View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21505_low_14 (Length: 238)
Name: NF21505_low_14
Description: NF21505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21505_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 45016341 - 45016559
Alignment:
| Q |
1 |
aataaattatataactataattgaaattctagtacatggatacataagaagatgttt-ttaacgtacatgagtttctaagatcccatacatcataaacaa |
99 |
Q |
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| T |
45016341 |
aataaattatataactataattgaaattctactacatggatacataagaagatgttaattaacgtacatgagttcctacgatcccatacatcataaacaa |
45016440 |
T |
|
| Q |
100 |
tggggatttgatttactcttaatatttagtcctttctttcatcatatataaatgcctctacaataaaactcatatattaacttaattaatattgttttac |
199 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
45016441 |
tggggatttgatttactct-aatatttagtcctttctttcatcatatataaatgcctctacaataaaactcatatattaacttaattaatattgttttac |
45016539 |
T |
|
| Q |
200 |
atagaggatgcatgcatata |
219 |
Q |
| |
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|||||||||||||||||||| |
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| T |
45016540 |
atagaggatgcatgcatata |
45016559 |
T |
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