View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21503_high_12 (Length: 311)
Name: NF21503_high_12
Description: NF21503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21503_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 3353155 - 3353457
Alignment:
| Q |
1 |
atgcaaattaggagaaaacctctgctcaaaccataaaactaaccaaccaccttcacctcctccaccattacaaacccgaaaatgcgacacaaatccgggg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
3353155 |
atgcaaattaggagaaaacctctgctcaaaccataaaactaaccaaccaccttcacctcctccaccattacaaacccgaaaatgcgacataaatccgggg |
3353254 |
T |
|
| Q |
101 |
aagtcgttgctttcagaggagctaagagttcaaggaagattagcttttccaatggtgttgatgaatttagcttggtttgccaagacagctatcacaacag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3353255 |
aagtcgttgctttcagaggagctaagagttcaaggaagattagcttttccaatggtgttgatgaatttagcttggtttgccaagacagctatcacaacag |
3353354 |
T |
|
| Q |
201 |
cattcttgggtcgactaggtgagctcagcttagccggtggcgcactcgggttcactttcgctaacgttaccggcttctctgtcttgaatggtctctgtgg |
300 |
Q |
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||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3353355 |
cattcttgggtagactaggtgagctcaggttagccggtggcgcactcgggttcactttcgctaacgttaccggcttctctgtcttgaatggtctctgtgg |
3353454 |
T |
|
| Q |
301 |
tgc |
303 |
Q |
| |
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||| |
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| T |
3353455 |
tgc |
3353457 |
T |
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