View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21505_high_11 (Length: 294)
Name: NF21505_high_11
Description: NF21505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21505_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 10 - 289
Target Start/End: Original strand, 45015977 - 45016256
Alignment:
| Q |
10 |
ataattcttcatttttaaatatcaatatatctttttgaacaaaagcagaggccaaaaggaaaaggttatttgtcggttaaattccaaatgcatccccatc |
109 |
Q |
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| T |
45015977 |
ataattcttcatttttaaatatcaatatatctttttgaacaaaagcagaggccaaaaggaaaaggttatttgtcggttaaattccaaatgcatccccatc |
45016076 |
T |
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| Q |
110 |
tagtaagcacctacatattcacagacatactaacctttatttattcaacaacttaatttattaatatataggtggacggtagaggattttttgcaccaat |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
45016077 |
tagtaagcacctacatattcacagacatactaacctttatttattcaacaacttaattaattaatatataggtggacggtagaggattttttgcaccaat |
45016176 |
T |
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| Q |
210 |
atgaatatggacccattttcagcttctaagaggtgcttaatgcttgtgttacatgcaggttaaagtgggattagtaataa |
289 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45016177 |
atgtatatggacccattttcagcttctaagaggtgcttaatgcttgtgttacatgcaggttaaagtgggattagtaataa |
45016256 |
T |
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