View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21497_low_13 (Length: 210)
Name: NF21497_low_13
Description: NF21497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21497_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 46184214 - 46184038
Alignment:
| Q |
21 |
ctcctcggaatttagatatttgcccaacacctctccatacctacgataggttgaattggatttattaattattgatactgatttcatttcttccatttct |
120 |
Q |
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| T |
46184214 |
ctcctcggaatttagatatttgcccaacacctctccatacctacgataggttgaattggatttattaattaatgatactgatttcatttcttccatttct |
46184115 |
T |
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| Q |
121 |
ttgctatagtattattgtttatgcaaatctaagcttaattattaaacttatggtggacaggtaagtaatattatatt |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
46184114 |
ttgctatagtattattgtttatgcaaatctaagcttaattattaaatttatggtggacaggtaagtaatattatatt |
46184038 |
T |
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