View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21500_low_1 (Length: 256)
Name: NF21500_low_1
Description: NF21500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21500_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 22 - 244
Target Start/End: Complemental strand, 9199828 - 9199606
Alignment:
| Q |
22 |
aaggatgcattgaagaatgttcttgtgcattattaccctcttgctgggagattaagtataagctcagagggtaagctgattgtggattgtactggagaag |
121 |
Q |
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| T |
9199828 |
aaggatgcattgaagaatgttcttgtgcattattaccctcttgctgggagattaagtataagctcagagggtaagctgattgtggattgtactggagaag |
9199729 |
T |
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| Q |
122 |
gtgctctttttgttgaggctgaagctaattgttcaatggaagaaattggtgatattacaaaacctgatccaaggactcttggtatgttggtttatgatat |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9199728 |
gtgctctttttgttgaggctgaagctaattgttcaatggaagaaattggtgatattacaaaacctgatccaaggactcttggtatgttggtttatgatat |
9199629 |
T |
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| Q |
222 |
tcctgatgctaaacatattcttc |
244 |
Q |
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||||||||||||||||||||||| |
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| T |
9199628 |
tcctgatgctaaacatattcttc |
9199606 |
T |
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