View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21500_high_2 (Length: 336)

Name: NF21500_high_2
Description: NF21500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21500_high_2
NF21500_high_2
[»] chr2 (22 HSPs)
chr2 (93-336)||(18560396-18560642)
chr2 (14-91)||(18560816-18560893)
chr2 (164-215)||(16192593-16192644)
chr2 (116-216)||(18509521-18509621)
chr2 (126-217)||(981059-981149)
chr2 (111-210)||(8185251-8185350)
chr2 (158-215)||(27848006-27848063)
chr2 (108-215)||(30714147-30714253)
chr2 (158-215)||(980944-981000)
chr2 (158-215)||(20972396-20972453)
chr2 (108-217)||(26403029-26403138)
chr2 (158-215)||(27847882-27847939)
chr2 (160-215)||(39786341-39786396)
chr2 (158-216)||(4921193-4921251)
chr2 (126-216)||(37897599-37897689)
chr2 (176-217)||(4921355-4921396)
chr2 (160-216)||(12874704-12874760)
chr2 (176-216)||(35926748-35926788)
chr2 (111-215)||(39751274-39751377)
chr2 (159-216)||(37897727-37897784)
chr2 (163-215)||(35926903-35926955)
chr2 (93-204)||(43130251-43130363)
[»] chr8 (17 HSPs)
chr8 (111-215)||(27503617-27503721)
chr8 (93-217)||(37037213-37037336)
chr8 (158-215)||(31212338-31212395)
chr8 (129-216)||(9861592-9861679)
chr8 (93-215)||(14148795-14148916)
chr8 (129-216)||(6906288-6906374)
chr8 (126-216)||(8791734-8791824)
chr8 (108-216)||(14148420-14148527)
chr8 (159-215)||(33892061-33892117)
chr8 (158-216)||(6906447-6906505)
chr8 (129-215)||(33892181-33892267)
chr8 (163-216)||(31212463-31212516)
chr8 (158-216)||(39484730-39484787)
chr8 (123-216)||(5879899-5879991)
chr8 (176-216)||(27503450-27503490)
chr8 (93-209)||(29242781-29242897)
chr8 (171-215)||(31943181-31943225)
[»] chr3 (18 HSPs)
chr3 (93-216)||(2928118-2928241)
chr3 (114-216)||(30172095-30172196)
chr3 (158-215)||(44094316-44094373)
chr3 (108-216)||(25799449-25799554)
chr3 (108-215)||(45405025-45405131)
chr3 (144-217)||(30430293-30430366)
chr3 (93-205)||(45404832-45404942)
chr3 (93-180)||(2928458-2928545)
chr3 (158-216)||(34502626-34502684)
chr3 (93-206)||(28725621-28725732)
chr3 (158-215)||(41993150-41993207)
chr3 (159-215)||(4304168-4304224)
chr3 (164-216)||(27614038-27614090)
chr3 (160-215)||(8896043-8896098)
chr3 (158-208)||(10821862-10821912)
chr3 (158-216)||(30173626-30173684)
chr3 (163-216)||(4475282-4475335)
chr3 (188-217)||(32618990-32619019)
[»] chr4 (19 HSPs)
chr4 (116-217)||(17431092-17431193)
chr4 (108-215)||(33752659-33752764)
chr4 (95-217)||(17430736-17430859)
chr4 (93-217)||(17615620-17615743)
chr4 (93-214)||(17250488-17250609)
chr4 (108-215)||(33752327-33752432)
chr4 (159-216)||(13552837-13552894)
chr4 (109-215)||(17173980-17174085)
chr4 (123-217)||(54164489-54164583)
chr4 (163-216)||(34665004-34665057)
chr4 (159-215)||(28687486-28687542)
chr4 (163-215)||(34665157-34665209)
chr4 (159-215)||(53343730-53343786)
chr4 (129-216)||(54164611-54164698)
chr4 (113-215)||(17168408-17168509)
chr4 (129-215)||(28687606-28687692)
chr4 (170-215)||(17250901-17250946)
chr4 (161-217)||(7513550-7513606)
chr4 (160-215)||(32186643-32186698)
[»] chr7 (18 HSPs)
chr7 (116-216)||(29635259-29635358)
chr7 (94-214)||(20164645-20164765)
chr7 (93-216)||(29635612-29635735)
chr7 (129-216)||(7760742-7760829)
chr7 (93-216)||(35304159-35304282)
chr7 (158-216)||(19105428-19105486)
chr7 (158-216)||(37081268-37081326)
chr7 (123-216)||(6036572-6036665)
chr7 (159-216)||(9686460-9686517)
chr7 (93-217)||(4099510-4099633)
chr7 (158-217)||(7760631-7760690)
chr7 (158-216)||(3555389-3555446)
chr7 (158-216)||(23797218-23797276)
chr7 (129-215)||(31198443-31198528)
chr7 (95-214)||(35303880-35303999)
chr7 (158-216)||(20165015-20165073)
chr7 (158-216)||(21657473-21657531)
chr7 (164-217)||(8104657-8104710)
[»] chr6 (10 HSPs)
chr6 (109-217)||(24704330-24704438)
chr6 (108-218)||(30519702-30519812)
chr6 (160-216)||(6190593-6190648)
chr6 (108-216)||(7359544-7359651)
chr6 (158-216)||(34637598-34637656)
chr6 (158-215)||(13340468-13340525)
chr6 (158-215)||(13340617-13340674)
chr6 (158-216)||(12290004-12290062)
chr6 (111-216)||(24704709-24704814)
chr6 (158-215)||(34637450-34637506)
[»] chr1 (14 HSPs)
chr1 (108-215)||(35294358-35294465)
chr1 (126-206)||(16706477-16706557)
chr1 (126-217)||(16706358-16706449)
chr1 (158-216)||(13765580-13765638)
chr1 (129-216)||(30748975-30749062)
chr1 (129-216)||(30770426-30770513)
chr1 (108-206)||(8819316-8819413)
chr1 (129-215)||(14760019-14760104)
chr1 (157-214)||(15393171-15393228)
chr1 (158-213)||(20171415-20171470)
chr1 (158-216)||(22679500-22679558)
chr1 (175-217)||(51900137-51900179)
chr1 (158-215)||(30746798-30746855)
chr1 (158-215)||(30768249-30768306)
[»] scaffold0042 (2 HSPs)
scaffold0042 (93-215)||(30336-30457)
scaffold0042 (108-215)||(30682-30788)
[»] chr5 (10 HSPs)
chr5 (158-216)||(25906131-25906189)
chr5 (93-216)||(12272526-12272648)
chr5 (108-217)||(38900246-38900354)
chr5 (129-217)||(22297785-22297873)
chr5 (158-217)||(15773741-15773800)
chr5 (158-216)||(20510361-20510419)
chr5 (158-215)||(20510469-20510526)
chr5 (127-216)||(22297905-22297994)
chr5 (129-212)||(25905986-25906069)
chr5 (95-153)||(2858467-2858525)
[»] scaffold0577 (1 HSPs)
scaffold0577 (108-212)||(1636-1739)


Alignment Details
Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 93 - 336
Target Start/End: Complemental strand, 18560642 - 18560396
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    ||||||| || | |||||||||||||||||||||  ||||||||||||||||| ||||||||| ||| | |||||| |||||||||||||||||||||||    
T  18560642 atatgaaagttagagatgagttgactaaaaagtatggactaatctcatggatgaaaaatttcactgg-atcaaaagtctaaggaatattttaaggagact 18560544  T
Q  193 aaaatcaaatgttgatatattta-gacccatttatttattcagcgctaannnnnnnnagtaagat--gatcgtgattttgtttgaaaatacaaaac-ttc 288  Q
    ||||||||||||||||||||||| |  ||||||||||||| | | ||||        |||| |||  |   || |||||||||||||||||||||| |||    
T  18560543 aaaatcaaatgttgatatatttagggaccatttatttatttaacactaatttgttttagtaggattggtaagtaattttgtttgaaaatacaaaactttc 18560444  T
Q  289 tgcactgaacttttctaatggttcagtttgagacaaactattaacatt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18560443 tgcactgaacttttctaatggttcagtttgagacaaactattaacatt 18560396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 18560893 - 18560816
Alignment:
Q  14 ttctcaatacaaactcaccttcatgcctagtgtgggtcttgcgttcaattcacacattgtagtctttaatccggcttt 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18560893 ttctcaatacaaactcaccttcatgcctagtgtgggtcttgcgttcaattcacacattgtagtctttaatccgacttt 18560816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 16192593 - 16192644
Alignment:
Q  164 aaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16192593 aaaagcctaaggaatattttagggagactaaaatcaaatgttgatatattta 16192644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 18509621 - 18509521
Alignment:
Q  116 actaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||||||||||||| | |  ||||||||||||    |||||||||| || |||||||||||||  | |||||||||||||||||| ||||||||    
T  18509621 actaaaaagtagagactaattttacagatggaaaattttggagggaccaaaaaccaaaggaatattttagagggactaaaatcaaatgttggtatattta 18509522  T
Q  216 g 216  Q
    |    
T  18509521 g 18509521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 981059 - 981149
Alignment:
Q  126 agagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttaga 217  Q
    |||||||||| ||||  ||| ||||||| |  |||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||||||    
T  981059 agagactaatttcataaatgaaaaattttagagggaccaaaagcctaaagaatatttt-aggggactaaaatcaaatgttggtatatttaga 981149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 8185350 - 8185251
Alignment:
Q  111 agttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatat 210  Q
    ||||||||||||||||| ||| ||  |||||||||||||||||     |||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  8185350 agttgactaaaaagtagggaccaacttcatggatggaaaattttgaatggaccaaaagcctaaataatattttagggggactaaaatcaaatgtttatat 8185251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 27848006 - 27848063
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||||    
T  27848006 gggaccaaaagcttaagtaatattttaaagagactaaaatcaaatgttggtatattta 27848063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 30714253 - 30714147
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    |||||||||||||||| ||  ||||||| |||| ||| ||||||||    || || ||||| ||||  ||||||||||| ||||||||||||||||||||    
T  30714253 atgagttgactaaaaattaaggactaatttcatagatagaaaattttga-ggaacaaaaaggctaaaaaatattttaagaagactaaaatcaaatgttga 30714155  T
Q  208 tatattta 215  Q
    ||||||||    
T  30714154 tatattta 30714147  T

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Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 981000 - 980944
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||||||||||||||| |||||||||  | |||||||||||||||||||||||||||    
T  981000 gggaccaaaagcctaagaaatattttagag-gactaaaatcaaatgttgatatattta 980944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 20972396 - 20972453
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||| |||||| ||||||||  || |||||||||||||||||||||||||||    
T  20972396 gggaccaaaaacctaagaaatattttttggggactaaaatcaaatgttgatatattta 20972453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 26403138 - 26403029
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    |||||||||||||||||||  || |||| ||||  ||| ||||||| |    |||||||||||| | |||||||||| || |||||||||||||| || |    
T  26403138 atgagttgactaaaaagtatggattaatttcattaatgaaaaattttagacagaccaaaagcctgaagaatattttagggggactaaaatcaaattttaa 26403039  T
Q  208 tatatttaga 217  Q
    ||||||||||    
T  26403038 tatatttaga 26403029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 27847939 - 27847882
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||| | ||||||||||||||||  |||||||||||||||||| ||||||||    
T  27847939 gggaccaaaaacttaaggaatattttaagtggactaaaatcaaatgttggtatattta 27847882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 39786396 - 39786341
Alignment:
Q  160 gaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||||||| |||||||| ||||||  |||||||||||||||||||| ||||||||    
T  39786396 gaccaaaagtctaaggaaaattttagcgagactaaaatcaaatgttggtatattta 39786341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 4921251 - 4921193
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||||| |||||||||||||||||  | ||||||||||| ||| |||||||||    
T  4921251 gggaccaaaagcttaaggaatattttaagggaattaaaatcaaatattggtatatttag 4921193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 37897689 - 37897599
Alignment:
Q  126 agagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||| ||||||||| ||| ||| |  |||||| ||| ||||||||||||||||  | || ||||||||||||||| | |||||||    
T  37897689 agagactaatttcatggatgaaaatttttagagggaccgaaaacctaaggaatattttagagggagtaaaatcaaatgttggtctatttag 37897599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 4921355 - 4921396
Alignment:
Q  176 aatattttaaggagactaaaatcaaatgttgatatatttaga 217  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  4921355 aatattttaaggggattaaaatcaaatgttgatatatttaga 4921396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 12874760 - 12874704
Alignment:
Q  160 gaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||||| |||||| ||||||||| | ||| |||||||||||||| |||||||||    
T  12874760 gaccaaaagtctaagggatattttaaagggaccaaaatcaaatgttggtatatttag 12874704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 35926788 - 35926748
Alignment:
Q  176 aatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  35926788 aatattttatggagactaaaatcaaatgttggtatatttag 35926748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 39751377 - 39751274
Alignment:
Q  111 agttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaa-gcctaaggaatattttaaggagactaaaatcaaatgttgata 209  Q
    ||||||||||||||||   |||||| ||||  ||| |||||||  | |||||||||| |  |||||||||||||||||  ||||||||||||| ||| ||    
T  39751377 agttgactaaaaagtaagaactaatttcatatatgaaaaattt--tggggaccaaaaagtttaaggaatattttaagggaactaaaatcaaatattggta 39751280  T
Q  210 tattta 215  Q
    ||||||    
T  39751279 tattta 39751274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 37897727 - 37897784
Alignment:
Q  159 ggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||||||||| ||||||||| |  ||||||||  |||||||| |||||||||    
T  37897727 ggaccaaaagcctaagaaatattttaggaggactaaaacaaaatgttggtatatttag 37897784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 35926903 - 35926955
Alignment:
Q  163 caaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||| |||||  |||||||||  |||||||||||||||||||| ||||||||    
T  35926903 caaaaacctaaaaaatattttattgagactaaaatcaaatgttggtatattta 35926955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 43130251 - 43130363
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagag-actaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagac 191  Q
    |||||||||| | | |||| |||| |||||| ||| | |||||| ||||| |||||||||||    |||||||||||||||||||| |||||   | |||    
T  43130251 atatgaaggttagacatgaattgattaaaaattaggggactaatttcatgaatggaaaattttggagggaccaaaagcctaaggaaaattttggagggac 43130350  T
Q  192 taaaatcaaatgt 204  Q
    | |||||||||||    
T  43130351 tgaaatcaaatgt 43130363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 27503617 - 27503721
Alignment:
Q  111 agttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatat 210  Q
    ||||||| |||||||||| ||| || ||||| ||| |||||||||  ||||||||||||||||  ||||||||| ||| ||||||||||||| |||||||    
T  27503617 agttgacgaaaaagtagaaactgatttcatgaatgaaaaatttcagagggaccaaaagcctaaataatattttatggaaactaaaatcaaatattgatat 27503716  T
Q  211 attta 215  Q
    |||||    
T  27503717 attta 27503721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 93 - 217
Target Start/End: Original strand, 37037213 - 37037336
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    |||||||||| | | |||||||||||||||||||  || |||| ||||||||| ||||||| |  |||||||||||  ||||||||||||||  | ||||    
T  37037213 atatgaaggttagacatgagttgactaaaaagtatggattaatttcatggatgaaaaattttaa-gggaccaaaagtataaggaatattttagagggact 37037311  T
Q  193 aaaatcaaatgttgatatatttaga 217  Q
    ||||||||||||||  |||||||||    
T  37037312 aaaatcaaatgttggaatatttaga 37037336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 31212395 - 31212338
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  31212395 gggaccaaaagcctaaagaatattttatggggactaaaatcaaatgttgatatattta 31212338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 9861679 - 9861592
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||| ||||  ||| ||||||| |  |||||||||||||||| ||||||||||  | ||||||||||||||||||||||||||||    
T  9861679 gactaatttcataaatgaaaaattttagagggaccaaaagcctaaagaatattttatagggactaaaatcaaatgttgatatatttag 9861592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 14148795 - 14148916
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattg-ggaccaaaagcctaaggaatattttaaggagac 191  Q
    |||||||||| | | |||||||||||||||||||| | ||||| ||||  ||| |||||||  | | |||||||||||||||  ||||| ||| || |||    
T  14148795 atatgaaggttagacatgagttgactaaaaagtagggtctaatttcatatatgaaaaattt--tggaggaccaaaagcctaaaaaatatgttagggggac 14148892  T
Q  192 taaaatcaaatgttgatatattta 215  Q
    ||||||||||||||| ||||||||    
T  14148893 taaaatcaaatgttggtatattta 14148916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 6906374 - 6906288
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||| ||||||||| |||||||     |||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||    
T  6906374 gactaatttcatggatgaaaaattttggaaggaccaaaagcctaaggaatattttatggggact-aaatcaaatgttggtatatttag 6906288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 8791824 - 8791734
Alignment:
Q  126 agagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||| |||| |||| ||||||| |  |||||||||| |||||  ||||||||  || || |||||||||||||||||||||||||    
T  8791824 agagactaatttcatagatgaaaaattttagagggaccaaaaacctaacaaatattttggggtgagtaaaatcaaatgttgatatatttag 8791734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 14148527 - 14148420
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    |||||||||||||||| ||  ||||||| |||| |||| ||| ||| |  || || |||| |||||| ||||||||| |  |||||||||||||||||||    
T  14148527 atgagttgactaaaaaatatggactaatttcatagatgaaaatttttag-ggaactaaaaacctaagaaatattttaggaggactaaaatcaaatgttga 14148429  T
Q  208 tatatttag 216  Q
    |||||||||    
T  14148428 tatatttag 14148420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 33892117 - 33892061
Alignment:
Q  159 ggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||    
T  33892117 ggaccaaaaacctaaagaatattttgaggggactaaaatcaaatgttggtatattta 33892061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 6906447 - 6906505
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||| |||||||||||  ||||||||| || |||||||||||||||||| |||||||||    
T  6906447 gggatcaaaagcctaaaaaatattttatggggactaaaatcaaatgttggtatatttag 6906505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 33892181 - 33892267
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||||| ||||  ||| ||||||| |  |||||||||| | ||| ||||||||||| | |||||||||||||||||| ||||||||    
T  33892181 gactaatttcataaatgaaaaattttagagggaccaaaaacataaagaatattttaaagggactaaaatcaaatgttggtatattta 33892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 31212463 - 31212516
Alignment:
Q  163 caaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||| ||||| |||||||||| || |||||||||||||||||| |||||||||    
T  31212463 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttag 31212516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 39484730 - 39484787
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||| |||||| ||||||||| ||||| |||||  ||||||||||||||||||    
T  39484730 gggaccaaaatcctaagaaatattttagggagattaaaaa-aaatgttgatatatttag 39484787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 5879991 - 5879899
Alignment:
Q  123 agtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||||||||| ||||||||| ||||| | |  |||||| ||||| |||| |||||||||   ||||||||||||||| ||  |||||||||    
T  5879991 agtagagactaatttcatggatgaaaaatgttagagggacc-aaagcttaagaaatattttagaaagactaaaatcaaatattagtatatttag 5879899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 27503490 - 27503450
Alignment:
Q  176 aatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||||| | ||||||||| |||||||||||||||||||    
T  27503490 aatattttatgaagactaaaagcaaatgttgatatatttag 27503450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 29242781 - 29242897
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    |||||||||| | | |||||||||||||||| ||  || |||| ||||| ||| ||| |||    |||||| ||| |||||| ||| |||||  | ||||    
T  29242781 atatgaaggttagacatgagttgactaaaaaatatggattaatttcatgaatgaaaatttttggagggaccgaaaacctaagaaattttttagagggact 29242880  T
Q  193 aaaatcaaatgttgata 209  Q
    |||||||||||||||||    
T  29242881 aaaatcaaatgttgata 29242897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 31943181 - 31943225
Alignment:
Q  171 taaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||| |||||||||||   ||||||||||||||||||||||||||    
T  31943181 taagaaatattttaagagaactaaaatcaaatgttgatatattta 31943225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 2928241 - 2928118
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    |||||||||| | | |||||||||||||||| ||  ||||||| ||||| |||||||||||    |||||||||||||||||||| ||||||  | ||||    
T  2928241 atatgaaggttagacatgagttgactaaaaattatggactaatttcatgaatggaaaattttggagggaccaaaagcctaaggaaaattttagagggact 2928142  T
Q  193 aaaatcaaatgttgatatatttag 216  Q
    | |||||||||||| |||||||||    
T  2928141 agaatcaaatgttggtatatttag 2928118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 30172196 - 30172095
Alignment:
Q  114 tgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatt 213  Q
    |||||||||| ||||||||||| ||||||||| |||||||  |    ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||    
T  30172196 tgactaaaaattagagactaatttcatggatgaaaaattttgtaaa-accaaaaacctaaagaatattttaaggggactaaaatcaaatgttgatatatt 30172098  T
Q  214 tag 216  Q
    |||    
T  30172097 tag 30172095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 44094316 - 44094373
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  44094316 gggaccaaaaccctaagaaatattttcaggagactaaaatcaaatgttgatatattta 44094373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 25799449 - 25799554
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    |||||||||||||||||||| || |||| ||| ||||| |||||||    ||||||||||| |||  ||||||||||| ||||||||||| ||||||||     
T  25799449 atgagttgactaaaaagtagggattaatttcacggatg-aaaattttgcagggaccaaaagtcta--gaatattttaaagagactaaaattaaatgttgg 25799545  T
Q  208 tatatttag 216  Q
    |||||||||    
T  25799546 tatatttag 25799554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 45405025 - 45405131
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    |||||||||||||||||||  ||||||| |||| |||  |||||||    ||||| |||||||||| |||||||||| || |||||||||||||||||      
T  45405025 atgagttgactaaaaagtatggactaatttcatagata-aaaattttggagggactaaaagcctaaagaatattttagggggactaaaatcaaatgttag 45405123  T
Q  208 tatattta 215  Q
    ||||||||    
T  45405124 tatattta 45405131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 30430366 - 30430293
Alignment:
Q  144 tggaaaatttcattgggaccaaaagcctaaggaatatttta-aggagactaaaatcaaatgttgatatatttaga 217  Q
    |||||||||| |  |||||||||||||||| |||||||||| |||| ||||||||||||||||| ||||||||||    
T  30430366 tggaaaattttagagggaccaaaagcctaaagaatattttagagga-actaaaatcaaatgttggtatatttaga 30430293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 45404942 - 45404832
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    |||||||||| | | ||||||||||| |||||||  ||||||| | ||||||||||  ||  |  ||||||| ||  ||||||||||||||| |||||||    
T  45404942 atatgaaggttagacatgagttgactgaaaagtaaggactaattttatggatggaattttgga--gggaccagaaatctaaggaatattttagggagact 45404845  T
Q  193 aaaatcaaatgtt 205  Q
    |||||||||||||    
T  45404844 aaaatcaaatgtt 45404832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 2928458 - 2928545
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatat 180  Q
    |||||||||| | | ||||||||| |||||||||  || |||| |||| ||| |||||||| | |||||||||||| |||||||||||    
T  2928458 atatgaaggttagacatgagttgaataaaaagtaaggattaatttcatagatagaaaattttagtgggaccaaaagtctaaggaatat 2928545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 34502684 - 34502626
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||| ||||||||||  |||||||||  | ||||||||||||||||||||||||||||    
T  34502684 gggacgaaaagcctaaaaaatattttatagggactaaaatcaaatgttgatatatttag 34502626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 28725621 - 28725732
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    |||||||||| | | ||||||||||||||||  | |||||||| ||||||||| ||  |||    |||||||||| ||||| |||||||||  |||||||    
T  28725621 atatgaaggttagacatgagttgactaaaaaaaa-agactaatttcatggatgaaattttttggagggaccaaaaacctaatgaatattttg-ggagact 28725718  T
Q  193 aaaatcaaatgttg 206  Q
    ||||||||||||||    
T  28725719 aaaatcaaatgttg 28725732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 41993150 - 41993207
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||| |||||||||||  ||||||||| ||||| ||||||||||| ||||||||||||    
T  41993150 gggatcaaaagcctaaaaaatattttagggagattaaaatcaaatattgatatattta 41993207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 4304224 - 4304168
Alignment:
Q  159 ggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||||||||| |||| ||||||||| |  |||||||||||||||||| ||||||||    
T  4304224 ggaccaaaagcttaagaaatattttaggaggactaaaatcaaatgttggtatattta 4304168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 27614090 - 27614038
Alignment:
Q  164 aaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||| |||| |||||||||| |||||||||||| |||||||| |||||||||    
T  27614090 aaaagtctaaagaatattttatggagactaaaattaaatgttggtatatttag 27614038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 8896043 - 8896098
Alignment:
Q  160 gaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||| ||| |||||||||| |||||||||||| |||||||| | ||||||    
T  8896043 gaccaaaagcttaaagaatattttagggagactaaaattaaatgttggtgtattta 8896098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 10821912 - 10821862
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgat 208  Q
    ||||||||||||||||  ||||||||| || ||||||||| ||||||||||    
T  10821912 gggaccaaaagcctaaaaaatattttacggtgactaaaataaaatgttgat 10821862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 30173626 - 30173684
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||| ||||||||||| ||| |||||| || |||||||||||||| ||| |||||||||    
T  30173626 gggatcaaaagcctaaagaaaattttagggggactaaaatcaaatattggtatatttag 30173684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 4475282 - 4475335
Alignment:
Q  163 caaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||| ||||| ||| ||||||| | || |||||||||||||||||||||||||    
T  4475282 caaaaacctaaagaaaattttaaagtgattaaaatcaaatgttgatatatttag 4475335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 32618990 - 32619019
Alignment:
Q  188 agactaaaatcaaatgttgatatatttaga 217  Q
    ||||||||||||||||||||||||||||||    
T  32618990 agactaaaatcaaatgttgatatatttaga 32619019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 17431092 - 17431193
Alignment:
Q  116 actaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||||| || |||| ||||||||| ||| |||    ||||||||||||||||  ||||||||| || |||||||||||||||||||||||||||    
T  17431092 actaaaaagtagggattaatttcatggatgaaaatttttggagggaccaaaagcctaaaaaatattttagggggactaaaatcaaatgttgatatattta 17431191  T
Q  216 ga 217  Q
    ||    
T  17431192 ga 17431193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 33752659 - 33752764
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    ||||||||||||||| | || ||||||| | || ||| ||||||||    || ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  33752659 atgagttgactaaaaggcagggactaatttaatagatagaaaatttag--ggaaccaaaagcctaaagaatattttagggagactaaaatcaaatgttga 33752756  T
Q  208 tatattta 215  Q
    ||||||||    
T  33752757 tatattta 33752764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 217
Target Start/End: Complemental strand, 17430859 - 17430736
Alignment:
Q  95 atgaaggtgatagatgagttgactaaaaa-gtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagacta 193  Q
    |||||||| | | |||||||||||||||| ||| |||||||| || || |||||||||||    | || ||||||||||||||||||||||  | |||||    
T  17430859 atgaaggttaaacatgagttgactaaaaaagtaaagactaatttcttgaatggaaaattttgaagagatcaaaagcctaaggaatattttagagggacta 17430760  T
Q  194 aaatcaaatgttgatatatttaga 217  Q
    ||||||||||||| ||||||||||    
T  17430759 aaatcaaatgttggtatatttaga 17430736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 217
Target Start/End: Complemental strand, 17615743 - 17615620
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    |||||||||| | | |||| ||||||||||||||| ||||||| |||| ||||||||||||    ||||| |||||||||||  |||||||| |  ||||    
T  17615743 atatgaaggttagacatgaattgactaaaaagtagggactaatttcatagatggaaaattt-tgggggactaaaagcctaagatatattttaggaggact 17615645  T
Q  193 aaaatcaaatgttgatatatttaga 217  Q
    |||||||||| || |||||||||||    
T  17615644 aaaatcaaatattcatatatttaga 17615620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 93 - 214
Target Start/End: Complemental strand, 17250609 - 17250488
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    |||||||||| ||| ||| ||||| ||||||||| |||||||| ||||||||| ||| ||||   || |||||||  ||||| ||||||||||||  | |    
T  17250609 atatgaaggttatatatgcgttgattaaaaagtaaagactaatttcatggatgaaaattttcgagggaaccaaaaatctaagaaatattttaagggaaat 17250510  T
Q  193 aaaatcaaatgttgatatattt 214  Q
    |||||||||||||  |||||||    
T  17250509 aaaatcaaatgtttgtatattt 17250488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 33752432 - 33752327
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    |||||||||||||||| ||  ||||||| |||| |||||||||||| |  || || ||||||| ||| ||||||||| || |||||||||||||| ||||    
T  33752432 atgagttgactaaaaattaaggactaatttcatagatggaaaattttaaagg-actaaaagccaaag-aatattttagggggactaaaatcaaatattga 33752335  T
Q  208 tatattta 215  Q
    ||||||||    
T  33752334 tatattta 33752327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 13552837 - 13552894
Alignment:
Q  159 ggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||||||||  ||||||||| || |||||||||||||| |||||||||||||    
T  13552837 ggaccaaaagcctaaataatattttatggggactaaaatcaaatattgatatatttag 13552894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 17174085 - 17173980
Alignment:
Q  109 tgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgat 208  Q
    ||||||||||||||||||   | |||| |||| |||| ||| ||| |  | |||||||| |||||| ||| ||||||| |||||||||| ||||||||||    
T  17174085 tgagttgactaaaaagtaagaattaatttcattgatgaaaatttttaaagagaccaaaa-cctaagaaatgttttaagaagactaaaattaaatgttgat 17173987  T
Q  209 atattta 215  Q
    |||||||    
T  17173986 atattta 17173980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 54164583 - 54164489
Alignment:
Q  123 agtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttaga 217  Q
    ||||||||||||| ||||  ||| ||||||| |   |||||||||||||||   |||||||| |  |||||||||||||||||| ||||||||||    
T  54164583 agtagagactaatttcataaatgaaaaattttagatggaccaaaagcctaaaatatattttatgaggactaaaatcaaatgttggtatatttaga 54164489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 34665057 - 34665004
Alignment:
Q  163 caaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||  |||||||||    
T  34665057 caaaaacctaaagaatattttaaggggactaaaatcaaatgttagtatatttag 34665004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 28687542 - 28687486
Alignment:
Q  159 ggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||||||||| ||||||||||||||  |||| |||||| |||||||| ||||||||    
T  28687542 ggaccaaaagcataaggaatattttagagagattaaaattaaatgttggtatattta 28687486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 34665157 - 34665209
Alignment:
Q  163 caaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||||  ||||||||| || |||||||||||||||||| ||||||||    
T  34665157 caaaagcctaaaaaatattttagggtgactaaaatcaaatgttggtatattta 34665209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 53343786 - 53343730
Alignment:
Q  159 ggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||| ||| |||||| |||||||||| ||||||||||||||| |||| ||||||||    
T  53343786 ggacccaaaacctaagaaatattttaacgagactaaaatcaaacgttggtatattta 53343730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 54164611 - 54164698
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||| ||||  ||| ||||||| |  |||||| ||| |||||  |||||||||  |||||||||||||||||||| |||||||||    
T  54164611 gactaatttcataaatgaaaaattttagagggaccgaaaacctaaaaaatattttatagagactaaaatcaaatgttggtatatttag 54164698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 215
Target Start/End: Complemental strand, 17168509 - 17168408
Alignment:
Q  113 ttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatat 212  Q
    |||||||||||||| | | |||| |||| |||| ||| ||| |  | |||||||||| |||| ||| ||||||| |||||||||| |||| |||||||||    
T  17168509 ttgactaaaaagtaaaaattaatttcattgatgaaaatttttaaagagaccaaaagc-taagaaatgttttaagaagactaaaattaaatattgatatat 17168411  T
Q  213 tta 215  Q
    |||    
T  17168410 tta 17168408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 28687606 - 28687692
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||||| | || |||| ||||||| |  |||||||||| |||||  |||||||||  |  ||||||||||||||||||||||||||    
T  28687606 gactaattttattgatgaaaaattttagagggaccaaaaccctaaaaaatattttagagtaactaaaatcaaatgttgatatattta 28687692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 17250901 - 17250946
Alignment:
Q  170 ctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||| ||| ||||||| ||||||||||||||| ||||||||||||    
T  17250901 ctaagaaatgttttaagaagactaaaatcaaatattgatatattta 17250946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 7513606 - 7513550
Alignment:
Q  161 accaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttaga 217  Q
    |||||||||||||  ||||||||||||  | |||||| |||||||| ||||||||||    
T  7513606 accaaaagcctaaaaaatattttaaggtaattaaaattaaatgttggtatatttaga 7513550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 32186643 - 32186698
Alignment:
Q  160 gaccaaaagcctaaggaatatttta-aggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||||||| |||||||||| |||| |||||||| |||||||| ||||||||    
T  32186643 gaccaaaagcctaaagaatattttagagga-actaaaattaaatgttggtatattta 32186698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 29635358 - 29635259
Alignment:
Q  116 actaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||| ||| |||||||  |||| ||| ||||||| |  ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  29635358 actaaaaaatagggactaattacatgtatgaaaaattttagagggaccaaaagtctaaggaatatttt-aggggactaaaatcaaatgttgatatattta 29635260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 214
Target Start/End: Complemental strand, 20164765 - 20164645
Alignment:
Q  94 tatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagacta 193  Q
    ||||||||| | | |||||||||||||||||||| || |||| ||||| ||| |||||||    |||||||||| | ||||||| |||||||   |||||    
T  20164765 tatgaaggttagacatgagttgactaaaaagtagggattaatttcatgaatgaaaaattttggagggaccaaaaacttaaggaaaattttaaaatgacta 20164666  T
Q  194 aaatcaaatgttgatatattt 214  Q
    ||||||||||||| |||||||    
T  20164665 aaatcaaatgttggtatattt 20164645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 29635612 - 29635735
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggag-ac 191  Q
    |||||||||| | | |||||||||||||||||||| ||||||| | ||||||| |||| ||    |||||||||| | |||  |||||||| ||||| ||    
T  29635612 atatgaaggttagacatgagttgactaaaaagtagggactaattttatggatgtaaaactttggagggaccaaaatcttaaaaaatatttt-aggagaac 29635710  T
Q  192 taaaatcaaatgttgatatatttag 216  Q
    |||||||||||||||||||||||||    
T  29635711 taaaatcaaatgttgatatatttag 29635735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 7760742 - 7760829
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||| ||||||||| ||| |||    ||||||||||||||||| |||||||||  | |||||||||||||||||| |||||||||    
T  7760742 gactaatttcatggatgaaaatttttggagggaccaaaagcctaagaaatattttatagggactaaaatcaaatgttggtatatttag 7760829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 35304159 - 35304282
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    |||||||||| | | ||||||||| |||||||||  |||| || |||| |||||||||||||   | ||||||||| ||||  ||||||||| |  ||||    
T  35304159 atatgaaggttagacatgagttgattaaaaagtaaggactgatttcattgatggaaaatttcggagagaccaaaagactaactaatattttaggcggact 35304258  T
Q  193 aaaatcaaatgttgatatatttag 216  Q
    |||||||| ||||| |||||||||    
T  35304259 aaaatcaattgttggtatatttag 35304282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 19105428 - 19105486
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||| |||| |||||||||    
T  19105428 gggaccaaaagcctaaagaatagtttaaggggactaaaatcaaaagttggtatatttag 19105486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 37081268 - 37081326
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||| |||||||||||||||  || ||||||||||||| ||||||||||||||    
T  37081268 gggaccaaaaacctaaggaatatttttgggggactaaaatcaaacgttgatatatttag 37081326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 6036665 - 6036572
Alignment:
Q  123 agtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||||||||| ||||  ||| ||||||| |  | | |||||| |||||  | |||||||||| ||||||||||||||||||||||||||||    
T  6036665 agtagagactaatttcataaatgaaaaattttagagaggccaaaaacctaaaaactattttaaggggactaaaatcaaatgttgatatatttag 6036572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 9686460 - 9686517
Alignment:
Q  159 ggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||||||||  ||||||||| || |||||||||||||| |||||||||||||    
T  9686460 ggaccaaaagcctaaataatattttatggggactaaaatcaaatattgatatatttag 9686517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 217
Target Start/End: Original strand, 4099510 - 4099633
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    |||||||||| | | ||||||||| ||||||||| | |||||| | ||||||||| |||||    ||||| ||||   ||| ||||||||||||| ||||    
T  4099510 atatgaaggttagacatgagttgaataaaaagtaaatactaatgttatggatggataatttttgagggactaaaaatttaaagaatattttaagg-gact 4099608  T
Q  193 aaaatcaaatgttgatatatttaga 217  Q
    ||||||||||||| ||| |||||||    
T  4099609 aaaatcaaatgttaatagatttaga 4099633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 7760690 - 7760631
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttaga 217  Q
    |||||||||||||||| |||||||||| || ||||||||||| ||| || ||||||||||    
T  7760690 gggaccaaaagcctaaagaatattttagggggactaaaatcatatgctggtatatttaga 7760631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 3555446 - 3555389
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||| |||||| ||||||||| || |||||||||||||||||| |||||||||    
T  3555446 gggaccaaaa-cctaagaaatattttagggggactaaaatcaaatgttggtatatttag 3555389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 23797218 - 23797276
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||||||  ||||| |||||||||  | ||||||||||||||||||||||||||||    
T  23797218 gggaccaaaaatctaagaaatattttagagggactaaaatcaaatgttgatatatttag 23797276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 31198443 - 31198528
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggag-actaaaatcaaatgttgatatattta 215  Q
    ||||||| |||| |||| ||||||| |  ||| ||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||    
T  31198443 gactaatttcatagatgaaaaattttagaggg-ccaaaagcctaagaaatatttt-aggagaactaaaatcaaatgttggtatattta 31198528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 214
Target Start/End: Complemental strand, 35303999 - 35303880
Alignment:
Q  95 atgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaa 194  Q
    |||||||| | | |||||||| ||||||||||  ||||||| |||||||| |||| ||| |  |||||||||| ||| |  ||||||| | ||  |||||    
T  35303999 atgaaggttagacatgagttgtctaaaaagtacggactaatttcatggattgaaagttttagagggaccaaaaacctcaaaaatatttaaggggaactaa 35303900  T
Q  195 aatcaaatgttgatatattt 214  Q
    ||| |||| |||||||||||    
T  35303899 aattaaatattgatatattt 35303880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 20165015 - 20165073
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||| ||||| ||||| ||||||||||  | |||||||||||||||||| |||||||||    
T  20165015 gggatcaaaaacctaatgaatattttagagggactaaaatcaaatgttggtatatttag 20165073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 21657473 - 21657531
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||| ||||||| ||||||||||||||||| | |||| ||||||||||  |||||||||    
T  21657473 gggatcaaaagcgtaaggaatattttaagggggctaatatcaaatgttagtatatttag 21657531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 8104710 - 8104657
Alignment:
Q  164 aaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttaga 217  Q
    ||||||||||  |||||| ||| | |||| ||||||||||||||||||||||||    
T  8104710 aaaagcctaaaaaatattgtaaagggactgaaatcaaatgttgatatatttaga 8104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 24704438 - 24704330
Alignment:
Q  109 tgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgat 208  Q
    |||||| |||||||| ||| ||||||| |||| | |||||||||| |  |||||||||||| |||  ||||||||| ||||||||||||||||| ||| |    
T  24704438 tgagtttactaaaaattagggactaatttcatagttggaaaattttagagggaccaaaagcataaataatattttagggagactaaaatcaaatattggt 24704339  T
Q  209 atatttaga 217  Q
    |||||||||    
T  24704338 atatttaga 24704330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 30519812 - 30519702
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    |||| |||||||||| |||  ||||||| ||||||||| ||||||| |  |||||||||| | |||  |||||||||| |||| |||||||||||||||     
T  30519812 atgaattgactaaaatgtatggactaatttcatggatgaaaaattttagagggaccaaaaacttaaataatattttaaagagattaaaatcaaatgttgg 30519713  T
Q  208 tatatttagac 218  Q
    |||||||||||    
T  30519712 tatatttagac 30519702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 6190648 - 6190593
Alignment:
Q  160 gaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  6190648 gaccaaaaacctaagaaatattt-aaggagactaaaatcaaatgttgatatatttag 6190593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 7359544 - 7359651
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    ||||||||| |||||| ||| || |||| |||| ||||||||||||    |||| |||||||||||  ||||||||| || || |||||||||||||||     
T  7359544 atgagttgattaaaaattagggattaatttcatagatggaaaattttgg-gggatcaaaagcctaaataatattttagggggagtaaaatcaaatgttgg 7359642  T
Q  208 tatatttag 216  Q
    |||||||||    
T  7359643 tatatttag 7359651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 34637598 - 34637656
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||| ||| | |||||||||| ||  |||||||||||||||||||||||||||    
T  34637598 gggaccaaaaacctcaagaatattttaggggaactaaaatcaaatgttgatatatttag 34637656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 13340525 - 13340468
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||||||||| |||| |||||  | |||||||||||||||||| ||||||||    
T  13340525 gggaccaaaagcctaaagaatgttttatagggactaaaatcaaatgttggtatattta 13340468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 13340617 - 13340674
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||||||||| ||||| |||||||||| || |||||||||||||||||  ||||||||    
T  13340617 gggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttagtatattta 13340674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 12290062 - 12290004
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||| ||||| |||| ||||||||||| | || |||||||||||||||| |||||||||    
T  12290062 gggatcaaaaacctagggaatattttaggcaggctaaaatcaaatgttggtatatttag 12290004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 24704709 - 24704814
Alignment:
Q  111 agttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatat 210  Q
    |||| |||||||| ||||||||||| | || | ||||||||||    ||||| ||||   ||| |||||||||| ||  ||||||||||||| |||||||    
T  24704709 agtttactaaaaattagagactaattttatagttggaaaattttggagggactaaaaatttaaagaatattttaggggaactaaaatcaaatattgatat 24704808  T
Q  211 atttag 216  Q
    ||||||    
T  24704809 atttag 24704814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 34637506 - 34637450
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||||||||| || | |||||||||| || |||||||||||||||||| ||||||||    
T  34637506 gggaccaaaagtctcaagaatattttaggg-gactaaaatcaaatgttggtatattta 34637450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 35294465 - 35294358
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||||||    |||||||||||||| || ||||||||     |||||||||||||||||||    
T  35294465 atgagttgactaaaaagtatagactaatttcatgaatgtaaaattttggagggaccaaaagcctcagaaatattttcgatggactaaaatcaaatgttga 35294366  T
Q  208 tatattta 215  Q
    ||||||||    
T  35294365 tatattta 35294358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 16706477 - 16706557
Alignment:
Q  126 agagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttg 206  Q
    |||||||||| | || |||||||||||| |  |||||||||| ||||| |||||||||| || ||||||||||||||||||    
T  16706477 agagactaatttgatagatggaaaattttagagggaccaaaaacctaaagaatattttagggggactaaaatcaaatgttg 16706557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 16706449 - 16706358
Alignment:
Q  126 agagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttaga 217  Q
    |||||||||| |||| |||| ||||||| |   ||||||||||||||| ||| ||||||  | |||||||||||||||||| ||||||||||    
T  16706449 agagactaatttcatagatgaaaaattttagaaggaccaaaagcctaaagaaaattttagagggactaaaatcaaatgttggtatatttaga 16706358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 13765638 - 13765580
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||| ||||| |||||||||| || |||||||||||||||||| |||||||||    
T  13765638 gggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttag 13765580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 30749062 - 30748975
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||| |||| |||| |||||||    |||||||||||||||| |||||||||| || |||||||||||||| ||  |||||||||    
T  30749062 gactaatttcatagatgaaaaattttgaagggaccaaaagcctaaagaatattttagggggactaaaatcaaatatttgtatatttag 30748975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 30770513 - 30770426
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||| |||| |||| |||||||    |||||||||||||||| |||||||||| || |||||||||||||| ||  |||||||||    
T  30770513 gactaatttcatagatgaaaaattttgaagggaccaaaagcctaaagaatattttagggggactaaaatcaaatatttgtatatttag 30770426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 8819316 - 8819413
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttg 206  Q
    ||||||||||||||||| |  ||||||| | || |||| |||||||    ||| |||||| |||||||||||||||| ||| |||||||||||||||||    
T  8819316 atgagttgactaaaaagcaaggactaatttaattgatgaaaaattttggaggg-ccaaaaacctaaggaatattttatggatactaaaatcaaatgttg 8819413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 14760019 - 14760104
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||||| |||| |||| ||||||| |  ||||||||||||||||  ||||||||| || || ||||||||||||||| ||||||||    
T  14760019 gactaatttcatagatgaaaaattttag-gggaccaaaagcctaaaaaatattttagggggattaaaatcaaatgttggtatattta 14760104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 15393228 - 15393171
Alignment:
Q  157 tgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattt 214  Q
    |||||||||||||||||||||||||||| || ||| ||||| |||| ||| |||||||    
T  15393228 tgggaccaaaagcctaaggaatattttagggggacgaaaattaaatattggtatattt 15393171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 20171470 - 20171415
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatt 213  Q
    ||||||||||| ||||| |||||||||  | |||||||||||||||||| ||||||    
T  20171470 gggaccaaaagtctaagaaatattttagagggactaaaatcaaatgttggtatatt 20171415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 22679500 - 22679558
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||| |||||  |||||||||  | |||||||||||||||||| |||||||||    
T  22679500 gggaccaaaaacctaacaaatattttagagggactaaaatcaaatgttggtatatttag 22679558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 51900179 - 51900137
Alignment:
Q  175 gaatattttaaggagactaaaatcaaatgttgatatatttaga 217  Q
    |||||||||||||| |||||||||||||||||  |||||||||    
T  51900179 gaatattttaaggaaactaaaatcaaatgttggaatatttaga 51900137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 30746855 - 30746798
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||| |||| ||||| |||||||||||||| ||||||||||||| ||  ||||||||    
T  30746855 gggacaaaaaacctaaagaatattttaaggaaactaaaatcaaatattagtatattta 30746798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 30768306 - 30768249
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    ||||| |||| ||||| |||||||||||||| ||||||||||||| ||  ||||||||    
T  30768306 gggacaaaaaacctaaagaatattttaaggaaactaaaatcaaatattagtatattta 30768249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 215
Target Start/End: Complemental strand, 30457 - 30336
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattg-ggaccaaaagcctaaggaatattttaaggagac 191  Q
    |||||||||| | | |||||||||||||||||||  ||||||| |||| ||||  ||||||  | | ||||||||||| |||| |||||||| |||||||    
T  30457 atatgaaggttagacatgagttgactaaaaagtattgactaatttcattgatg--aaattttttagaggaccaaaagcttaagtaatatttttaggagac 30360  T
Q  192 taaaatcaaatgttgatatattta 215  Q
    ||||||||||||||  ||||||||    
T  30359 taaaatcaaatgttagtatattta 30336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 30682 - 30788
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    |||||||||||||||||||| ||||||| | ||||||| ||| ||| |  || ||||||| | |||  |||||||| |||||||||||||||||||||      
T  30682 atgagttgactaaaaagtagggactaatttgatggatgaaaatttttagagg-accaaaaacttaaataatatttttaggagactaaaatcaaatgttat 30780  T
Q  208 tatattta 215  Q
    ||||||||    
T  30781 tatattta 30788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 25906131 - 25906189
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    |||||||||||||||| |||||||| | || ||||||||||||||||||||||||||||    
T  25906131 gggaccaaaagcctaaagaatatttaagggggactaaaatcaaatgttgatatatttag 25906189  T

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Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 12272648 - 12272526
Alignment:
Q  93 atatgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagact 192  Q
    |||||||||| | | || |||||||||||||||||| |||||| ||||||||| ||| |||  |  ||| ||||| |||||  | |||||||  ||||||    
T  12272648 atatgaaggttaaacataagttgactaaaaagtagaaactaatttcatggatg-aaatttttttaaggatcaaaaacctaaaaattattttagagagact 12272550  T
Q  193 aaaatcaaatgttgatatatttag 216  Q
    |||||||||||||| |||||||||    
T  12272549 aaaatcaaatgttggtatatttag 12272526  T

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Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 38900354 - 38900246
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||  |||   ||| ||||||||| |||  |||||||| ||||||||||||| |||| |||     
T  38900354 atgagttgactaaaaagtagagattaatttcatgaatgaaattttttggtggaaccaaaagcataaaaaatatttt-aggagactaaaataaaatattgg 38900256  T
Q  208 tatatttaga 217  Q
    ||||||||||    
T  38900255 tatatttaga 38900246  T

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Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 22297873 - 22297785
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttaga 217  Q
    ||||||| |||| ||||  |||||| |  |||||||||| |||||  |||||||||  | |||||||||||||||||||||||||||||    
T  22297873 gactaatttcatagatgagaaattttaaagggaccaaaaacctaaaaaatattttagagggactaaaatcaaatgttgatatatttaga 22297785  T

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Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 15773741 - 15773800
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttaga 217  Q
    |||||||||||||||||| |||||||| | ||||||||||||| ||||  ||||||||||    
T  15773741 gggaccaaaagcctaagggatattttaggaagactaaaatcaattgttagtatatttaga 15773800  T

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Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 20510419 - 20510361
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||| |||| ||||| ||||||||| ||| ||||||||||||||||| ||||||||||    
T  20510419 gggactaaaaacctaaagaatatttttaggggactaaaatcaaatgttaatatatttag 20510361  T

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Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 20510469 - 20510526
Alignment:
Q  158 gggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatattta 215  Q
    |||| |||||||||||  |||||||||| | ||||||||||||||||| |||||||||    
T  20510469 gggatcaaaagcctaaaaaatattttaatgggactaaaatcaaatgtttatatattta 20510526  T

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Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 22297905 - 22297994
Alignment:
Q  127 gagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatatttag 216  Q
    ||||||||| ||||  ||| ||||||| |  |||||||||| | |||  |||||||||||| |||||||||||||||||  |||||||||    
T  22297905 gagactaatttcataaatgaaaaattttagagggaccaaaaacttaaaaaatattttaaggggactaaaatcaaatgttagtatatttag 22297994  T

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Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 25906069 - 25905986
Alignment:
Q  129 gactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttgatatat 212  Q
    ||||||| | || |||| ||||||| |  ||||||||||||||| | |||| |||| || |||||||||||||||||| |||||    
T  25906069 gactaattttatagatgaaaaattttagagggaccaaaagcctatgaaatactttagggggactaaaatcaaatgttggtatat 25905986  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 2858525 - 2858467
Alignment:
Q  95 atgaaggtgatagatgagttgactaaaaagtagagactaatctcatggatggaaaattt 153  Q
    |||||||| | | |||||||||| ||||||||  ||||||| |||||||||||||||||    
T  2858525 atgaaggttacacatgagttgacaaaaaagtatggactaatttcatggatggaaaattt 2858467  T

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Target: scaffold0577 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 1739 - 1636
Alignment:
Q  108 atgagttgactaaaaagtagagactaatctcatggatggaaaatttcattgggaccaaaagcctaaggaatattttaaggagactaaaatcaaatgttga 207  Q
    |||||||||||||||| || |||||||| ||||| ||| ||| |||    ||||||||||||||||  |||||||||  | ||||||||| |||| ||||    
T  1739 atgagttgactaaaaaatatagactaatttcatgaatgaaaatttttgaagggaccaaaagcctaattaatattttagagggactaaaat-aaattttga 1641  T
Q  208 tatat 212  Q
    |||||    
T  1640 tatat 1636  T

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