View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21497_low_11 (Length: 213)
Name: NF21497_low_11
Description: NF21497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21497_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 11177838 - 11177637
Alignment:
| Q |
1 |
ctctgtgtcattattattatgttcttcgtgttcttgtcccaacatatattccatttggctacaatcctgaacactcaggaatttcaaccttgggaagact |
100 |
Q |
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| T |
11177838 |
ctctgtgtcattattattatgttcttcgtgttcttgtcccaacatatattccatttggctacaatcctgaacactcaggaatttcaaccttgggaagact |
11177739 |
T |
|
| Q |
101 |
gagccgtgcgtcacgcaattctgatcatctccaacatctgttataatgttcttcaatgaatggcattccttaattctcaattcttccaacaatattattc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |
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| T |
11177738 |
gagccgtgcgtcacgcaattctgatcatctccaacatctgttatgatgttcttcaatgaatggcattccttaattctcaattcttccaacaacattgttc |
11177639 |
T |
|
| Q |
201 |
ga |
202 |
Q |
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|| |
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| T |
11177638 |
ga |
11177637 |
T |
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