View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2150_low_15 (Length: 259)
Name: NF2150_low_15
Description: NF2150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2150_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 52805273 - 52805046
Alignment:
| Q |
17 |
acctccaatcttacacctcgattccgtcgccaacaatcatgcagcaccattgagttcaatttcaatgataaaagggaaacaacaaagccggtctttgatt |
116 |
Q |
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| T |
52805273 |
acctccaatcttacacctcgattccgtcgccaacaatcatgcagcaccattgagttcaatttcaatgataaaagggaaacaacaaagccggtctttgatt |
52805174 |
T |
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| Q |
117 |
ccattgcaagcatggaaggtaaagaagtaaagattagtcttgcacttggcaatgatgattcaagtgaaaaggtgggaaatataaccgatacagcgctaca |
216 |
Q |
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| T |
52805173 |
ccattgcaagcatggaaggtaaagaagtaaagattagtcttgcacttggcaatgatgattcaagtgaaaaggtgggaaatataaccgatacagcgctaca |
52805074 |
T |
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| Q |
217 |
acaagctcatgtttgtaaactattgcag |
244 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
52805073 |
acaagctcatgtttgtaaactattgcag |
52805046 |
T |
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