View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21508_low_19 (Length: 254)
Name: NF21508_low_19
Description: NF21508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21508_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 48862246 - 48861997
Alignment:
| Q |
1 |
taactttctaatcaattaagatttttaatttcttttactatatttttcgctctaaaaatatagattgttgagttgtcgtaaaacaacttaacgagaatct |
100 |
Q |
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| T |
48862246 |
taactttctaatcaattaagatttttaatttcttttactatatttttcgctctaaaaatatagattgttgagttgtcgtaaaacaacttaacgaaaatct |
48862147 |
T |
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| Q |
101 |
taaaaattaaatcgaataatagagacaattcatttattttttaaccgaagaaaatgccaactttgttttatctttcgggtaaagataaaagatatttaag |
200 |
Q |
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| T |
48862146 |
taaaaattaaatcgaatagtagagacaataaatttattttttaactgaagaaaatgccaactttgttttatctttcgggtaaagataaaacatatttaag |
48862047 |
T |
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| Q |
201 |
ttattatactccatattcac---acattgttgatgatgcagttgatgatg |
247 |
Q |
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| T |
48862046 |
ttattatactccatattcacacaacattgttgatgatgcagttgatgatg |
48861997 |
T |
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