View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21508_high_14 (Length: 287)
Name: NF21508_high_14
Description: NF21508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21508_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 17 - 276
Target Start/End: Original strand, 20425515 - 20425774
Alignment:
| Q |
17 |
atatatctctagagttttatcatgtatcttccacggggtagaatttttgtgacctttgtcaaagtcataccatgttcaccatctgagtgttttgcttagt |
116 |
Q |
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| T |
20425515 |
atatatctctagagttttatcatatttcttccatggggtagaatttttgtgacctttgtcaaagtcataccatgttcaccatctgagtgttttgcttagt |
20425614 |
T |
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| Q |
117 |
aattttccccttttaagcttggcgtagcttcccctaatccgtgaaggatatttcacatcattaatgtttcaagtctaggttacttcataactcttattga |
216 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20425615 |
aattttccccttttaagctaggcgtagcttcccctaatccgtgaaggatatttcacatcattaatgtttcaagtctaggttacttcataactcttattga |
20425714 |
T |
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| Q |
217 |
cctacttttattttcattcttaatttttcaaattaagtgccattaggcttacacaggttc |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| |
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| T |
20425715 |
cctacttttattttcattcttaatttttcaaattaagtgccattaagcttagacaagttc |
20425774 |
T |
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