View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21504_low_8 (Length: 267)
Name: NF21504_low_8
Description: NF21504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21504_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 7337027 - 7336794
Alignment:
| Q |
18 |
gatatgagtttgagtttatgttggattcgtttgaaagaatccgaatttgtaatttgacaaacaacttaatttaccatatgatttgatatacaaaccataa |
117 |
Q |
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| T |
7337027 |
gatatgagtttcagtttattttggat-cgtttgaaagaatccgaatttgtaatttgacaaacaacttaaattaccatatgatttgatatacaaaccataa |
7336929 |
T |
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| Q |
118 |
attctagattttaaatcaaatttctatacaccattcatataatacaaatcaagttacacaaattaatttgcctattacattaattccttgataattaaga |
217 |
Q |
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| T |
7336928 |
attctagattttaaatcaaatttctatacaccattcatataatacaaatcaagttacacaaattaatttgcctattac----attccttgataattaaga |
7336833 |
T |
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| Q |
218 |
tacactaaccaagcttttgcattgatctattttcttcga |
256 |
Q |
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| T |
7336832 |
tacactaaccaagcttttgcattgatctattttcttcga |
7336794 |
T |
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