 aaacca 546  Q
    ||||||    
T  41972010 aaacca 41972015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 438
Target Start/End: Original strand, 45041399 - 45041444
Alignment:
Q  393 ttggatccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    |||||||||||||| ||| ||||| ||||||| |||||||||||||    
T  45041399 ttggatccaactcattaacctctaaatctttcctaatagtttctct 45041444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 3079692 - 3079740
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtt 445  Q
    ||||||||||  |||| | ||||||||||||||||||||||| ||||||    
T  3079692 atccaactcatcaatccccagatctttcttaatagtttctcttatagtt 3079740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 453
Target Start/End: Complemental strand, 11733937 - 11733885
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||| |||||||||||| |||||| |||||||||||  |||| ||||||||    
T  11733937 aactcattaatctctagatttttctttatagtttctcttgtagtatttctagg 11733885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 6e-29; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 308 - 501
Target Start/End: Original strand, 45289091 - 45289283
Alignment:
Q  308 acaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcag 407  Q
    |||| ||||||||| |||| || |||||||| |||| |||   ||| ||||||||   ||| |||||| ||||||||| | || |||||||||||||||     
T  45289091 acaacaacaaccaagccttatcccactaagtggggttggcgacatggatcaaattatgctataatgttctatcataaacc-atatttggatccaactcat 45289189  T
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||||||||| ||||||| ||||||||||||| ||||||||  |||   ||||||||| |||  | |||||||||||||||||||||||||||||    
T  45289190 taatctctaaatctttcctaatagtttctcttatagttttcatagatcttcctctatctcttgtaatctaactatcctccatctgatctactct 45289283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 392 - 546
Target Start/End: Original strand, 39600764 - 39600918
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatct 491  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||  ||||||||  |||    |||| ||||||||| ||||    
T  39600764 tttggatccaactcattaacctctaaatctttcttaatagtttctcttatagtttttctaggtcttcctctacctcttgcaatctgactatcctcgatct 39600863  T
Q  492 gatctactctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||||||||| || |||| | ||||| | |  ||||||| |||||| | ||||||    
T  39600864 gatctactctcctcgctacagaatctacaggtcttctctttacatgccaaaacca 39600918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 49042219 - 49042081
Alignment:
Q  308 acaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcag 407  Q
    |||| ||||||||| |||| |||||| |||| |||||||||  ||| |||||||| | | | | |||| ||||||||||| || |||||||||||||||     
T  49042219 acaacaacaaccaagccttatctcaccaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaaccatatttggatccaactcat 49042120  T
Q  408 taatctctagatctttcttaatagtttctctgatagttt 446  Q
    ||| ||||| ||||||| ||||||||||||| |||||||    
T  49042119 taacctctaaatctttcctaatagtttctcttatagttt 49042081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 304 - 546
Target Start/End: Complemental strand, 48508521 - 48508280
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | | | |||| ||||||||| | || |||| |||||||    
T  48508521 aacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaacc-atatttgaatccaac 48508423  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctac 503  Q
    ||| | | ||||| ||| ||  |||| |||||||| |||||||| |||||  ||||||||  |||  ||| || ||| |||||||||||||||||||| |    
T  48508422 tcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctcttttgacctgactctcctccatctgatctactcttc 48508323  T
Q  504 ttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    || | | |  |||| |||  |||||||||||||| ||||||||    
T  48508322 ttacgacaacatctacgggtcttctctctacatgcccaaacca 48508280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 398 - 546
Target Start/End: Original strand, 33755431 - 33755579
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    ||||||||| |||||||||  | |||| ||||||||||||| |||||||||||||| ||||||||   |||  |||||  || |||||||||||||||||    
T  33755431 tccaactcattaatctctaagtttttcctaatagtttctcttatagtttttctaggttttcctctgcctctagtgatccgaccatcctccatctgatcta 33755530  T
Q  498 ctctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||| ||   || | ||||| | | ||||| ||||||||||||||||||    
T  33755531 ctctcctaagtacaaaatctacaggccttcgctctacatgtccaaacca 33755579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 453
Target Start/End: Original strand, 36820067 - 36820121
Alignment:
Q  399 ccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  36820067 ccaactcattaatctctagatctttcttaatagtttctcttatagtttttctagg 36820121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 501
Target Start/End: Original strand, 42510012 - 42510208
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| |||| |||| |||| || | |||||| |||||||||  ||| |||||||| | | | ||||||  |||||||| | || ||| | ||||||    
T  42510012 aacaacaacaacagccaagccttttccctctaagtggggtcggctacatggatcaaattacgccataatgttcaatcataaacc-atattttggtccaac 42510110  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||| | || || | ||||||| |||| |||||||||||||||||||||||  ||||| |   |||  |||||| ||||||||||||||||||||||||    
T  42510111 tcatttatttccaaatctttcctaatggtttctctgatagtttttctaggtcttcctttgcctctagtgatctgactatcctccatctgatctactct 42510208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 307 - 503
Target Start/End: Complemental strand, 54128662 - 54128466
Alignment:
Q  307 aacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactca 406  Q
    ||||| ||||||||| |||| || |||||||| |||||| ||  ||| ||||||||   | | |||||| ||||||||| | || ||||| |||||||||    
T  54128662 aacaacaacaaccaagccttatcccactaagtggggtcgcctacatggatcaaattatgccataatgttctatcataaacc-atatttgggtccaactca 54128564  T
Q  407 gtaatctctagatctttcttaatagtttctctga-tagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctac 503  Q
     | | ||||| ||||||| | ||||||||||| | |||||||||||||  ||||||||  |||   ||||| |||| |||||||||||||||||||||    
T  54128563 ttgacctctaaatctttccttatagtttctcttaatagtttttctaggtcttcctctacctctttcgatctgactaacctccatctgatctactctac 54128466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 452
Target Start/End: Original strand, 46431767 - 46431822
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    |||||||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  46431767 atccaactcattaatctctagatcttttttaatagtttctcttatagtttttctag 46431822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 546
Target Start/End: Original strand, 37598258 - 37598406
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| |||||||||||| | |||||||||||||||| | ||||||||||||   || |||   |||| |||| ||||||  || ||||||||||    
T  37598258 atccaactcattaatctctagatatatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 37598356  T
Q  497 actctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    ||||| ||| ||| ||||||  || || |||||| |||||| ||||||||    
T  37598357 actcttcttactacataatccacgtacattctctatacatggccaaacca 37598406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 19162675 - 19162779
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| |||| ||| |||||  ||||||||  |||  ||| || ||| |||| ||||||||||    
T  19162675 atccaactcattaatctctaaatctttcctaatagtttctcttatagatttcctaggtcttcctctaactcttttgacctgactctccttcatctgatct 19162774  T
Q  497 actct 501  Q
    |||||    
T  19162775 actct 19162779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 514
Target Start/End: Original strand, 23534659 - 23534775
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    ||||||||| |||||||||  |||||| ||||||||||| | ||| ||||| | ||  ||||||||  |||  ||||||||||||| |||||||||||||    
T  23534659 tccaactcattaatctctaagtctttcctaatagtttctgttataatttttttgggtcttcctctacctctagtgatctaactatcatccatctgatcta 23534758  T
Q  498 ctctacttgctatataa 514  Q
    |||| ||| ||| ||||    
T  23534759 ctctccttactacataa 23534775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 44443292 - 44443396
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    ||||||||||  |||||||||||| ||||||| ||||||||| ||||||||||||||| ||| | | | | | ||||| |||||| |||||| |||| ||    
T  44443292 atccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctaggccttcatatgtctataatgatttaactaccctccaactgagct 44443391  T
Q  497 actct 501  Q
    |||||    
T  44443392 actct 44443396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 2340810 - 2340861
Alignment:
Q  402 actcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||| |||||    
T  2340810 actcattaatctctagatctttcttaatagtttctcttatagttttcctagg 2340861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 36304248 - 36304123
Alignment:
Q  308 acaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcag 407  Q
    |||| ||||||| | ||||||| || | ||| |||||||||  ||| |||||||| | | | |||||  ||||||||| | || ||| |||||||||||     
T  36304248 acaacaacaaccgagccttgtcacattgagtggggtcggctacatggatcaaattacgccataatgtcctatcataaacc-atattttgatccaactcat 36304150  T
Q  408 taatctctagatctttcttaatagttt 434  Q
    |||||||||||||||||||||||||||    
T  36304149 taatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 41452828 - 41452882
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    |||||||||| |||||||||||||||||||||||||||  || ||||||||||||    
T  41452828 atccaactcattaatctctagatctttcttaatagtttaacttatagtttttcta 41452882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 453
Target Start/End: Complemental strand, 11581635 - 11581582
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||| | |||| |||||||||||||||||||||||| ||||||||||||||    
T  11581635 caactcatttatctatagatctttcttaatagtttctcttatagtttttctagg 11581582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 21200742 - 21200677
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||| |||| ||||||||||||| |||||||| ||| ||||||||||||||  |||||||    
T  21200742 atccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtcttcctct 21200677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 453
Target Start/End: Original strand, 40116528 - 40116612
Alignment:
Q  368 acaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||| ||||||||| | || ||| | ||||||||| ||||||||| |||| || ||||||||||||| ||||||||||||||    
T  40116528 acaatgttctatcataaacc-atatttcggtccaactcattaatctctaaatctatcctaatagtttctcttatagtttttctagg 40116612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 501
Target Start/End: Original strand, 50960720 - 50960829
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatct 491  Q
    ||||||||||||||| ||||||||| | ||||| ||||||||||||| | | ||||||||||  |||||||   |||   ||||  ||| ||||||||||    
T  50960720 tttggatccaactcattaatctctaaacctttcctaatagtttctcttaaattttttctaggtcttcctctccctctttcgatccgactctcctccatct 50960819  T
Q  492 gatctactct 501  Q
    ||||||||||    
T  50960820 gatctactct 50960829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 40982090 - 40982034
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||| || |||| ||||||||||||||||||||| |||| ||||||||||||||    
T  40982090 atccaacacattaatatctagatctttcttaatagttactcttatagtttttctagg 40982034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 43308756 - 43308700
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||| | |||||||||||| ||||||||||||||||||  |||||||||||||    
T  43308756 atccaactgattaatctctagatttttcttaatagtttctcttgtagtttttctagg 43308700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 453
Target Start/End: Original strand, 19676079 - 19676225
Alignment:
Q  306 caacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactc 405  Q
    |||||| ||||||||| |||| || |||||||| ||||| |||  ||| |||||||  | | | |||| | ||||||| | | || ||||||||||||||    
T  19676079 caacaataacaaccaagccttatcccactaagtggggtcagctacatggatcaaatcacgccataatgctctatcatacagc-atatttggatccaactc 19676177  T
Q  406 agtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    | ||| ||||| || |||| ||||||||||||| | ||||||||||||    
T  19676178 attaacctctaaatttttcctaatagtttctcttacagtttttctagg 19676225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 26990406 - 26990351
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| | ||||||||||| ||||| ||||||||||| ||||||||||||||    
T  26990406 tccaactcattgatctctagatccttcttgatagtttctctaatagtttttctagg 26990351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 29475880 - 29475841
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttct 436  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  29475880 atccaactcattaatctctagatctttcttaatagtttct 29475841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 37351600 - 37351545
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||| |||| ||||||||||||||||||| || |||||||| ||||||||||||||    
T  37351600 tccatctcattaatctctagatctttcttgattgtttctctaatagtttttctagg 37351545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 501
Target Start/End: Complemental strand, 38431068 - 38430938
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctg 469  Q
    |||||| ||||||||| | || ||||||||||||||| ||| ||||| | ||| |  ||||||||||||  ||||||||||| |  ||||||||  |||     
T  38431068 aatgttctatcataaacc-atatttggatccaactcattaacctctaaaccttccacaatagtttctcttgtagtttttctaagtcttcctctacctctt 38430970  T
Q  470 atgatctaactatcctccatctgatctactct 501  Q
     |||| | ||| ||||||||||||||||||||    
T  38430969 ttgatttgactctcctccatctgatctactct 38430938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 431
Target Start/End: Complemental strand, 29601177 - 29601052
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| || |||||| || | || |||||||| ||||| |||  ||| |||||||| |   | |||||| ||||||||| |||| |||| ||||||||    
T  29601177 acaacaacaagaaccaagccgtatcccactaagtggggtcagctacatggatcaaattacatcataatgttctatcataaa-ctatatttgaatccaact 29601079  T
Q  405 cagtaatctctagatctttcttaatag 431  Q
    || ||||||||| ||||||||||||||    
T  29601078 cattaatctctaaatctttcttaatag 29601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 546
Target Start/End: Complemental strand, 39235333 - 39235183
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatc 495  Q
    ||||||||||| |||  |||| ||||||| ||||||||| ||  ||||||||| | ||  ||||||||  |||  |||||| ||| ||||||||||||||    
T  39235333 gatccaactcattaacttctaaatctttcctaatagtttatcctatagtttttttgggtcttcctctacctcttttgatctgactttcctccatctgatc 39235234  T
Q  496 tactctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||||| | | ||| |  |||| | |  |||||||||||||| ||||||||    
T  39235233 tactcttcgtactacaacatctacaggtcttctctctacatgcccaaacca 39235183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 410 - 459
Target Start/End: Complemental strand, 7278640 - 7278591
Alignment:
Q  410 atctctagatctttcttaatagtttctctgatagtttttctaggctttcc 459  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||| |||||    
T  7278640 atctctagatctttcgtaacagtttctcttatagtttttctaggttttcc 7278591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 27893282 - 27893217
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||||||||| |||||||||| || || |||||||||||||| ||||| ||||||||  ||||||||    
T  27893282 tccaactcattaatctctaggtcctttttaatagtttctcttatagtctttctaggtcttcctcta 27893217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 462
Target Start/End: Original strand, 31337657 - 31337708
Alignment:
Q  410 atctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||||||    
T  31337657 atctctagatctttctta-tagtttctgttatagtttttctaggttttcctct 31337708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 33307305 - 33307257
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagttttt 448  Q
    ||||||| |||||||||||||||||||||| ||||| || |||||||||    
T  33307305 caactcattaatctctagatctttcttaatggtttcccttatagttttt 33307257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 501
Target Start/End: Original strand, 48734259 - 48734327
Alignment:
Q  433 ttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    |||||| |||||||||| |||| ||||||||  |||  |||||||||||  ||||||||||||||||||    
T  48734259 ttctctaatagtttttcaaggccttcctctacctcttttgatctaactaatctccatctgatctactct 48734327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 49503565 - 49503695
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| ||||||||| |||| || ||||||||||||||||||  ||| |||||||| | | | ||| || ||||  ||||| || |||||| ||||||    
T  49503565 acaacaacaacaaccaagccttatcccactaagtagggtcggctacatggatcaaattacgccataatattatatc-caaaaccatatttggacccaact 49503663  T
Q  405 cagtaatctctagatctttcttaatagtttct 436  Q
    || ||| |  || ||||||| |||||||||||    
T  49503664 cattaaccgttaaatctttcctaatagtttct 49503695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 500
Target Start/End: Original strand, 31261051 - 31261132
Alignment:
Q  418 atctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactc 500  Q
    ||||||||| ||||||||||| ||||||||||||||  |||||||   |||  |||| | |||| ||||||||||||||||||    
T  31261051 atctttcttgatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgacta-cctccatctgatctactc 31261132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 452
Target Start/End: Original strand, 32052607 - 32052661
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    ||||||||| |||||| || ||||||| ||||||||| ||| |||||||||||||    
T  32052607 tccaactcattaatctataaatctttcctaatagtttatctcatagtttttctag 32052661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 438
Target Start/End: Complemental strand, 49841811 - 49841769
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||    
T  49841811 gatccaactcattaatctttagatctttgttaatagtttctct 49841769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 501
Target Start/End: Original strand, 54365085 - 54365167
Alignment:
Q  419 tctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    |||||| ||||||||||||| ||||||||||||||  |||||||   |||  || ||| |||||||| ||| |||||||||||    
T  54365085 tctttcctaatagtttctcttatagtttttctaggtcttcctctgcctctcgtggtctgactatccttcatttgatctactct 54365167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 40273201 - 40273258
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaat 361  Q
    |||||||| |||||||||||||| || |||||||| |||||||||  ||| |||||||    
T  40273201 aacaacaacaacaaccaaaccttttcccactaagtggggtcggctacatggatcaaat 40273258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 453
Target Start/End: Original strand, 45486935 - 45486996
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||| ||||| ||| ||||||| |  |||||| ||||||||||||| ||||||||||||||    
T  45486935 tttggttccaagtcattaatctcaaagtctttcataatagtttctcttatagtttttctagg 45486996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 53519866 - 53519809
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaat 361  Q
    |||||||| ||||||||| |||| ||||||||||| |||||||||  ||| |||||||    
T  53519866 aacaacaacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaat 53519809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 543
Target Start/End: Complemental strand, 2968387 - 2968259
Alignment:
Q  415 tagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatataa 514  Q
    ||||| |||||| ||||||| ||| ||||||||| | || ||||||| || |||  |||| | ||||  ||||||| |||| ||||| ||| ||| | ||    
T  2968387 tagatttttcttcatagtttttcttatagtttttatgggttttcctcaatatctagtgatttgactactctccatccgatcaactctccttactacaaaa 2968288  T
Q  515 tctccggaccttctctctacatgtccaaa 543  Q
    |||  ||| |||||||||||||| |||||    
T  2968287 tctatggatcttctctctacatgcccaaa 2968259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 450
Target Start/End: Original strand, 21427683 - 21427723
Alignment:
Q  410 atctctagatctttcttaatagtttctctgatagtttttct 450  Q
    |||||||| |||||||||||||||||||| ||| |||||||    
T  21427683 atctctaggtctttcttaatagtttctcttataatttttct 21427723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 45493780 - 45493836
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||| |||| ||| |||| |||||||||||||||||||| | ||||||| ||||||    
T  45493780 atccagctcattaacctctggatctttcttaatagtttcttttatagtttatctagg 45493836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 384 - 448
Target Start/End: Original strand, 48657403 - 48657467
Alignment:
Q  384 aaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagttttt 448  Q
    ||||||| ||| ||| ||||||| |||||| ||||| |||||||||||||| ||| ||| |||||    
T  48657403 aaactatatttcgatacaactcattaatctatagatttttcttaatagtttttcttataattttt 48657467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 306 - 546
Target Start/End: Original strand, 32404525 - 32404763
Alignment:
Q  306 caacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactc 405  Q
    |||||| ||||||||  |||| || |||||||| |||||||||  ||| |||||||| | | |  ||||| ||||||||| | ||||||||||  |||||    
T  32404525 caacaacaacaaccag-ccttatcccactaagtggggtcggctacatggatcaaattacgccattatgttatatcataaacc-atgtttggatttaactc 32404622  T
Q  406 agtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctactt 505  Q
    | ||||||||| ||||||| ||||||||||||| ||||||||| ||||  ||||||||  |||  |||| | ||||||||||||||  |||||||| |||    
T  32404623 attaatctctaaatctttcctaatagtttctcttatagtttttgtaggtcttcctctacctcttgtgatatgactatcctccatcttctctactctcctt 32404722  T
Q  506 gctatataatctccggaccttctctctacatgtccaaacca 546  Q
     ||||| ||||| | |  ||||||||||||| |||||||||    
T  32404723 actatagaatctacaggtcttctctctacatatccaaacca 32404763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 313 - 546
Target Start/End: Complemental strand, 40416648 - 40416416
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    |||| |||||||||  | |||||||| |||||||||  | | |||| ||| | | | |||||| ||||||||| | || ||| ||||||||||| |||||    
T  40416648 aacagccaaaccttaacccactaagtggggtcggctaaagggatcacattacaccataatgttctatcataaacc-atatttcgatccaactcattaatc 40416550  T
Q  413 tctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatat 512  Q
    | |||||||||||||||||||| ||| ||||||||||||||  ||| ||| | | || |||||| |||||||| ||||||||||||||| ||| ||| |     
T  40416549 tatagatctttcttaatagtttgtcttatagtttttctaggtcttcttctgtctttggtgatctgactatcctgcatctgatctactctccttactacaa 40416450  T
Q  513 aatctccggaccttctctctacatgtccaaacca 546  Q
    ||||| | |  |||||||||||||| | ||||||    
T  40416449 aatctacagttcttctctctacatgcctaaacca 40416416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 546
Target Start/End: Complemental strand, 42501302 - 42501153
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| |||||| |||||||||||||||| ||||||| |||||||||||||| |||||||||  ||| ||||| | |||| ||||||||||| ||    
T  42501302 atccaactcattaatctatagatctttcttaataatttctcttatagtttttctaggttttcctctacctctaatgatttgactaccctccatctgaact 42501203  T
Q  497 actctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    ||||| ||| ||| | ||||  |||  ||  |||||||||||||||||||    
T  42501202 actctcctttctacagaatccacgggtctcttctctacatgtccaaacca 42501153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 501
Target Start/End: Original strand, 52561594 - 52561781
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | | |||||| || |  ||| | || ||||||||||||||| ||| |    
T  52561594 aacaaccaagccttatcccactaagtggggtcggctacatggatcaaatttcgccataatgttctacccgaaacc-atatttggatccaactcattaacc 52561692  T
Q  413 tctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    |||| ||||||| ||| ||||||||| |||||||||||| |  ||||||||  |||  | |||||||| ||||||||||||||||||||    
T  52561693 tctaaatctttcctaacagtttctcttatagtttttctaagtcttcctctacctcttctaatctaactctcctccatctgatctactct 52561781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 305 - 453
Target Start/End: Complemental strand, 41560514 - 41560367
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | | |||||| ||||||||  | || |||||||||||||    
T  41560514 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaccc-atatttggatccaact 41560416  T
Q  405 cagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    || ||||||||| || | || ||||||||||||| |||| |||||||||    
T  41560415 cattaatctctaaatgtatcctaatagtttctcttatagcttttctagg 41560367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 394 - 501
Target Start/End: Original strand, 9599479 - 9599586
Alignment:
Q  394 tggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctga 493  Q
    |||||| |||||| ||| ||||| || |||| |||||||||||||  |||||||||||||  ||||||||  ||| ||||||| ||| ||||||||||||    
T  9599479 tggatcaaactcattaaactctaaatatttcctaatagtttctcttgtagtttttctaggtcttcctctacctcttatgatctgactctcctccatctga 9599578  T
Q  494 tctactct 501  Q
    ||||||||    
T  9599579 tctactct 9599586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 546
Target Start/End: Complemental strand, 2544761 - 2544644
Alignment:
Q  428 atagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatataatctccggaccttc 527  Q
    ||||||||||||||||||||||||||  ||||||||  |||  || | | |||||||||||||||||||||||| ||| ||||| |||||   |  ||||    
T  2544761 atagtttctctgatagtttttctaggtcttcctctacctctagtgtt-tgactatcctccatctgatctactctccttactatagaatctataggtcttc 2544663  T
Q  528 tctctacatgtccaaacca 546  Q
    |||||||||||||||||||    
T  2544662 tctctacatgtccaaacca 2544644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 501
Target Start/End: Complemental strand, 8796492 - 8796299
Alignment:
Q  307 aacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactca 406  Q
    ||||| ||||||||| |||| || |||||||| |||||||||  ||| || ||||| | | | |||||| ||||||||| | || |||  |||||| |||    
T  8796492 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaacc-atatttcaatccaagtca 8796394  T
Q  407 gtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
     |||| |||||||||||||||||||||||||| | ||||||| | ||  |||||||   |||  |||||| ||||||||||||| ||| ||||||    
T  8796393 ttaatatctagatctttcttaatagtttctcttaaagtttttattggtcttcctctgcctctagtgatctgactatcctccatccgatttactct 8796299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 29577229 - 29577330
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatc 495  Q
    |||||| |||| ||||||||||||||||||||||||||| | |  |||||||||||||  ||||||||  |||  |||||| |||||| |||||||||||    
T  29577229 gatccagctcattaatctctagatctttcttaatagtttatgttgtagtttttctaggtcttcctctacctctagtgatcttactatcttccatctgatc 29577328  T
Q  496 ta 497  Q
    ||    
T  29577329 ta 29577330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 489
Target Start/End: Complemental strand, 26299283 - 26299187
Alignment:
Q  393 ttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccat 489  Q
    ||||| |||||||| ||| ||||| ||||||| ||||||||||||| |||||||| ||||| |||||||||  |||| | |||| ||||||||||||    
T  26299283 ttggacccaactcattaacctctaaatctttcataatagtttctcttatagttttcctaggttttcctctacctctggtaatctgactatcctccat 26299187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 8203223 - 8203278
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  8203223 tccaactcattaatctctagatcttttttaatagtttctcttatagtttttctagg 8203278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 8342969 - 8343036
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctat 464  Q
    |||||||||| |||||||||||||||| ||||| |||||||| ||||||||||||||  |||||||||    
T  8342969 atccaactcattaatctctagatctttattaattgtttctcttatagtttttctaggtcttcctctat 8343036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 19969301 - 19969356
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  19969301 tccaactcattaatctctagatctttgttaatagtttctcttatagtttttctagg 19969356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 544
Target Start/End: Complemental strand, 46388570 - 46388423
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    ||||||||||  |||||||||||| ||||||| ||||||||| ||||||||||||||| ||| | | | | | ||||| |||||| |||||| |||| ||    
T  46388570 atccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctaggccttcatatgtctataatgatttaactaccctccaactgagct 46388471  T
Q  497 actctacttgctatataatctccggaccttctctctacatgtccaaac 544  Q
    ||||| ||| ||| | ||||| |    ||||||||||||||| |||||    
T  46388470 actctccttactacagaatctacaagtcttctctctacatgtgcaaac 46388423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 544
Target Start/End: Complemental strand, 46395014 - 46394867
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    ||||||||||  |||||||||||| ||||||| ||||||||| ||||||||||||||| ||| | | | | | ||||| |||||| |||||| |||| ||    
T  46395014 atccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctaggccttcatatgtctataatgatttaactaccctccaactgagct 46394915  T
Q  497 actctacttgctatataatctccggaccttctctctacatgtccaaac 544  Q
    ||||| ||| ||| | ||||| |    ||||||||||||||| |||||    
T  46394914 actctccttactacagaatctacaagtcttctctctacatgtgcaaac 46394867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 501
Target Start/End: Original strand, 3818947 - 3819048
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctact 499  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||||||||| |||  ||||||| | |||  || | | | || |||||||||||||||||    
T  3818947 caactcattaatctctaaatctttcttaatagtttctcttatagtttttcaaggtcttcctctttctctagtggtttgattaccctccatctgatctact 3819046  T
Q  500 ct 501  Q
    ||    
T  3819047 ct 3819048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 30834065 - 30834130
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||| |||||||||  |||||||    
T  30834065 atccaactcattaatctctagatctttcgtaatagtttctcttatagcttttctaggtcttcctct 30834130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 495
Target Start/End: Original strand, 36339912 - 36339989
Alignment:
Q  418 atctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatc 495  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||  |||  |||||||  ||||||||||||||||    
T  36339912 atctttcctaatagtttctctgatagtttttctaggtcttcctctacctctagtgatctaggtatcctccatctgatc 36339989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 546
Target Start/End: Complemental strand, 38869076 - 38868927
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    ||||||| || ||||| ||||||||||||||||| ||||||| ||||||||||||||  ||| |||   ||| ||||| | |||| ||||||||| ||||    
T  38869076 atccaacccattaatcgctagatctttcttaataatttctcttatagtttttctaggtcttcttctgcctctaatgatttgactaccctccatctaatct 38868977  T
Q  497 actctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    ||||| || |||| | ||||| |     ||||||||||||| ||||||||    
T  38868976 actctcctcgctagagaatctactagtgttctctctacatgcccaaacca 38868927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 546
Target Start/End: Complemental strand, 43423913 - 43423764
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| |||||||||||||||||||||| || |||||  || ||||||||||  ||||||||  |||  |||| | ||||   |||||||  |||    
T  43423913 atccaactcactaatctctagatctttcttaatggtctctcttgtaatttttctaggtcttcctctacctctagtgatttgactactatccatctagtct 43423814  T
Q  497 actctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    ||||||||| ||| ||||||| |    |||||||||||||| ||||||||    
T  43423813 actctacttactacataatctacaagtcttctctctacatggccaaacca 43423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 438
Target Start/End: Original strand, 52532621 - 52532745
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    ||||||||| |||| || |||||||| |||||||||  |||||||||||| | | | |||||| |||||| |||| || ||| | ||||||||| ||||     
T  52532621 aacaaccaagccttttcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatcat-aaaccatattttgttccaactcattaatt 52532719  T
Q  413 tctagatctttcttaatagtttctct 438  Q
    |||| ||||||| |||||||||||||    
T  52532720 tctaaatctttcctaatagtttctct 52532745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 501
Target Start/End: Complemental strand, 6025799 - 6025695
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| |||||||||||||||| ||| |||| ||||| ||||||||||||||  |||||||   |||  |||| | |||| ||| ||||||||||    
T  6025799 atccaactcattaatctctagatcttttttactagtatctcttatagtttttctaggtcttcctctgcctctagtgatttgactaccctacatctgatct 6025700  T
Q  497 actct 501  Q
    |||||    
T  6025699 actct 6025695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 12231559 - 12231505
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    |||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  12231559 atccaactcattaatctcgagatctttcttaatagtctctcttatagtttttcta 12231505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 453
Target Start/End: Complemental strand, 29129058 - 29128921
Alignment:
Q  316 aaccaaaccttgtctcactaagtagggtcggctgtatga-atcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctc 414  Q
    |||||| |||| ||||||||||| |||||||||  |||  |||| ||| | | | |||||| ||||||||| | || |||||||||||||   ||| |||    
T  29129058 aaccaagccttatctcactaagtggggtcggctacatgggatcatattacaccataatgttctatcataaacc-atatttggatccaacttgttaacctc 29128960  T
Q  415 tagatctttcttaatagtttctctgatagtttttctagg 453  Q
    || ||||||| ||||||||||||| ||||||||||||||    
T  29128959 taaatctttcctaatagtttctcttatagtttttctagg 29128921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 546
Target Start/End: Original strand, 48431506 - 48431643
Alignment:
Q  409 aatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgct 508  Q
    |||||||| ||||||||||||||||||||| ||||||||| | ||  ||||||||  |||  | |||  |||||||||||||||||| |||||  || ||    
T  48431506 aatctctaaatctttcttaatagtttctcttatagtttttttgggtcttcctctacctcttgtaatccgactatcctccatctgatcaactctctttact 48431605  T
Q  509 atataatctccggaccttctctctacatgtccaaacca 546  Q
    | | ||||| |    |||||||||||||| ||||||||    
T  48431606 acaaaatctacaagtcttctctctacatgcccaaacca 48431643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 34444642 - 34444531
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || |||||||| |||||||||  ||  |||||||| | | | |||||||||| ||||| | || ||||||||||||    
T  34444642 aacaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacaccataatgttttattataaacc-atatttggatccaac 34444544  T
Q  404 tcagtaatctcta 416  Q
    ||| |||||||||    
T  34444543 tcattaatctcta 34444531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 447
Target Start/End: Original strand, 990545 - 990596
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttt 447  Q
    ||||||||||| |||||||||||||| ||| |||||||||||| ||||||||    
T  990545 gatccaactcattaatctctagatctatctcaatagtttctctaatagtttt 990596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 461
Target Start/End: Original strand, 8676954 - 8677017
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctc 461  Q
    ||||||||| ||||||||| |||||| |||||||||||||| |||| ||| ||||| |||||||    
T  8676954 tccaactcattaatctctaaatcttttttaatagtttctcttatagatttcctaggttttcctc 8677017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 28528548 - 28528493
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| ||||||||||||| ||||||||||||||| | ||||||||| ||||    
T  28528548 tccaactcattaatctctagatccttcttaatagtttctgttatagtttttttagg 28528493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 356
Target Start/End: Complemental strand, 14224368 - 14224318
Alignment:
Q  306 caacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaat 356  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||| ||||||    
T  14224368 caacaacaacaaccaatccttgtcccactaagtagggtcggctgcatgaat 14224318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 546
Target Start/End: Original strand, 25979227 - 25979468
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || |||||||| |||||||||  ||| |||||||  | | | | |||| ||||||||| | || ||||||||||||    
T  25979227 aacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaacc-atatttggatccaac 25979325  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctac 503  Q
    ||| | | ||||| ||| ||  |||| |||||||| ||||||||  | ||  ||||||||  |||  | | || ||| ||||||||  |||||||||| |    
T  25979326 tcattgacctctaaatcctttctaatggtttctctaatagttttcatgggtcttcctctacctcttttaacctgactctcctccattcgatctactctcc 25979425  T
Q  504 ttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    || | | |  |||| |||  |||||||||||||||||||||||    
T  25979426 ttacaacagcatctacgggtcttctctctacatgtccaaacca 25979468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 853873 - 853938
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||| ||||||||||||| ||||||||||||||||  |||| |||| ||||  |||||||    
T  853873 atccaactcactaatctctagatccttcttaatagtttctcgtatagattttttaggtcttcctct 853938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 6299485 - 6299542
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttc 458  Q
    |||||| ||||||||||||||||||||| | ||||||| ||| |||||||| ||||||    
T  6299485 aactcattaatctctagatctttcttaacaatttctcttataatttttctaagctttc 6299542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 33560946 - 33561011
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||  ||||||||||||||| |||||||||||| || | ||||||||||||  |||||||    
T  33560946 atccaactcgctaatctctagatcttacttaatagtttcccttacagtttttctaggacttcctct 33561011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 501
Target Start/End: Complemental strand, 478872 - 478768
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| ||| ||||| | ||||| ||||||||||||| |||| |||| ||||  ||||||||  |||  ||| |||||| || | ||||||||||    
T  478872 atccaactcattaacctctaaaactttcctaatagtttctcttatagattttgtaggtcttcctctaactcttttgacctaactctctttcatctgatct 478773  T
Q  497 actct 501  Q
    |||||    
T  478772 actct 478768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 9509491 - 9509407
Alignment:
Q  418 atctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactcta 502  Q
    ||||||| ||||||||| ||| ||||||||||||||  ||||||||  |||  | || | ||| |||||||||||||||||||||    
T  9509491 atctttcctaatagtttatcttatagtttttctaggtcttcctctacctcttctaatatgactctcctccatctgatctactcta 9509407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 12135901 - 12135861
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctc 437  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  12135901 atccaactcattaatctctagatttttcttaatagtttctc 12135861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 453
Target Start/End: Complemental strand, 26016627 - 26016575
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||| | ||||||||||| ||| ||||||||||||| ||||||||||||||    
T  26016627 aactcatttatctctagatcattcctaatagtttctcttatagtttttctagg 26016575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 501
Target Start/End: Original strand, 38807668 - 38807863
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| ||||||||| |||| || |||||||| |||||||||  ||| | |||||| | | | | |||| ||||||||| | || |||||||||||||    
T  38807668 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggaacaaattacgccatagtgttctatcataaacc-atatttggatccaact 38807766  T
Q  405 cagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    |  | | ||||| ||| ||  |||| |||||||| ||||||||  ||||  |||| |||  |||  |||||| ||| ||||||||||| ||||||||    
T  38807767 cgttgacctctaaatcctttctaatggtttctcttatagttttcttaggtcttcccctagctcttttgatctgactctcctccatctggtctactct 38807863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 39140792 - 39140669
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    ||||||||| | || || |||||||| |||||||||  |||||||||||| | | | |||||| |||| | |||| || ||||||||||||| | ||| |    
T  39140792 aacaaccaagcattatcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatc-tgaaaccatatttggatccaactaattaacc 39140694  T
Q  413 tctagatctttcttaatagtttctc 437  Q
    |||| || |||| ||||||||||||    
T  39140693 tctaaatttttcctaatagtttctc 39140669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 516
Target Start/End: Complemental strand, 43898425 - 43898304
Alignment:
Q  398 tccaactcagtaatctctagatctttctt---aatagtttctctgatagtttttctagg-ctttcctctatttctgatgatctaactatcctccatctga 493  Q
    ||||||||| ||||||||||||| |||||   |||||||||||| |||||||||| ||| |||||| |||  | || |||| | |||  |||||||||||    
T  43898425 tccaactcattaatctctagatccttcttctaaatagtttctcttatagtttttccaggtctttcc-ctacctttggtgatttgactcccctccatctga 43898327  T
Q  494 tctactctacttgctatataatc 516  Q
    |||||||| ||| ||| ||||||    
T  43898326 tctactctccttactacataatc 43898304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 7083083 - 7083028
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| |||||||||| ||  |||||||||||||||| |||| |||||||||    
T  7083083 tccaactcattaatctctagttccatcttaatagtttctcttatagcttttctagg 7083028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 463
Target Start/End: Complemental strand, 8628237 - 8628158
Alignment:
Q  384 aaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||||||| ||| |||| || ||| ||| ||||| ||||||| ||||||||||| | ||||||||||||||  ||||||||    
T  8628237 aaactatattttgatcaaattcattaacctctaaatctttcctaatagtttctgttatagtttttctaggtcttcctcta 8628158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 451
Target Start/End: Original strand, 39515955 - 39516010
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    ||||||||||| |||| ||||| | |||||||||||||||||  ||||||||||||    
T  39515955 gatccaactcattaatttctaggtttttcttaatagtttctcgtatagtttttcta 39516010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 50771645 - 50771700
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||| | |||||||||| || |||||||||||||| || ||||||||||||||    
T  50771645 tccaacttattaatctctaggtccttcttaatagtttcgcttatagtttttctagg 50771700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 448
Target Start/End: Original strand, 27520269 - 27520346
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagttttt 448  Q
    |||||| ||||||||| | || |||||||||| |||| ||||||||| || |||  ||||||||||||| |||||||||    
T  27520269 aatgttctatcataaatc-atatttggatccagctcattaatctctaaattttttctaatagtttctcttatagttttt 27520346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 27704118 - 27704055
Alignment:
Q  481 atcctccatctgatctactctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    ||||||||||||||||||||| ||||||| |||||||   |  ||| |||||||||||||||||||    
T  27704118 atcctccatctgatctactctccttgctacataatct--aggtcttttctctacatgtccaaacca 27704055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 453
Target Start/End: Original strand, 28511824 - 28511945
Alignment:
Q  331 cactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaata 430  Q
    |||||||| |||||||||  ||  |||||||| | | | |||||| ||||||||| | |||||| | ||||||||| ||||||| |  |||||| || ||    
T  28511824 cactaagtggggtcggctacattgatcaaattacgccataatgttctatcataaacc-atgttttggtccaactcattaatctccaagtctttcctagta 28511922  T
Q  431 gtttctctgatagtttttctagg 453  Q
     ||||||| ||||||||||||||    
T  28511923 atttctctaatagtttttctagg 28511945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 30445305 - 30445251
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    |||||||||| |||||||||||||  |||| ||||||||||| || |||||||||    
T  30445305 atccaactcattaatctctagatccctcttgatagtttctcttatcgtttttcta 30445251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 425
Target Start/End: Complemental strand, 5338999 - 5338879
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||| | |||| |||||||||||  ||| ||||  ||| |||||||| | | | |||||| ||| ||||| | |  ||| ||||||||    
T  5338999 aacaacaacaacaaccgagccttatctcactaagtgaggttggctacatggatcaaattacgccataatgttctataataaatc-acatttcgatccaac 5338901  T
Q  404 tcagtaatctctagatctttct 425  Q
    ||| ||||||||||||||||||    
T  5338900 tcattaatctctagatctttct 5338879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 453
Target Start/End: Original strand, 7762524 - 7762581
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||||| |||  |||| ||||||  ||||||||||||| ||||||||||||||    
T  7762524 gatccaactcattaacatctaaatcttttctaatagtttctcttatagtttttctagg 7762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 453
Target Start/End: Original strand, 11941667 - 11941724
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||||| ||||||||| ||||||  |||||| |||||| || |||||||||||    
T  11941667 gatccaactcaataatctctaaatcttttctaatagcttctcttattgtttttctagg 11941724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 15577612 - 15577571
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    |||||||||| ||||||||| ||| |||||||||||||||||    
T  15577612 atccaactcattaatctctatatccttcttaatagtttctct 15577571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 501
Target Start/End: Original strand, 37462881 - 37463068
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | | |||||| ||| ||||| | || |||| ||| |||||| ||| |    
T  37462881 aacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatgataaacc-atatttg-atcaaactcattaacc 37462978  T
Q  413 tctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttc-tgatgatctaactatcctccatctgatctactct 501  Q
    |||| ||| ||| | || |||||||| ||||||||||||||   |||||||  || |  |||||  ||| ||||||||||||||||||||    
T  37462979 tctaaatcattcctgatcgtttctcttatagtttttctaggtaatcctctacctctttttgatccgactctcctccatctgatctactct 37463068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 501
Target Start/End: Complemental strand, 39318414 - 39318219
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||| ||| |||| || |||||||  |||||||||  ||| |||||||| | | | | |||| ||||||||| | || ||||||||||||    
T  39318414 aacaacaacaacaaacaagccttatcccactaagc-gggtcggctacatggatcaaattacgccatagtgttctatcataaacc-atatttggatccaac 39318317  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||| | | ||||| ||| ||  |||| |||||||| |||||||| |||||  ||||||||  |||  ||| |  ||| ||||||||||||||| ||||    
T  39318316 tcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctcttttgacccgactctcctccatctgatctgctct 39318219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 44008773 - 44008708
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||| | ||||||||||||||||  ||||||||||| | | ||||||||||  |||||||    
T  44008773 atccaactcattgatctctagatctttctcgatagtttctcttagattttttctaggtcttcctct 44008708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 436
Target Start/End: Original strand, 10569170 - 10569198
Alignment:
Q  408 taatctctagatctttcttaatagtttct 436  Q
    |||||||||||||||||||||||||||||    
T  10569170 taatctctagatctttcttaatagtttct 10569198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 434
Target Start/End: Original strand, 10584986 - 10585022
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagttt 434  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  10584986 tccaactcattaatctctggatctttcttaatagttt 10585022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 17815661 - 17815617
Alignment:
Q  409 aatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||| |||||||||||| |||||||||||| ||| ||||||||||    
T  17815661 aatcactagatctttctaaatagtttctcttataatttttctagg 17815617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 437
Target Start/End: Original strand, 37311752 - 37311883
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| ||||||||| |||| || |||||||| |||||||||  ||| |||||||  | | | | |||| ||||| ||||| || |||||||||||||    
T  37311752 acaacaacaacaaccaagccttttcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca-aaaaccatatttggatccaact 37311850  T
Q  405 cagtaatctctagatctttcttaatagtttctc 437  Q
    || | | ||||| ||||||  |||| |||||||    
T  37311851 cattgacctctaaatcttttctaatggtttctc 37311883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 37430416 - 37430472
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaa 360  Q
    |||||||| ||||||||| |||| ||||||||||| || |||||| |||| ||||||    
T  37430416 aacaacaacaacaaccaagccttatctcactaagtgggatcggctatatggatcaaa 37430472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 43367704 - 43367772
Alignment:
Q  383 aaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    |||||||| |||  || ||||||| |||||| ||||||||| || ||||||||| | ||||||||||||    
T  43367704 aaaactatatttttattcaactcattaatctttagatctttgttgatagtttcttttatagtttttcta 43367772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 52442602 - 52442682
Alignment:
Q  383 aaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    |||||||||| |  |||||||||| |||  |||||||| ||||| ||||||||||| ||| || |||||||  ||||||||    
T  52442602 aaaactatgtctttatccaactcattaacatctagatccttcttgatagtttctcttatatttgttctaggtcttcctcta 52442682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 313 - 546
Target Start/End: Original strand, 28627938 - 28628170
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    |||||| || |||| || |||||||| | |||||||  ||| |||||||| | | | |||||| ||||||||| | |  |||| |||||||||| |||||    
T  28627938 aacaactaagccttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatcataaacc-acatttgcatccaactcattaatc 28628036  T
Q  413 tctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatat 512  Q
    |||| ||||||| ||||||||||||| ||||||||||||||  ||||||||  |||  |||| | ||||||||||||| |||||||||| ||| ||| ||    
T  28628037 tctaaatctttcctaatagtttctcttatagtttttctaggtcttcctctacctcttgtgatttgactatcctccatcggatctactctccttactacat 28628136  T
Q  513 aatctccggaccttctctctacatgtccaaacca 546  Q
    ||||| | |   |||||| |||||| ||||||||    
T  28628137 aatctacaggttttctctttacatgcccaaacca 28628170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 304 - 546
Target Start/End: Original strand, 38135209 - 38135449
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| ||||||| ||| |||| ||||| |||  ||| |||||||| | | | ||| || ||||||||  | || ||| | ||||||    
T  38135209 aacaacaataacaaccaagccttgtcccaccaagtggggtcagctagatggatcaaattacgccataatattctatcataaccc-atatttcggtccaac 38135307  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctac 503  Q
    ||| ||||||||| |||||| |||||||||||||| ||| ||||||||||  ||| |||   ||| ||||||| |||||||||||||||||||| ||| |    
T  38135308 tcattaatctctaaatcttttttaatagtttctcttatactttttctaggtcttcatctgcctctaatgatctgactatcctccatctgatcta-tctcc 38135406  T
Q  504 ttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    || ||| | ||||| | |  ||||| |||||||||||||||||    
T  38135407 ttactacaaaatctactggtcttctgtctacatgtccaaacca 38135449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 354 - 501
Target Start/End: Complemental strand, 36137000 - 36136854
Alignment:
Q  354 aatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| ||||| |||||| ||||||||| | || ||||||||||| ||| |||  |||| |||||||  |||||||||||| ||||||||||||||    
T  36137000 aatcaaattaccctataatgttctatcataaacc-atatttggatccaattcattaacatctaaatctttccaaatagtttctcttatagtttttctagg 36136902  T
Q  454 ctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
      |||||||| ||||  |||||| ||| ||||||||||||||| ||||    
T  36136901 tcttcctctacttcttctgatctgactctcctccatctgatctgctct 36136854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 501
Target Start/End: Complemental strand, 1569236 - 1569106
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctg 469  Q
    |||||| ||||||||| | || ||| ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||  | |||||   |||     
T  1569236 aatgttctatcataaacc-atattttgatccaactcattaatctctagatctttcttaatagttactcttatagtttttctaggactacctctgcctcta 1569138  T
Q  470 atgatctaactatcctccatctgatctactct 501  Q
       |||| ||||||||||||||||||||||||    
T  1569137 gcaatctgactatcctccatctgatctactct 1569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 304 - 434
Target Start/End: Original strand, 27893559 - 27893688
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || ||||||||||||||||||  ||||||||||||   | | |||||| ||||||||||| || ||| | |||| |    
T  27893559 aacaacaacaacaaccaagccttatcgcactaagtagggtcggctacatgaatcaaattatgccataatgttctatcataaaac-atatttcggtccagc 27893657  T
Q  404 tcagtaatctctagatctttcttaatagttt 434  Q
    ||| ||||||||| |||||||||||||||||    
T  27893658 tcattaatctctaaatctttcttaatagttt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 370 - 497
Target Start/End: Original strand, 28562427 - 28562554
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctg 469  Q
    |||||| ||||||||||| || || |||||||||||  ||||||||| ||||||| ||||||||||||| ||| ||||||||||   |||||||  |||     
T  28562427 aatgttatatcataaaaccatattaggatccaactcgttaatctctaaatctttcataatagtttctcttatattttttctaggtcatcctctacctctt 28562526  T
Q  470 atgatctaactatcctccatctgatcta 497  Q
     | |||||||||| ||| ||||||||||    
T  28562527 gtaatctaactattctctatctgatcta 28562554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 45601671 - 45601604
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||    
T  45601671 gatccaactcattaatctctagatctttcttaatggtttctcttatagtttttctaggtcttcctcta 45601604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 308 - 463
Target Start/End: Original strand, 40979928 - 40980082
Alignment:
Q  308 acaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcag 407  Q
    |||| ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | | | |||| ||||||||| | || |||||||||||||||     
T  40979928 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaacc-atatttggatccaactcat 40980026  T
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    | | ||||| ||||||  ||||||||||||| |||||||| |||||  ||||||||    
T  40980027 tgacctctaaatcttttctaatagtttctcttatagttttcctaggtcttcctcta 40980082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 9210700 - 9210848
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| |||||| || |||| || |||||||| ||||| |||  ||| |||||||| | | | |||||| ||||||||| | || ||||||||||||    
T  9210700 aacaacaacaacaacgaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgttgtatcataaacc-atatttggatccaac 9210798  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||| ||| ||||| || |||| ||| ||||||||| |||||||| |||||    
T  9210799 tcattaacctctaaatttttcctaaaagtttctcttatagttttcctagg 9210848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 24549776 - 24549824
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtt 445  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  24549776 atccaactcattaatctctagatctttcttaatagtttctcttatagtt 24549824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 30144969 - 30144913
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||    
T  30144969 atccaactcattaatctctagatctttcttaatagtttctcgaatagtttttatagg 30144913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 30664763 - 30664707
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    ||||||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  30664763 gatccaactcattaatctctagatctttcttaatagtttcttttatagtctttctag 30664707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 489
Target Start/End: Original strand, 30814771 - 30814851
Alignment:
Q  409 aatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccat 489  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||  |||||||   |||  |||||| ||||||||||||    
T  30814771 aatctctagatctttcttaatagtttctcttatagtgtttctaggtcttcctctgcctctagtgatctgactatcctccat 30814851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 21517442 - 21517524
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||| ||||||||| | || ||||||||||||| | ||||||||| || ||| |||||||||||||| ||||||||||||||    
T  21517442 aatgttatatcataaatc-atatttggatccaacttattaatctctaaatattttttaatagtttctcttatagtttttctagg 21517524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 37976455 - 37976373
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||| ||||||||| | || ||||||||||||||| ||||||||| ||||||| || ||||||| || ||||||||||||||    
T  37976455 aatgttctatcataaacc-atatttggatccaactcattaatctctaaatctttcatattagtttcacttatagtttttctagg 37976373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 12966210 - 12966144
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    |||||| ||| ||||||||| || |||||||||||||||||| ||||||||||||||  ||||||||    
T  12966210 atccaaatcattaatctctaaatatttcttaatagtttctcttatagtttttctaggtcttcctcta 12966144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 28858239 - 28858185
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    |||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||    
T  28858239 atccaacttattaatctctagatctttcttaatagtttgtcttatagtttttcta 28858185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 546
Target Start/End: Original strand, 2885719 - 2885959
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | | | |||| ||||||||| | || ||||| |||||||    
T  2885719 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccatagtgttctatcataaacc-atatttgggtccaact 2885817  T
Q  405 cagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctact 504  Q
    || | | | ||| ||| ||  |||| |||||||| |||||||| |||||  ||| ||||  |||  ||| || ||| |||||||||||||||||||| |     
T  2885818 cattgaccactaaatcatttctaatggtttctcttatagttttcctaggtcttcttctacctcttttgacctgactctcctccatctgatctactcttcg 2885917  T
Q  505 tgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    | | |    |||| |||| |||||||||||||| ||||||||    
T  2885918 tacaacggcatctacggatcttctctctacatgcccaaacca 2885959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 29653638 - 29653687
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttttct 450  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||||    
T  29653638 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 29653687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 451
Target Start/End: Original strand, 36239858 - 36239938
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    |||||| ||||||||| | || ||||||||||||||  ||||||||| || |||| ||||||||||||| ||||||||||||    
T  36239858 aatgttctatcataaagc-atatttggatccaactcgttaatctctaaatttttcctaatagtttctcttatagtttttcta 36239938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 546
Target Start/End: Complemental strand, 43281959 - 43281719
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||  ||| |||||||  | | | | |||| ||||| ||||| || |||||||||||||    
T  43281959 acaacaacaacaaccaagccttgtcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca-aaaaccatatttggatccaact 43281861  T
Q  405 cagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctact 504  Q
    || | | ||||| ||||||  |||| |||||||  || |||||  ||||  ||||||||  |||  | | || ||| |||||||| ||||||||||| ||    
T  43281860 cattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttct 43281761  T
Q  505 tgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    | | |    |||| |||  |||||||||||||||||||||||    
T  43281760 tacaacggcatctacgggtcttctctctacatgtccaaacca 43281719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 3457581 - 3457499
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||||||||||| | || ||| ||||||||||| |||||| | ||||||||| | |||||| ||| ||||||||||||||    
T  3457581 aatgttttatcataaa-caatattttgatccaactcattaatctttcgatctttctaattagtttttcttatagtttttctagg 3457499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 41461293 - 41461242
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagttttt 448  Q
    |||||||||| ||||| |||||||||| |||||||||||||| |||||||||    
T  41461293 atccaactcattaatcactagatctttattaatagtttctcttatagttttt 41461242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 501
Target Start/End: Complemental strand, 47848893 - 47848764
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctg 469  Q
    |||||| ||||||||| | || |||||||||| |||| ||||| | | |||||||  |||||||||||| |||||||||||||   |||||||   |||     
T  47848893 aatgttctatcataaacc-atatttggatccagctcattaatccccaaatctttcc-aatagtttctcttatagtttttctagttcttcctctgcctcta 47848796  T
Q  470 atgatctaactatcctccatctgatctactct 501  Q
     |||||  ||||||||||||||||||||||||    
T  47848795 gtgatcagactatcctccatctgatctactct 47848764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 462
Target Start/End: Complemental strand, 22174183 - 22174129
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||||||||| || ||||||||||| |||||||||||| | ||||||||    
T  22174183 taatctctagatctttgtttatagtttctcttatagtttttctacgttttcctct 22174129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 40830393 - 40830331
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    ||||||| |||| |||||||| ||||||||||||||||| |||| |||||||||  |||||||    
T  40830393 caactcattaatttctagatccttcttaatagtttctcttatagattttctaggtcttcctct 40830331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 453
Target Start/End: Complemental strand, 43282050 - 43281969
Alignment:
Q  371 atgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||| ||||||| | || ||| ||||||||||| ||||||||||||||| |||||| |||||||| |  |||||||||||    
T  43282050 atgttttgtcataaacc-atattttgatccaactcattaatctctagatcttacttaattgtttctcttacggtttttctagg 43281969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 440 - 501
Target Start/End: Original strand, 27893682 - 27893743
Alignment:
Q  440 atagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||||||||||||||  ||||||||| |||  |||||| | ||||||||||||||||||||||    
T  27893682 atagtttttctaggacttcctctatctctagtgatctgaatatcctccatctgatctactct 27893743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 42187726 - 42187584
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaa-tgttttatcataaaactatgtttggatccaac 403  Q
    ||||||| |||||| || |||| || |||||||| |||||||||  ||| |||||||| | | | || |||| ||||||||| | ||  |||||||||||    
T  42187726 acaacaacaacaacaaagccttatcccactaagtggggtcggctacatggatcaaattacgccataaatgttctatcataaaccaat--ttggatccaac 42187629  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagttttt 448  Q
    | | ||||||||| || |||| ||||||||||||| ||| |||||    
T  42187628 taattaatctctaaatatttcctaatagtttctcttataattttt 42187584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 453
Target Start/End: Complemental strand, 43282604 - 43282547
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||||| ||| ||| ||| ||| ||||||||||||||| ||||||||||||||    
T  43282604 gatccaactcaataacctcaagaacttacttaatagtttctcttatagtttttctagg 43282547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 44401224 - 44401269
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  44401224 taatctctaaatctttcttaatagtttctcttataatttttctagg 44401269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 25268369 - 25268321
Alignment:
Q  198 agttttacaccgacatccaatgagaattcatgataatgccacataagcc 246  Q
    ||||||| ||||||||| ||||| ||||||||||| |||||||||||||    
T  25268369 agttttataccgacatctaatgaaaattcatgatattgccacataagcc 25268321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 452
Target Start/End: Original strand, 32368424 - 32368480
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    ||||||||||| ||||||||| ||||| |||||||| |||||| |||| ||||||||    
T  32368424 gatccaactcactaatctctaaatcttccttaatagcttctcttatagattttctag 32368480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 454
Target Start/End: Original strand, 38103680 - 38103758
Alignment:
Q  375 tttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggc 454  Q
    ||||||||||| | || ||||||||||||||| ||||||||   | |||| ||||||| ||||| |||||||||||||||    
T  38103680 tttatcataaa-caatatttggatccaactcattaatctcttagtatttcctaatagtctctcttatagtttttctaggc 38103758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 491
Target Start/End: Complemental strand, 46973786 - 46973698
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatct 491  Q
    |||| ||||| |||||||||||| ||| |||||||||||||| | |||||||| |||      ||||| |||| |||||| ||||||||||||||    
T  46973786 atcccactcattaatctctagatgtttattaatagtttctcttacagtttttcaagg------tctatctctggtgatctgactatcctccatct 46973698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 501
Target Start/End: Complemental strand, 1011329 - 1011137
Alignment:
Q  307 aacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactca 406  Q
    ||||| ||||||||| |||| || |||||||| |||||||||  ||  |||||||| | | | |||||| |||| |||| | || || |||||||| |||    
T  1011329 aacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacaccataatgttctatcctaaacc-atatt-ggatccaaatca 1011232  T
Q  407 gtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
     ||| || || || |||| ||||| ||||||| ||| ||||||||||  ||||||||  |||  |||||| ||| ||||  ||||||||||||||    
T  1011231 ttaacctttaaatatttcctaataatttctctcataatttttctaggtcttcctctacctcttttgatctgactctcctttatctgatctactct 1011137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 5336111 - 5336052
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcc 459  Q
    ||||||||| ||||||||||||| ||||||||||| ||||  |||||||||| ||| |||||    
T  5336111 tccaactcattaatctctagatcattcttaatagtatctc--atagtttttcaaggttttcc 5336052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 438
Target Start/End: Complemental strand, 9191958 - 9191928
Alignment:
Q  408 taatctctagatctttcttaatagtttctct 438  Q
    |||||||||||||||||||||||||||||||    
T  9191958 taatctctagatctttcttaatagtttctct 9191928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 438
Target Start/End: Original strand, 40139047 - 40139077
Alignment:
Q  408 taatctctagatctttcttaatagtttctct 438  Q
    |||||||||||||||||||||||||||||||    
T  40139047 taatctctagatctttcttaatagtttctct 40139077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 42177110 - 42177160
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    |||||| | |||||||||||||||||||||| |||||| |||| |||||||    
T  42177110 aactcatttatctctagatctttcttaatagattctcttataggttttcta 42177160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 501
Target Start/End: Original strand, 44855170 - 44855364
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || |||||||| |||||||||  ||| | |||||| | | | | ||||  |||||||| | |  ||||||||||||    
T  44855170 aacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggaccaaattacgccatagtgtt--atcataaaccaaa-tttggatccaac 44855266  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||| | | ||||| ||||||  |||| |||||||| |||||||| |||||  |||||||| ||||  | |  | ||| |||||||| |||||||||||    
T  44855267 tcattgacctctaaatcttttctaatggtttctctaatagttttcctaggtcttcctctacttcttttaacttgactctcctccatttgatctactct 44855364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 546
Target Start/End: Original strand, 48202699 - 48202939
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| |||||||||||||| ||  || |||  |||| | ||| ||| |||||||| | | |||||||| || |||||| | || |||  |||||||    
T  48202699 aacaacaacaacaaccaaaccttatccaaccaagg-gggttgactgcatggatcaaattgcaccacaatgttctaacataaacc-atatttcaatccaac 48202796  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctac 503  Q
    ||| ||| ||||| | |||||||||   | ||||| ||||||||||||||| |||||||   | | ||||| | ||||||| |||| ||||||||||| |    
T  48202797 tcattaaactctacaactttcttaacgatctctcttatagtttttctaggccttcctctgcctataatgatttgactatccaccatatgatctactctcc 48202896  T
Q  504 ttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    || ||| | ||||| |    ||||||||||||||  |||||||    
T  48202897 ttactacagaatctacaagtcttctctctacatgcgcaaacca 48202939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 3665705 - 3665738
Alignment:
Q  198 agttttacaccgacatccaatgagaattcatgat 231  Q
    |||||||||| |||||||||||||||||||||||    
T  3665705 agttttacacggacatccaatgagaattcatgat 3665738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Original strand, 28542032 - 28542069
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagttt 434  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  28542032 atccaactcattaatctctaaatctttcttaatagttt 28542069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 41483681 - 41483640
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    |||||||||  |||| ||||||||||||||||||||||||||    
T  41483681 atccaactcgttaatttctagatctttcttaatagtttctct 41483640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 48735896 - 48735953
Alignment:
Q  303 gaacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaa 360  Q
    ||||||||| |||||||||||||| || |||||||| |||| ||||  ||||||||||    
T  48735896 gaacaacaacaacaaccaaaccttatcccactaagtggggttggctacatgaatcaaa 48735953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 444
Target Start/End: Complemental strand, 14057736 - 14057625
Alignment:
Q  332 actaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatag 431  Q
    ||||||| |||| ||||  ||| |||||||| ||| | |||||| ||||||||| | || |||| ||| ||| || ||| ||||| ||||||| ||||||    
T  14057736 actaagtggggttggctacatggatcaaattaccccataatgttctatcataaacc-atatttgaatcgaacgcattaacctctaaatctttcctaatag 14057638  T
Q  432 tttctctgatagt 444  Q
    ||||||| |||||    
T  14057637 tttctcttatagt 14057625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 444
Target Start/End: Complemental strand, 14367764 - 14367653
Alignment:
Q  332 actaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatag 431  Q
    ||||||| |||| ||||  ||| |||||||| ||| | |||||| ||||||||| | || |||| ||| ||| || ||| ||||| ||||||| ||||||    
T  14367764 actaagtggggttggctacatggatcaaattaccccataatgttctatcataaacc-atatttgaatcgaacgcattaacctctaaatctttcctaatag 14367666  T
Q  432 tttctctgatagt 444  Q
    ||||||| |||||    
T  14367665 tttctcttatagt 14367653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 14593942 - 14593898
Alignment:
Q  409 aatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| |  ||||||||||||||||| ||||||||||||||    
T  14593942 aatctctaggttcttcttaatagtttctcttatagtttttctagg 14593898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 16013465 - 16013421
Alignment:
Q  409 aatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| |  ||||||||||||||||| ||||||||||||||    
T  16013465 aatctctaggttcttcttaatagtttctcttatagtttttctagg 16013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 307 - 423
Target Start/End: Complemental strand, 27649063 - 27648948
Alignment:
Q  307 aacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactca 406  Q
    ||||| ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | ||| |||| ||||||||| | |  |||||||||||||||    
T  27649063 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccacagtgttctatcataaaccaaa-tttggatccaactca 27648965  T
Q  407 gtaatctctagatcttt 423  Q
     | | ||||| ||||||    
T  27648964 ttgacctctaaatcttt 27648948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 6e-26; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 306 - 546
Target Start/End: Original strand, 7359259 - 7359496
Alignment:
Q  306 caacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactc 405  Q
    |||||| |||||||||  |||||| |||||||| ||||| |||  ||| |||||||| |   | ||||||| ||| |||| | || ||| |||||||||     
T  7359259 caacaacaacaaccaagtcttgtcccactaagtggggtcagctacatggatcaaattacgtcataatgttt-atcgtaaacc-atatttcgatccaactt 7359356  T
Q  406 agtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctactt 505  Q
    | |||||||||||| ||||| |||||||||||| || ||||||||||||||||||||   |||  |||| | |||||||||||||||||||||||| |||    
T  7359357 attaatctctagatttttctaaatagtttctcttatggtttttctaggctttcctctgcctctagtgatatgactatcctccatctgatctactctcctt 7359456  T
Q  506 gctatataatctccggaccttctctctacatgtccaaacca 546  Q
     ||| | ||||| |  | |||||||||||||| ||||||||    
T  7359457 actacagaatctacatatcttctctctacatg-ccaaacca 7359496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 515
Target Start/End: Complemental strand, 14668057 - 14667847
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    ||||||||  ||||||||  ||| || |||||||| ||||||| |  ||| |||||||| | | | |||||| ||||||||| | ||  |||||||||||    
T  14668057 aacaacaactacaaccaagtcttatcccactaagtggggtcggttacatggatcaaattacaccataatgttctatcataaacc-atacttggatccaac 14667959  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctac 503  Q
    ||| |||||||||||||||||||| ||| |||||| |||||||||||||| ||||| ||   |||  |||| |||||||  ||||||||||||||||| |    
T  14667958 tcattaatctctagatctttcttagtagcttctcttatagtttttctaggatttccgctgcctctagtgatataactataatccatctgatctactctcc 14667859  T
Q  504 ttgctatataat 515  Q
    || ||| |||||    
T  14667858 ttactacataat 14667847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 546
Target Start/End: Complemental strand, 2713137 - 2712989
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    ||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||   |||  |||| | ||| ||||||||||||||||    
T  2713137 tccaactcattcatctctagatccttcttaatagtttctcttatagtttttctaggtcttcccctgactctagtgatttgactctcctccatctgatcta 2713038  T
Q  498 ctctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||| |||  || | ||||  | |  |||||||||||||| ||||||||    
T  2713037 ctctccttcatacagaatccacaggtcttctctctacatgcccaaacca 2712989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 9917538 - 9917642
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| | ||||||| |||||||| |||||||||||| ||||||||||||||   |||||| | |||  |||| | ||||||||||||||||||     
T  9917538 atccaactcattgatctctatatctttctaaatagtttctctaatagtttttctaggtcatcctctgtctcttgtgatttgactatcctccatctgatcg 9917637  T
Q  497 actct 501  Q
    |||||    
T  9917638 actct 9917642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 501
Target Start/End: Original strand, 12576951 - 12577052
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctact 499  Q
    ||||||| ||||||||||||||||||||||||||| |||  |||||||||||||  |||||||   |||  ||||   |||| |||||||||||||||||    
T  12576951 caactcattaatctctagatctttcttaatagtttatcttgtagtttttctaggtcttcctctgcctctagtgataggactaccctccatctgatctact 12577050  T
Q  500 ct 501  Q
    ||    
T  12577051 ct 12577052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 546
Target Start/End: Complemental strand, 21952548 - 21952402
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    |||||| || ||||||||||||| |||| |||||||||||  ||||||||||||||  |||| |||  |||  |||| | |||  |||||||||||||||    
T  21952548 tccaacccattaatctctagatccttctcaatagtttctc--atagtttttctaggtcttcccctacctctagtgatttgactcccctccatctgatcta 21952451  T
Q  498 ctctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
     ||| ||| ||||| ||||  | |  |||||||||||||||||||||||    
T  21952450 ttctccttactatagaatccacaggacttctctctacatgtccaaacca 21952402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 462
Target Start/End: Complemental strand, 6889185 - 6889122
Alignment:
Q  399 ccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||| | ||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||    
T  6889185 ccaactaattaatctctaaatctttcctaatagtttctcttatagtttttctaggccttcctct 6889122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 491
Target Start/End: Complemental strand, 7678673 - 7678578
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatct 491  Q
    ||||||||||| |||||||||||||||||| |||||||||||| || ||||| ||||   |||||||   |||  |||||| ||||||||||||||    
T  7678673 gatccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcctctagtgatctgactatcctccatct 7678578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 419 - 546
Target Start/End: Original strand, 15489602 - 15489729
Alignment:
Q  419 tctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatataatctc 518  Q
    |||||||||||||||||||| || |||||||||||  |||||||   |||  ||||  ||||||||||||||| ||||||||| |||  || | |||||     
T  15489602 tctttcttaatagtttctcttattgtttttctaggtcttcctctgcctctagtgattcaactatcctccatctaatctactctccttaatacaaaatcta 15489701  T
Q  519 cggaccttctctctacatgtccaaacca 546  Q
    |  | |||||||||||||| ||||||||    
T  15489702 caaatcttctctctacatgcccaaacca 15489729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 27998631 - 27998569
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    |||||| |||||| ||||||||||||| |||||||||| ||||||||||||||  ||||||||    
T  27998631 aactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcctcta 27998569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 453
Target Start/End: Complemental strand, 28081 - 28020
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||||||| | ||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  28081 tttggatccaacttattaacctctaaatctttcctaatagtttctcttatagtttttctagg 28020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 462
Target Start/End: Complemental strand, 9235267 - 9235178
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||| ||||||||| | || ||| |||||| |||| ||||||||| |||||||||||||||||||||  |||||||||||||  |||||||    
T  9235267 aatgttctatcataaacc-atatttcgatccagctcattaatctctatatctttcttaatagtttctct--tagtttttctaggtcttcctct 9235178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 14749501 - 14749436
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||  ||||||||||||| ||||| ||||||||||| ||||||||||||||  |||||||    
T  14749501 atccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtcttcctct 14749436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 18698988 - 18698923
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||||||| ||||||||||||||||||| |||  |||||| ||||||||||||||  |||||||    
T  18698988 atccaactcactaatctctagatctttcttgatacattctcttatagtttttctaggtattcctct 18698923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 453
Target Start/End: Complemental strand, 30588642 - 30588585
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||||| | ||||||||||||||||||| | ||||||| ||||||||||||||    
T  30588642 gatccaactcattcatctctagatctttcttaacaatttctcttatagtttttctagg 30588585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 501
Target Start/End: Complemental strand, 43475434 - 43475330
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatc 495  Q
    ||||||||||| |||||||| |||||||||||||||||||||| | |||||||||| | || | | |   | |  |||||| ||||||||||||||||||    
T  43475434 gatccaactcattaatctctggatctttcttaatagtttctctta-agtttttctatgtttactttttcctatagtgatctgactatcctccatctgatc 43475336  T
Q  496 tactct 501  Q
    ||||||    
T  43475335 tactct 43475330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 516
Target Start/End: Complemental strand, 6788325 - 6788142
Alignment:
Q  332 actaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatag 431  Q
    |||||||  ||||||||  |||||||||||| | ||| |||||| ||||||||| | || |||   ||||||||| |||| || |  |||||| ||||||    
T  6788325 actaagtgaggtcggctacatgaatcaaattacgctataatgttctatcataaatc-atatttcagtccaactcattaatttccaagtctttcctaatag 6788227  T
Q  432 tttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatataatc 516  Q
    || || ||||||||||||||||  |||||||   |||  |||||| || |||||||||||| || ||||| ||| ||| ||||||    
T  6788226 ttcctttgatagtttttctaggtcttcctctgcctctagtgatctgaccatcctccatctggtcgactctccttactacataatc 6788142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 452
Target Start/End: Complemental strand, 29922467 - 29922423
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||    
T  29922467 taatctctaaatctttcttaatagtttctcttatagtttttctag 29922423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 38684674 - 38684618
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||| | ||||||||||||||||||||| |||||||||  |||||||||||||    
T  38684674 atccaactaattaatctctagatctttcttaaaagtttctcttgtagtttttctagg 38684618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 42199587 - 42199531
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||||| |||| ||||||||||||| |||||||| ||| ||||||||||||||    
T  42199587 atccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctagg 42199531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 501
Target Start/End: Complemental strand, 1525837 - 1525734
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    ||||||||| | |||||| |||| ||| |||||||||||||  |||||||||||||  | || |||  |||  |||||| ||| ||||||||||||||||    
T  1525837 tccaactcatttatctctggatccttcctaatagtttctcttgtagtttttctaggtctacccctacctctagtgatctgactctcctccatctgatcta 1525738  T
Q  498 ctct 501  Q
    ||||    
T  1525737 ctct 1525734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 10082834 - 10082889
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| ||||||||||||| || ||| |||||||||| ||||||||||||||    
T  10082834 tccaactcattaatctctagatccttgttactagtttctcttatagtttttctagg 10082889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 33667628 - 33667573
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| ||||||||||||| |||||||||  |||||| ||||||||||||||    
T  33667628 tccaactcattaatctctagatccttcttaataacttctcttatagtttttctagg 33667573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 315 - 546
Target Start/End: Complemental strand, 38685242 - 38685012
Alignment:
Q  315 caaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctc 414  Q
    ||||||| |||| || |||||||| |||||||||  ||| |||||||  | | | | |||| ||||||||| | || ||||||||||||||| | | |||    
T  38685242 caaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatattgttctatcataaacc-atatttggatccaactcattgacctc 38685144  T
Q  415 tagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactctacttgctatataa 514  Q
    || ||| ||  |||| |||||||| |||||||| |||||  ||||||||  |||  | | || ||| |||||||| ||||||||||| ||| | |    |    
T  38685143 taaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacgacggca 38685044  T
Q  515 tctccggaccttctctctacatgtccaaacca 546  Q
    ||| |||  |||||||||||||||||||||||    
T  38685043 tctacgggtcttctctctacatgtccaaacca 38685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 42199479 - 42199424
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| |||| ||||||||||||| |||||||| ||| ||||||||||||||    
T  42199479 tccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctagg 42199424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 4460401 - 4460336
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    |||||||||| |||||||||| |||||||||||||| ||| | | |||||||||||| |||||||||    
T  4460401 atccaactcattaatctctaggtctttcttaatagtctctttta-agtttttctaggttttcctcta 4460336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 438
Target Start/End: Original strand, 28186863 - 28186904
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    |||||||||| ||||||||| |||||||||||||||||||||    
T  28186863 atccaactcattaatctctaaatctttcttaatagtttctct 28186904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 2066191 - 2066135
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||||| |||||||||||||||| ||| |||||||| | ||| ||||||||||    
T  2066191 atccaactcattaatctctagatcttttttagtagtttcttttataatttttctagg 2066135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 498
Target Start/End: Complemental strand, 15168968 - 15168864
Alignment:
Q  394 tggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctga 493  Q
    ||||||||||| | ||| ||||| || |||| ||| ||||||||| |||||||||||||| | |||||||  |||  | |||| ||| |||||||||| |    
T  15168968 tggatccaacttattaacctctaaatttttcctaacagtttctcttatagtttttctaggttgtcctctacctcttctaatctcactctcctccatctaa 15168869  T
Q  494 tctac 498  Q
    |||||    
T  15168868 tctac 15168864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 546
Target Start/End: Original strand, 31636009 - 31636157
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    ||||||||| | ||||||| ||| ||||| ||||||||||| |||||||||||||   |||| |||| |||  |||| | |||  || |||||| |||||    
T  31636009 tccaactcattgatctctatatccttcttgatagtttctctaatagtttttctagatcttcccctatctctagtgatttgactccccaccatctaatcta 31636108  T
Q  498 ctctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||| ||| ||| |  |||  |||  |||||||||||||| ||||||||    
T  31636109 ctctccttactacaacatccacgggtcttctctctacatgcccaaacca 31636157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 11675723 - 11675672
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagttttt 448  Q
    |||||||||| ||||||||| |||| || ||||||||||||| |||||||||    
T  11675723 atccaactcattaatctctaaatctgtcctaatagtttctcttatagttttt 11675672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 15369886 - 15369941
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| | |||| ||||| |||||||||||||||||| ||| ||||||||||    
T  15369886 tccaactcatttatctttagatttttcttaatagtttctcttatactttttctagg 15369941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 435
Target Start/End: Complemental strand, 20367179 - 20367049
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| ||  || |||| |||| |||| |||| |||||||| |   | |||||| | ||||||| | || ||||||||||||    
T  20367179 aacaacaacaacaaccaagccttatcctaccaagtggggttggctatatggatcaaattacgtcataatgttatgtcataaacc-atatttggatccaac 20367081  T
Q  404 tcagtaatctctagatctttcttaatagtttc 435  Q
    ||| ||||||||||||| ||| || |||||||    
T  20367080 tcattaatctctagatccttcctactagtttc 20367049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 463
Target Start/End: Original strand, 28976855 - 28977013
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || |||||||| |||||||||  |||||||||||  | | | | |||| |||||| | || |  ||||||||||||    
T  28976855 aacaacaacaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaatgacgccatagtgttctatcat-acaccaaatttggatccaac 28976953  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||| | | ||||| ||| ||  |||| |||||||| |||||||| |||||  ||||||||    
T  28976954 tcattgacctctaaatcctttataatggtttctctaatagttttcctaggtcttcctcta 28977013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 462
Target Start/End: Complemental strand, 6859564 - 6859510
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||| || ||||||| ||||||||||||| ||||||||||||||  |||||||    
T  6859564 taatctgtaaatctttcctaatagtttctcttatagtttttctaggtcttcctct 6859510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 501
Target Start/End: Complemental strand, 13423115 - 13423085
Alignment:
Q  471 tgatctaactatcctccatctgatctactct 501  Q
    |||||||||||||||||||||||||||||||    
T  13423115 tgatctaactatcctccatctgatctactct 13423085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 24391089 - 24391123
Alignment:
Q  410 atctctagatctttcttaatagtttctctgatagt 444  Q
    ||||||||||||||||||||||||||||| |||||    
T  24391089 atctctagatctttcttaatagtttctctcatagt 24391123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 39322141 - 39322191
Alignment:
Q  384 aaactatgtttggatccaactcagtaatctctagatctttcttaatagttt 434  Q
    ||||||| |||  |||||||||| |||||| ||||||||||||||||||||    
T  39322141 aaactatatttctatccaactcattaatctttagatctttcttaatagttt 39322191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 453
Target Start/End: Original strand, 3775256 - 3775309
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||| ||||| ||||  |||||||| |||||||||| ||||||||||||||    
T  3775256 caactcattaatcgctagtcctttcttagtagtttctcttatagtttttctagg 3775309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 5303638 - 5303581
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggc 454  Q
    |||||||||| ||| ||||| |||||| | |||||||||||| | |||||||||||||    
T  5303638 atccaactcattaaactctaaatctttttcaatagtttctcttacagtttttctaggc 5303581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 434
Target Start/End: Complemental strand, 28005725 - 28005692
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagttt 434  Q
    |||||| |||||||||||||||||||||||||||    
T  28005725 aactcattaatctctagatctttcttaatagttt 28005692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 30213861 - 30213804
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaat 361  Q
    |||||||||||||||||| |||| || |||||||| |||||||||  ||| |||||||    
T  30213861 aacaacaaaaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 30213804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 460
Target Start/End: Complemental strand, 32759768 - 32759707
Alignment:
Q  399 ccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcct 460  Q
    |||||||| || ||| || ||||||||||||||||||| | ||| |||||||||| ||||||    
T  32759768 ccaactcattattctataaatctttcttaatagtttcttttataatttttctaggttttcct 32759707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 4e-24; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 313 - 501
Target Start/End: Complemental strand, 33504501 - 33504313
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaa-t 411  Q
    ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | | |||||| ||||||| | | || |||  |||||||| | ||| |    
T  33504501 aacaaccaagccttatcccactaagtggggtcggctagatggatcaaattacgccataatgttctatcatatacc-atatttcaatccaacttattaaat 33504403  T
Q  412 ctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| ||||   |||  |||||| |||| |||||||||||||||||||    
T  33504402 ctctagatctttcttaatagtttctcttatagtttttctaggtttttctctgcctctagtgatctgactaccctccatctgatctactct 33504313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 499
Target Start/End: Original strand, 35755241 - 35755439
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    ||||| || ||||||||| |||| || ||||||||||||||||||| ||| |||||||| |   |||||||| |||||| |||| || ||||||||||||    
T  35755241 aacaagaacaacaaccaagccttatcccactaagtagggtcggctgcatggatcaaattacggcacaatgttctatcat-aaaccatatttggatccaac 35755339  T
Q  404 tcagtaat----ctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctact 499  Q
     || ||||    ||||| ||||||| ||||||||||| | ||||||||||||||| |||||||   |||  |||| | ||| ||||||||||||| ||||    
T  35755340 ccattaattaacctctaaatctttcctaatagtttctgttatagtttttctaggccttcctctccctcttttgatatgactttcctccatctgatgtact 35755439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 19235072 - 19235176
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||  ||||||||| |||  |||| | |||  ||||||||||||||    
T  19235072 atccaaatcattaatctctagatctttctcaatagtttctcttatagtttttctaggtcttcctctatctctagtgatttgactcccctccatctgatct 19235171  T
Q  497 actct 501  Q
    |||||    
T  19235172 actct 19235176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 305 - 443
Target Start/End: Complemental strand, 9496151 - 9496014
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| ||||||||| ||||||| |||||||| |||| ||||  ||| |||||||| | | | |||||| ||||||||| | || |||||||||||||    
T  9496151 acaacaacaacaaccaagccttgtcccactaagtggggttggctacatggatcaaattacgccataatgttctatcataaacc-atatttggatccaact 9496053  T
Q  405 cagtaatctctagatctttcttaatagtttctctgatag 443  Q
    || ||| ||||| |||||||| |||||||||||| ||||    
T  9496052 cattaacctctaaatctttctgaatagtttctcttatag 9496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 501
Target Start/End: Complemental strand, 18959106 - 18959001
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatc 495  Q
    ||||||||||| ||||||| |  |||||| | |||||||||||  |||||||||||||  |||||||   ||||||||||| ||||||||||||||||||    
T  18959106 gatccaactcattaatctccaagtctttccttatagtttctcttgtagtttttctaggtcttcctctgcctctgatgatctgactatcctccatctgatc 18959007  T
Q  496 tactct 501  Q
    ||||||    
T  18959006 tactct 18959001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 501
Target Start/End: Complemental strand, 38435147 - 38435042
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatc 495  Q
    |||||||| || |||||||||||||||||||||||||||||||  |||||||||||||  | |||||   |||  |||||| |||||||||||| |||||    
T  38435147 gatccaacacattaatctctagatctttcttaatagtttctcttgtagtttttctaggtctacctctgcctctagtgatctgactatcctccatatgatc 38435048  T
Q  496 tactct 501  Q
    ||||||    
T  38435047 tactct 38435042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 464
Target Start/End: Complemental strand, 33287641 - 33287548
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctat 464  Q
    |||||| ||||||||| | || ||| |||| |||||| |||| |||||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  33287641 aatgttctatcataaacc-atatttcgatctaactcattaatttctagatctttcttaatagtttctcttatagtttttctaggtcttcctctat 33287548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 398 - 543
Target Start/End: Original strand, 43752036 - 43752181
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatcta 497  Q
    ||||||||| |||| || | ||||||| ||||||||||||||||||||||||||||  ||||| |   ||   |||||| | ||||||||||||||||||    
T  43752036 tccaactcattaatttccaaatctttcctaatagtttctctgatagtttttctaggtcttcctatgcctccagtgatctgagtatcctccatctgatcta 43752135  T
Q  498 ctctacttgctatataatctccggaccttctctctacatgtccaaa 543  Q
    |||| | | ||| |||||||   |  ||||||||||||||||||||    
T  43752136 ctctccctactacataatctataggtcttctctctacatgtccaaa 43752181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 37481705 - 37481809
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatct 496  Q
    |||||||||| | ||| ||||||||||||||||||||||||| ||||||||||| ||  ||| ||||  ||   ||||||||||  ||||||||||||||    
T  37481705 atccaactcatttatcgctagatctttcttaatagtttctctaatagtttttcttggtcttcatctacctccagtgatctaactcccctccatctgatct 37481804  T
Q  497 actct 501  Q
    |||||    
T  37481805 actct 37481809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 44437715 - 44437865
Alignment:
Q  302 agaacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatcca 401  Q
    |||||||||| ||||||||| |||| || |||||||| |||||||||  |||||| |||   | | | | |||| ||||| ||||| ||||||   ||||    
T  44437715 agaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatgaattaaacaacgccatagtgttctatca-aaaaccatgtttttctcca 44437813  T
Q  402 actcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||| | ||||||||||| ||||||||||||||||  ||||||||||||||    
T  44437814 actcatttatctctagatccttcttaatagtttctcatatagtttttctagg 44437865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 462
Target Start/End: Original strand, 7431980 - 7432042
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    ||||||| ||||||||||||| ||||||||||||||||  |||||||||||||| ||||||||    
T  7431980 caactcattaatctctagatccttcttaatagtttctccaatagtttttctaggttttcctct 7432042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 453
Target Start/End: Original strand, 26784431 - 26784484
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  26784431 caactcattaatctctatatctttcttaatagtttctcttatagtttttctagg 26784484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 449
Target Start/End: Original strand, 9556366 - 9556509
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| ||||||||| |||  || |||||||| | |||||||  ||| |||||||| | |   |||||| ||||||||| | || | | |||||||||    
T  9556366 acaacaacaacaaccaagcctcatcccactaagtggagtcggctacatgtatcaaattacaccctaatgttctatcataaacc-atatcttgatccaact 9556464  T
Q  405 cagtaatctctagatctttcttaatagtttctctgatagtttttc 449  Q
    || ||||| ||||||||||||||||||||| ||| ||||||||||    
T  9556465 cattaatcactagatctttcttaatagtttatcttatagtttttc 9556509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 546
Target Start/End: Complemental strand, 12141743 - 12141589
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatct 491  Q
    ||||||||||| ||| |||||||||  |||||| ||||||||||||  |||| |||||||||  ||||||||  |||  | || | ||||||||| ||||    
T  12141743 tttggatccaagtcattaatctctaagtctttcctaatagtttctcctatagcttttctaggtcttcctctacctcttgtaatttgactatcctcaatct 12141644  T
Q  492 gatctactctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||||||||| ||| ||| | ||||| | |  ||||| ||||| || ||||||||    
T  12141643 gatctactctccttactagagaatctacaggtcttctttctacgtgcccaaacca 12141589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 473 - 546
Target Start/End: Complemental strand, 3481259 - 3481186
Alignment:
Q  473 atctaactatcctccatctgatctactctacttgctatataatctccggaccttctctctacatgtccaaacca 546  Q
    |||| |||||||||||||||||||||||| ||||||| | |||||   |  |||||||||||||||||||||||    
T  3481259 atctgactatcctccatctgatctactctccttgctacagaatctataggtcttctctctacatgtccaaacca 3481186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 26670961 - 26670896
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||||||||| ||||||||| ||||||||||||||||||| | ||||||||| ||||  ||||||||    
T  26670961 tccaactcattaatctctaaatctttcttaatagtttcttttatagtttttgtaggtcttcctcta 26670896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 501
Target Start/End: Original strand, 37470220 - 37470325
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatc 495  Q
    ||||||||||| |||||||||||||| || ||||||||||||| |||||||||  |||  ||||||||   ||  |||||| |||| | ||||||| |||    
T  37470220 gatccaactcattaatctctagatctgtcctaatagtttctcttatagttttttcaggtcttcctctaccactagtgatctgactaccttccatctaatc 37470319  T
Q  496 tactct 501  Q
    ||||||    
T  37470320 tactct 37470325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 43832292 - 43832243
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagttt 446  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  43832292 atccaactcattaatctctagatccttcttaatagtttctcttatagttt 43832243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 1626386 - 1626342
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagt 444  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||    
T  1626386 caactcattaatctctagatctttcttaatagtttctcttatagt 1626342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 12026097 - 12026149
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||| ||||||    
T  12026097 aactcattaatctctagatctttcttaatagtttctcctatagtttctctagg 12026149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 453
Target Start/End: Original strand, 12489799 - 12489946
Alignment:
Q  305 acaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaact 404  Q
    ||||||| ||||||||| |||| || |||||||| |||||||||  ||||||||||   | | | | |||| ||||| ||||| |||| |   |||||||    
T  12489799 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaacgacgccaaagtgttatatca-aaaaccatgtctttctccaact 12489897  T
Q  405 cagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    || | ||||||||||| ||| ||||||||||||  ||||||||||||||    
T  12489898 catttatctctagatccttcctaatagtttctcatatagtttttctagg 12489946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 19336955 - 19337038
Alignment:
Q  370 aatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttct-ctgatagtttttctagg 453  Q
    |||||| ||||||||| | || ||| ||||||||||| ||||||||| ||||||||| |||||||||  ||||||||||||||||    
T  19336955 aatgttctatcataaacc-atatttcgatccaactcattaatctctaaatctttctttatagtttctagtgatagtttttctagg 19337038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 42149702 - 42149789
Alignment:
Q  350 tatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    ||||||||||||| | | | |||||| ||||||||| | || |||  ||||| |||| |||||||||||||||||||||||||||||||    
T  42149702 tatgaatcaaattacgccataatgttctatcataaacc-atatttctatccagctcaataatctctagatctttcttaatagtttctct 42149789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 460
Target Start/End: Complemental strand, 19024372 - 19024309
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcct 460  Q
    |||||||||| |||||| |||||||||||||||||||||||| || ||| ||||| || |||||    
T  19024372 atccaactcattaatctttagatctttcttaatagtttctcttatggttcttctacgccttcct 19024309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 42543428 - 42543373
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| | ||||||||||| ||| ||||||||||||| ||||||||||||||    
T  42543428 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctagg 42543373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 463
Target Start/End: Original strand, 43573126 - 43573283
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || |||||||| |||||||||  ||| |||||||| | | | || |||  |||||||| | || ||||||||||||    
T  43573126 aacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataacgttcgatcataaatc-atatttggatccaac 43573224  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||| ||| || || ||||||| || | |||| ||| ||||||||||||||  ||||||||    
T  43573225 tcattaacct-taaatctttcctagttgtttttcttatagtttttctaggtcttcctcta 43573283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 438
Target Start/End: Original strand, 8197537 - 8197670
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| | || || ||||||||||||||||||  ||| ||||||   | | | ||| || ||||||| | | || |||  |||||||    
T  8197537 aacaacaacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatc-atatttctatccaac 8197635  T
Q  404 tcagtaatctctagatctttcttaatagtttctct 438  Q
    ||| |||||| ||||||||||||||||||||||||    
T  8197636 tcattaatctttagatctttcttaatagtttctct 8197670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 438
Target Start/End: Original strand, 8202297 - 8202430
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| | || || ||||||||||||||||||  ||| ||||||   | | | ||| || ||||||| | | || |||  |||||||    
T  8202297 aacaacaacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatc-atatttctatccaac 8202395  T
Q  404 tcagtaatctctagatctttcttaatagtttctct 438  Q
    ||| |||||| ||||||||||||||||||||||||    
T  8202396 tcattaatctttagatctttcttaatagtttctct 8202430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 18188946 - 18188892
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 451  Q
    ||||| |||| |||||||||||||||||| |||||||||||| ||| ||||||||    
T  18188946 atccagctcattaatctctagatctttctgaatagtttctcttataatttttcta 18188892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 12734986 - 12734838
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || |||||||| |||||| ||  ||| |||||||| | | | | |||| ||||||||| | || ||||||||||||    
T  12734986 aacaacaacaacaaccaagccttatcccactaagtggggtcgactacatggatcaaattacaccatagtgttctatcataaacc-atatttggatccaac 12734888  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||| | | ||||| ||| ||  |||| |||||||| |||||||| |||||    
T  12734887 tcattgacctctaaatcctttctaatggtttctctaatagttttcctagg 12734838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 12882041 - 12882189
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| ||||||||| |||| || ||||||||  ||| ||||  ||| |||||||| | | | |||||| ||||| ||| | || ||||||||||||    
T  12882041 aacaacaacaacaaccaagccttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgttctatcacaaacc-atatttggatccaac 12882139  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||| ||| ||||| || |||| || |||||||||| |||| |||| ||||    
T  12882140 tcattaacctctaaatatttcctagtagtttctcttatagcttttatagg 12882189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 452
Target Start/End: Original strand, 6230363 - 6230407
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||    
T  6230363 taatctctagatttttcttaatagtttctctaatattttttctag 6230407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 11006901 - 11006853
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtt 445  Q
    ||||||| || |||||||||| |||||||||||||||||||| ||||||    
T  11006901 atccaacccattaatctctaggtctttcttaatagtttctcttatagtt 11006853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 446
Target Start/End: Original strand, 23915782 - 23915830
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagttt 446  Q
    |||| |||| |||||||||||| |||||||||||||||||| |||||||    
T  23915782 tccacctcattaatctctagatttttcttaatagtttctcttatagttt 23915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 42092711 - 42092655
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    |||||||| | ||||||||| |||||| |||||||||||||  ||||||||||||||    
T  42092711 atccaactaattaatctctacatcttttttaatagtttctcctatagtttttctagg 42092655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 5759084 - 5759139
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| | ||||||||||| |||||  |||||||||| ||||||||||||||    
T  5759084 tccaactcattgatctctagatccttcttggtagtttctctaatagtttttctagg 5759139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 499
Target Start/End: Original strand, 29548736 - 29548827
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctact 499  Q
    ||||||||| ||||||||||||| ||||||| |||||||||  |||  |||||||  ||||  |||| | |||| ||||||| |||||||||    
T  29548736 taatctctaaatctttcttaataatttctcttatagttttttcaggtcttcctctgcttctcgtgatttgactaccctccatttgatctact 29548827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 45640615 - 45640654
Alignment:
Q  399 ccaactcagtaatctctagatctttcttaatagtttctct 438  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  45640615 ccaacttattaatctctagatctttcttaatagtttctct 45640654  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 17429332 - 17429278
Alignment:
Q  308 acaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaatt 362  Q
    |||| ||||||||| |||| ||||||||||| |||||||||  ||||||||||||    
T  17429332 acaacaacaaccaagccttatctcactaagtggggtcggctacatgaatcaaatt 17429278  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 434
Target Start/End: Complemental strand, 31254479 - 31254445
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagttt 434  Q
    ||||||| |||||||||||||||||||||||||||    
T  31254479 caactcattaatctctagatctttcttaatagttt 31254445  T

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Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 33625287 - 33625325
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttct 436  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  33625287 tccaactcattaatctctagatatttcttaatagtttct 33625325  T

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Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 38860369 - 38860331
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctct 438  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  38860369 caactcatgaatctctagatctttcttaatagtttctct 38860331  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 19855656 - 19855591
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    ||||| |||| ||| |||| |||||||||||||||||||| | ||||||| ||||||  |||||||    
T  19855656 atccagctcattaacctctggatctttcttaatagtttcttttatagtttatctaggtcttcctct 19855591  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 452
Target Start/End: Complemental strand, 36870046 - 36869997
Alignment:
Q  403 ctcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    ||||| |||||||| ||| |||||| |||||||||| |||||||||||||    
T  36870046 ctcagaaatctctaaatccttcttattagtttctcttatagtttttctag 36869997  T

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Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 501
Target Start/End: Complemental strand, 38430169 - 38429974
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaac 403  Q
    |||||||| |||| |||| |||| ||||||||||| |||||||||  ||| |||||||  | | | | |||| ||||| ||||| || ||||||||||||    
T  38430169 aacaacaacaaca-ccaagccttatctcactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca-aaaaccatatttggatccaac 38430072  T
Q  404 tcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctaactatcctccatctgatctactct 501  Q
    ||| | | ||||| ||||||  |||| |||||||  || |||||  ||||  |||||||| ||||  | | || ||| |||||||| |||||||||||    
T  38430071 tcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacttcttttaacctgactctcctccatttgatctactct 38429974  T

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Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 438
Target Start/End: Complemental strand, 44415812 - 44415783
Alignment:
Q  409 aatctctagatctttcttaatagtttctct 438  Q
    ||||||||||||||||||||||||||||||    
T  44415812 aatctctagatctttcttaatagtttctct 44415783  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 4682260 - 4682320
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    ||||||||||||||| ||| ||||| ||||||| | | | ||||||| |||||||||||||    
T  4682260 tttggatccaactcattaacctctaaatctttcatgaaaatttctcttatagtttttctag 4682320  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 21834749 - 21834693
Alignment:
Q  396 gatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    ||||||||||| |||||| || || |||| ||||||||| ||| |||||||||||||    
T  21834749 gatccaactcattaatctataaatatttcctaatagtttatcttatagtttttctag 21834693  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 392 - 448
Target Start/End: Complemental strand, 37282290 - 37282234
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagttttt 448  Q
    |||| |||||||||| ||||  ||| ||||||| ||||||||||||| |||||||||    
T  37282290 tttgaatccaactcactaatagctaaatctttcgtaatagtttctcttatagttttt 37282234  T

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Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 462
Target Start/End: Original strand, 37452315 - 37452379
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    ||||||||| |||||||||  ||||||||||||| | |||| ||| ||||||||||  |||||||    
T  37452315 tccaactcattaatctctaattctttcttaatagctcctcttataatttttctaggtcttcctct 37452379  T

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Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 41779201 - 41779249
Alignment:
Q  400 caactcagtaatctctagatctttcttaatagtttctctgatagttttt 448  Q
    ||||||| |||||||||||||||| |||||| ||||||| ||| |||||    
T  41779201 caactcattaatctctagatcttttttaataatttctcttataattttt 41779249  T

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Target: scaffold0018 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 178509 - 178564
Alignment:
Q  398 tccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctagg 453  Q
    ||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  178509 tccaactcattaatctctatatctttcttaatagtttctcttatagtttttctagg 178564  T

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Target: scaffold0325 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 452
Target Start/End: Complemental strand, 11986 - 11936
Alignment:
Q  402 actcagtaatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  11986 actcattaatctctagatccttcttaatagtttctcttatagtttttctag 11936  T

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Target: scaffold0570 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 463
Target Start/End: Original strand, 1031 - 1102
Alignment:
Q  392 tttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctcta 463  Q
    ||||||||||||||| | | ||||| |||||| ||||| |||||||| |||||||| |||||  ||||||||    
T  1031 tttggatccaactcattgacctctaaatcttttttaatggtttctctaatagttttcctaggtcttcctcta 1102  T

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Target: scaffold0373 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 2393 - 2436
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagt 444  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||    
T  2393 aactcattaatctctagatctttcttaatagtctctcttatagt 2436  T

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Target: scaffold0279 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 17733 - 17680
Alignment:
Q  397 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttct 450  Q
    ||||||| || ||||||||| |||||| |||||||||||||| ||| |||||||    
T  17733 atccaacccattaatctctaaatcttttttaatagtttctcttatattttttct 17680  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 45553 - 45582
Alignment:
Q  418 atctttcttaatagtttctctgatagtttt 447  Q
    ||||||||||||||||||||||||||||||    
T  45553 atctttcttaatagtttctctgatagtttt 45582  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 66727 - 66666
Alignment:
Q  401 aactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctct 462  Q
    |||||| ||||||||||||||||||||||| ||| | | ||| ||||||||||  |||||||    
T  66727 aactcattaatctctagatctttcttaataattttttttataatttttctaggtcttcctct 66666  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 450
Target Start/End: Original strand, 160329 - 160465
Alignment:
Q  313 aacaaccaaaccttgtctcactaagtagggtcggctgtatgaatcaaattcccctacaatgttttatcataaaactatgtttggatccaactcagtaatc 412  Q
    ||||||||| |||| || |||||||| |||| ||||  |||| ||||||| | | | |||||| ||||||||| | || ||| | || |||||| ||||     
T  160329 aacaaccaagccttttcccactaagtggggttggctacatgattcaaattacgccataatgttctatcataaacc-atatttcggtcgaactcattaatt 160427  T
Q  413 tctagatctttcttaatagtttctctgatagtttttct 450  Q
    |||  ||||||| |||||||||||||  ||||||||||    
T  160428 tcttaatctttcctaatagtttctcttgtagtttttct 160465  T

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Target: scaffold0221 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 19203 - 19159
Alignment:
Q  304 aacaacaaaaacaaccaaaccttgtctcactaagtagggtcggct 348  Q
    |||||||| ||||||||||| || ||||||||||| |||||||||    
T  19203 aacaacaacaacaaccaaactttatctcactaagtggggtcggct 19159  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 452
Target Start/End: Original strand, 346872 - 346916
Alignment:
Q  408 taatctctagatctttcttaatagtttctctgatagtttttctag 452  Q
    |||||||||||||||| |||||||||| |||  ||||||||||||    
T  346872 taatctctagatcttttttaatagtttatcttgtagtttttctag 346916  T

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