View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21507_low_4 (Length: 430)
Name: NF21507_low_4
Description: NF21507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21507_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 21 - 423
Target Start/End: Original strand, 32261101 - 32261503
Alignment:
| Q |
21 |
atcaattgagttatccaaccccaaactatgtatatgttgtctttaattttacctttgaccctatttgtattttatagttttacacaacaaactaacaaat |
120 |
Q |
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| T |
32261101 |
atcaattgagttatccaaccccaaactatgtatatgttgtctttaattttacctttgatcctatttgtattttatagttttacacaacaaactaacaaat |
32261200 |
T |
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| Q |
121 |
taactttatgtttgtagctaatggatgatgaaacattgagtcacttgatgataggtgtggtggttacaactgcaatcatcatacccctcattaaattgtt |
220 |
Q |
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| T |
32261201 |
taactttatgtttgtagctaatggatgatgaaacattgagtcacttgatgataggtgtggtggttacaactgcaatcatcacacccctcattaaattgtt |
32261300 |
T |
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| Q |
221 |
atacaagcatcgtcctcgagtcttaagttcatcaagcatatttgatgaagaaatgagaacaatccaaaacactccaagaaattcagagtttcgcattgtt |
320 |
Q |
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| T |
32261301 |
atacaagcatcgtcctcgagtattaagttcatcaagcatatttgatgaagaaatgagaacaatccaaaacactccaagaaattcagagtttcgcattgtt |
32261400 |
T |
|
| Q |
321 |
acttgtttacatagtgaaggaaacgttcgtggcatgactgccctagtggaaatttgcaacccaattcaagaaagtcccttatgtgtctttgtgattcatc |
420 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32261401 |
acttgtttacatagtgaaggaaacgttcgtggcatgactgccctagtggaaatttgcaacccaattcaagaaagtcccttatgtgtctttgtgattcatc |
32261500 |
T |
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| Q |
421 |
tca |
423 |
Q |
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| T |
32261501 |
tca |
32261503 |
T |
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