View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21501_high_2 (Length: 355)
Name: NF21501_high_2
Description: NF21501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21501_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 32134925 - 32135270
Alignment:
| Q |
1 |
caatacggcggcggttgtggtggtggaaagatgaagaggtggagtcg---tcgtcgccgccgtgagagttccaatcgcagcggtgacattgaactaggtt |
97 |
Q |
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| T |
32134925 |
caatacggcggcggttgtggtggtggaaggatgaagaggtggagtcgtcgtcgtcgccgccgtgagagttccaatcgcagcggtgacattgaactaggtt |
32135024 |
T |
|
| Q |
98 |
ttcggtgaagcaacgaactgaagcggcgtcgtttttgcagttttgacagatttggaaacgcacgtgcttgagtgcgagtgcgtttgcggagtgcacgtgc |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32135025 |
ttcggtgaagcaacgaactgaagcggcgtcgtttttgcagttttgacagatttggaaacgcacgtgcttgagtgcgagtgcgtttgcggagtgcacgtgc |
32135124 |
T |
|
| Q |
198 |
tggtcgcaaactaaacagagtttcgcggagtctggtttgcaatatagcaccgcgcttcttgtgtcgcaatagtcacacggaaacgacatcgttttaggag |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32135125 |
tggtcgcaaactaaacagagtttcgcggagtctggtttgcaatatagcaccgcgcttcttgtgtcgcaatagtcacacggaaacgacatcgttttaggag |
32135224 |
T |
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| Q |
298 |
gatactttggttgtaagaaagaagaatgaagaatttaatttagtat |
343 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32135225 |
gatactttggttgtaagaaagaagaatgaagaatttaatttagtat |
32135270 |
T |
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