View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21497_high_7 (Length: 251)
Name: NF21497_high_7
Description: NF21497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21497_high_7 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 2705843 - 2705606
Alignment:
| Q |
14 |
aaaatcctctacttttttatttcataagaaagtgcttattcttttaattatagtgaagaatttaaggcttatcaatcatctttcaggtttcaagagatag |
113 |
Q |
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| T |
2705843 |
aaaatcctctacttttttatttcataagaaagtgcttattcttttaattatagtgaagaatttaaggcttatcaatcatctttcaggtttcaagagatag |
2705744 |
T |
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| Q |
114 |
tacctttgaagacctcaacagtaataggggcagaagatccatcagtggcaacaaattggaataatcttataggaaaaaccctaaacaacaaatttgattt |
213 |
Q |
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| T |
2705743 |
tacctttgaagacctcaacagtaataggggcagaagatccatcagtggcaacaaattggaataatcttataggaaaaaccctaaacaacaaatttgattt |
2705644 |
T |
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| Q |
214 |
cccatggttaacacctatgttaaattcatccttaccaa |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
2705643 |
cccatggttaacacctatgttaaattcatccttaccaa |
2705606 |
T |
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