View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21506_low_5 (Length: 427)
Name: NF21506_low_5
Description: NF21506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21506_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 15 - 356
Target Start/End: Complemental strand, 41655161 - 41654822
Alignment:
| Q |
15 |
gagatgaattatacatttgttgtagaactttacgtctggtggatccaattagttcgcaagtcgtagacataaagctaaactaaaataaactgttttgcag |
114 |
Q |
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| T |
41655161 |
gagatgaattatacatttgttgtagaactttacgtctggtggatccaattagttcgcaagtcgtagacataaagctaaactaaaataaactgttttgcag |
41655062 |
T |
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| Q |
115 |
tgtaattccattcttggattatcatcatcattaccatacctttaaagacaagcatagctcgcaaagatccaaaaagctgttatgataatattttttaaat |
214 |
Q |
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| T |
41655061 |
tttaattccattcttggattatcatcatcattaccatacctttaaagacaagcatagctcgcaaaga--caaaaagctgttatgataatattttttaaat |
41654964 |
T |
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| Q |
215 |
actaacttcattattattcaatatttgatactacttggtcgattcagaaacttgttggtctctcgattggttcaataattttttattcataatctctcaa |
314 |
Q |
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| T |
41654963 |
actaacttcattattattcaatatttgatactacttggtcgattcagaaacctgttagtctctcgattggttcaataattttttattcataatctctcaa |
41654864 |
T |
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| Q |
315 |
aattggaataaactgatttgattcatgtttgttcaaccgatc |
356 |
Q |
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| T |
41654863 |
aattggaataaactgatttgattcatgtttgttcaaccgatc |
41654822 |
T |
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