View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21507_low_5 (Length: 385)

Name: NF21507_low_5
Description: NF21507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21507_low_5
NF21507_low_5
[»] chr5 (19 HSPs)
chr5 (185-269)||(32097979-32098063)
chr5 (116-184)||(18655702-18655770)
chr5 (120-190)||(13276813-13276883)
chr5 (116-189)||(9083346-9083419)
chr5 (116-184)||(9081979-9082047)
chr5 (116-184)||(12373771-12373839)
chr5 (116-184)||(18654296-18654364)
chr5 (116-184)||(39349480-39349548)
chr5 (116-189)||(12372309-12372382)
chr5 (116-189)||(35952486-35952559)
chr5 (116-184)||(8447077-8447145)
chr5 (116-184)||(39350695-39350763)
chr5 (116-183)||(25001643-25001710)
chr5 (116-182)||(19228840-19228906)
chr5 (137-189)||(4031876-4031928)
chr5 (116-184)||(19230123-19230191)
chr5 (120-187)||(6803678-6803745)
chr5 (116-181)||(13278281-13278346)
chr5 (120-181)||(6801977-6802038)
[»] chr3 (52 HSPs)
chr3 (116-184)||(23073424-23073492)
chr3 (116-184)||(54353023-54353091)
chr3 (118-184)||(34014508-34014574)
chr3 (120-184)||(10979229-10979293)
chr3 (116-184)||(31937035-31937103)
chr3 (116-186)||(31938357-31938427)
chr3 (116-189)||(23091186-23091259)
chr3 (116-181)||(46902334-46902399)
chr3 (112-189)||(46903670-46903747)
chr3 (116-192)||(50881159-50881235)
chr3 (116-183)||(35759281-35759348)
chr3 (116-182)||(43394104-43394170)
chr3 (127-184)||(24376489-24376546)
chr3 (116-189)||(28777737-28777810)
chr3 (116-184)||(2232602-2232670)
chr3 (116-184)||(11348521-11348589)
chr3 (116-184)||(21727910-21727978)
chr3 (116-183)||(37609322-37609389)
chr3 (116-186)||(2233355-2233425)
chr3 (116-189)||(43392621-43392694)
chr3 (116-161)||(50879517-50879562)
chr3 (120-184)||(17117453-17117517)
chr3 (116-188)||(52525409-52525481)
chr3 (120-184)||(53101827-53101891)
chr3 (116-184)||(54354441-54354509)
chr3 (116-183)||(27749107-27749174)
chr3 (116-183)||(47429628-47429695)
chr3 (116-187)||(53178698-53178769)
chr3 (116-190)||(17742343-17742417)
chr3 (116-190)||(19043663-19043737)
chr3 (120-181)||(5691148-5691209)
chr3 (120-181)||(15290543-15290604)
chr3 (127-184)||(17116202-17116259)
chr3 (116-181)||(52521930-52521995)
chr3 (116-181)||(53764432-53764496)
chr3 (116-181)||(55209785-55209850)
chr3 (116-188)||(23072056-23072128)
chr3 (112-184)||(27750477-27750549)
chr3 (120-184)||(28776448-28776512)
chr3 (137-181)||(37610797-37610841)
chr3 (116-183)||(11346813-11346880)
chr3 (116-183)||(53180854-53180920)
chr3 (136-183)||(53766036-53766083)
chr3 (118-184)||(46986142-46986208)
chr3 (127-184)||(34015829-34015886)
chr3 (136-184)||(35758064-35758112)
chr3 (136-182)||(53101545-53101590)
chr3 (132-166)||(53178779-53178813)
chr3 (127-184)||(5689725-5689782)
chr3 (112-161)||(47431233-47431282)
chr3 (132-161)||(53765972-53766001)
chr3 (121-161)||(47917667-47917707)
[»] chr2 (14 HSPs)
chr2 (116-184)||(23833920-23833988)
chr2 (110-184)||(27892380-27892454)
chr2 (116-185)||(16602724-16602793)
chr2 (120-184)||(16604243-16604307)
chr2 (116-184)||(27891106-27891174)
chr2 (112-184)||(38244001-38244073)
chr2 (116-183)||(19577376-19577443)
chr2 (116-186)||(5033476-5033546)
chr2 (116-182)||(26388220-26388286)
chr2 (116-186)||(43814519-43814589)
chr2 (116-185)||(23832967-23833036)
chr2 (136-184)||(5034886-5034934)
chr2 (121-163)||(43814602-43814644)
chr2 (132-161)||(27892342-27892371)
[»] chr7 (48 HSPs)
chr7 (115-186)||(44231891-44231962)
chr7 (112-190)||(48792437-48792515)
chr7 (116-185)||(13750686-13750755)
chr7 (116-189)||(19217622-19217695)
chr7 (116-184)||(29188080-29188148)
chr7 (120-187)||(9391516-9391583)
chr7 (116-186)||(27072704-27072774)
chr7 (116-186)||(27205539-27205609)
chr7 (119-197)||(44417444-44417522)
chr7 (116-189)||(3538613-3538686)
chr7 (116-184)||(32519799-32519867)
chr7 (116-184)||(42611435-42611503)
chr7 (112-184)||(48793562-48793634)
chr7 (116-181)||(3537429-3537494)
chr7 (112-189)||(18787143-18787220)
chr7 (127-184)||(27071020-27071077)
chr7 (127-184)||(27207236-27207293)
chr7 (116-185)||(45688866-45688935)
chr7 (116-184)||(7011633-7011701)
chr7 (116-184)||(7026991-7027059)
chr7 (127-183)||(7057390-7057446)
chr7 (116-184)||(29186664-29186732)
chr7 (116-184)||(43962619-43962687)
chr7 (116-184)||(44420572-44420640)
chr7 (127-194)||(19008921-19008988)
chr7 (116-184)||(13597144-13597212)
chr7 (116-184)||(18788610-18788678)
chr7 (116-184)||(43113674-43113742)
chr7 (136-183)||(26005412-26005459)
chr7 (116-179)||(32518426-32518489)
chr7 (118-184)||(26006795-26006861)
chr7 (136-190)||(43960939-43960993)
chr7 (116-189)||(12630498-12630571)
chr7 (136-189)||(13599268-13599321)
chr7 (116-184)||(9392865-9392933)
chr7 (118-185)||(37237277-37237344)
chr7 (127-184)||(19016758-19016815)
chr7 (124-184)||(37235813-37235873)
chr7 (120-188)||(44746722-44746790)
chr7 (132-186)||(43115093-43115146)
chr7 (139-197)||(44748576-44748634)
chr7 (132-161)||(43962575-43962604)
chr7 (115-188)||(45398538-45398611)
chr7 (132-161)||(48793522-48793551)
chr7 (128-188)||(24653733-24653793)
chr7 (116-184)||(44230427-44230495)
chr7 (115-187)||(45400059-45400131)
chr7 (133-161)||(48792526-48792554)
[»] chr6 (15 HSPs)
chr6 (115-186)||(29477757-29477828)
chr6 (116-184)||(18572885-18572953)
chr6 (116-185)||(3000843-3000912)
chr6 (116-185)||(34995351-34995420)
chr6 (116-188)||(18574343-18574415)
chr6 (116-184)||(11801392-11801460)
chr6 (116-184)||(32713933-32714001)
chr6 (116-184)||(32347808-32347876)
chr6 (116-184)||(32349087-32349155)
chr6 (121-190)||(32712349-32712418)
chr6 (116-184)||(29479244-29479312)
chr6 (116-182)||(34996811-34996877)
chr6 (138-181)||(19383219-19383262)
chr6 (116-183)||(19788248-19788315)
chr6 (136-164)||(34995431-34995459)
[»] scaffold0141 (2 HSPs)
scaffold0141 (116-190)||(35335-35409)
scaffold0141 (116-184)||(31033-31101)
[»] scaffold0049 (2 HSPs)
scaffold0049 (116-190)||(79403-79477)
scaffold0049 (116-184)||(83711-83779)
[»] scaffold1425 (2 HSPs)
scaffold1425 (116-184)||(134-202)
scaffold1425 (116-184)||(1651-1719)
[»] chr8 (27 HSPs)
chr8 (116-184)||(3714570-3714638)
chr8 (116-186)||(26364739-26364809)
chr8 (116-184)||(43584408-43584476)
chr8 (116-190)||(9244059-9244133)
chr8 (116-184)||(9245481-9245550)
chr8 (116-181)||(30644754-30644819)
chr8 (116-185)||(41638202-41638271)
chr8 (116-184)||(41636831-41636899)
chr8 (127-181)||(30640801-30640855)
chr8 (120-186)||(31202964-31203030)
chr8 (116-184)||(20308923-20308991)
chr8 (116-184)||(21095556-21095624)
chr8 (116-188)||(34644010-34644081)
chr8 (116-184)||(43134099-43134167)
chr8 (116-183)||(522147-522214)
chr8 (119-185)||(26366247-26366313)
chr8 (116-182)||(34642667-34642733)
chr8 (120-181)||(43585998-43586059)
chr8 (115-184)||(22013288-22013357)
chr8 (132-163)||(26364822-26364853)
chr8 (120-186)||(20310106-20310172)
chr8 (120-186)||(21096739-21096805)
chr8 (115-184)||(22012157-22012226)
chr8 (132-161)||(30640880-30640909)
chr8 (132-161)||(30644710-30644739)
chr8 (132-161)||(43584491-43584520)
chr8 (141-189)||(38665941-38665989)
[»] chr4 (29 HSPs)
chr4 (116-184)||(7261593-7261661)
chr4 (116-184)||(34122852-34122920)
chr4 (116-185)||(10802888-10802957)
chr4 (116-184)||(17356361-17356429)
chr4 (116-181)||(17357913-17357978)
chr4 (116-189)||(38031163-38031236)
chr4 (112-181)||(48499367-48499436)
chr4 (116-184)||(8815407-8815475)
chr4 (116-184)||(10804245-10804313)
chr4 (116-184)||(22621867-22621935)
chr4 (116-184)||(34121299-34121367)
chr4 (116-183)||(23758021-23758088)
chr4 (116-186)||(38032470-38032540)
chr4 (116-189)||(8814130-8814203)
chr4 (116-184)||(48463034-48463102)
chr4 (116-180)||(48501373-48501437)
chr4 (116-184)||(56235070-56235138)
chr4 (112-181)||(48081636-48081705)
chr4 (116-184)||(18091580-18091648)
chr4 (116-184)||(35191817-35191885)
chr4 (116-182)||(35193246-35193312)
chr4 (116-161)||(48081580-48081625)
chr4 (116-185)||(56233723-56233792)
chr4 (116-164)||(5433457-5433505)
chr4 (116-184)||(48080270-48080338)
chr4 (145-184)||(22624389-22624428)
chr4 (131-182)||(48081392-48081443)
chr4 (116-153)||(22623193-22623230)
chr4 (116-161)||(34095709-34095754)
[»] chr1 (28 HSPs)
chr1 (116-184)||(18819262-18819330)
chr1 (116-190)||(51693141-51693215)
chr1 (115-184)||(18820805-18820874)
chr1 (116-189)||(25181496-25181569)
chr1 (116-189)||(51468334-51468407)
chr1 (116-189)||(52086622-52086695)
chr1 (116-184)||(40187603-40187671)
chr1 (112-184)||(51468947-51469019)
chr1 (116-186)||(17244173-17244243)
chr1 (116-187)||(5488917-5488988)
chr1 (118-184)||(17245716-17245782)
chr1 (119-176)||(45228283-45228340)
chr1 (120-184)||(1823346-1823410)
chr1 (116-184)||(7110226-7110294)
chr1 (116-180)||(47532961-47533025)
chr1 (136-184)||(52761606-52761654)
chr1 (116-178)||(50485046-50485108)
chr1 (120-181)||(45229657-45229718)
chr1 (120-184)||(50483511-50483574)
chr1 (116-184)||(52759363-52759431)
chr1 (116-183)||(5488502-5488569)
chr1 (116-187)||(7111525-7111595)
chr1 (127-192)||(40723097-40723162)
chr1 (132-163)||(5488582-5488613)
chr1 (136-166)||(45228353-45228383)
chr1 (112-182)||(47533900-47533970)
chr1 (132-161)||(45229609-45229638)
chr1 (116-161)||(52087824-52087869)
[»] scaffold0878 (1 HSPs)
scaffold0878 (110-184)||(3071-3145)
[»] scaffold0018 (1 HSPs)
scaffold0018 (116-185)||(25395-25464)
[»] scaffold0026 (1 HSPs)
scaffold0026 (127-184)||(104301-104358)


Alignment Details
Target: chr5 (Bit Score: 81; Significance: 5e-38; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 32097979 - 32098063
Alignment:
Q  185 aaaaatctaatataacaggtgcagcagctggtgcaaagttgggtgaaaatagaaaatggatccgctcaatctctttcttgtcatg 269  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32097979 aaaaatctaatataacaggtgcaacagctggtgcaaagttgggtgaaaatagaaaatggatccgctcaatctctttcttgtcatg 32098063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 18655702 - 18655770
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18655702 aaagttaagacttatgtgaccaaattgaataaaagaaataagttaaggaaccggcagatcaattaagcc 18655770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 13276883 - 13276813
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaat 190  Q
    ||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  13276883 ttaagatttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaaat 13276813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 9083346 - 9083419
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| |||||||| ||||||||||||||||||| | ||||  ||||||||||||||||||||||||||    
T  9083346 aaagttaagacttatgggaccaaattgaataaaagaaatgaattaagaaaccggcagatcaattaagccaaaaa 9083419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 9082047 - 9081979
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  9082047 aaagttaagacttatggaatcaaattgaataaaagaaatgagttaaggaaccggtagatcaattaagcc 9081979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 12373771 - 12373839
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  12373771 aaagttaagacttatgggactaaattgaataaaagaaataagttaaaggaccggcggatcaattaagcc 12373839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 18654364 - 18654296
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  18654364 aaagttaagacttatgggaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 18654296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 39349548 - 39349480
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||| | |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  39349548 aaagttaagagttatggaaccaaattgaataaaagaaataagttaaaggaccgtcagatcaattaagcc 39349480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 12372382 - 12372309
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| ||||| || |||||||||||||| ||||||||||| | |||||||||||||||||||| ||||    
T  12372382 aaagttaagacttatgagaccaaattgaataaaacaaataagttaagggaccggcagatcaattaagcctaaaa 12372309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 35952486 - 35952559
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||||||||| || |||||||||||||||||||||||||||| || | ||||||| ||||||| ||||    
T  35952486 aaagttaagatttatgagaccaaattgaataaaagaaataagttaaaggactgacagatcagttaagcctaaaa 35952559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 8447145 - 8447077
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  8447145 aaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggtagatcaattaagcc 8447077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 39350695 - 39350763
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  39350695 aaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcatatcaattaagcc 39350763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 25001710 - 25001643
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||| |||| || |||||||||||    
T  25001710 aaagttaagacttatgaaatcaaattgaataaaagaaataagttaaaggaccgacatatcaattaagc 25001643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 19228906 - 19228840
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaag 182  Q
    |||||||||| |||| ||| ||||||||||||||||||||| |||| | ||||||||||||||||||    
T  19228906 aaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaattaag 19228840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 4031928 - 4031876
Alignment:
Q  137 aaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  4031928 aaattgaataaaagaaataagttaagtgaccggcagatcaattaagccaaaaa 4031876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 19230123 - 19230191
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||| ||| ||||||||||||||||||||| |||| | | ||||||||||||||||||    
T  19230123 aaagttaagacttataggaccaaattgaataaaagaaataaattaagggatcggcagatcaattaagcc 19230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 6803678 - 6803745
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaa 187  Q
    |||||| ||||| || |||||| |||||||||||||| |||| | |||| ||||||||||||||||||    
T  6803678 ttaagacttatgtgaccaaattaaataaaagaaataaattaagggaccgacagatcaattaagccaaa 6803745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 13278281 - 13278346
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||||||| ||||| || |||||||||||||| |||||| |||| | |||| ||||||||||||    
T  13278281 aaagttaagacttatgagaccaaattgaataaaaaaaataaattaagggaccgacagatcaattaa 13278346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 6802038 - 6801977
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||| ||||| || |||||| || |||||||||||||||| | ||| |||||||||||||    
T  6802038 ttaagacttatgagaccaaattaaaaaaaagaaataagttaagggaccagcagatcaattaa 6801977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 23073424 - 23073492
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23073424 aaagttaagatttatgggaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 23073492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 54353091 - 54353023
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  54353091 aaagttaagacttatgggatcaaattgaataaaagaaataagttaaaggaccgtcagatcaattaagcc 54353023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 34014574 - 34014508
Alignment:
Q  118 agttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  34014574 agttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 34014508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 10979229 - 10979293
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  10979229 ttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 10979293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 31937103 - 31937035
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  31937103 aaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 31937035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 31938357 - 31938427
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  31938357 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagccaa 31938427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 23091259 - 23091186
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  23091259 aaagttaagacttatgtgaccaaattgaataaaagaaataagttaaaagaccggcagatcaattaagcctaaaa 23091186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 46902399 - 46902334
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | |||| ||||||||||||    
T  46902399 aaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaa 46902334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 46903670 - 46903747
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| | || |  |||||||||||||||||||    
T  46903670 tgaaaaacttaagatttatgggaccaaattgaataaaagaaataagttaagggactgaaagatcaattaagccaaaaa 46903747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 50881159 - 50881235
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaatct 192  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||| | |||| || ||||||||||||||||||||    
T  50881159 aaagttaagacttatgtggtcaaattgaataaaagaaataagttaagggaccgacacatcaattaagccaaaaatct 50881235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 35759281 - 35759348
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||    
T  35759281 aaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 35759348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 43394104 - 43394170
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaag 182  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | ||||||||||||||||||    
T  43394104 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 43394170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 24376489 - 24376546
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24376489 ttatgagaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 24376546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 28777737 - 28777810
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| |||| ||| ||||||||||||||||||||| |||| | |||||||||||||||||||| ||||    
T  28777737 aaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcctaaaa 28777810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 2232670 - 2232602
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | | ||||||||||||||||||    
T  2232670 aaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggatcggcagatcaattaagcc 2232602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 11348521 - 11348589
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | ||||| || |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  11348521 aaagttaatacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 11348589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 21727978 - 21727910
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| || |||||||||||||||||||||||||  | ||||||||||||||||||||    
T  21727978 aaagttaagacttatgagaccaaattgaataaaagaaataagttatgggaccggcagatcaattaagcc 21727910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 37609389 - 37609322
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||| ||||  || |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  37609389 aaagttaagacttatatgaccaaattaaataaaagaaataagttaaaggaccggcagatcaattaagc 37609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 2233355 - 2233425
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||||||| ||||| || | |||||||||||||||||||||||| | |||| |||||||||||||||||    
T  2233355 aaagttaagacttatgagaccgaattgaataaaagaaataagttaagggaccgacagatcaattaagccaa 2233425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 43392694 - 43392621
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | |||| ||||||||||| || |||||    
T  43392694 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccgacagatcaattacgcaaaaaa 43392621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 50879562 - 50879517
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  50879562 aaagttaagatttatgggaccaaattgaataaaagaaataagttaa 50879517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 17117453 - 17117517
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||| ||||| || |||||||||||||||||||||||||| | |||| |||||||||||||||    
T  17117453 ttaagacttatgagaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 17117517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 52525409 - 52525481
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaa 188  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | |||| || |||||||||| |||||    
T  52525409 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccgacaaatcaattaagtcaaaa 52525481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 53101827 - 53101891
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||| |||| ||| ||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  53101827 ttaagaattataggaccaaattgaataaaagaaataacttaagggaccggcagatcaattaagcc 53101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 54354441 - 54354509
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||| |||| |||||| ||||||||||||| ||||| | ||||||||||||||||||||    
T  54354441 aaagttaagacttaagggaccaaattaaataaaagaaataggttaagggaccggcagatcaattaagcc 54354509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 27749174 - 27749107
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||| ||||| ||  ||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  27749174 aaagttaagacttatgtgactaaattgaataaaagacataagttaaggaaccggtagatcaattaagc 27749107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 47429695 - 47429628
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | ||  |||||||||||||||    
T  47429695 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggacatgcagatcaattaagc 47429628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 53178769 - 53178698
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaa 187  Q
    |||||||||  |||||  |||||||||||||||| ||||||||||| | | |||||||||||||||||||||    
T  53178769 aaagttaaggcttatgaaatcaaattgaataaaaaaaataagttaagggatcggcagatcaattaagccaaa 53178698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 17742343 - 17742417
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaat 190  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | | ||||||||  |||||||| |||||    
T  17742343 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggatcggcagatgtattaagcctaaaat 17742417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 19043663 - 19043737
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaat 190  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | | ||||||||  |||||||| |||||    
T  19043663 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggatcggcagatgtattaagcctaaaat 19043737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 5691148 - 5691209
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||| ||||| ||  ||||||||||||||||||||||||| | |||||||||||||||||    
T  5691148 ttaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaa 5691209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 15290543 - 15290604
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||| ||||| ||||||||| ||||||||||||||||||| | |||| ||||||||||||    
T  15290543 ttaagacttatgtgatcaaattaaataaaagaaataagttaagggaccgacagatcaattaa 15290604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 17116259 - 17116202
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||| || |||||||||||||||||||||||||| | | ||||||||||||||||||    
T  17116259 ttatgagaccaaattgaataaaagaaataagttaagggatcggcagatcaattaagcc 17116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 52521995 - 52521930
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    ||||||||||| |||| || |||||||||| ||||||||||||||| | ||| |||||||||||||    
T  52521995 aaagttaagatctatgagaccaaattgaattaaagaaataagttaagggaccagcagatcaattaa 52521930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 53764496 - 53764432
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||||||| ||||| || |||||||||||||| ||||||||||||| ||||| |||||||||||    
T  53764496 aaagttaagacttatgagaccaaattgaataaaa-aaataagttaaaggaccggtagatcaattaa 53764432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 55209850 - 55209785
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||||| | |||||| | |||||||||||||||||||||||||| | ||||| |||||||||||    
T  55209850 aaagttaaaacttatggaaccaaattgaataaaagaaataagttaagggaccggtagatcaattaa 55209785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 23072128 - 23072056
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaa 188  Q
    |||||||||| |||||||| ||||||||||||| ||||| | |||| | ||| ||||||||||||| ||||||    
T  23072128 aaagttaagacttatgggaccaaattgaataaatgaaatgaattaagggaccagcagatcaattaaaccaaaa 23072056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 27750477 - 27750549
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||| |||| | ||||| || ||||||||||||||||||||| |||||| || |||||||||||| ||||    
T  27750477 tgaaaaaattaaaacttatgagaccaaattgaataaaagaaataaattaaaggactggcagatcaattgagcc 27750549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 28776512 - 28776448
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||| |||||||||||||||||| |||||| |||||| || |  ||||||||||||||    
T  28776512 ttaagatttataggatcaaattgaataaaaaaaataaattaaaggactgatagatcaattaagcc 28776448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 37610797 - 37610841
Alignment:
Q  137 aaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  37610797 aaattgaataaaagaaataagttaagggaccggcagatcaattaa 37610841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 11346880 - 11346813
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||||||||  || |||||| |||||||||||||| |||| | |||| ||||||||||||||    
T  11346880 aaagttaagatttatatgaccaaattaaataaaagaaataaattaagggaccgacagatcaattaagc 11346813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 53180854 - 53180920
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    ||||||| || ||||| ||||||||||||||||| ||||||||||| | ||||||| |||||||||||    
T  53180854 aaagttacgacttatgagatcaaattgaataaaa-aaataagttaagggaccggcaaatcaattaagc 53180920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 53766036 - 53766083
Alignment:
Q  136 caaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||||||||||||||||||| | ||| |||||||||||||||    
T  53766036 caaattgaataaaagaaataagttaagggacccgcagatcaattaagc 53766083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 46986142 - 46986208
Alignment:
Q  118 agttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| |||| ||| ||||||||||||||||||||| |||| |  |||||| ||||||||||||    
T  46986142 agttaagacttattggaccaaattgaataaaagaaataaattaaggggccggcaaatcaattaagcc 46986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 34015829 - 34015886
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| ||||||||||||||||||||| |||| | |||| || ||||||||||||    
T  34015829 ttatgggaccaaattgaataaaagaaataacttaagggaccgacaaatcaattaagcc 34015886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 35758112 - 35758064
Alignment:
Q  136 caaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||||||||||||||||||| | ||||||||||  ||||||||    
T  35758112 caaattgaataaaagaaataagttaagggaccggcagattgattaagcc 35758064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 53101590 - 53101545
Alignment:
Q  136 caaattgaataaaagaaataagttaaagaaccggcagatcaattaag 182  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  53101590 caaattgaataaaagaa-taaattaaaggaccggcagatcaattaag 53101545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 53178813 - 53178779
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaaagaac 166  Q
    |||||||||||||||||||||||||||||| ||||    
T  53178813 ggatcaaattgaataaaagaaataagttaaggaac 53178779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 5689782 - 5689725
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| |||||| ||||||||||||||| ||| | | || |||||||||||||||    
T  5689782 ttatgggaccaaatttaataaaagaaataagctaagggagcgacagatcaattaagcc 5689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 47431233 - 47431282
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaa 161  Q
    |||||||||||| | ||||| || ||||||||||||||||||||| ||||    
T  47431233 tgaaaaagttaaaacttatgagaccaaattgaataaaagaaataaattaa 47431282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 53765972 - 53766001
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  53765972 ggatcaaattgaataaaagaaataagttaa 53766001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 47917667 - 47917707
Alignment:
Q  121 taagatttatgggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||| || |||||| |||||||||||||||||||    
T  47917667 taagatttatgagaccaaattaaataaaagaaataagttaa 47917707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 23833920 - 23833988
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  23833920 aaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 23833988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 27892380 - 27892454
Alignment:
Q  110 tctgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||| |||||||||| ||||| || |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  27892380 tctgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 27892454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 16602793 - 16602724
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||| | |||| ||||||||||||||||    
T  16602793 aaagttaagacttatgggaccaaattgaataaaagaaataaattaagggaccgacagatcaattaagcca 16602724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 16604243 - 16604307
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||| |||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  16604243 ttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggtagatcaattaagcc 16604307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 27891174 - 27891106
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||  |||| || |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  27891174 aaagttaagacctatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 27891106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 38244001 - 38244073
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||||||| |||||||| |||| |||||||||||||||| |||| | |||| |||||||||||||||    
T  38244001 tgaaaaagttaagacttatgggaccaaaatgaataaaagaaataaattaagggaccgacagatcaattaagcc 38244073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 19577376 - 19577443
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||| | ||||| |||||||||||||    
T  19577376 aaagttaagagttatgggaccaaattgactaaaagaaataagttaagggaccgggagatcaattaagc 19577443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 5033546 - 5033476
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||||| | |||| ||| |||||||||||||||||||||||||||| || | |||||| ||||||||||    
T  5033546 aaagttaaaagttataggaccaaattgaataaaagaaataagttaaaggactgacagatctattaagccaa 5033476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 26388286 - 26388220
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaag 182  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||   |||| |||||||||||||    
T  26388286 aaagttaagacttatgagatcaaattgaataaaaaaaataagttaagagaccgacagatcaattaag 26388220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 43814589 - 43814519
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||||||| ||||| ||  ||||||||||||||||||||||||| | |||| || ||||||||||||||    
T  43814589 aaagttaagacttatgagacgaaattgaataaaagaaataagttaagggaccgacaaatcaattaagccaa 43814519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 23833036 - 23832967
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    |||||||||| |||||||| ||||| |||||||| ||||||||||| | |||| || |||||||||||||    
T  23833036 aaagttaagacttatgggaccaaatggaataaaataaataagttaagggaccgacaaatcaattaagcca 23832967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 5034886 - 5034934
Alignment:
Q  136 caaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  5034886 caaattaaataaaagaaataagttaaaggaccggcaaatcaattaagcc 5034934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 43814644 - 43814602
Alignment:
Q  121 taagatttatgggatcaaattgaataaaagaaataagttaaag 163  Q
    ||||| ||||| |||||||||||||||||||||||||||||||    
T  43814644 taagacttatgtgatcaaattgaataaaagaaataagttaaag 43814602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 27892342 - 27892371
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  27892342 ggatcaaattgaataaaagaaataagttaa 27892371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 44231891 - 44231962
Alignment:
Q  115 aaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||||||    
T  44231891 aaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagccaa 44231962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 48792515 - 48792437
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaat 190  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  48792515 tgaaaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaaat 48792437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 13750686 - 13750755
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  13750686 aaagttaagacttatgtgatcaaattgaataaaagaaataagttaagggaccggcagatcaattaagcca 13750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 19217695 - 19217622
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||| ||||    
T  19217695 aaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaaa 19217622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 29188080 - 29188148
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||    
T  29188080 aaagttaagacttatgggaccaaattgaataaaagaaataagttaaaggaccggcagatcatttaagcc 29188148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 9391583 - 9391516
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaa 187  Q
    ||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  9391583 ttaagatttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagccaaa 9391516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 27072704 - 27072774
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  27072704 aaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagccaa 27072774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 27205609 - 27205539
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  27205609 aaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagccaa 27205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 44417522 - 44417444
Alignment:
Q  119 gttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaatctaatat 197  Q
    ||||||| |||||| | |||||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||||||    
T  44417522 gttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaaatataatat 44417444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 3538613 - 3538686
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  3538613 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcggatcaattaagccaaaaa 3538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 32519799 - 32519867
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| | ||||||||||||||| ||||    
T  32519799 aaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccggcagatcaatttagcc 32519867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 42611503 - 42611435
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | |||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42611503 aaagttaaaacttatggaaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 42611435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 48793562 - 48793634
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||| | ||||||| ||||||||||||    
T  48793562 tgaaaaagttaagacttatgggaccaaaatgaataaaagaaataagttaagggaccggcaaatcaattaagcc 48793634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 3537494 - 3537429
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | |||||||||||||||||    
T  3537494 aaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaa 3537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 18787220 - 18787143
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    ||||||||||||||||||||||| |||||| || ||||||||||| |||| | |||| |||||||||||||| |||||    
T  18787220 tgaaaaagttaagatttatgggaccaaattaaacaaaagaaataaattaagggaccgacagatcaattaagctaaaaa 18787143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 27071077 - 27071020
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  27071077 ttatgggaccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagcc 27071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 27207236 - 27207293
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  27207236 ttatgggaccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagcc 27207293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 45688935 - 45688866
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  45688935 aaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcca 45688866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 7011701 - 7011633
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| | || | |||||||||||||||    
T  7011701 aaagttaagacttatgagatcaaattgaataaaagaaataagttaagggactgacagatcaattaagcc 7011633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 7027059 - 7026991
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| | || | |||||||||||||||    
T  7027059 aaagttaagacttatgagatcaaattgaataaaagaaataagttaagggactgacagatcaattaagcc 7026991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 7057390 - 7057446
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||    
T  7057390 ttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 7057446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 29186732 - 29186664
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  29186732 aaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcc 29186664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 43962619 - 43962687
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||| ||||| ||||| || |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  43962619 aaagctaagacttatgtgaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 43962687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 44420572 - 44420640
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  44420572 aaagttaagacttatgagaccaaattgaataaaagaaataagttaaaggatcggcatatcaattaagcc 44420640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 19008988 - 19008921
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaatctaa 194  Q
    |||||||| ||||||||| |||||||||||||||| | |||| ||||||||||||||| |||||||||    
T  19008988 ttatgggaccaaattgaaaaaaagaaataagttaagggaccgacagatcaattaagcctaaaatctaa 19008921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 13597212 - 13597144
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||| ||| |||||||||||||||||||| ||||||| | |||||| |||||||||||    
T  13597212 aaagttaagacttataggaccaaattgaataaaagaaatacgttaaaggatcggcagttcaattaagcc 13597144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 18788610 - 18788678
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||||| ||| || |||||||||||||||||| |||| | ||||||| ||||||||||||    
T  18788610 aaagttaagatttataggaccatattgaataaaagaaataaattaagggaccggcatatcaattaagcc 18788678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 43113742 - 43113674
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | ||||| || |||||||||||||||||||||||||| | |||| |||||||||||||||    
T  43113742 aaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 43113674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 26005459 - 26005412
Alignment:
Q  136 caaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||    
T  26005459 caaattgaataaaagaaataagttaagggaccggcagatcaattaagc 26005412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 32518489 - 32518426
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaatt 179  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| | ||||  |||||||||    
T  32518489 aaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccgatagatcaatt 32518426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 26006795 - 26006861
Alignment:
Q  118 agttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||| | |||||||| ||||||||| |||||||||||||||| | |||| |||||||||||||||    
T  26006795 agttaaaacttatgggaccaaattgaacaaaagaaataagttaagggaccgacagatcaattaagcc 26006861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 43960993 - 43960939
Alignment:
Q  136 caaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaat 190  Q
    |||||||||||||||||||||||||| | |||| ||||||||||||||| |||||    
T  43960993 caaattgaataaaagaaataagttaagggaccgacagatcaattaagcctaaaat 43960939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 12630571 - 12630498
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| ||||| || |||||||||||||||| ||||||||||| |||| || ||||||||  |||||||    
T  12630571 aaagttaagacttatgagaccaaattgaataaaagacataagttaaaggaccgacatatcaattataccaaaaa 12630498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 13599268 - 13599321
Alignment:
Q  136 caaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||||||||||||||||||||| |  ||||||||||||| ||||||||    
T  13599268 caaattgaataaaagaaataagttaaaggattggcagatcaattatgccaaaaa 13599321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 9392865 - 9392933
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||| |||  ||||| ||||||||||||||||||||| | ||| ||||||||||||||    
T  9392865 aaagttaagacttataggaataaattaaataaaagaaataagttaaaggaacggaagatcaattaagcc 9392933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 37237277 - 37237344
Alignment:
Q  118 agttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    |||||||| ||||| || |||||| |||||||||||||| |||| | || ||||||||||||||||||    
T  37237277 agttaagacttatgagaccaaattaaataaaagaaataaattaagggacgggcagatcaattaagcca 37237344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 19016758 - 19016815
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| ||||||||| ||||||||||| |||| | |||| |||||||||||||||    
T  19016758 ttatgggaccaaattgaaaaaaagaaataaattaagggaccgacagatcaattaagcc 19016815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 37235873 - 37235813
Alignment:
Q  124 gatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||| | |||||| ||||||||||||||||||| | ||||||||  ||||||||||    
T  37235873 gatttatggaaccaaattaaataaaagaaataagttaagggaccggcaggccaattaagcc 37235813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 44746790 - 44746722
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaa 188  Q
    |||||| ||||  ||||||||||||||||| |||||||||||   |||| |||||||||||| ||||||    
T  44746790 ttaagacttataagatcaaattgaataaaaaaaataagttaagagaccgacagatcaattaaaccaaaa 44746722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 43115093 - 43115146
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||||||||||||||||||||||||| ||| |||  || ||||||||||||||    
T  43115093 ggatcaaattgaataaaagaaataagtt-aaggaccatcacatcaattaagccaa 43115146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 44748576 - 44748634
Alignment:
Q  139 attgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaatctaatat 197  Q
    |||||||||||||||||| |||| | || |||||||| |||||||||||| ||| ||||    
T  44748576 attgaataaaagaaataaattaagggactggcagatcgattaagccaaaagtcttatat 44748634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 43962575 - 43962604
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  43962575 ggatcaaattgaataaaagaaataagttaa 43962604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 45398611 - 45398538
Alignment:
Q  115 aaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaa 188  Q
    |||||||||||  ||||||| ||||| |||  |||||| |||||||| | |||| |||||||||||| ||||||    
T  45398611 aaaagttaagagctatgggaccaaatcgaaataaagaagtaagttaagggaccgacagatcaattaaaccaaaa 45398538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 48793522 - 48793551
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  48793522 ggatcaaattgaataaaagaaataagttaa 48793551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 24653733 - 24653793
Alignment:
Q  128 tatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaa 188  Q
    ||||||| ||| || |||||||||| |||||||| | |||||  |||||||||||||||||    
T  24653733 tatgggaccaatttaaataaaagaattaagttaagggaccggaggatcaattaagccaaaa 24653793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 44230495 - 44230427
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | |||||| |  ||||||||||||||||||||  ||| | | ||||||||||||||||||    
T  44230495 aaagttaaaacttatggaactaaattgaataaaagaaataatctaagggatcggcagatcaattaagcc 44230427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 45400059 - 45400131
Alignment:
Q  115 aaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaa 187  Q
    ||||||||||| ||||| || |||||  ||  ||| ||||||||||| | ||||||||||||||||| |||||    
T  45400059 aaaagttaagagttatgagaccaaatcaaaataaacaaataagttaagggaccggcagatcaattaaaccaaa 45400131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 161
Target Start/End: Complemental strand, 48792554 - 48792526
Alignment:
Q  133 gatcaaattgaataaaagaaataagttaa 161  Q
    |||||||||||||||||||||||||||||    
T  48792554 gatcaaattgaataaaagaaataagttaa 48792526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 29477828 - 29477757
Alignment:
Q  115 aaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  29477828 aaaagttaagatttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagccaa 29477757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 18572953 - 18572885
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  18572953 aaagttaagacttatgggaccaaattgaataaaagaaataagttaacggaccggcagatcaattaagcc 18572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 3000843 - 3000912
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | |||| || |||||||||||||    
T  3000843 aaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacaaatcaattaagcca 3000912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 34995420 - 34995351
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  34995420 aaagttaagacttatgagaccaaattgaataaaagaaataagttaaaggaccgacagatcaattaagcca 34995351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 18574343 - 18574415
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaa 188  Q
    |||||||||| |||||| | ||||||||||||||||||||||| || | ||||||||||||||||||||||||    
T  18574343 aaagttaagacttatggaaccaaattgaataaaagaaataagtcaagggaccggcagatcaattaagccaaaa 18574415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 11801392 - 11801460
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||| ||| ||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  11801392 aaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 11801460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 32713933 - 32714001
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||||||| | |||| |||||||||||||||||||| || ||| ||||||||||||||||    
T  32713933 aaagttaagatttatggaaccaaactgaataaaagaaataagttacaggaccagcagatcaattaagcc 32714001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 32347876 - 32347808
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||  || ||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  32347876 aaagttaagacttatatgaccaaattgaataaaagaaataaattaaggaaccagcagatcaattaagcc 32347808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 32349087 - 32349155
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||  || ||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  32349087 aaagttaagacttataagaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 32349155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 32712418 - 32712349
Alignment:
Q  121 taagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaat 190  Q
    |||||||||| ||| |||| ||||||||||||||||||||| | |||| |||||||||||| || |||||    
T  32712418 taagatttataggaccaaactgaataaaagaaataagttaagggaccgacagatcaattaaacctaaaat 32712349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 29479244 - 29479312
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | |||||||| || |||||||||||||||||| |||| | | ||||||||||||||||||    
T  29479244 aaagttaaaacttatgggaccagattgaataaaagaaataatttaagggatcggcagatcaattaagcc 29479312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 34996811 - 34996877
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaag 182  Q
    |||||||||| ||||||||  ||||||||||||||||||||||| | | |||| || ||||||||||    
T  34996811 aaagttaagacttatgggactaaattgaataaaagaaataagttcagggaccgacaaatcaattaag 34996877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 19383219 - 19383262
Alignment:
Q  138 aattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||||||||||||||||||||| | |||||| ||||||||||    
T  19383219 aattgaataaaagaaataagttaagggaccggcggatcaattaa 19383262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 19788315 - 19788248
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||| | ||||| ||||||||||||||||||||| ||||||| | | || ||||| ||||||||    
T  19788315 aaagttaaaacttatgagatcaaattgaataaaagaaacaagttaagggatcgacagatgaattaagc 19788248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 34995459 - 34995431
Alignment:
Q  136 caaattgaataaaagaaataagttaaaga 164  Q
    |||||||||||||||||||||||||||||    
T  34995459 caaattgaataaaagaaataagttaaaga 34995431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 35335 - 35409
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaat 190  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  35335 aaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaagccaaaaat 35409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 31101 - 31033
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  31101 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 31033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 79477 - 79403
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaat 190  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  79477 aaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaagccaaaaat 79403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 83711 - 83779
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  83711 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 83779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 202 - 134
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||    
T  202 aaagttaagacttatgggatcaaattgaataaaagaaataagttaagggactggcagatcaattaagcc 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 1651 - 1719
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||| | |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  1651 aaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 3714570 - 3714638
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3714570 aaagttaaaacttatgggaccaaattgaataaaagaaataagttaaggaaccggcagatcaattaagcc 3714638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 26364809 - 26364739
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  26364809 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagccaa 26364739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 43584476 - 43584408
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  43584476 aaagttaagacttatgagatcaaattgaataaaagaaataagttaatggaccgacagatcaattaagcc 43584408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 9244133 - 9244059
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaat 190  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||| |||||    
T  9244133 aaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcctaaaat 9244059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 9245481 - 9245550
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagtt-aaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  9245481 aaagttaagacttatgggaccaaattgaataaaagaaataagttaaaaggaccggcagatcatttaagcc 9245550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 30644754 - 30644819
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    ||||||||||||||||||| |||||| |||||||||||||| |||| |||||| ||||||||||||    
T  30644754 aaagttaagatttatgggaccaaattaaataaaagaaataaattaaggaaccgacagatcaattaa 30644819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 41638202 - 41638271
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    |||||||||| ||||| ||  ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  41638202 aaagttaagacttatgagaataaattgaataaaagaaataagttaagggaccggcagatcaattaagcca 41638271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 41636899 - 41636831
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||||| |||||||||| |||||||||||| |||| ||||||| ||||||||||||    
T  41636899 aaagttaagacttatgggaccaaattgaatgaaagaaataagtaaaaggaccggcaaatcaattaagcc 41636831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 30640855 - 30640801
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||||| |||||||||||||||||||||||||||| ||||||| |||||||||    
T  30640855 ttatgggaccaaattgaataaaagaaataagttaaaggaccggcatatcaattaa 30640801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 31203030 - 31202964
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||| || ||||| |||||||||||    
T  31203030 ttaagatttatgggaccaaaatgaataaaagaaataagttaaggaaacgacagattaattaagccaa 31202964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 20308991 - 20308923
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | ||||||||   |||||||||||||||||||||||| | ||||||||||||||||||||    
T  20308991 aaagttaaaacttatgggactcaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 20308923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 21095624 - 21095556
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | ||||||||   |||||||||||||||||||||||| | ||||||||||||||||||||    
T  21095624 aaagttaaaacttatgggactcaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 21095556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 34644010 - 34644081
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaa 188  Q
    ||||||||||||||||||| ||||||||||||||||||||||| || | |||| | |||||||||||| ||||    
T  34644010 aaagttaagatttatggga-caaattgaataaaagaaataagtcaagggaccgacggatcaattaagctaaaa 34644081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 43134099 - 43134167
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | |||| ||| |||||||||||||||||||||||||||| |||| || ||||||||||||    
T  43134099 aaagttaaaagttataggaccaaattgaataaaagaaataagttaaaggaccgacatatcaattaagcc 43134167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 522147 - 522214
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||| |||||| | |||||||||||||||||||||||||| | |||| ||||| ||||||||    
T  522147 aaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccgacagattaattaagc 522214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 26366247 - 26366313
Alignment:
Q  119 gttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    ||||||| |||||  | |||||| ||||||||||||||||||||| | |||||||||||||||||||    
T  26366247 gttaagacttatgaaaccaaattaaataaaagaaataagttaaaggatcggcagatcaattaagcca 26366313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 34642733 - 34642667
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaag 182  Q
    |||||||||| ||||  || ||||||||||||||||||||||||||   ||||||||||||||||||    
T  34642733 aaagttaagacttatatgaccaaattgaataaaagaaataagttaagagaccggcagatcaattaag 34642667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 43585998 - 43586059
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||| ||||| ||||||||| ||||||||||||||||||| | |||| ||||||||||||    
T  43585998 ttaagacttatgagatcaaattaaataaaagaaataagttaagggaccgacagatcaattaa 43586059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 22013288 - 22013357
Alignment:
Q  115 aaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||| |||||||| |||| ||||  ||||||||||||||| | ||| |||| |||||||||||    
T  22013288 aaaagttaagagttatgggaccaaactgaaataaagaaataagttaagggaccagcagttcaattaagcc 22013357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 163
Target Start/End: Complemental strand, 26364853 - 26364822
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaaag 163  Q
    ||||||||||||||||||||||||||||||||    
T  26364853 ggatcaaattgaataaaagaaataagttaaag 26364822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 20310106 - 20310172
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||| ||||| || |||| ||||||||||||||||||||| | ||  |||||| |||||||||||    
T  20310106 ttaagacttatgagaccaaaatgaataaaagaaataagttaagggacgagcagattaattaagccaa 20310172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 21096739 - 21096805
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||| ||||| || |||| ||||||||||||||||||||| | ||  |||||| |||||||||||    
T  21096739 ttaagacttatgagaccaaaatgaataaaagaaataagttaagggacgagcagattaattaagccaa 21096805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 22012226 - 22012157
Alignment:
Q  115 aaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||| ||||| || |||| ||||  ||||||||||||||| | |||| ||| |||||||||||    
T  22012226 aaaagttaagagttatgagaccaaactgaaataaagaaataagttaagggaccgacagttcaattaagcc 22012157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 30640909 - 30640880
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  30640909 ggatcaaattgaataaaagaaataagttaa 30640880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 30644710 - 30644739
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  30644710 ggatcaaattgaataaaagaaataagttaa 30644739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 43584520 - 43584491
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  43584520 ggatcaaattgaataaaagaaataagttaa 43584491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 38665941 - 38665989
Alignment:
Q  141 tgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||| ||||||| |||||||||| |||||  ||||||||||||||||||    
T  38665941 tgaacaaaagaattaagttaaaggaccgggtgatcaattaagccaaaaa 38665989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 7261593 - 7261661
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  7261593 aaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccggtagatcaattaagcc 7261661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 34122852 - 34122920
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||||    
T  34122852 aaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 34122920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 10802957 - 10802888
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| | | |||||||||||||||||||    
T  10802957 aaagttaaaatttatgggaccaaattgaataaaagaaataagttaagggatcggcagatcaattaagcca 10802888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 17356429 - 17356361
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  17356429 aaagttaagatttctggcatcaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 17356361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 17357913 - 17357978
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||||||| |||||| | |||||||||||||||||||||||||| | |||||||||||||||||    
T  17357913 aaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaattaa 17357978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 38031236 - 38031163
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| |||| ||| ||||||||||||||||||||| |||| | |||||||||||||||||||| ||||    
T  38031236 aaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcctaaaa 38031163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 48499436 - 48499367
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||| |   |||||||||||||||    
T  48499436 tgaaaaagttaagaattatgggaccaaattgaataaaagaaataagttaaggtggcggcagatcaattaa 48499367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 8815407 - 8815475
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  8815407 aaagttaagacttatgagaccaaattgaataaaagaaataagttaacggaccggcaaatcaattaagcc 8815475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 10804245 - 10804313
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | |||| ||| |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  10804245 aaagttaaaacttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 10804313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 22621935 - 22621867
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | || |||||||||||||||||    
T  22621935 aaagttaagacttatgagaccaaattgaataaaagaaataagttaagggactggcagatcaattaagcc 22621867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 34121367 - 34121299
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| || ||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  34121367 aaagttaagacttatgagaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 34121299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 23758021 - 23758088
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||| | ||||| ||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  23758021 aaagttaaaacttatgagactaaattgaataaaagaaataaattaaagaaccggcagatcaattaagc 23758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 38032470 - 38032540
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||||||| ||||  || ||||||||||||||||||||| |||| | ||||||||||||||||||||||    
T  38032470 aaagttaagacttatatgaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagccaa 38032540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 8814203 - 8814130
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||| | ||||  |||||||||||||| ||||    
T  8814203 aaagataagatttatgggactaaattgaataaaagaaataagttaagggaccgatagatcaattaagccgaaaa 8814130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 48463034 - 48463102
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| | ||||| || |||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  48463034 aaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcc 48463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 48501373 - 48501437
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaatta 180  Q
    |||||||||| |||||  | | ||||||||||||||||||||||||||||||| |||||||||||    
T  48501373 aaagttaagaattatgaaacctaattgaataaaagaaataagttaaagaaccgacagatcaatta 48501437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 56235070 - 56235138
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||| | || | |||||||||||||||    
T  56235070 aaagttaagacttatgagatcaaattgaataaaagaaataaattaagggactgacagatcaattaagcc 56235138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 48081636 - 48081705
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||||||||||| |||||| | ||||||||||||||| |||||||||| | |||| || |||||||||    
T  48081636 tgaaaaagttaagacttatggaaccaaattgaataaaaggaataagttaagggaccgacacatcaattaa 48081705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 18091648 - 18091580
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||  | |||||| ||||||||||||||||||| | | ||||||||||||||||||    
T  18091648 aaagttaagacttatgaaaccaaattaaataaaagaaataagttaagggatcggcagatcaattaagcc 18091580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 35191885 - 35191817
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||  | |||||||||||||||||||||||||| | ||||||  ||||||||||||    
T  35191885 aaagttaagacttatgaaaccaaattgaataaaagaaataagttaagggaccggcgaatcaattaagcc 35191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 35193246 - 35193312
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaag 182  Q
    ||||||||| |||||| || ||||||||||||||||||||| |||| | || ||||| |||||||||    
T  35193246 aaagttaagttttatgagaccaaattgaataaaagaaataaattaagggactggcaggtcaattaag 35193312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 48081580 - 48081625
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaa 161  Q
    |||||||||| ||||| || ||||||||||||||||||||||||||    
T  48081580 aaagttaagacttatgagaccaaattgaataaaagaaataagttaa 48081625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 56233792 - 56233723
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    |||||| ||| ||||| || |||||||||||||||||||||||||| | ||||  ||||| |||||||||    
T  56233792 aaagttgagacttatgcgaccaaattgaataaaagaaataagttaagggaccgatagatctattaagcca 56233723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 5433457 - 5433505
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaaga 164  Q
    |||||||| | |||| ||| |||||||||||||||||||||||||||||    
T  5433457 aaagttaaaacttataggaccaaattgaataaaagaaataagttaaaga 5433505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 48080338 - 48080270
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||  | |||||| |||||||||||||||||||   |||| |||||||||||||||    
T  48080338 aaagttaagacttatgaaaccaaattaaataaaagaaataagttaagtgaccgacagatcaattaagcc 48080270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 22624389 - 22624428
Alignment:
Q  145 taaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  22624389 taaaagaaataagttaagggaccggcagatcaattaagcc 22624428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 48081392 - 48081443
Alignment:
Q  131 gggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaag 182  Q
    |||| ||||||||||||||| |||||||||| | ||||||| ||||||||||    
T  48081392 gggaccaaattgaataaaaggaataagttaagggaccggcaaatcaattaag 48081443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 22623193 - 22623230
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaa 153  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  22623193 aaagttaagacttatgggaccaaattgaataaaagaaa 22623230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 34095709 - 34095754
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaa 161  Q
    |||||||||| ||||| || |||||||||||||| |||||||||||    
T  34095709 aaagttaagacttatgagaccaaattgaataaaaaaaataagttaa 34095754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 18819330 - 18819262
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  18819330 aaagttaagacttatgggatcaaattgaataaaaaaaataatttaaggaaccggcagatcaattaagcc 18819262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 51693215 - 51693141
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaat 190  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| | |||| ||||||||||||||| |||||    
T  51693215 aaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcctaaaat 51693141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 18820805 - 18820874
Alignment:
Q  115 aaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  18820805 aaaagttaagatttatgagaccaaattgaataaaagaaataagttaagggaccggtagatcaattaagcc 18820874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 25181569 - 25181496
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  25181569 aaagttaagacttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcaaaaaa 25181496  T

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Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 51468407 - 51468334
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||||| ||||| || |||||||||||||| ||||||||||| | |||||||||||||||||||||||||    
T  51468407 aaagttaagacttatgagaccaaattgaataaaaaaaataagttaagggaccggcagatcaattaagccaaaaa 51468334  T

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Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 52086695 - 52086622
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaa 189  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||| ||||    
T  52086695 aaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaaa 52086622  T

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Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 40187671 - 40187603
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  40187671 aaagttaagacttatgggaccaaattgaataaaagaaataagtgaaaggaccgtcagatcaattaagcc 40187603  T

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Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 51468947 - 51469019
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| | || | |||||||||||||||    
T  51468947 tgaaaaagttaagatttatgggaccaaattgaataaaaaaaataagttaagggactgacagatcaattaagcc 51469019  T

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Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 17244243 - 17244173
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaa 186  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||| |||||||||| | |||||||||||    
T  17244243 aaagttgagacttatgggaccaaattgaataaaagaaataagttaaggaaccggcaggttaattaagccaa 17244173  T

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Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 5488917 - 5488988
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaa 187  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||| | | |||| ||||||||||||||||    
T  5488917 aaagttaagacttatgggactaaattgaataaaagaaataagttaagggatcggcggatcaattaagccaaa 5488988  T

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Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 17245716 - 17245782
Alignment:
Q  118 agttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| ||||| || ||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  17245716 agttaagacttatgagaccaaattgaataaaagaaataaattaaggaaccggcggatcaattaagcc 17245782  T

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Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 45228340 - 45228283
Alignment:
Q  119 gttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatca 176  Q
    ||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  45228340 gttaaaatttatgggacaaaattaaataaaagaaataagttaaagaaccggcagatca 45228283  T

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Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 1823346 - 1823410
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||| ||||| ||  ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  1823346 ttaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 1823410  T

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Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 7110294 - 7110226
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||| ||| |||||| |||||||||||||| |||| | ||||||||||||||||||||    
T  7110294 aaagttaagacttataggaccaaattaaataaaagaaataaattaagggaccggcagatcaattaagcc 7110226  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 47533025 - 47532961
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaatta 180  Q
    |||||||||||||||| || |||||||||||||| |||||| |||| | ||||||||||||||||    
T  47533025 aaagttaagatttatgagaccaaattgaataaaaaaaataacttaagggaccggcagatcaatta 47532961  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 52761606 - 52761654
Alignment:
Q  136 caaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  52761606 caaattgaataaaagaaataagttaaggaaccggcatatcaattaagcc 52761654  T

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Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 50485046 - 50485108
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaat 178  Q
    |||||||||| ||||| || ||||||||||||| |||||||||||| | ||||||||||||||    
T  50485046 aaagttaagacttatgagaccaaattgaataaatgaaataagttaagggaccggcagatcaat 50485108  T

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Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 45229657 - 45229718
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaa 181  Q
    |||||||||||| || ||||||||||||||||||||| |||| | |||| ||||||||||||    
T  45229657 ttaagatttatgagaccaaattgaataaaagaaataaattaagggaccgacagatcaattaa 45229718  T

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Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 50483574 - 50483511
Alignment:
Q  120 ttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||| ||||| || ||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  50483574 ttaagacttatgagaccaaattgaatacaagaaataagttaaag-accgacagatcaattaagcc 50483511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 52759431 - 52759363
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||||| |||||  | |||||| ||||||||||||||||||| | | ||||||||||||||||||    
T  52759431 aaagttaagacttatgaaaccaaattaaataaaagaaataagttaagggatcggcagatcaattaagcc 52759363  T

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Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 5488569 - 5488502
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagc 183  Q
    |||||||||  |||||| ||||||||||||||||||||||| |||| | |||  ||||||||||||||    
T  5488569 aaagttaagtcttatggaatcaaattgaataaaagaaataaattaagggaccaacagatcaattaagc 5488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 7111525 - 7111595
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaa 187  Q
    |||||||||| |||| ||| ||||||||||||||||||||| |||| ||||||| |||| ||||||| ||||    
T  7111525 aaagttaagacttataggaccaaattgaataaaagaaataaattaaggaaccgggagat-aattaagtcaaa 7111595  T

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Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 40723097 - 40723162
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagccaaaaatct 192  Q
    |||| ||||||| ||||| ||||||| |||||||||| ||||| || ||||||||||| |||||||    
T  40723097 ttataggatcaatttgaaaaaaagaattaagttaaaggaccgggagttcaattaagcctaaaatct 40723162  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 163
Target Start/End: Complemental strand, 5488613 - 5488582
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaaag 163  Q
    ||||||||||||||||||||||||||||||||    
T  5488613 ggatcaaattgaataaaagaaataagttaaag 5488582  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 166
Target Start/End: Complemental strand, 45228383 - 45228353
Alignment:
Q  136 caaattgaataaaagaaataagttaaagaac 166  Q
    |||||||||||||||||||||||||||||||    
T  45228383 caaattgaataaaagaaataagttaaagaac 45228353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 47533900 - 47533970
Alignment:
Q  112 tgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaag 182  Q
    |||||||||||| | ||||||||  ||||| |||||||||||||| ||||   ||| ||||||||||||||    
T  47533900 tgaaaaagttaaaacttatgggactaaattaaataaaagaaataatttaagagaccagcagatcaattaag 47533970  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 45229609 - 45229638
Alignment:
Q  132 ggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  45229609 ggatcaaattgaataaaagaaataagttaa 45229638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 52087824 - 52087869
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaa 161  Q
    ||||||||||  |||| || ||||||||||||||||||||||||||    
T  52087824 aaagttaagacatatgagaccaaattgaataaaagaaataagttaa 52087869  T

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Target: scaffold0878 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 3071 - 3145
Alignment:
Q  110 tctgaaaaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||||||| | || |||||||||||||||||    
T  3071 tctgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggactggcagatcaattaagcc 3145  T

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Target: scaffold0018 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 25395 - 25464
Alignment:
Q  116 aaagttaagatttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcca 185  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| | | |||||||||||||||||||    
T  25395 aaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggagcggcagatcaattaagcca 25464  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 104358 - 104301
Alignment:
Q  127 ttatgggatcaaattgaataaaagaaataagttaaagaaccggcagatcaattaagcc 184  Q
    |||||||| |||||||||||||||||||||||||| | |||| || ||||||||||||    
T  104358 ttatgggaccaaattgaataaaagaaataagttaagggaccgtcaaatcaattaagcc 104301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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