View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21513_low_1 (Length: 822)

Name: NF21513_low_1
Description: NF21513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21513_low_1
NF21513_low_1
[»] chr4 (97 HSPs)
chr4 (643-822)||(843014-843193)
chr4 (268-492)||(842193-842417)
chr4 (1-127)||(842576-842702)
chr4 (482-636)||(3649584-3649738)
chr4 (449-609)||(33552793-33552953)
chr4 (449-609)||(23521855-23522015)
chr4 (449-637)||(44324293-44324481)
chr4 (449-609)||(50727864-50728024)
chr4 (449-609)||(50735878-50736038)
chr4 (449-620)||(21579990-21580161)
chr4 (482-609)||(43641074-43641201)
chr4 (495-636)||(22318381-22318522)
chr4 (460-609)||(32181238-32181387)
chr4 (449-609)||(9807131-9807290)
chr4 (449-609)||(33176983-33177143)
chr4 (496-620)||(47642489-47642613)
chr4 (449-609)||(55593860-55594020)
chr4 (481-604)||(1231291-1231414)
chr4 (449-609)||(24002313-24002474)
chr4 (449-604)||(36885912-36886067)
chr4 (483-637)||(37865699-37865854)
chr4 (482-620)||(2725117-2725254)
chr4 (496-626)||(41711805-41711935)
chr4 (496-609)||(29785535-29785648)
chr4 (524-637)||(41720790-41720903)
chr4 (496-609)||(56154596-56154709)
chr4 (449-637)||(24210264-24210454)
chr4 (449-609)||(49152051-49152210)
chr4 (482-625)||(50178476-50178620)
chr4 (482-609)||(9512324-9512451)
chr4 (482-609)||(20802515-20802642)
chr4 (449-604)||(38812500-38812655)
chr4 (482-625)||(52949680-52949822)
chr4 (482-609)||(55065317-55065444)
chr4 (520-637)||(29616116-29616234)
chr4 (483-609)||(37695526-37695652)
chr4 (483-637)||(43739408-43739562)
chr4 (483-636)||(53200628-53200782)
chr4 (483-620)||(38486242-38486379)
chr4 (460-609)||(54542965-54543113)
chr4 (469-609)||(2786939-2787079)
chr4 (482-637)||(44649148-44649301)
chr4 (449-609)||(46680461-46680621)
chr4 (449-604)||(4325771-4325926)
chr4 (593-643)||(842142-842192)
chr4 (482-604)||(21202720-21202841)
chr4 (482-600)||(34929899-34930017)
chr4 (496-598)||(52319309-52319411)
chr4 (484-609)||(7001829-7001952)
chr4 (496-609)||(20518020-20518133)
chr4 (496-609)||(36743686-36743799)
chr4 (496-625)||(50186487-50186616)
chr4 (449-609)||(29592870-29593030)
chr4 (486-609)||(7554945-7555068)
chr4 (483-625)||(26083297-26083440)
chr4 (482-609)||(36497192-36497319)
chr4 (449-620)||(39078625-39078796)
chr4 (527-609)||(14296572-14296654)
chr4 (527-609)||(14314820-14314902)
chr4 (482-604)||(20694351-20694473)
chr4 (61-122)||(10452891-10452952)
chr4 (496-565)||(28115271-28115340)
chr4 (483-619)||(9947894-9948030)
chr4 (482-604)||(23327897-23328021)
chr4 (495-637)||(45577689-45577829)
chr4 (483-609)||(11056017-11056143)
chr4 (483-601)||(12600869-12600987)
chr4 (482-619)||(44355838-44355976)
chr4 (496-620)||(47361411-47361531)
chr4 (483-565)||(50729527-50729609)
chr4 (540-609)||(985257-985326)
chr4 (496-609)||(37931895-37932008)
chr4 (461-609)||(6776553-6776701)
chr4 (521-633)||(31445899-31446010)
chr4 (527-602)||(56487281-56487356)
chr4 (483-585)||(37859244-37859346)
chr4 (497-619)||(43189762-43189883)
chr4 (449-566)||(2629902-2630019)
chr4 (521-609)||(7381255-7381340)
chr4 (454-551)||(25978567-25978664)
chr4 (528-609)||(41261974-41262055)
chr4 (524-609)||(42772733-42772818)
chr4 (482-609)||(42869948-42870073)
chr4 (527-582)||(2858400-2858455)
chr4 (779-822)||(16010716-16010759)
chr4 (498-609)||(32858298-32858408)
chr4 (569-620)||(44640302-44640353)
chr4 (521-618)||(3579089-3579187)
chr4 (496-637)||(16320468-16320607)
chr4 (482-619)||(21098498-21098636)
chr4 (499-601)||(43893560-43893662)
chr4 (495-585)||(52673810-52673900)
chr4 (486-609)||(30942763-30942886)
chr4 (509-575)||(39513431-39513497)
chr4 (521-595)||(40792406-40792480)
chr4 (779-813)||(54779167-54779201)
chr4 (521-566)||(34559968-34560013)
[»] chr2 (60 HSPs)
chr2 (3-127)||(25383936-25384061)
chr2 (643-822)||(25384365-25384550)
chr2 (449-620)||(7761531-7761702)
chr2 (460-609)||(16104246-16104395)
chr2 (449-637)||(41366068-41366253)
chr2 (483-628)||(25383084-25383235)
chr2 (496-609)||(37003873-37003986)
chr2 (449-609)||(5278792-5278952)
chr2 (449-609)||(33366582-33366742)
chr2 (482-609)||(2645077-2645204)
chr2 (482-620)||(19513680-19513818)
chr2 (472-594)||(26796216-26796337)
chr2 (483-609)||(44284601-44284727)
chr2 (449-637)||(32766462-32766651)
chr2 (482-609)||(17540686-17540814)
chr2 (449-609)||(32497887-32498047)
chr2 (449-601)||(42706339-42706491)
chr2 (497-604)||(9717201-9717308)
chr2 (449-604)||(35114762-35114917)
chr2 (483-609)||(9732922-9733048)
chr2 (482-620)||(33889204-33889342)
chr2 (449-609)||(7258868-7259029)
chr2 (483-604)||(26418900-26419021)
chr2 (449-609)||(34338782-34338942)
chr2 (496-637)||(40832474-40832617)
chr2 (449-636)||(6896113-6896300)
chr2 (498-609)||(30326338-30326449)
chr2 (483-609)||(41934553-41934679)
chr2 (496-609)||(4641488-4641601)
chr2 (449-637)||(37308599-37308787)
chr2 (482-625)||(13829394-13829537)
chr2 (484-619)||(18278874-18278999)
chr2 (483-601)||(12939292-12939410)
chr2 (483-609)||(18685808-18685934)
chr2 (496-609)||(12672479-12672592)
chr2 (496-637)||(45463115-45463255)
chr2 (449-609)||(10399828-10399988)
chr2 (496-604)||(30798494-30798602)
chr2 (482-609)||(3913451-3913578)
chr2 (449-552)||(38623262-38623365)
chr2 (496-637)||(2086015-2086157)
chr2 (482-609)||(40692277-40692396)
chr2 (496-637)||(27462807-27462946)
chr2 (527-609)||(18793297-18793379)
chr2 (482-619)||(1230873-1231010)
chr2 (496-557)||(1247171-1247232)
chr2 (496-609)||(11114844-11114957)
chr2 (540-637)||(20907533-20907630)
chr2 (505-637)||(35473014-35473146)
chr2 (449-609)||(42365549-42365709)
chr2 (496-599)||(16177888-16177991)
chr2 (482-637)||(28824548-28824703)
chr2 (482-609)||(38993062-38993189)
chr2 (497-609)||(39461286-39461401)
chr2 (527-606)||(7294427-7294506)
chr2 (482-625)||(30712813-30712959)
chr2 (779-822)||(21186640-21186683)
chr2 (779-818)||(26144332-26144371)
chr2 (543-606)||(31148784-31148847)
chr2 (527-584)||(16062130-16062186)
[»] chr5 (51 HSPs)
chr5 (449-625)||(3735313-3735489)
chr5 (482-609)||(40489309-40489436)
chr5 (482-609)||(39918479-39918606)
chr5 (496-637)||(31644390-31644531)
chr5 (482-637)||(41790459-41790615)
chr5 (482-609)||(2351652-2351779)
chr5 (482-609)||(32528687-32528814)
chr5 (449-637)||(32092946-32093133)
chr5 (449-609)||(34794859-34795019)
chr5 (449-604)||(21739125-21739280)
chr5 (482-620)||(39788153-39788292)
chr5 (483-609)||(4818138-4818264)
chr5 (496-637)||(24036176-24036315)
chr5 (482-620)||(31880073-31880211)
chr5 (496-637)||(4689709-4689850)
chr5 (496-609)||(7208241-7208354)
chr5 (483-604)||(22493417-22493537)
chr5 (449-601)||(7523152-7523304)
chr5 (483-609)||(553368-553495)
chr5 (483-625)||(18470426-18470568)
chr5 (483-609)||(28090518-28090644)
chr5 (496-625)||(7770290-7770419)
chr5 (449-606)||(17031132-17031289)
chr5 (496-609)||(41459561-41459674)
chr5 (449-609)||(29241350-29241510)
chr5 (482-609)||(24181621-24181748)
chr5 (483-637)||(8560980-8561133)
chr5 (483-609)||(11963313-11963439)
chr5 (482-604)||(35701254-35701376)
chr5 (483-620)||(6311658-6311794)
chr5 (496-609)||(40182436-40182549)
chr5 (496-604)||(700612-700720)
chr5 (482-609)||(31770588-31770715)
chr5 (496-609)||(5571655-5571766)
chr5 (483-609)||(23091302-23091428)
chr5 (497-609)||(6284310-6284423)
chr5 (495-592)||(27839083-27839180)
chr5 (496-604)||(5673121-5673224)
chr5 (483-609)||(7725807-7725933)
chr5 (482-566)||(8136852-8136936)
chr5 (482-601)||(22432306-22432425)
chr5 (539-601)||(612520-612582)
chr5 (779-822)||(9895154-9895197)
chr5 (779-822)||(15086705-15086748)
chr5 (482-619)||(35760622-35760761)
chr5 (527-609)||(8360395-8360476)
chr5 (540-600)||(1338601-1338661)
chr5 (565-637)||(32313782-32313854)
chr5 (520-566)||(5598495-5598541)
chr5 (551-620)||(35954974-35955044)
chr5 (478-563)||(11090861-11090946)
[»] chr1 (80 HSPs)
chr1 (482-620)||(17327715-17327853)
chr1 (460-636)||(39281848-39282024)
chr1 (496-637)||(38663085-38663226)
chr1 (449-609)||(844757-844917)
chr1 (449-609)||(16476188-16476348)
chr1 (449-609)||(26118248-26118408)
chr1 (483-625)||(11772699-11772841)
chr1 (498-636)||(15539972-15540110)
chr1 (449-637)||(13994108-13994296)
chr1 (496-604)||(1601159-1601267)
chr1 (449-609)||(16386835-16386995)
chr1 (482-609)||(42510506-42510633)
chr1 (449-609)||(6711079-6711239)
chr1 (452-619)||(6771338-6771506)
chr1 (449-609)||(16451108-16451268)
chr1 (497-609)||(31004113-31004225)
chr1 (482-625)||(6029367-6029510)
chr1 (483-609)||(28340370-28340496)
chr1 (482-604)||(30105746-30105868)
chr1 (483-609)||(45490942-45491068)
chr1 (460-609)||(16437343-16437492)
chr1 (461-609)||(10384348-10384496)
chr1 (520-620)||(46154870-46154970)
chr1 (472-620)||(50382459-50382607)
chr1 (482-609)||(12890219-12890346)
chr1 (496-603)||(16704713-16704820)
chr1 (482-609)||(35387377-35387504)
chr1 (482-609)||(42512836-42512963)
chr1 (449-637)||(17887899-17888089)
chr1 (483-609)||(25539836-25539962)
chr1 (483-640)||(41967916-41968074)
chr1 (483-625)||(50304616-50304758)
chr1 (543-619)||(30798818-30798894)
chr1 (482-609)||(32270334-32270461)
chr1 (449-619)||(32289377-32289547)
chr1 (551-637)||(47092977-47093063)
chr1 (495-637)||(570339-570483)
chr1 (482-591)||(26764861-26764970)
chr1 (483-604)||(41972898-41973018)
chr1 (449-637)||(44738075-44738263)
chr1 (482-602)||(1351501-1351621)
chr1 (449-625)||(6144019-6144195)
chr1 (449-609)||(7183899-7184059)
chr1 (483-631)||(45658780-45658928)
chr1 (505-620)||(32467910-32468025)
chr1 (449-609)||(24339671-24339830)
chr1 (483-609)||(51264476-51264602)
chr1 (496-637)||(25343289-25343430)
chr1 (496-609)||(49303434-49303546)
chr1 (496-609)||(50540325-50540438)
chr1 (521-637)||(15324110-15324226)
chr1 (483-589)||(46447665-46447771)
chr1 (484-633)||(504459-504608)
chr1 (549-609)||(4895374-4895434)
chr1 (496-604)||(42705318-42705426)
chr1 (540-606)||(29032547-29032612)
chr1 (483-620)||(31574323-31574461)
chr1 (449-574)||(7837149-7837274)
chr1 (531-620)||(20495006-20495095)
chr1 (546-619)||(49799348-49799421)
chr1 (449-601)||(5109718-5109869)
chr1 (495-606)||(16862491-16862602)
chr1 (483-574)||(26733571-26733662)
chr1 (521-604)||(34663913-34663996)
chr1 (503-609)||(2761643-2761748)
chr1 (551-637)||(34283953-34284039)
chr1 (540-637)||(32215347-32215444)
chr1 (569-625)||(7836565-7836621)
chr1 (469-565)||(38087049-38087145)
chr1 (546-618)||(47242645-47242716)
chr1 (521-609)||(51703268-51703355)
chr1 (482-601)||(3414919-3415038)
chr1 (506-565)||(16643272-16643331)
chr1 (495-598)||(39792800-39792902)
chr1 (521-609)||(43310377-43310466)
chr1 (779-822)||(44402555-44402598)
chr1 (521-620)||(40856111-40856216)
chr1 (540-601)||(30104980-30105041)
chr1 (521-566)||(40610746-40610791)
chr1 (503-584)||(46815816-46815897)
[»] scaffold0181 (1 HSPs)
scaffold0181 (496-609)||(19101-19214)
[»] chr8 (66 HSPs)
chr8 (456-609)||(5968844-5968997)
chr8 (449-609)||(30542995-30543155)
chr8 (455-625)||(10656665-10656835)
chr8 (449-637)||(29563199-29563388)
chr8 (449-609)||(34063100-34063260)
chr8 (449-599)||(4052462-4052612)
chr8 (483-609)||(12753332-12753458)
chr8 (483-609)||(31732036-31732162)
chr8 (449-609)||(8673028-8673188)
chr8 (449-609)||(29672296-29672456)
chr8 (449-609)||(32019974-32020134)
chr8 (521-625)||(41548574-41548678)
chr8 (468-636)||(45114000-45114168)
chr8 (482-609)||(6386548-6386675)
chr8 (449-604)||(7394787-7394942)
chr8 (482-625)||(7591453-7591596)
chr8 (449-620)||(15001428-15001598)
chr8 (483-609)||(27103931-27104057)
chr8 (483-620)||(14005051-14005188)
chr8 (496-609)||(25478215-25478328)
chr8 (496-625)||(30501101-30501230)
chr8 (449-637)||(31513556-31513745)
chr8 (496-609)||(45446427-45446540)
chr8 (449-637)||(35225606-35225794)
chr8 (449-609)||(37618365-37618525)
chr8 (449-609)||(37664256-37664416)
chr8 (522-609)||(10531250-10531337)
chr8 (482-609)||(16595155-16595282)
chr8 (482-609)||(32303591-32303718)
chr8 (482-609)||(41709749-41709876)
chr8 (483-625)||(10467020-10467162)
chr8 (496-609)||(3251676-3251789)
chr8 (496-609)||(13406955-13407068)
chr8 (495-619)||(54133-54256)
chr8 (482-625)||(22999213-22999357)
chr8 (449-636)||(29611028-29611215)
chr8 (483-604)||(17805667-17805789)
chr8 (483-584)||(36426254-36426355)
chr8 (496-625)||(39642839-39642968)
chr8 (521-633)||(15351684-15351795)
chr8 (449-625)||(16485782-16485958)
chr8 (496-620)||(34101469-34101593)
chr8 (449-609)||(40389012-40389172)
chr8 (498-609)||(10932708-10932819)
chr8 (503-620)||(10320304-10320421)
chr8 (499-625)||(6460219-6460344)
chr8 (482-565)||(21272700-21272783)
chr8 (496-601)||(27109561-27109666)
chr8 (508-619)||(14958921-14959031)
chr8 (524-602)||(11926878-11926956)
chr8 (551-620)||(28746284-28746353)
chr8 (522-602)||(11944854-11944934)
chr8 (540-636)||(37474664-37474760)
chr8 (522-609)||(5859518-5859605)
chr8 (498-601)||(17520583-17520678)
chr8 (522-599)||(3361789-3361866)
chr8 (553-609)||(18297444-18297498)
chr8 (540-599)||(3394309-3394369)
chr8 (779-822)||(1592037-1592080)
chr8 (506-589)||(7722261-7722344)
chr8 (550-609)||(14012316-14012375)
chr8 (521-575)||(5892074-5892128)
chr8 (580-637)||(9624181-9624239)
chr8 (495-585)||(22756430-22756520)
chr8 (793-822)||(16824394-16824423)
chr8 (523-637)||(38260805-38260920)
[»] chr7 (74 HSPs)
chr7 (483-636)||(48445470-48445623)
chr7 (521-637)||(15035284-15035400)
chr7 (449-609)||(26371768-26371928)
chr7 (449-609)||(40753131-40753291)
chr7 (449-604)||(44748676-44748831)
chr7 (496-637)||(18386472-18386614)
chr7 (496-625)||(26652826-26652955)
chr7 (449-609)||(11321844-11322004)
chr7 (449-609)||(36769528-36769688)
chr7 (482-609)||(30849238-30849365)
chr7 (483-625)||(34295397-34295539)
chr7 (483-609)||(47953166-47953292)
chr7 (449-609)||(21784847-21785007)
chr7 (449-609)||(26994184-26994344)
chr7 (449-609)||(29661299-29661459)
chr7 (483-630)||(329425-329572)
chr7 (483-609)||(46633673-46633799)
chr7 (496-637)||(23349297-23349438)
chr7 (449-609)||(10932516-10932676)
chr7 (524-616)||(29992729-29992820)
chr7 (449-609)||(47316657-47316817)
chr7 (482-609)||(18470660-18470787)
chr7 (449-609)||(41211159-41211320)
chr7 (496-637)||(30599014-30599156)
chr7 (482-620)||(38301308-38301445)
chr7 (483-625)||(48699358-48699500)
chr7 (483-619)||(29372772-29372908)
chr7 (482-637)||(32873761-32873917)
chr7 (469-609)||(48894693-48894833)
chr7 (482-620)||(1870099-1870238)
chr7 (498-637)||(9913473-9913612)
chr7 (498-637)||(9927161-9927300)
chr7 (540-635)||(41903604-41903699)
chr7 (482-637)||(43368149-43368304)
chr7 (483-601)||(3922696-3922814)
chr7 (483-609)||(17237052-17237178)
chr7 (503-601)||(21133356-21133454)
chr7 (520-609)||(47947736-47947825)
chr7 (449-609)||(22724490-22724650)
chr7 (449-609)||(43158645-43158805)
chr7 (482-609)||(3892018-3892145)
chr7 (482-625)||(41665567-41665710)
chr7 (496-601)||(22631722-22631827)
chr7 (496-637)||(34117400-34117541)
chr7 (496-625)||(43213931-43214060)
chr7 (496-609)||(46408865-46408978)
chr7 (496-609)||(46448650-46448763)
chr7 (483-609)||(43189235-43189362)
chr7 (496-637)||(1363585-1363725)
chr7 (496-601)||(20127273-20127378)
chr7 (484-605)||(30052925-30053046)
chr7 (496-609)||(46627146-46627259)
chr7 (521-625)||(30259938-30260042)
chr7 (449-565)||(34519528-34519644)
chr7 (521-585)||(42332059-42332123)
chr7 (560-619)||(3359911-3359970)
chr7 (528-606)||(44668786-44668865)
chr7 (449-630)||(37966929-37967110)
chr7 (539-605)||(8083785-8083847)
chr7 (521-609)||(21408331-21408419)
chr7 (449-565)||(26910369-26910485)
chr7 (521-636)||(29455880-29455992)
chr7 (483-619)||(35645413-35645548)
chr7 (527-615)||(38360041-38360129)
chr7 (487-582)||(42072995-42073090)
chr7 (779-821)||(20204247-20204289)
chr7 (499-609)||(21408635-21408744)
chr7 (496-620)||(11250587-11250706)
chr7 (546-602)||(45063622-45063678)
chr7 (766-822)||(47045780-47045836)
chr7 (766-821)||(3262871-3262926)
chr7 (546-601)||(16963092-16963147)
chr7 (482-637)||(22724024-22724179)
chr7 (495-577)||(7958634-7958715)
[»] scaffold0169 (2 HSPs)
scaffold0169 (449-609)||(18018-18178)
scaffold0169 (482-609)||(12533-12660)
[»] chr6 (57 HSPs)
chr6 (449-609)||(10324108-10324268)
chr6 (453-635)||(7396127-7396306)
chr6 (482-636)||(10485102-10485256)
chr6 (482-620)||(32409882-32410020)
chr6 (449-637)||(2614839-2615028)
chr6 (449-609)||(17443234-17443394)
chr6 (482-609)||(3932837-3932964)
chr6 (496-609)||(17867807-17867920)
chr6 (496-609)||(17877590-17877703)
chr6 (496-620)||(24242625-24242749)
chr6 (482-637)||(10959944-10960099)
chr6 (482-609)||(11613821-11613948)
chr6 (449-619)||(29054319-29054488)
chr6 (483-609)||(34176802-34176928)
chr6 (456-609)||(18057491-18057644)
chr6 (449-609)||(14925453-14925613)
chr6 (482-609)||(3259655-3259782)
chr6 (482-609)||(24203335-24203461)
chr6 (522-620)||(7365348-7365446)
chr6 (482-592)||(9902688-9902798)
chr6 (496-637)||(31870144-31870285)
chr6 (482-609)||(11279100-11279227)
chr6 (482-609)||(15277310-15277437)
chr6 (482-609)||(32132410-32132537)
chr6 (449-605)||(11382040-11382194)
chr6 (496-604)||(34684027-34684136)
chr6 (496-620)||(166967-167091)
chr6 (483-601)||(3379690-3379808)
chr6 (495-637)||(18597201-18597343)
chr6 (496-601)||(8177925-8178030)
chr6 (449-609)||(15276934-15277094)
chr6 (449-625)||(32860007-32860183)
chr6 (498-609)||(11212229-11212340)
chr6 (486-609)||(16542309-16542432)
chr6 (496-585)||(4494159-4494248)
chr6 (540-619)||(29424655-29424734)
chr6 (540-606)||(8844422-8844488)
chr6 (521-611)||(9613944-9614034)
chr6 (511-637)||(27756249-27756375)
chr6 (500-638)||(27824698-27824836)
chr6 (483-637)||(35004159-35004313)
chr6 (482-618)||(3290635-3290769)
chr6 (483-636)||(5650735-5650888)
chr6 (496-609)||(14808045-14808157)
chr6 (549-605)||(32614035-32614091)
chr6 (779-821)||(6074035-6074077)
chr6 (724-770)||(11602811-11602857)
chr6 (521-603)||(15400654-15400736)
chr6 (521-603)||(15412441-15412523)
chr6 (521-603)||(15428035-15428117)
chr6 (785-821)||(6073755-6073791)
chr6 (779-819)||(6074523-6074563)
chr6 (569-609)||(10552749-10552789)
chr6 (779-822)||(34490781-34490824)
chr6 (779-821)||(6294545-6294587)
chr6 (569-635)||(13412644-13412710)
chr6 (569-630)||(29203043-29203104)
[»] scaffold0208 (1 HSPs)
scaffold0208 (449-620)||(2302-2473)
[»] chr3 (66 HSPs)
chr3 (449-616)||(3964255-3964421)
chr3 (483-637)||(31883008-31883162)
chr3 (495-636)||(3867647-3867788)
chr3 (472-609)||(53557770-53557907)
chr3 (449-609)||(28675763-28675923)
chr3 (449-609)||(39052790-39052950)
chr3 (449-637)||(51925160-51925348)
chr3 (482-620)||(20609633-20609771)
chr3 (496-609)||(1344706-1344819)
chr3 (449-609)||(2135043-2135203)
chr3 (483-599)||(8648543-8648659)
chr3 (449-609)||(34351320-34351480)
chr3 (496-604)||(42636402-42636510)
chr3 (449-609)||(44116912-44117072)
chr3 (449-609)||(51259732-51259892)
chr3 (482-625)||(33364763-33364906)
chr3 (482-609)||(47958417-47958544)
chr3 (482-604)||(38213332-38213454)
chr3 (497-619)||(44000224-44000346)
chr3 (483-609)||(49748897-49749023)
chr3 (459-609)||(54622758-54622908)
chr3 (483-620)||(34026629-34026766)
chr3 (497-609)||(5442264-5442376)
chr3 (449-609)||(12349123-12349283)
chr3 (482-637)||(40094447-40094603)
chr3 (521-625)||(41694925-41695029)
chr3 (482-609)||(20255018-20255144)
chr3 (482-609)||(21221345-21221472)
chr3 (482-609)||(26282372-26282499)
chr3 (482-609)||(29584848-29584975)
chr3 (496-609)||(4851455-4851568)
chr3 (483-604)||(25860407-25860528)
chr3 (496-601)||(29646047-29646152)
chr3 (449-609)||(3864627-3864786)
chr3 (449-609)||(24571254-24571414)
chr3 (482-602)||(25927312-25927432)
chr3 (483-625)||(25954408-25954549)
chr3 (483-584)||(14155447-14155547)
chr3 (449-565)||(19906779-19906895)
chr3 (449-619)||(51296544-51296714)
chr3 (496-609)||(50386455-50386568)
chr3 (495-637)||(28624918-28625059)
chr3 (527-609)||(32621842-32621924)
chr3 (496-565)||(21373947-21374016)
chr3 (546-630)||(389396-389479)
chr3 (521-609)||(3695316-3695404)
chr3 (534-625)||(10747174-10747266)
chr3 (729-821)||(18267964-18268056)
chr3 (482-565)||(50678815-50678898)
chr3 (524-606)||(44267718-44267800)
chr3 (495-633)||(49107135-49107273)
chr3 (546-619)||(25395577-25395650)
chr3 (495-619)||(8067055-8067179)
chr3 (549-637)||(16145873-16145961)
chr3 (449-625)||(22484695-22484871)
chr3 (529-592)||(19190653-19190716)
chr3 (779-822)||(21768613-21768656)
chr3 (482-565)||(24721502-24721585)
chr3 (548-603)||(32538586-32538641)
chr3 (537-619)||(47041559-47041644)
chr3 (525-603)||(51813371-51813449)
chr3 (520-609)||(45690924-45691012)
chr3 (548-609)||(53046692-53046753)
chr3 (560-620)||(30258835-30258895)
chr3 (779-822)||(47542542-47542585)
chr3 (781-822)||(49636837-49636878)
[»] scaffold0155 (1 HSPs)
scaffold0155 (495-619)||(33554-33678)
[»] scaffold0650 (1 HSPs)
scaffold0650 (483-637)||(1641-1795)
[»] scaffold0098 (1 HSPs)
scaffold0098 (483-620)||(51400-51536)
[»] scaffold0025 (1 HSPs)
scaffold0025 (496-625)||(5451-5580)
[»] scaffold0280 (1 HSPs)
scaffold0280 (449-625)||(13651-13827)
[»] scaffold0014 (1 HSPs)
scaffold0014 (483-609)||(101921-102047)
[»] scaffold0004 (1 HSPs)
scaffold0004 (483-609)||(372962-373088)
[»] scaffold0054 (2 HSPs)
scaffold0054 (483-634)||(19854-20005)
scaffold0054 (483-609)||(23549-23673)
[»] scaffold0360 (2 HSPs)
scaffold0360 (495-609)||(13589-13703)
scaffold0360 (483-620)||(15379-15512)
[»] scaffold0027 (1 HSPs)
scaffold0027 (483-609)||(15144-15270)
[»] scaffold0021 (2 HSPs)
scaffold0021 (483-619)||(108303-108436)
scaffold0021 (483-619)||(111073-111206)
[»] scaffold0957 (1 HSPs)
scaffold0957 (449-637)||(2460-2648)
[»] scaffold0062 (1 HSPs)
scaffold0062 (539-619)||(3682-3762)
[»] scaffold0729 (1 HSPs)
scaffold0729 (461-609)||(4555-4703)
[»] scaffold0077 (1 HSPs)
scaffold0077 (483-609)||(7456-7586)
[»] scaffold0050 (1 HSPs)
scaffold0050 (484-609)||(42949-43073)
[»] scaffold0330 (1 HSPs)
scaffold0330 (779-821)||(4362-4404)
[»] scaffold0236 (1 HSPs)
scaffold0236 (543-619)||(19784-19860)


Alignment Details
Target: chr4 (Bit Score: 172; Significance: 5e-92; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 643 - 822
Target Start/End: Original strand, 843014 - 843193
Alignment:
Q  643 tgtgctatggttttttagtaaattgaatttcaatgttgttgattagatgcaaaccttatgtttgagtgaggtggaaatgttatgtggcaccaacagctct 742  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  843014 tgtgctatggttttttagtaaattgaatttcaatgttgttgattagatgcaaaccttatgtttgagtgaggtggaaatgttatgtggcaccaacagctct 843113  T
Q  743 gatcaaaggtgtttccagtgtccgacacgacactctcacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  843114 gatcaaaggtgtttccggtgtccgacacgacactctcacatgtgattacgttcaaataattcattttctcaaattattac 843193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 268 - 492
Target Start/End: Complemental strand, 842417 - 842193
Alignment:
Q  268 ccaccttaattttgtagaaggtataaagtttaacttttatgaaattacagtggattagccgtgatattgacataccatcatgatactaaatatagacnnn 367  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||       
T  842417 ccaccttaattttgtagaaggtataaagtttaacttttaggaaattacagttgattggccgtgatattgacataccatcatgatactaaatataaacttt 842318  T
Q  368 nnnnggtagcatgaataacggtgaattcaatttcagtcataaaatgcatctctattaaatttagggtgtttgatttataacttcagggacatgacaaatt 467  Q
        |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  842317 ttttggtagcatgaataacggtgaattcaaattcaatcataaaatgcatctctgttaaatttagggtgtttgatttataacttcagggacatgacaaact 842218  T
Q  468 agatgcaatggattggacaaaaact 492  Q
    |||||||||||||||| ||||||||    
T  842217 agatgcaatggattgggcaaaaact 842193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 842702 - 842576
Alignment:
Q  1 tatttctccgaaagttaccacactaaaattatgcactttatagccccaaatgtactaatttacaactcagcaaaactctatttatgggtttatggctaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  842702 tatttctccgaaagttaccacactaaaattatgcactttatagccccaaatgtactaatttacaactcagcaaaactctatttatgggtttatggctaag 842603  T
Q  101 tgtttgacatgcaagcagaaaatcaca 127  Q
    |||||||||||||||||||||||||||    
T  842602 tgtttgacatgcaagcagaaaatcaca 842576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 482 - 636
Target Start/End: Complemental strand, 3649738 - 3649584
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||| |||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||| ||||||||||  ||| |||| ||||    
T  3649738 ggacaaaaactaaaatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtcccccaa 3649639  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    ||| | ||||| |||| ||||||||||| | |||||||| |||||||||| ||||    
T  3649638 aaaacatataaaacaagaaattattcaataccataaaaatttgtgatgtgctgtt 3649584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 33552793 - 33552953
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| ||||||| |||   ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  33552793 ttcaggtacaggacaaattggatgcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 33552892  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  33552893 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 33552953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 23522015 - 23521855
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||| |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  23522015 ttcaggtacaggacaaactggaagcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 23521916  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  23521915 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 23521855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 637
Target Start/End: Original strand, 44324293 - 44324481
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| ||||  ||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  44324293 ttcaggtacaggacaaactagaggcaaaagacgggacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 44324392  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    | | |||||||||||||   ||| |||| ||||||||||||||| ||||||||||||||||   |||||||| |||| ||||| |||||    
T  44324393 ttttaaataccaaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttc 44324481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 50727864 - 50728024
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| |  | |||| |||  |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| |||    
T  50727864 ttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttg 50727963  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||||||||    
T  50727964 tctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 50728024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 50735878 - 50736038
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| |  | |||| |||  |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| |||    
T  50735878 ttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttg 50735977  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||||||||    
T  50735978 tctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 50736038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 449 - 620
Target Start/End: Complemental strand, 21580161 - 21579990
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| |||||||||    
T  21580161 ttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaaattg 21580062  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||||||   | ||||||  |||||||||||||| || |||||||| |||| | ||||||||    
T  21580061 tctaaaataccaaaatagcatgttgtccctcaaaaatcgtataaaactaaaaattactcaataccataaaaa 21579990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 43641201 - 43641074
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  43641201 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 43641102  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  43641101 aaatcgtataaaacaaaaaattactcaa 43641074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 495 - 636
Target Start/End: Original strand, 22318381 - 22318522
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    |||||||||||||||| ||| |||  ||||||||||||||  || || || |||||||||| ||||||||||  |||||||  ||||||||| ||||| |    
T  22318381 aatttttgtccctcaccaaaccacaacacaactttttgtcttacgtagaagttgtctaaaacaccaaaataacattttgtcatccaaaaatcatataaaa 22318480  T
Q  595 caaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    ||| ||||||||||| |||||||||| |||| ||||||||||    
T  22318481 caagaaattattcaatatcataaaaatttgtcatgtgttgtt 22318522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 460 - 609
Target Start/End: Complemental strand, 32181387 - 32181238
Alignment:
Q  460 gacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc 559  Q
    |||||| ||||||||| |||  |||||||||||   ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| ||||||||||||||    
T  32181387 gacaaactagatgcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaatacc 32181288  T
Q  560 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||   ||| |||| |||||||| |||||| ||| ||||||||||||    
T  32181287 aaaatagcatttcgtcccccaaaaatagtataaaacataaaattattcaa 32181238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 9807290 - 9807131
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||||||||||||  |||||||||||  | ||||||||| |||| ||| ||| | |||||||||||||  || ||||| |||    
T  9807290 ttcaggtacaagacaaactagatgcaatggacaggacaaaaactcaactttttgtcc-tcaccaaaccacagtacaactttttgtcctacgtacaagttg 9807192  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||| |||| ||||||||||||||| ||| ||||||||||||    
T  9807191 tctaaaataccaaaatagcatttcgtcctccaaaaatcgtataaaacataaaattattcaa 9807131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 33176983 - 33177143
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| |||  |||| |||    
T  33176983 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgcacaagttg 33177082  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| ||| ||||||| ||||    
T  33177083 tctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaa 33177143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 496 - 620
Target Start/End: Original strand, 47642489 - 47642613
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||||||||||||| ||    
T  47642489 atttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaac 47642588  T
Q  596 aaaaaattattcaacatcataaaaa 620  Q
    ||||||||||||||  |||||||||    
T  47642589 aaaaaattattcaatgtcataaaaa 47642613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 55594020 - 55593860
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||| ||| | || |||| |||  |||||||||||   ||||| ||||||||| ||| ||| |||||||||||| || ||| ||||| |||    
T  55594020 ttcaggtacatgataaactggaggcaagggacaggacaaaaactcatattttagtccctcaccaaaccacagcacaactttttatcccacgtacaagttg 55593921  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||| ||||    
T  55593920 tctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 55593860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 481 - 604
Target Start/End: Complemental strand, 1231414 - 1231291
Alignment:
Q  481 tggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccacca 580  Q
    ||||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||| ||||||||  ||||||||  ||    
T  1231414 tggacaaaaactcatatttttgtccctcacaaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctca 1231315  T
Q  581 aaaatcgtataagacaaaaaatta 604  Q
    |||||||||||| |||||| ||||    
T  1231314 aaaatcgtataaaacaaaatatta 1231291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 24002474 - 24002313
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  24002474 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 24002375  T
Q  549 tctaaaataccaaaata--atcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||  || ||||||||  |||||||||||||| ||||||||||| ||||    
T  24002374 tctaaaataccaaaatagcat-ttttgtccctcaaaaatcgtataaaacaaaaaattactcaa 24002313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 604
Target Start/End: Complemental strand, 36886067 - 36885912
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| |||||||||||| || ||| |||||||||    
T  36886067 ttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaaattg 36885968  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 604  Q
    ||||||||||| |||||   ||||||||  |||||||||||||| |||||||||||    
T  36885967 tctaaaatacctaaatagcattttgtccctcaaaaatcgtataaaacaaaaaatta 36885912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 483 - 637
Target Start/End: Complemental strand, 37865854 - 37865699
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| |||||||  |||||||||||||| ||  ||||| ||||||||||||||||||||   ||||||||  || |    
T  37865854 gacaaaaactcatatttttgtccctcaccaaatcacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtccctcaga 37865755  T
Q  583 aatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    |||||||||| ||||||||||||||||   ||| ||||| |||| |||||||||||    
T  37865754 aatcgtataaaacaaaaaattattcaatgccataaaaaaattgtcatgtgttgttc 37865699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 620
Target Start/End: Original strand, 2725117 - 2725254
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  2725117 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc-cacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 2725215  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||||||||| ||||||||||| ||||  |||||||||    
T  2725216 aaatcgtataaaacaaaaaattactcaatgtcataaaaa 2725254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 496 - 626
Target Start/End: Complemental strand, 41711935 - 41711805
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||  ||||||||||||||||||||   ||| |||| ||||| ||||||||| ||    
T  41711935 atttttgtccctcaccaaaccacagtacaactttttgtctcacgtacaggttgtctaaaataccaaaatagcatttcgtcccccaaatatcgtataaaac 41711836  T
Q  596 aaaaaattattcaacatcataaaaacttgtg 626  Q
    |||||||||||||| | |||||||| |||||    
T  41711835 aaaaaattattcaatagcataaaaatttgtg 41711805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 29785535 - 29785648
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||| ||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  29785535 atttttgtccctcaccaaaccacaacacagctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 29785634  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||||||||    
T  29785635 aaaaaattattcaa 29785648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 524 - 637
Target Start/End: Complemental strand, 41720903 - 41720790
Alignment:
Q  524 aactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaactt 623  Q
    ||||||||||| ||| |||||||| |||||||||| |||||||| |||||||||| |||||| ||||||||| ||||||||| ||| ||||| |||  ||    
T  41720903 aactttttgtcccacgtacaaattatctaaaatacaaaaataattttttgtccacaaaaaatagtataagactaaaaattatacaatatcattaaagttt 41720804  T
Q  624 gtgatgtgttgttc 637  Q
    || |||||||||||    
T  41720803 gtcatgtgttgttc 41720790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 56154709 - 56154596
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||| ||||| ||    
T  56154709 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaac 56154610  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  56154609 aaaaaattactcaa 56154596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 637
Target Start/End: Complemental strand, 24210454 - 24210264
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||| ||||||||||| ||| ||| |||||||||||| || ||| ||||| |||    
T  24210454 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattattgtccctcaccaaaccacagcacaactttttatcccacgtacaagttg 24210355  T
Q  549 tctaaaataccaaaata--atcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa-acttgtgatgtgttgttc 637  Q
    |||||||||||||||||  || ||||||||  |||||||||||||| ||||||||||| |||| | ||||||| | |||| |||||||||||    
T  24210354 tctaaaataccaaaatagcat-ttttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaaatatttgtcatgtgttgttc 24210264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 49152051 - 49152210
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | ||||||| |||   ||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| |||    
T  49152051 ttcaggtacaagacaaactggatgcaagggacacgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttg 49152150  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||| ||||||||||  ||||||||| |||||||||||||| ||||||||||| ||||    
T  49152151 tctaaaa-accaaaataacattttgtccatcaaaaatcgtataaaacaaaaaattactcaa 49152210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 482 - 625
Target Start/End: Original strand, 50178476 - 50178620
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgtccacca 580  Q
    |||||||||||   |||||||| |||||  ||| ||| |||||||||||| ||| ||| ||||| |||||||||||| |||||||   |||||||| |||    
T  50178476 ggacaaaaactgatatttttgtgcctcagcaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccccca 50178575  T
Q  581 aaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    |||||||||||| ||||||||||||||||  ||||||||| ||||    
T  50178576 aaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 50178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 9512324 - 9512451
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||||||| |||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  9512324 ggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 9512423  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||| ||||| ||||||||||| ||||    
T  9512424 aaatcatataaaacaaaaaattactcaa 9512451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 20802515 - 20802642
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  20802515 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 20802614  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||| ||||| ||||||||||| ||||    
T  20802615 aaatcatataaaacaaaaaattactcaa 20802642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 449 - 604
Target Start/End: Complemental strand, 38812655 - 38812500
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  38812655 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 38812556  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 604  Q
    |||||||||||||||||   |||||| |  |||||||||||||| |||||||||||    
T  38812555 tctaaaataccaaaatagcattttgttccgcaaaaatcgtataaaacaaaaaatta 38812500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 625
Target Start/End: Complemental strand, 52949822 - 52949680
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||    
T  52949822 ggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaa 52949723  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||||| || |||||||||||||  ||||||||| ||||    
T  52949722 aaatcgtataaaac-aaaaattattcaatgtcataaaaatttgt 52949680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 55065317 - 55065444
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   ||||||||  |||    
T  55065317 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccttcaa 55065416  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  55065417 aaatcgtataaaacaaaaaattactcaa 55065444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 520 - 637
Target Start/End: Complemental strand, 29616234 - 29616116
Alignment:
Q  520 gcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaa 618  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||  ||||||||   ||||||||||||| ||||||||||| ||||   ||| |||    
T  29616234 gcacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtcccttaaaaatcgtataaaacaaaaaattactcaatgccataaaa 29616135  T
Q  619 aacttgtgatgtgttgttc 637  Q
    || |||| |||||||||||    
T  29616134 aatttgtcatgtgttgttc 29616116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 37695526 - 37695652
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||  |||||||||||| ||||||||  ||| |||| |||||    
T  37695526 gacaaaaactgatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaggttgtctaaaatatcaaaataacatttcgtcccccaaa 37695625  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||||||||    
T  37695626 aatcgtataaaacaaaaaattattcaa 37695652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 637
Target Start/End: Complemental strand, 43739562 - 43739408
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  |||| ||||||||||| ||| |||  |||||| ||||||| ||||||||| ||||||||||||  |||||||  |||| ||||| |||    
T  43739562 gacaaaaactgaaattattgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtctaaaatattaaaataacattttatccacaaaa 43739463  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||| ||||||||| |||||||||| || | || ||||| || | |||||||||||    
T  43739462 aattgtataagaccaaaaattatttaataccaaaaaaatttatcatgtgttgttc 43739408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 636
Target Start/End: Original strand, 53200628 - 53200782
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    ||||||||||  |||||||||||||||| ||| ||| |||||||||||| ||| ||| ||||| |||||||||| | ||||||| | ||| ||||  |||    
T  53200628 gacaaaaactgaaatttttgtccctcaccaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaacatcaaaatagtatttcgtccctcaa 53200727  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    ||||| || || |||||||||||||||| | |||||||| ||||  |||||||||    
T  53200728 aaatcatacaaaacaaaaaattattcaataccataaaaatttgttctgtgttgtt 53200782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 620
Target Start/End: Original strand, 38486242 - 38486379
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| ||| |||||||||||||||  || ||||| |||||||||||| |||||||   ||||||||  ||||    
T  38486242 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctaacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaa 38486341  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||| |||||| ||||||||||| |||||  ||||||||    
T  38486342 aatagtataaaacaaaaaattactcaacgccataaaaa 38486379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 460 - 609
Target Start/End: Complemental strand, 54543113 - 54542965
Alignment:
Q  460 gacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc 559  Q
    |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| ||  ||||||||||| ||| ||| ||||| ||||||||||||||    
T  54543113 gacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccatagcacaactttt-gtcccacgtacaagttgtctaaaatacc 54543015  T
Q  560 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  54543014 aaaatatcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 54542965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 469 - 609
Target Start/End: Complemental strand, 2787079 - 2786939
Alignment:
Q  469 gatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatc 568  Q
    ||||||| |||  |||||||||||   |||||||||| |||||||| |||  ||||| |||||||| ||| |||||||| |||||||  |||||||||      
T  2787079 gatgcaagggacaggacaaaaactcatatttttgtccttcactaaaccacatcacaaatttttgtcccacgtacaaattatctaaaaatccaaaataaca 2786980  T
Q  569 ttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||| |||| ||||||||| ||||| ||||||||||||||||    
T  2786979 tttcgtcccccaaaaatcttataaaacaaaaaattattcaa 2786939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 482 - 637
Target Start/End: Original strand, 44649148 - 44649301
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||  ||||| |||||||||||| |||||||   |||||||| ||||    
T  44649148 ggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtcccccaa 44649247  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||| ||  ||||||||||||  |||| |||| |||| |||||||||||    
T  44649248 aaatcgtataaaac--aaaattattcaatgtcatcaaaatttgtcatgtgttgttc 44649301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 46680461 - 46680621
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||||||||| || ||| ||| ||||||||||||||| ||| |||||||||    
T  46680461 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacagcacaactttttgtctcacgtacaaattg 46680560  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||| ||||   ||||||||   ||||||| ||||| ||||||||||| ||||    
T  46680561 tctaaaataccataatagcattttgtccctaaaaaatcatataaaacaaaaaattactcaa 46680621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 604
Target Start/End: Complemental strand, 4325926 - 4325771
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| | || |||| |||  ||| |||||||   ||||||||| ||||| ||| | |  |||||||||||||| ||| ||||| |||    
T  4325926 ttcaggtacatgacaaactggaggcaagggacaggagaaaaactcatatttttgtctctcacaaaaccgcaacacaactttttgtcccacgtacaagttg 4325827  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 604  Q
    |||||||||||||||||   |||||||| |||||||||| |||| |||||||||||    
T  4325826 tctaaaataccaaaatagcattttgtcccccaaaaatcgcataaaacaaaaaatta 4325771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 593 - 643
Target Start/End: Complemental strand, 842192 - 842142
Alignment:
Q  593 gacaaaaaattattcaacatcataaaaacttgtgatgtgttgttccgctct 643  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  842192 gacaaaaaattattcaacatcataaaaacttgtgatgtgttgttccgctct 842142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 482 - 604
Target Start/End: Complemental strand, 21202841 - 21202720
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   | ||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||    
T  21202841 ggacaaaaactcataattttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcc-ccaa 21202743  T
Q  582 aaatcgtataagacaaaaaatta 604  Q
    ||||||||||| |||||||||||    
T  21202742 aaatcgtataaaacaaaaaatta 21202720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 482 - 600
Target Start/End: Complemental strand, 34930017 - 34929899
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||||| |||||| ||| ||| ||||||||||||| | || |||||| |||||||||||| |||||||   |||||||| ||||    
T  34930017 ggacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgccccatatacaagttgtctaaaatatcaaaatagcattttgtcccccaa 34929918  T
Q  582 aaatcgtataagacaaaaa 600  Q
    ||||||||||| |||||||    
T  34929917 aaatcgtataaaacaaaaa 34929899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 496 - 598
Target Start/End: Complemental strand, 52319411 - 52319309
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||  ||||||||  ||||||||  |||||||||||||| ||    
T  52319411 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatgtcaaaataacattttgtccctcaaaaatcgtataaaac 52319312  T
Q  596 aaa 598  Q
    |||    
T  52319311 aaa 52319309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 484 - 609
Target Start/End: Complemental strand, 7001952 - 7001829
Alignment:
Q  484 acaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaa 583  Q
    |||||||| | |||||||||||||||| ||| |||  |||||||||||||   |  || || ||||||||| ||||||||||| | ||||||||||||||    
T  7001952 acaaaaacaaaaatttttgtccctcaccaaaccacaacacaactttttgttctatgtataagttgtctaaa-taccaaaataa-catttgtccaccaaaa 7001855  T
Q  584 atcgtataagacaaaaaattattcaa 609  Q
    |||||||||||| |||||||||||||    
T  7001854 atcgtataagaccaaaaattattcaa 7001829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 20518020 - 20518133
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||||||| ||| ||||| ||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||  ||||| ||    
T  20518020 atttttgtccctcaccaaatcacagcataacttcttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattctataaaac 20518119  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  20518120 aaaaaattactcaa 20518133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 36743686 - 36743799
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| |||  || ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||||| |||||| ||    
T  36743686 atttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattgtataaaac 36743785  T
Q  596 aaaaaattattcaa 609  Q
    || |||||| ||||    
T  36743786 aacaaattactcaa 36743799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 496 - 625
Target Start/End: Complemental strand, 50186616 - 50186487
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||||||||| || ||||||||| ||||||||||||| ||||||   ||| |  | ||||||||||||||| |     
T  50186616 atttttgtccctcaccaaaccacaacacaactttttatcccacatacaagttgtctaaaatacaaaaatagcatttcgcaccccaaaaatcgtataaaat 50186517  T
Q  596 aaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||||||||  ||||||||| ||||    
T  50186516 aaaaaattattcaatgtcataaaaatttgt 50186487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 29593030 - 29592870
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | ||||||| |||   ||||||||||   |||||||| | |||||||| ||| ||||||||||||||| |||||| || |||    
T  29593030 ttcaggtacaggacaaactggatgcaagggacatgacaaaaactcatatttttgtacttcactaaaccacagcacaactttttgtcccacataaaagttg 29592931  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||  |||||||    ||| |||| ||||||||| ||||| ||||||||||||||||    
T  29592930 tctaaaaatccaaaatggcatttcgtcccccaaaaatcatataaaacaaaaaattattcaa 29592870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 486 - 609
Target Start/End: Original strand, 7554945 - 7555068
Alignment:
Q  486 aaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 585  Q
    ||||||| | |||||||||| |||||||| ||   |||||||||||||| ||| ||||| ||||||||||  ||||||||   ||| | || ||||||||    
T  7554945 aaaaactcgtatttttgtccttcactaaaccataacacaactttttgtctcacgtacaagttgtctaaaaatccaaaatagcatttcggcctccaaaaat 7555044  T
Q  586 cgtataagacaaaaaattattcaa 609  Q
    ||||||| ||||||||||||||||    
T  7555045 cgtataaaacaaaaaattattcaa 7555068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 483 - 625
Target Start/End: Complemental strand, 26083440 - 26083297
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaata-ccaaaataatcttttgtccaccaa 581  Q
    ||||||||||  |||||||||||||||| ||| ||| ||| ||||||||||| ||| ||||| |||||||||| | |||||||||  ||| |||| ||||    
T  26083440 gacaaaaactgaaatttttgtccctcaccaaaccacagcataactttttgtcccacttacaagttgtctaaaacacccaaaataacatttcgtcccccaa 26083341  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||| | ||||| |||  ||||||||||| | |||||||| ||||    
T  26083340 aaagcatataaaacatgaaattattcaataccataaaaatttgt 26083297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 36497319 - 36497192
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||||||||||  |||||||| |||||||||||| |||||||   || |||||  |||    
T  36497319 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtccaacatacaagttgtctaaaatatcaaaatagcattctgtccctcaa 36497220  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| | ||||||||| ||||    
T  36497219 aaatcgtataaaataaaaaattactcaa 36497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 449 - 620
Target Start/End: Complemental strand, 39078796 - 39078625
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||  ||||| | || ||||  ||| |||||||| ||  |||||||||||||||| ||| |||  ||||| ||||||||  || ||| | |||    
T  39078796 ttcagggacagaacaaactggaggcaagagataggacaaaacctgaaatttttgtccctcaccaaaccacaacacaaatttttgtcctacgtacgagttg 39078697  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||||| ||||||||||  |||||||| ||||||||| ||||| | || ||||||||||| | ||||||||    
T  39078696 tctaaaacaccaaaataacattttgtcccccaaaaatcatataaaataagaaattattcaataccataaaaa 39078625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 14296654 - 14296572
Alignment:
Q  527 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||| ||| ||||| |||||||||||||||||||||  |||||||  ||||||||||||||| ||||||||||| ||||    
T  14296654 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtctcccaaaaatcgtataaaacaaaaaattactcaa 14296572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 14314902 - 14314820
Alignment:
Q  527 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||| ||| ||||| |||||||||||||||||||||  |||||||  ||||||||||||||| ||||||||||| ||||    
T  14314902 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtctcccaaaaatcgtataaaacaaaaaattactcaa 14314820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 604
Target Start/End: Complemental strand, 20694473 - 20694351
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  | ||||||||||||  || ||||| ||||||||||||||||||||   |||||||| ||||    
T  20694473 ggacaaaaactcatatttttgtccctcaccaaaccacaacgcaactttttgtccaacgtacaagttgtctaaaataccaaaatagcattttgtcccccaa 20694374  T
Q  582 aaatcgtataagacaaaaaatta 604  Q
    ||||  ||||| |||||||||||    
T  20694373 aaattatataaaacaaaaaatta 20694351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 10452952 - 10452891
Alignment:
Q  61 tacaactcagcaaaactctatttatgggtttatggctaagtgtttgacatgcaagcagaaaa 122  Q
    |||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||    
T  10452952 tacaactcagcaaaactcaatttaaggatttatgactaagtgtttgacatgcaagcagaaaa 10452891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 565
Target Start/End: Complemental strand, 28115340 - 28115271
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 565  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||    
T  28115340 atttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaata 28115271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 483 - 619
Target Start/End: Complemental strand, 9948030 - 9947894
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||| |||| || |||||||||||| |||   ||||||||||||| ||| ||||| || |  |||||||||||||| || ||||||||| |||    
T  9948030 gacaaaaactaaaattcttatccctcactaaaccacattacaactttttgtctcacgtacaagttattcaaaataccaaaatagtcctttgtccacaaaa 9947931  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    || | ||||| || |||| ||||| || |||||||||    
T  9947930 aaccatataaaaccaaaatttatttaatatcataaaa 9947894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 482 - 604
Target Start/End: Complemental strand, 23328021 - 23327897
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgt-ccacc 579  Q
    |||||||||||   ||||||||||||||  ||| |||  ||||||||||| ||| ||| ||||| |||||||||||||||||||||  |||| | || ||    
T  23328021 ggacaaaaactcatatttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtctaaaataccaaaataacattttatcccccc 23327922  T
Q  580 aaaaatcgtataagacaaaaaatta 604  Q
    ||||||||||||| |||||||||||    
T  23327921 aaaaatcgtataaaacaaaaaatta 23327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 495 - 637
Target Start/End: Original strand, 45577689 - 45577829
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    |||| |||| |||| ||||| |||  |||||||||||||| ||| | ||| ||||||||||||||||||| |  |||||||||| |||||| |  |||||    
T  45577689 aattcttgttcctcgctaaaccacaacacaactttttgtcccacgtgcaagttgtctaaaataccaaaatgacattttgtccacaaaaaattgattaaga 45577788  T
Q  595 caaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |  |||||||||||| | |||||||  |||| |||||||||||    
T  45577789 c--aaaattattcaataccataaaactttgtcatgtgttgttc 45577829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 11056143 - 11056017
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||||||| || ||| |||  ||||||||| |||| ||  |||| |||||| |||||||||||||||  ||| || |  ||||    
T  11056143 gacaaaaactgatatttttgtcccttaccaaaccacaacacaactttatgtcccatgtacagattgtcaaaaataccaaaataacatttcgtgcctcaaa 11056044  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||||||||    
T  11056043 aatcgtataaaacaaaaaattattcaa 11056017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 483 - 601
Target Start/End: Complemental strand, 12600987 - 12600869
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||   |||    
T  12600987 gacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaa 12600888  T
Q  583 aatcgtataagacaaaaaa 601  Q
    |||||| ||| ||||||||    
T  12600887 aatcgtttaaaacaaaaaa 12600869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 482 - 619
Target Start/End: Original strand, 44355838 - 44355976
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgtccacca 580  Q
    ||||||||| |  ||||||||||||||| |||| |||  ||||| ||||| |||  || ||||| |||| | | ||||||||||| ||||||||||| ||    
T  44355838 ggacaaaaattgaaatttttgtccctcattaaaccacaacacaatttttttgtcttacgtacaagttgtatgatataccaaaatagtcttttgtccatca 44355937  T
Q  581 aaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    ||||||||| ||||| |||| |||||||| | |||||||    
T  44355938 aaaatcgtacaagaccaaaagttattcaatagcataaaa 44355976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 496 - 620
Target Start/End: Original strand, 47361411 - 47361531
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||||||||||||   || |||| ||||||||||||||||||||   ||||||||   |||| |||||||| ||    
T  47361411 atttttgtccctcaccaaaccacaacacaactttttgtc---ca-acaagttgtctaaaataccaaaatagcattttgtccctaaaaattcgtataaaac 47361506  T
Q  596 aaaaaattattcaacatcataaaaa 620  Q
    ||||||||| |||| ||||||||||    
T  47361507 aaaaaattactcaatatcataaaaa 47361531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 483 - 565
Target Start/End: Original strand, 50729527 - 50729609
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 565  Q
    ||||||||||  ||||||||||  |||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  50729527 gacaaaaactgaaatttttgtctatcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaata 50729609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 609
Target Start/End: Complemental strand, 985326 - 985257
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||| |||| ||||||| ||||||| ||||||||||| |||||||| |||||||| |||||||||||||    
T  985326 tacaagttgtttaaaatatcaaaatagtcttttgtccagcaaaaatcatataagaccaaaaattattcaa 985257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 37932008 - 37931895
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||||||||||||  |||||||| |||| ||||||  |||||||   ||| |||| |||||||| |||||| ||    
T  37932008 atttttgtccctcaccaaaccacaacacaactttttgtcctacatacaagttgtttaaaatgtcaaaatagcatttcgtcccccaaaaattgtataaaac 37931909  T
Q  596 aaaaaattattcaa 609  Q
     |||||||||||||    
T  37931908 gaaaaattattcaa 37931895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 461 - 609
Target Start/End: Complemental strand, 6776701 - 6776553
Alignment:
Q  461 acaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacca 560  Q
    ||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| || || |||||||||| | ||    
T  6776701 acaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacatca 6776602  T
Q  561 aaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||   |||||||    ||||||||||||| ||||||||||| ||||    
T  6776601 aaatatcattttgtctctaaaaaatcgtataaaacaaaaaattactcaa 6776553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 633
Target Start/End: Original strand, 31445899 - 31446010
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||| ||||| |||||||| |||||||||| |||||||  |||||| ||| |||||||||| ||||  ||||||||| ||| | |||||||     
T  31445899 cacaactttttgccacacgtacaaattatctaaaatacaaaaataactttttgttcacaaaaaatcgtacaaga-taaaaattatccaataccataaaag 31445997  T
Q  621 cttgtgatgtgtt 633  Q
     |||| |||||||    
T  31445998 tttgtcatgtgtt 31446010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 602
Target Start/End: Original strand, 56487281 - 56487356
Alignment:
Q  527 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 602  Q
    |||||||||| | ||||| |||| ||||||||||||||||  |||||||| ||||||||| ||||| |||||||||    
T  56487281 tttttgtcacgcgtacaagttgtttaaaataccaaaataacattttgtcctccaaaaatcatataaaacaaaaaat 56487356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 483 - 585
Target Start/End: Original strand, 37859244 - 37859346
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||| || |||| || |||| |||| ||   |||||||||||||| || |||||| |||||||||| || |||||||| |||||||||| |||    
T  37859244 gacaaaaactaaaaattttatctctcaataaaccataacacaactttttgtctcaaatacaacttgtctaaaacactaaaataattttttgtccacaaaa 37859343  T
Q  583 aat 585  Q
    |||    
T  37859344 aat 37859346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 619
Target Start/End: Original strand, 43189762 - 43189883
Alignment:
Q  497 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagaca 596  Q
    |||||||  ||||||||| |||  ||||| |||||||| || || ||| || |||||| ||| |||||||  | |||||||| ||| |||||||||||||    
T  43189762 tttttgtgtctcactaaaccacgacacaagtttttgtcccaaatgcaagttatctaaa-tacaaaaataacttattgtccactaaatatcgtataagaca 43189860  T
Q  597 aaaaattattcaacatcataaaa 619  Q
    ||||||||||||| | |||||||    
T  43189861 aaaaattattcaataccataaaa 43189883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 2629902 - 2630019
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||   ||||||||||   ||||||||||||||| | | ||   |||||||||||||| ||| ||||| |||    
T  2629902 ttcaggtacaggacaaactagaggcaaaggacatgacaaaaactcatatttttgtccctcaccagaccaaatcacaactttttgtctcacgtacaagttg 2630001  T
Q  549 tctaaaataccaaaataa 566  Q
    ||||||||||||||||||    
T  2630002 tctaaaataccaaaataa 2630019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 609
Target Start/End: Complemental strand, 7381340 - 7381255
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| |||| | |||||||| |||||||||| |||||| | ||||||||||| |||||| ||||||  ||||||||||||||    
T  7381340 cacaactttttttcacgcgtacaaattatctaaaatacaaaaatagttttttgtccacc-aaaatcatataag--aaaaaattattcaa 7381255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 454 - 551
Target Start/End: Original strand, 25978567 - 25978664
Alignment:
Q  454 ggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtct 551  Q
    |||||||||||||| || |||||| |  |||||||||||  |||||||||||||||| ||| ||   |||||||||||||| ||| ||||| ||||||    
T  25978567 ggacatgacaaattggaggcaatgaacaggacaaaaactgaaatttttgtccctcaccaaaccatatcacaactttttgtctcacttacaagttgtct 25978664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 41262055 - 41261974
Alignment:
Q  528 ttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||| ||| ||||| |||||||||||| |||| || |||||||||||| | ||| |||||||||| |||| ||||||||    
T  41262055 ttttgtctcacctacaagttgtctaaaatagcaaattagtcttttgtccacaagaaaacgtataagaccaaaacttattcaa 41261974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 524 - 609
Target Start/End: Complemental strand, 42772818 - 42772733
Alignment:
Q  524 aactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||| || || || ||||||||||||||||||  |||| ||| ||||||||| ||||| ||||||||||| ||||    
T  42772818 aactttttgtcccacgtataagttatctaaaataccaaaataacattttttcctccaaaaatcatataaaacaaaaaattactcaa 42772733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 42870073 - 42869948
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata--atcttttgtccacc 579  Q
    |||||||||||   ||||||||||||||| ||| ||| |||||||||   ||| ||| || || ||||||||||||| ||||||  || ||||||||  |    
T  42870073 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt---gtcccacgtataagttgtctaaaatacaaaaatagcat-ttttgtccctc 42869978  T
Q  580 aaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||| ||||||||||| ||||    
T  42869977 aaaaatcgtataaaacaaaaaattactcaa 42869948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 527 - 582
Target Start/End: Complemental strand, 2858455 - 2858400
Alignment:
Q  527 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  2858455 tttttgtctcacatacaaattgtctagaataccaaaataattttttggccatcaaa 2858400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 779 - 822
Target Start/End: Complemental strand, 16010759 - 16010716
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  16010759 cacatgtgattgcgttcaaatgatttattttctcaaattattac 16010716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 498 - 609
Target Start/End: Complemental strand, 32858408 - 32858298
Alignment:
Q  498 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 597  Q
    ||||||||||||||||| ||   || ||||||||||| || ||| ||||| ||||||||| |||||||||  ||| | ||  |||||| |||||| ||||    
T  32858408 ttttgtccctcactaaaccataacataactttttgtctcaaatataaattatctaaaatatcaaaataattctttat-cattaaaaattgtataaaacaa 32858310  T
Q  598 aaaattattcaa 609  Q
    ||||||||||||    
T  32858309 aaaattattcaa 32858298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 569 - 620
Target Start/End: Complemental strand, 44640353 - 44640302
Alignment:
Q  569 ttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||| || ||||||||| ||||||||||||| ||||||||||    
T  44640353 ttttgtccaccaaagattgtataagactaaaaattattcaatatcataaaaa 44640302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 618
Target Start/End: Complemental strand, 3579187 - 3579089
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccac-caaaaatcgtataagacaaaaaattattcaacatcataaa 618  Q
    ||||||||||||||  |||| ||| |||||||||||||||||||| |||||||| | |  ||||| | ||||| |  ||||||||||||| ||||||||    
T  3579187 cacaactttttgtccaacattcaagttgtctaaaataccaaaatagtcttttgttcgcaaaaaaaccttataaaaacaaaaattattcaatatcataaa 3579089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 496 - 637
Target Start/End: Complemental strand, 16320607 - 16320468
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||  ||| ||||||||| ||||||   |||  ||| |||||| |||||||| ||    
T  16320607 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaggttgcctaaaatacaaaaatagaatttcatcccccaaaactcgtataaaac 16320508  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
      ||||||||||||   |||||||| ||||  ||||||||||    
T  16320507 --aaaattattcaatgccataaaaatttgtcttgtgttgttc 16320468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 619
Target Start/End: Complemental strand, 21098636 - 21098498
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcca-cca 580  Q
    ||||||||| |  |||| ||||| ||||||||| |||  || ||||||||||| ||| || || ||||||||||||| |||||||  |||| ||||   |    
T  21098636 ggacaaaaattgaaattcttgtctctcactaaaccacaacataactttttgtcgcacgtaaaatttgtctaaaatactaaaataacattttctccataaa 21098537  T
Q  581 aaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||||||| |||| |||| ||||| || |||||||||    
T  21098536 aaaatcgtattagaccaaaagttatttaatatcataaaa 21098498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 499 - 601
Target Start/End: Complemental strand, 43893662 - 43893560
Alignment:
Q  499 tttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaa 598  Q
    ||||||| |||||||| |||  ||||| |||||||| ||| | ||  || |||||||||| |||||| | |||||||||||||||||  ||||| |||||    
T  43893662 tttgtccttcactaaaccacaacacaattttttgtctcacgtgcaggttatctaaaatacaaaaatagttttttgtccaccaaaaattatataaaacaaa 43893563  T
Q  599 aaa 601  Q
    |||    
T  43893562 aaa 43893560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 495 - 585
Target Start/End: Complemental strand, 52673900 - 52673810
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 585  Q
    |||||||||||||||||||| | |  ||||| |||||||| ||| ||  | || |||||||||| |||||||  |||||||||||||||||    
T  52673900 aatttttgtccctcactaaacctcaacacaattttttgtctcacgtatgagttatctaaaatacaaaaataaatttttgtccaccaaaaat 52673810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 609
Target Start/End: Complemental strand, 30942886 - 30942763
Alignment:
Q  486 aaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 585  Q
    |||||||  ||||| |||| ||||| ||| |||  |||||| ||||| | |||||| || |||||||||| |||||||||   |||  ||| ||||||||    
T  30942886 aaaaactgaaatttctgtctctcaccaaaccacaacacaacattttgcctcacatataagttgtctaaaacaccaaaatatcatttcatcccccaaaaat 30942787  T
Q  586 cgtataagacaaaaaattattcaa 609  Q
    | ||||| |||| |||||||||||    
T  30942786 catataaaacaagaaattattcaa 30942763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 39513497 - 39513431
Alignment:
Q  509 actaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtc 575  Q
    ||||||| || ||||||||||||||| || ||| | |||||| |||| ||||||||| |||||||||    
T  39513497 actaaataacagcacaactttttgtctcaaatatatattgtcgaaaacaccaaaatagtcttttgtc 39513431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 595
Target Start/End: Complemental strand, 40792480 - 40792406
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||||||  ||  ||||| || |||||||||| ||||||   ||||||||| |||||||||||||||||    
T  40792480 cacaactttttgtttcatgtacaagttatctaaaatacaaaaatagctttttgtccatcaaaaatcgtataagac 40792406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 779 - 813
Target Start/End: Complemental strand, 54779201 - 54779167
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctca 813  Q
    ||||||||||| |||||||||||||||||||||||    
T  54779201 cacatgtgattacgttcaaataattcattttctca 54779167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 566
Target Start/End: Original strand, 34559968 - 34560013
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataa 566  Q
    ||||||||||||||| ||||| || ||||||||| |||||||||||    
T  34559968 cacaactttttgtcatacatagaagttgtctaaagtaccaaaataa 34560013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 1e-52; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 25384061 - 25383936
Alignment:
Q  3 tttctccgaaagttaccacactaaaattatgcactttatagccccaaatgtactaatttacaactcagcaaaactctatttatgggttta-tggctaagt 101  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||    
T  25384061 tttctcagaaagttaccacactaaaattatgcactttatagccccaaatgtaccaatttacaactcagcaaaactcaatttatgggtttattggctaagt 25383962  T
Q  102 gtttgacatgcaagcagaaaatcaca 127  Q
    ||||||||||||||||||||||||||    
T  25383961 gtttgacatgcaagcagaaaatcaca 25383936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 643 - 822
Target Start/End: Original strand, 25384365 - 25384550
Alignment:
Q  643 tgtgctatggttttttagtaaattgaatttcaatgttgttgattagatgcaaaccttatgtttgagtgaggtggaaatgttatgtggcaccaacagctct 742  Q
    |||||||||| ||| ||||||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  25384365 tgtgctatggctttctagtaaattgaatttcaatgttgttaatttgatgcataccttatgattgagtgaggtggaaatgttatgtagcaccaacagctct 25384464  T
Q  743 gatcaaaggtgtttccagtgtccga------cacgacactctcacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
     ||||||||||||||| ||||| ||      |||||||||  ||||||||||| |||||  |||||||||||| | ||||||||||    
T  25384465 aatcaaaggtgtttccggtgtctgacactggcacgacactgacacatgtgattccgttcccataattcatttttttaaattattac 25384550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 449 - 620
Target Start/End: Original strand, 7761531 - 7761702
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  7761531 ttcaggtacatgacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttg 7761630  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||  |||||||||    
T  7761631 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaa 7761702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 460 - 609
Target Start/End: Complemental strand, 16104395 - 16104246
Alignment:
Q  460 gacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc 559  Q
    |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||||||||||||||||||    
T  16104395 gacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaatacc 16104296  T
Q  560 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  16104295 aaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 16104246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 449 - 637
Target Start/End: Original strand, 41366068 - 41366253
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||||||||| | || ||||  ||| |||||||||||  |||||||||||||||| ||| |||  ||||| |||||||| ||||||||| |||    
T  41366068 ttcagggacatgacaaactggaggcaagagataggacaaaaactgaaatttttgtccctcaccaaaccacaacacaattttttgtctcacatacaagttg 41366167  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||||||  || | ||||| ||||||  ||||||||  |||||||||||| |||||||||| || | |||||||||||    
T  41366168 tctaaaataccaaaataacattgtatccacaaaaaattatataagac--aaaattattcaatatcataaaaa-ttatcatgtgttgttc 41366253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 483 - 628
Target Start/End: Complemental strand, 25383235 - 25383084
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcac-------acatacaaattgtctaaaataccaaaataatcttttgtc 575  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||         || |||||  |||||||||||| || |||| ||||||||    
T  25383235 gacaaaaac-agaatttttgtccctcactaaatcactgcacaactttttgtctatttgtctacgtacaagatgtctaaaatacaaatataagcttttgtc 25383137  T
Q  576 caccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgat 628  Q
    ||| |||||||||||||||||| ||||||||||| | | ||||||||||||||    
T  25383136 cacaaaaaatcgtataagacaacaaattattcaataccgtaaaaacttgtgat 25383084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 37003873 - 37003986
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| |||||||||||||||||||||||||||  ||||||||  |||||||||||||| |     
T  37003873 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaat 37003972  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||||||||    
T  37003973 aaaaaattattcaa 37003986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 5278792 - 5278952
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| |||||| |||||||| ||| ||||| |||    
T  5278792 ttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaattttttgtcccacgtacaagttg 5278891  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  5278892 tctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaa 5278952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 33366742 - 33366582
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||||| |||||| ||| |||  ||||||||||| || ||||||||| |||    
T  33366742 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttctcccacatacaagttg 33366643  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||||||||    
T  33366642 tctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 33366582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 2645077 - 2645204
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||||||||| ||||||||||||||||||||   |||||| |  |||    
T  2645077 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgttcctcaa 2645176  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  2645177 aaatcgtataaaacaaaaaattactcaa 2645204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 482 - 620
Target Start/End: Original strand, 19513680 - 19513818
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  19513680 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 19513779  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||| ||||| ||||||||||| |||| | ||||||||    
T  19513780 aaatcatataaaacaaaaaattactcaataccataaaaa 19513818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 472 - 594
Target Start/End: Complemental strand, 26796337 - 26796216
Alignment:
Q  472 gcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttt 571  Q
    ||||||||| ||| ||||| || ||||| |||||||||||||| |||  | |||||||||||||||| ||||| |||||||||||||| ||||| |||||    
T  26796337 gcaatggataggataaaaattaaaatttgtgtccctcactaaagcacaacgcaactttttgtcacacgtacaagttgtctaaaatacc-aaatagtcttt 26796239  T
Q  572 tgtccaccaaaaatcgtataaga 594  Q
    ||||||||||||||| |||||||    
T  26796238 tgtccaccaaaaatcatataaga 26796216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 44284727 - 44284601
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   ||||||||  ||||    
T  44284727 gacaaaaactcatatttttgtccctcactaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataacaaaatagcattttgtccctcaaa 44284628  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  44284627 aatcgtataaaacaaaaaattactcaa 44284601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 449 - 637
Target Start/End: Original strand, 32766462 - 32766651
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaatt 547  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  ||||||||||| |||  || ||||  ||    
T  32766462 ttcaggtacatgacaaactggaggcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaacttttttgtcctacgtacaggtt 32766561  T
Q  548 gtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |||||||||||||||||||  ||| |||| ||||||||||||||| ||||||||||||||||   |||||||| ||||  ||||||||||    
T  32766562 gtctaaaataccaaaataacatttcgtcctccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcctgtgttgttc 32766651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 17540814 - 17540686
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc-aaaataatcttttgtccacca 580  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||| |||||| | ||||||||  ||    
T  17540814 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaaatagtattttgtccctca 17540715  T
Q  581 aaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||| ||||||||||| ||||    
T  17540714 aaaatcgtataaaacaaaaaattactcaa 17540686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 32498047 - 32497887
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| |  | |||| |||  |||||||||||   |||||||| |||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  32498047 ttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtacctcaccaaaccacatcacaactttttgtcccacgtacaagttg 32497948  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||| ||||    
T  32497947 tctaaaataccaaaataacattttgtccttcaaaaatcgtataaaacaaaaaattactcaa 32497887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 601
Target Start/End: Complemental strand, 42706491 - 42706339
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| ||||  ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||||||||| |||    
T  42706491 ttcaggtacaggacaaactggaggcaagggataagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttg 42706392  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 601  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||    
T  42706391 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaa 42706339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 497 - 604
Target Start/End: Complemental strand, 9717308 - 9717201
Alignment:
Q  497 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagaca 596  Q
    |||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||| | ||||||||  |||||||||||| | |||    
T  9717308 tttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtatcaaaca 9717209  T
Q  597 aaaaatta 604  Q
    ||||||||    
T  9717208 aaaaatta 9717201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 604
Target Start/End: Complemental strand, 35114917 - 35114762
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  ||||| |||||||| ||| ||||| |||    
T  35114917 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttg 35114818  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 604  Q
    |||||||||||||||||   ||||||||  |||||||||||||| |||||||||||    
T  35114817 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaatta 35114762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 9732922 - 9733048
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   ||||||||  ||||    
T  9732922 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaa 9733021  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||||||||    
T  9733022 aatcgtataaaacaaaaaattattcaa 9733048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 620
Target Start/End: Complemental strand, 33889342 - 33889204
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||| |||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||    
T  33889342 ggacaaaaactcatatttttttccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaa 33889243  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||| ||||| ||||||||||| |||| | ||||||||    
T  33889242 aaatcatataaaacaaaaaattactcaataccataaaaa 33889204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 7259029 - 7258868
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  7259029 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttg 7258930  T
Q  549 tctaaaataccaaaataa-tcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||   ||||||||  ||||||| |||||| ||||||||||| ||||    
T  7258929 tctaaaataccaaaataacatttttgtccctcaaaaattgtataaaacaaaaaattactcaa 7258868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 483 - 604
Target Start/End: Complemental strand, 26419021 - 26418900
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||| |||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  |||| ||| |||||    
T  26419021 gacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttatcccccaaa 26418922  T
Q  583 aatcgtataagacaaaaaatta 604  Q
    ||| |||||| |||||||||||    
T  26418921 aattgtataaaacaaaaaatta 26418900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 34338942 - 34338782
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||| ||||||| ||| ||| ||||||||||||||| |||  |||| |||    
T  34338942 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgaccctcaccaaaccacagcacaactttttgtcccacgcacaagttg 34338843  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  34338842 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 34338782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 496 - 637
Target Start/End: Original strand, 40832474 - 40832617
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| | |||||||||||||||||| | ||| |||| ||||||||||||||| ||    
T  40832474 atttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagtagtctaaaataccaaaatagtatttcgtcccccaaaaatcgtataaaac 40832573  T
Q  596 aaaa--aattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||  ||| |||||| |  ||||||| |||| |||||||||||    
T  40832574 aaaaataataattcaataatataaaaatttgtcatgtgttgttc 40832617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 449 - 636
Target Start/End: Complemental strand, 6896300 - 6896113
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||  ||||| | || |||| |||  ||| |||||||  |||||||||||||||| |||  || ||||||||||||||| ||| ||||| |||    
T  6896300 ttcagggacaaaacaaactggaggcaagggacaggataaaaactgaaatttttgtccctcaccaaacaacagcacaactttttgtcccacgtacaagttg 6896201  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    ||||||| |||||||||   ||| |||| ||||||  | ||||| |||| ||||||||||| | |||||||| |||| ||||||||||    
T  6896200 tctaaaacaccaaaatagcatttcgtcccccaaaaggcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgtt 6896113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 498 - 609
Target Start/End: Original strand, 30326338 - 30326449
Alignment:
Q  498 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 597  Q
    ||||||| ||| | ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||| | ||||||||  |||||||||||||| ||||    
T  30326338 ttttgtctctcgccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaa 30326437  T
Q  598 aaaattattcaa 609  Q
    ||||||| ||||    
T  30326438 aaaattactcaa 30326449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 41934679 - 41934553
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  |||| |||| | |||||||| |||  ||||||||||||||  || || || |||||||||||||||||||||  ||||||||||||||    
T  41934679 gacaaaaactgaaattcttgtacttcactaaaccacaacacaactttttgtcctacgtataagttgtctaaaataccaaaataacattttgtccaccaaa 41934580  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||| ||||||||| ||||| ||||||    
T  41934579 aatcatataagacataaaatcattcaa 41934553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 4641601 - 4641488
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||| ||||| ||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||   |||||| |  |||||||||||||| ||    
T  4641601 atttttgtctctcaccaaaccacagcacaactttttgtctcacatacaagttgtttaaaataccaaaatagcattttgttcctcaaaaatcgtataaaac 4641502  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  4641501 aaaaaattactcaa 4641488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 637
Target Start/End: Complemental strand, 37308787 - 37308599
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| |||||||||    
T  37308787 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattg 37308688  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||||| | ||||||||   |||||||||| || | ||||||||| ||||   ||| ||||| |||| |||||||||||    
T  37308687 tctaaaataccaaaatagtattttgtccctaaaaaatcgtaaaaca-aaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 37308599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 625
Target Start/End: Complemental strand, 13829537 - 13829394
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||  ||||||||||| |||||| | |||  |||||||||||||| ||  ||||| || ||||||| |||||||||   ||| ||||  |||    
T  13829537 ggacaaaaactgaaatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagttatctaaaacaccaaaatatcatttcgtccctcaa 13829438  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||| ||||| |||||||||||||||| |||||||||| ||||    
T  13829437 aaatcatataaaacaaaaaattattcaatatcataaaaatttgt 13829394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 619
Target Start/End: Complemental strand, 18278999 - 18278874
Alignment:
Q  484 acaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaa 583  Q
    |||||||||| ||||||||| ||||||||||||||  |||||||||||||| |||||||||||||| ||||||| ||        || ||||||||||||    
T  18278999 acaaaaactaaaatttttgttcctcactaaatcacgtcacaactttttgtctcacatacaaattgtataaaatagca--------ttatgtccaccaaaa 18278908  T
Q  584 atcgtataagacaaaaaattattcaacatcataaaa 619  Q
    || |||||||||  || ||||||||| |||||||||    
T  18278907 attgtataagac--aatattattcaatatcataaaa 18278874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 483 - 601
Target Start/End: Original strand, 12939292 - 12939410
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||||| |||| ||| ||| |||||||||||| || ||| ||||| |||||||| ||||||||||||  |||||||| |||||    
T  12939292 gacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtctaagataccaaaataacattttgtcccccaaa 12939391  T
Q  583 aatcgtataagacaaaaaa 601  Q
    |||| ||||| ||||||||    
T  12939392 aatcatataaaacaaaaaa 12939410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 18685934 - 18685808
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||| ||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||  |||||||  ||||||||  ||||    
T  18685934 gacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatattaaaataacattttgtccctcaaa 18685835  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||| ||||| ||||||||||| ||||    
T  18685834 aatcctataaaacaaaaaattactcaa 18685808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 12672479 - 12672592
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||| ||||| || ||  ||||| ||||||||||||||||||||   |||||||| ||||||||||||||| ||    
T  12672479 atttttgtccctcaccaaaccacaacacaagtttttatcccaagtacaagttgtctaaaataccaaaatagcattttgtcctccaaaaatcgtataaaac 12672578  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  12672579 aaaaaattactcaa 12672592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 496 - 637
Target Start/End: Original strand, 45463115 - 45463255
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||| ||||| ||| |||  ||||||||||||||| || |||| ||||||||||||| ||||||||  ||| |||| ||| ||||||||||| ||    
T  45463115 atttttgtcactcaccaaaccacaacacaactttttgtcatacgtacagattgtctaaaatatcaaaataacatttcgtcc-ccagaaatcgtataaaac 45463213  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||| ||    ||||||| |||| |||||||||||    
T  45463214 aaaaaattatttaatgcaataaaaatttgtcatgtgttgttc 45463255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 10399828 - 10399988
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||||||||   |  |||||||||||   |||||||||| |||||||| |||  |||||||||||||| ||  || || |||    
T  10399828 ttcaggtacaggacaaactagatgcaagatacaggacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtctcatgtataagttg 10399927  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||  ||||||||   |||||||| |||||| |||||||| ||||||||||||||||    
T  10399928 tctaaaaatccaaaatagcattttgtcccccaaaagtcgtataaaacaaaaaattattcaa 10399988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 496 - 604
Target Start/End: Original strand, 30798494 - 30798602
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| || |||||||||||||||||   ||||||||  |||||||||||||| ||    
T  30798494 atttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 30798593  T
Q  596 aaaaaatta 604  Q
    |||||||||    
T  30798594 aaaaaatta 30798602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 3913451 - 3913578
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   || |||||||||||| ||| |||  |||||||||||||  ||| ||||| ||||||||||||||||||||   |||||  | ||||    
T  3913451 ggacaaaaactcacatgtttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgctccccaa 3913550  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| |||||| |||||||||    
T  3913551 aaatcgtataaaacaaaatattattcaa 3913578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 449 - 552
Target Start/End: Original strand, 38623262 - 38623365
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||||||| |||||| | || ||||||||   ||||||||||  |||||||||||||||| ||| ||| ||||||||||||||| ||||||||| |||    
T  38623262 ttcagggacaggacaaacttgaggcaatggaaaagacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttg 38623361  T
Q  549 tcta 552  Q
    ||||    
T  38623362 tcta 38623365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 496 - 637
Target Start/End: Complemental strand, 2086157 - 2086015
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||  | ||| ||| | ||||||||||||  ||| ||||| |||||| ||||||||||||||  ||||||||  |||||||||||||| ||    
T  2086157 atttttgtccctacccaaaccacagtacaactttttgtttcacgtacaagttgtctgaaataccaaaataacattttgtccctcaaaaatcgtataaaac 2086058  T
Q  596 aaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    ||||||||| ||||   ||| ||||| |||| |||||||||||    
T  2086057 aaaaaattactcaatggcataaaaaatttgtcatgtgttgttc 2086015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 40692396 - 40692277
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    ||||||||||| | ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| |||||||||||| ||        ||||||||  |||    
T  40692396 ggacaaaaactcgtatttttgtccctcaccaaaccacagaacaactttttgtcccacgtacaagttgtctaaaatagca--------ttttgtccctcaa 40692305  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||||||||    
T  40692304 aaatcgtataaaacaaaaaattattcaa 40692277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 637
Target Start/End: Original strand, 27462807 - 27462946
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||||||||| |||| |||||| |||||| ||||||||||||||   ||| || | | |||||||||| || ||    
T  27462807 atttttgtccctcaccaaaccacaacacaactttttatcac-catacatattgtcaaaaataccaaaatagcatttcgtgccctaaaaatcgtaaaa-ac 27462904  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||  ||||| ||| |||| |||||||||||    
T  27462905 aaaaaattattcaatgtcatataaatttgtcatgtgttgttc 27462946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 18793297 - 18793379
Alignment:
Q  527 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||| ||| ||| ||||| |||||||||||||||||||||  |||||||| |||||||| |||||| ||||||||||| ||||    
T  18793297 ttttagtctcacgtacaagttgtctaaaataccaaaataacattttgtcctccaaaaattgtataaaacaaaaaattactcaa 18793379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 619
Target Start/End: Complemental strand, 1231010 - 1230873
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    ||||||||||||   ||||||||  |||||||| |||  | |||||||||||| ||  ||||||||  ||||||||| ||||||   |||||||||||||    
T  1231010 ggacaaaaactattctttttgtctttcactaaaccacatctcaactttttgtctcatgtacaaattacctaaaatacaaaaatatctttttgtccaccaa 1230911  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
     ||| ||||| ||| ||||||||||||| || ||||||    
T  1230910 caatagtatatgaccaaaaattattcaatataataaaa 1230873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 557
Target Start/End: Complemental strand, 1247232 - 1247171
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaata 557  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||| ||||| ||||||||||||    
T  1247232 atttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaata 1247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 11114957 - 11114844
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||| |||||| ||| |||  |||||||||||||| |||  |||| ||||||||||| |||||||| | ||| |||| | || |||||||||| ||    
T  11114957 atttttgttcctcaccaaaccacatcacaactttttgtcccacgcacaagttgtctaaaattccaaaatagtatttcgtccgctaacaatcgtataaaac 11114858  T
Q  596 aaaaaattattcaa 609  Q
     |||||||||||||    
T  11114857 gaaaaattattcaa 11114844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 637
Target Start/End: Complemental strand, 20907630 - 20907533
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |||||||||| |||||||| |||||||  |||| ||| |||||||||||| || ||||||||||||||||   |||||||| |||| || ||||||||    
T  20907630 tacaaattgtataaaatactaaaataacattttatcccccaaaaatcgtacaaaacaaaaaattattcaatgacataaaaatttgtcatatgttgttc 20907533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 505 - 637
Target Start/End: Original strand, 35473014 - 35473146
Alignment:
Q  505 cctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 604  Q
    |||||||||| ||||   ||| |||||||| ||| ||||| ||||||||||||||| ||||  ||||||||||  |||| | ||||||||| ||||||||    
T  35473014 cctcactaaaccactctgcaattttttgtcccacgtacaagttgtctaaaataccataatatccttttgtccataaaaatttgtataagaccaaaaatta 35473113  T
Q  605 ttcaacatcataaaaacttgtgatgtgttgttc 637  Q
    || || | ||| |||| |||| || ||||||||    
T  35473114 tttaataccatcaaaatttgtcatatgttgttc 35473146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 42365709 - 42365549
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| | || |||| |||   ||||||||||   |||||||||| |||  ||| |||  ||||||||||| |  |||  |||| |||    
T  42365709 ttcaggtacatgacaaactggaggcaagggacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaactttttatatcacggacaagttg 42365610  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  |||||||| | ||||||| ||||| ||||||||||| ||||    
T  42365609 tctaaaataccaaaataacattttgtcccctaaaaatcatataaaacaaaaaattactcaa 42365549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 496 - 599
Target Start/End: Original strand, 16177888 - 16177991
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||| || || ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||    ||| |||| ||||||||||||||| ||    
T  16177888 atttttgtcgcttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatggaatttcgtcccccaaaaatcgtataaaac 16177987  T
Q  596 aaaa 599  Q
    ||||    
T  16177988 aaaa 16177991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 482 - 637
Target Start/End: Original strand, 28824548 - 28824703
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| | ||| ||||||||||||| ||||||   ||| |  | ||||    
T  28824548 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatctcacgtgcaagttgtctaaaatactaaaatagcatttcgcaccccaa 28824647  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |||| |||||| ||||||| |||||| |  ||||||||| |||| |||| ||||||    
T  28824648 aaattgtataaaacaaaaatttattccatgtcataaaaatttgtcatgtattgttc 28824703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 38993062 - 38993189
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||| ||||||||| ||||   ||| |||  |||||||||||||| ||| ||||| ||||||||||||| ||||||   ||| |||  ||||    
T  38993062 ggacaaaaactacaatttttgttcctcgtcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcatttcgtcacccaa 38993161  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||  ||||| ||| ||||||||||||    
T  38993162 aaataatataatacagaaaattattcaa 38993189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 497 - 609
Target Start/End: Complemental strand, 39461401 - 39461286
Alignment:
Q  497 tttttgtccctcactaaatcactgca---caactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataag 593  Q
    |||||||||||||| |||||||  ||   ||||||||| || ||| |||||  |||||||||||||||||||   ||||||||  ||||||||||||||     
T  39461401 tttttgtccctcaccaaatcacaacaacacaactttttatctcacgtacaagctgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaa 39461302  T
Q  594 acaaaaaattattcaa 609  Q
    | ||||||||| ||||    
T  39461301 ataaaaaattactcaa 39461286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 527 - 606
Target Start/End: Original strand, 7294427 - 7294506
Alignment:
Q  527 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 606  Q
    |||||||| ||| ||||| ||||  |||||||||||||| |||||| | |||||||| || ||||||||||||| |||||    
T  7294427 tttttgtctcacgtacaagttgtaaaaaataccaaaatagtcttttattcaccaaaactcatataagacaaaaagttatt 7294506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 625
Target Start/End: Complemental strand, 30712959 - 30712813
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaat----cactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcca 577  Q
    ||||| |||||  |||||||||||||||| ||||    |||  ||||||||||| || ||| || || |||||||||| |||||||||   |||  |||     
T  30712959 ggacacaaactgaaatttttgtccctcaccaaattaaccacaacacaactttttatcccacgtagaagttgtctaaaacaccaaaatatcatttcatcc- 30712861  T
Q  578 ccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||| ||||| |||||||||||||||| | |||||||| ||||    
T  30712860 ccaaaaatcatataaaacaaaaaattattcaataccataaaaatttgt 30712813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 779 - 822
Target Start/End: Original strand, 21186640 - 21186683
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||    
T  21186640 cacatgtgattacgttcaaataattcactttctcaaatcattac 21186683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 779 - 818
Target Start/End: Original strand, 26144332 - 26144371
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaatta 818  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  26144332 cacatgtgattccgttcaaataattaattttctcaaatta 26144371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 606
Target Start/End: Complemental strand, 31148847 - 31148784
Alignment:
Q  543 aaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 606  Q
    ||||||||||||||| ||||||| | |||| |||| || |||| |||||| |||||||||||||    
T  31148847 aaattgtctaaaatatcaaaatagttttttatccaacacaaattgtataaaacaaaaaattatt 31148784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 584
Target Start/End: Original strand, 16062130 - 16062186
Alignment:
Q  527 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaa 584  Q
    |||||||| ||||||||| |||||||||||  ||||||||  ||||||||||||||||    
T  16062130 tttttgtcccacatacaa-ttgtctaaaatgacaaaataacattttgtccaccaaaaa 16062186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 4e-40; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 449 - 625
Target Start/End: Complemental strand, 3735489 - 3735313
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| | || ||||||||  |||||||||||   |||||||||| |||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  3735489 ttcaggtacatgacaaaatggaggcaatggacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtcccacgtacaagttg 3735390  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| ||||||||||||||||  ||||||||| ||||    
T  3735389 tctaaaataccaaaataacattttgtcctccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 3735313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 40489436 - 40489309
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||  ||||||||  |||    
T  40489436 ggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacatacaagttgtctaaaataccaaaataacattttgtccctcaa 40489337  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    |||| |||||| ||||||||||| ||||    
T  40489336 aaattgtataaaacaaaaaattactcaa 40489309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 39918606 - 39918479
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  |||||||| ||||    
T  39918606 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcccccaa 39918507  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||| ||||||| ||||    
T  39918506 aaatcgtataaaacataaaattactcaa 39918479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 496 - 637
Target Start/End: Complemental strand, 31644531 - 31644390
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   |||||||| | ||||||| ||||| ||    
T  31644531 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccctaaaaatcatataaaac 31644432  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    | ||||||||||||  ||||||||| ||||  ||||||||||    
T  31644431 ataaaattattcaatgtcataaaaatttgtcttgtgttgttc 31644390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 482 - 637
Target Start/End: Original strand, 41790459 - 41790615
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||||||||||||||||| |||||||  |||||||| ||||    
T  41790459 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatactaaaataacattttgtcccccaa 41790558  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaa-acttgtgatgtgttgttc 637  Q
    ||||||||||| ||| ||||||| ||||   ||||||| | |||| |||||||||||    
T  41790559 aaatcgtataaaacataaaattactcaatgccataaaatatttgtcatgtgttgttc 41790615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 2351779 - 2351652
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||    
T  2351779 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaa 2351680  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    |||||||| || ||||||||||| ||||    
T  2351679 aaatcgtacaaaacaaaaaattactcaa 2351652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 32528814 - 32528687
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  32528814 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 32528715  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||||||||    
T  32528714 aaatcgtataaaacaaaaaattattcaa 32528687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 637
Target Start/End: Original strand, 32092946 - 32093133
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| || |||| |||| |||||||||||  ||||||||||| |||| ||| ||| ||||||||||||||| ||| ||||||||     
T  32092946 ttcaggaacaggacaaattggaggcaaaggataggacaaaaactgaaatttttgtcc-tcaccaaaccacagcacaactttttgtcccacgtacaaatta 32093044  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |||||||||||||||||   ||| |||| ||||||||  ||||| ||| |||| | ||||| | |||||||| ||||| |||| |||||    
T  32093045 tctaaaataccaaaatagcatttcgtcccccaaaaattatataaaacataaaaattttcaataccataaaaatttgtgttgtgctgttc 32093133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 34795019 - 34794859
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| || || |||    
T  34795019 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtataagttg 34794920  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   |||||| | |||||| |||||||| ||||||||||||||||    
T  34794919 tctaaaataccaaaatagcattttgttccccaaaattcgtataaaacaaaaaattattcaa 34794859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 604
Target Start/End: Original strand, 21739125 - 21739280
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  21739125 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 21739224  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 604  Q
    |||||||||||||||||   ||||||||  ||||||| |||||| |||||||||||    
T  21739225 tctaaaataccaaaatagcattttgtccctcaaaaattgtataaaacaaaaaatta 21739280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 482 - 620
Target Start/End: Complemental strand, 39788292 - 39788153
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataa-tcttttgtccacca 580  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||| |||||||   |||||||| |||    
T  39788292 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatactaaaataacatttttgtccccca 39788193  T
Q  581 aaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||| ||||||||||| |||| | ||||||||    
T  39788192 aaaatcgtataaaacaaaaaattactcaataccataaaaa 39788153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 4818138 - 4818264
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||   |||    
T  4818138 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaa 4818237  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  4818238 aatcgtataaaacaaaaaattactcaa 4818264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 496 - 637
Target Start/End: Complemental strand, 24036315 - 24036176
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| |||||||||||||||||||||  |||||  | ||||||||||||||| ||    
T  24036315 atttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaataacattttgcaccccaaaaatcgtataaaac 24036216  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||  ||  ||||| |||| |||||||||||    
T  24036215 aaaaaattattcaatgtc--aaaaatttgtcatgtgttgttc 24036176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 620
Target Start/End: Original strand, 31880073 - 31880211
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||| ||||||  || ||||| ||||||||||||||||||||   |||||||| ||||    
T  31880073 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactatttgtcctacgtacaagttgtctaaaataccaaaatagcattttgtcccccaa 31880172  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
     |||||||||| ||||||||||||||||  |||||||||    
T  31880173 caatcgtataatacaaaaaattattcaatgtcataaaaa 31880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 496 - 637
Target Start/End: Original strand, 4689709 - 4689850
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||| ||||||||| |||||||  ||| |  | |||||| |||||||| ||    
T  4689709 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgcctaaaatacaaaaataacatttcgagccccaaaagtcgtataaaac 4689808  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||  ||||||||| |||| |||||||||||    
T  4689809 aaaaaattattcaatgtcataaaaatttgtcatgtgttgttc 4689850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 7208241 - 7208354
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   |||||| |  |||||||||||||| ||    
T  7208241 atttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgttcctcaaaaatcgtataaaac 7208340  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  7208341 aaaaaattactcaa 7208354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 483 - 604
Target Start/End: Original strand, 22493417 - 22493537
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||||||| ||||| |||||||||||| |||||||   ||||||||  ||||    
T  22493417 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcacacgtacaagttgtctaaaatatcaaaatagcattttgtcc-gcaaa 22493515  T
Q  583 aatcgtataagacaaaaaatta 604  Q
    |||||||||| |||||||||||    
T  22493516 aatcgtataaaacaaaaaatta 22493537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 601
Target Start/End: Complemental strand, 7523304 - 7523152
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  7523304 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttg 7523205  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 601  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||    
T  7523204 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaa 7523152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 553495 - 553368
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgt-ccaccaa 581  Q
    ||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||||  |||||| || ||||    
T  553495 gacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccccccaa 553396  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||| ||||||||||||    
T  553395 aaatcgtataaaacataaaattattcaa 553368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 625
Target Start/End: Original strand, 18470426 - 18470568
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  ||||||||||||| || ||| ||| |||||||||||| || ||| ||||| |||||||||| ||||||||||  ||| |||| |||||    
T  18470426 gacaaaaactgaaatttttgtcccttaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaacaccaaaataacatttcgtcccccaaa 18470525  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    || | ||||| |||| ||||||||||| | |||||||| ||||    
T  18470526 aagcatataaaacaagaaattattcaataccataaaaatttgt 18470568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 28090518 - 28090644
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| |||  ||  |||||||||||||| ||| ||||| ||||||||||||| |||||||  ||||||||  ||||    
T  28090518 gacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaataacattttgtccctcaaa 28090617  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  28090618 aatcgtataaaacaaaaaattactcaa 28090644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 496 - 625
Target Start/End: Original strand, 7770290 - 7770419
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||| |||| ||| ||| ||||||||||||||| ||| ||||| ||| ||||||||| |||||||  ||| |  | ||||||||||||||| ||    
T  7770290 atttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaac 7770389  T
Q  596 aaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||||||||  ||||||||| ||||    
T  7770390 aaaaaattattcaatgtcataaaaatttgt 7770419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 606
Target Start/End: Complemental strand, 17031289 - 17031132
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||  ||||||| || |||| |||  ||||||||||   |||||||| |||||| |||||||| ||||||||||| ||| ||| ||||| ||     
T  17031289 ttcagggacagtacaaattggaggcaaaggacaggacaaaaacataaatttttgcccctcattaaatcacagcacaacttttcgtcccacgtacaagtta 17031190  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 606  Q
    | |||||||| ||||||   |||||||||| ||||||| |||||||| ||||||||||    
T  17031189 tttaaaatacaaaaatagctttttgtccacaaaaaatcatataagaccaaaaattatt 17031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 41459674 - 41459561
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||  ||||||||||||||  ||| ||||| |||||||||||| ||||||||  ||||||||  |||||||||||||| ||    
T  41459674 atttttgtccctcaccaaaccagagcacaactttttgttccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaac 41459575  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  41459574 aaaaaattactcaa 41459561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 29241510 - 29241350
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||||| || |||| |||  || ||||| ||   ||||||||||||| | ||| ||| ||||||||||||||| ||| ||||| |||    
T  29241510 ttcaggtacatgacaaattggaggcaagggacaggccaaaagctcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttg 29241411  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
     |||||||| |||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  29241410 gctaaaatatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 29241350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 24181621 - 24181748
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||| ||||||||||| ||| || || ||||||||||||||||||||   |||||||| ||||    
T  24181621 ggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtcccccaa 24181720  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    | ||||||||| |||| |||||| ||||    
T  24181721 agatcgtataaaacaacaaattactcaa 24181748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 483 - 637
Target Start/End: Original strand, 8560980 - 8561133
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||| |||||| ||| |||  |||||||||||||  ||  ||||| |||||||||||||||||||||  ||| |||| |||||    
T  8560980 gacaaaaactgatatttttgttcctcaccaaaccacatcacaactttttgttccaggtacaagttgtctaaaataccaaaataacatttcgtcc-ccaaa 8561078  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |||||||||| ||||||||||| ||||   |||||||| |||| |||| ||||||    
T  8561079 aatcgtataaaacaaaaaattaatcaatgccataaaaatttgtcatgttttgttc 8561133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 11963439 - 11963313
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| | ||| ||||||||||||||||||||   ||||||||  ||||    
T  11963439 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtgcaagttgtctaaaataccaaaatagcattttgtccctcaaa 11963340  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| | | ||||||| ||||    
T  11963339 aatcgtataaaatacaaaattactcaa 11963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 482 - 604
Target Start/End: Complemental strand, 35701376 - 35701254
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  || ||||||||||  ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  35701376 ggacaaaaactcatatttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 35701277  T
Q  582 aaatcgtataagacaaaaaatta 604  Q
    ||||||||||| |||||||||||    
T  35701276 aaatcgtataaaacaaaaaatta 35701254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 620
Target Start/End: Original strand, 6311658 - 6311794
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||| ||||||||| |||||| | | |||  |||||||||| ||| || |||||||||||||||| ||||||||||| || ||||||||||||    
T  6311658 gacaaaaactaaaatttttgttcctcac-ataccacaacacaacttttagtcccaaatacaaattgtctaaattaccaaaataacctcttgtccaccaaa 6311756  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||   |||||||||||| | | ||||| | ||||||||    
T  6311757 aaatttataagacaaaataatgttcaataccataaaaa 6311794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 40182549 - 40182436
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||  ||||| ||||||||||||||||||||   |||||||   |||||||||||||| ||    
T  40182549 atttttgtccctcaccaaaccacatcacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaatcgtataaaac 40182450  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  40182449 aaaaaattactcaa 40182436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 496 - 604
Target Start/End: Original strand, 700612 - 700720
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||| |||||| ||| |||  |||||||||||||| ||| ||||| || ||||||||||||||||| | |||||||| || |||||| ||||| ||    
T  700612 atttttgttcctcaccaaaccacaacacaactttttgtctcacgtacaagttatctaaaataccaaaatattattttgtcccccgaaaatcatataaaac 700711  T
Q  596 aaaaaatta 604  Q
    |||||||||    
T  700712 aaaaaatta 700720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 31770588 - 31770715
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||| |||||||| ||| |||  |||||||||||||| ||| ||||| |||||| |||||||||||||   ||||||||  |||    
T  31770588 ggacaaaaactcatatttttatccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctgaaataccaaaatagcattttgtccctcaa 31770687  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||| ||||| ||||||||||| ||||    
T  31770688 aaatcatataaaacaaaaaattactcaa 31770715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 5571655 - 5571766
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||||||||||||  || ||||| ||||||||||||||||||||     |||||| ||||||||||||||| ||    
T  5571655 atttttgtccctcaccaaaccacaacacaactttttgtccaacgtacaagttgtctaaaataccaaaata--gcattgtcccccaaaaatcgtataaaac 5571752  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  5571753 aaaaaattactcaa 5571766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 23091302 - 23091428
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||||| |||  ||| |||  |||||||||||||| ||| || ||||||||||||||| ||||||||  ||||||||  ||||    
T  23091302 gacaaaaactcatatttttgtccgtcatcaaaccacaacacaactttttgtctcacgtataaattgtctaaaatatcaaaataacattttgtccctcaaa 23091401  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| |||||| |||| ||||    
T  23091402 aatcgtataaaacaaaacattactcaa 23091428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 497 - 609
Target Start/End: Original strand, 6284310 - 6284423
Alignment:
Q  497 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc-aaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||| |||||||| ||||||   ||||||||  |||||||||||||| ||    
T  6284310 tttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtccaaaataccaaaaatagcattttgtccctcaaaaatcgtataaaac 6284409  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  6284410 aaaaaattactcaa 6284423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 495 - 592
Target Start/End: Original strand, 27839083 - 27839180
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataa 592  Q
    |||||||||||||||| ||| ||    ||||||||||||| ||  ||||| ||||||||||||||||||||  ||||||||| |||||||||||||||    
T  27839083 aatttttgtccctcaccaaaccataaaacaactttttgtctcatgtacaagttgtctaaaataccaaaatagccttttgtcctccaaaaatcgtataa 27839180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 496 - 604
Target Start/End: Complemental strand, 5673224 - 5673121
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| |||     |||||||||| ||||||||  |||||||| ||||||||||||||| ||    
T  5673224 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtac-----gtctaaaatatcaaaataacattttgtcccccaaaaatcgtataaaac 5673130  T
Q  596 aaaaaatta 604  Q
    |||||||||    
T  5673129 aaaaaatta 5673121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 7725807 - 7725933
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||||| ||| |||| |||  |||||||||||||| ||| || || |||||||||   ||||||||   ||| |||| |||||    
T  7725807 gacaaaaactcatatttttgtccttcattaaaccacaacacaactttttgtcccacgtataagttgtctaaatatccaaaatagcatttcgtcccccaaa 7725906  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||||||||    
T  7725907 aatcgtataaaacaaaaaattattcaa 7725933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 482 - 566
Target Start/End: Complemental strand, 8136936 - 8136852
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataa 566  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||||||||||  || ||||| |||||||||||||||||||||    
T  8136936 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaataccaaaataa 8136852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 482 - 601
Target Start/End: Original strand, 22432306 - 22432425
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||  ||| |||  ||||| |||||||| ||  ||||| ||||||||||||||||||||   ||| |||| ||||    
T  22432306 ggacaaaaactgatatttttgtccctcatcaaaccacaacacaattttttgtctcaagtacaagttgtctaaaataccaaaatagcatttcgtcccccaa 22432405  T
Q  582 aaatcgtataagacaaaaaa 601  Q
    ||||||||||| | ||||||    
T  22432406 aaatcgtataaaaaaaaaaa 22432425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 539 - 601
Target Start/End: Complemental strand, 612582 - 612520
Alignment:
Q  539 atacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 601  Q
    |||||| |||||||| ||||||||||| | |||||| ||||||| ||||||||||||||||||    
T  612582 atacaagttgtctaacataccaaaatactattttgttcaccaaacatcgtataagacaaaaaa 612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 779 - 822
Target Start/End: Complemental strand, 9895197 - 9895154
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  9895197 cacatgtgattacgttcaaataatttattttctcaaattattac 9895154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 779 - 822
Target Start/End: Complemental strand, 15086748 - 15086705
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  15086748 cacatgtgattacgttcaaataattcactttctcaaattattac 15086705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 482 - 619
Target Start/End: Complemental strand, 35760761 - 35760622
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttt-tgtcacacatacaaattgtctaaaatac-caaaataatcttttgtccacc 579  Q
    ||||||||||   |||||||||||||| || ||||||  ||||  |||| ||| |||  |||||||  |||||||||| ||||||| | |||| |||||     
T  35760761 ggacaaaaacataaatttttgtccctcgctgaatcacaacacagtttttctgttacaggtacaaatcatctaaaatacgcaaaatagttttttatccact 35760662  T
Q  580 aaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||||||||||||| ||||||||||  ||||| |||||    
T  35760661 aaaaatcgtataagaccaaaaattatttgacatcgtaaaa 35760622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 8360476 - 8360395
Alignment:
Q  527 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||| || |||||| ||||||||||||| ||||||||||||| || | ||||||| |||||  | ||||||||||||||    
T  8360476 tttttgtctcaaatacaagttgtctaaaatactaaaataatcttttatctatcaaaaat-gtatactataaaaaattattcaa 8360395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 540 - 600
Target Start/End: Complemental strand, 1338661 - 1338601
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaa 600  Q
    ||||| |||||||||||| ||||||||| ||||||||| |||| ||||||||  |||||||    
T  1338661 tacaagttgtctaaaatatcaaaataattttttgtccatcaaatatcgtatataacaaaaa 1338601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 565 - 637
Target Start/End: Complemental strand, 32313854 - 32313782
Alignment:
Q  565 aatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||| ||||||||||||||||  |||||||| |||| |  ||| ||| |||| |||||||||||    
T  32313854 aatcttttgtccagcaaaaatcgtataagatcaaaaattaatcaatactatacaaatttgtcatgtgttgttc 32313782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 566
Target Start/End: Complemental strand, 5598541 - 5598495
Alignment:
Q  520 gcacaactttttgtcacacatacaaattgtctaaaataccaaaataa 566  Q
    ||||||||||||||| ||| ||||| |||||||||||| ||||||||    
T  5598541 gcacaactttttgtctcacgtacaacttgtctaaaatatcaaaataa 5598495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 620
Target Start/End: Complemental strand, 35955044 - 35954974
Alignment:
Q  551 taaaataccaaaataatcttttgtccaccaaaaa-tcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||| |||||||  |||| || |||||||| |||||| |||||||||||||||||| | ||||||||    
T  35955044 taaaatactaaaataactttttctctaccaaaaaatcgtattagacaaaaaattattcaataccataaaaa 35954974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 563
Target Start/End: Original strand, 11090861 - 11090946
Alignment:
Q  478 gattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaa 563  Q
    |||||||| ||||||  |||| ||| ||||||||||  |||  |||||||||||||| ||| ||||  |||||||||||| |||||    
T  11090861 gattggacgaaaactgaaattcttgaccctcactaagccacgacacaactttttgtctcacgtacacgttgtctaaaatatcaaaa 11090946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 4e-34; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 482 - 620
Target Start/End: Original strand, 17327715 - 17327853
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||  |||||||| ||||||||||||||||||| |||||||| ||||    
T  17327715 ggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtctcatgtacaaattatctaaaataccaaaataatattttgtcccccaa 17327814  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||||||||| |||| |||||| |||||  ||||||||    
T  17327815 aaatcgtataaaacaacaaattactcaacgccataaaaa 17327853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 460 - 636
Target Start/End: Complemental strand, 39282024 - 39281848
Alignment:
Q  460 gacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc 559  Q
    |||||| ||||||||| |||  |||||||||||   ||||||||||||||| ||| ||| | |||||||||||||  || ||||| ||||||||||||||    
T  39282024 gacaaactagatgcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaatacc 39281925  T
Q  560 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    |||||||  ||| |||| ||||||||||||||| ||| ||||||||||||  ||||| ||| |||| ||||||||||    
T  39281924 aaaataacatttcgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaagttgtcatgtgttgtt 39281848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 496 - 637
Target Start/End: Complemental strand, 38663226 - 38663085
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| |||||||||||| ||||||||  ||||||||  |||||||||||||| ||    
T  38663226 atttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaac 38663127  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||  ||||||||| ||||  ||||||||||    
T  38663126 aaaaaattattcaatgtcataaaaatttgtcctgtgttgttc 38663085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 844757 - 844917
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  844757 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 844856  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  844857 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 844917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 16476188 - 16476348
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| ||||||||| |||  ||| |||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  16476188 ttcaggtacaggacaaactagatgcaagggacaggataaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttg 16476287  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   |||||||| |||||||| |||||| ||| ||||||||||||    
T  16476288 tctaaaataccaaaatagcattttgtcccccaaaaattgtataaaacataaaattattcaa 16476348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 26118248 - 26118408
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||| || || |||    
T  26118248 ttcaggtacaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtaaaagttg 26118347  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||||||||    
T  26118348 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 26118408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 483 - 625
Target Start/End: Original strand, 11772699 - 11772841
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| |||||||||| | ||||||||||||| | ||| |||| |||||    
T  11772699 gacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacctacaaattgttttaaataccaaaatagtatttcgtcccccaaa 11772798  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    |||||||||| ||||||||| |||||| | |||||||| ||||    
T  11772799 aatcgtataaaacaaaaaataattcaaaaccataaaaatttgt 11772841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 498 - 636
Target Start/End: Original strand, 15539972 - 15540110
Alignment:
Q  498 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 597  Q
    |||||||  |||| ||| ||| |||||||||||||||| || || || |||||||||| ||||||||||  |||||||| ||||||||| ||||| ||||    
T  15539972 ttttgtctttcaccaaaccacagcacaactttttgtcatacgtagaagttgtctaaaacaccaaaataacattttgtcccccaaaaatcatataaaacaa 15540071  T
Q  598 aaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    |||||||||||| | ||||||||||||| ||||||||||    
T  15540072 aaaattattcaataccataaaaacttgtcatgtgttgtt 15540110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 449 - 637
Target Start/End: Original strand, 13994108 - 13994296
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||| |||||||||||||| || |||| | | ||||||||||||  |||||||||||||||| ||| |||  |||||||||||||| ||  ||||| |||    
T  13994108 ttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtctcatgtacaagttg 13994207  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcata-aaaacttgtgatgtgttgttc 637  Q
    |||||||||||||||||   ||| |||| ||||||||| ||||| ||| |||||||||||| |||||| |||| ||||  ||||||||||    
T  13994208 tctaaaataccaaaatagcatttcgtcc-ccaaaaatcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgttgttc 13994296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 496 - 604
Target Start/End: Complemental strand, 1601267 - 1601159
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||   ||||||||||||||||||||| || ||    
T  1601267 atttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccaccaaaaatcgtacaaaac 1601168  T
Q  596 aaaaaatta 604  Q
    |||||||||    
T  1601167 aaaaaatta 1601159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 16386995 - 16386835
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  16386995 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttg 16386896  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  16386895 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 16386835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 42510633 - 42510506
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||| ||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  42510633 ggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 42510534  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||||||||    
T  42510533 aaatcgtataaaacaaaaaattattcaa 42510506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 6711079 - 6711239
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  ||||| |||||||| ||| ||||| |||    
T  6711079 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttg 6711178  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  6711179 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 6711239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 452 - 619
Target Start/End: Complemental strand, 6771506 - 6771338
Alignment:
Q  452 agggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtct 551  Q
    |||||||||| ||||||||  ||| |||   ||||||||||| |||| ||||| |||||||||||||  ||||||||||| || ||||||||| ||| ||    
T  6771506 agggacatgataaattagagacaagggacaagacaaaaactaaaattcttgtcactcactaaatcacaacacaactttttctcccacatacaagttgact 6771407  T
Q  552 aaaataccaaaataatcttttgtcca-ccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||| ||||||||| |||||||||   |||||||||||||||| ||  ||||||||| | |||||||    
T  6771406 aaaatatcaaaataatattttgtccataaaaaaatcgtataagactaagtattattcaataccataaaa 6771338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 16451268 - 16451108
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||||||||| |||    
T  16451268 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacatacaagttg 16451169  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  16451168 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 16451108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 497 - 609
Target Start/End: Complemental strand, 31004225 - 31004113
Alignment:
Q  497 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagaca 596  Q
    |||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||| | ||| |||| ||||||||| ||||| |||    
T  31004225 tttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtatttcgtcccccaaaaatcctataaaaca 31004126  T
Q  597 aaaaattattcaa 609  Q
    |||||||||||||    
T  31004125 aaaaattattcaa 31004113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 482 - 625
Target Start/End: Original strand, 6029367 - 6029510
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||  |||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||| ||||||||||  ||| |||| ||||    
T  6029367 ggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtcccccaa 6029466  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||| | ||||| |||| ||||||||||| | |||||||| ||||    
T  6029467 aaagcatataaaacaagaaattattcaataccataaaaatttgt 6029510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 28340370 - 28340496
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  28340370 gacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 28340469  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  28340470 aatcgtataaaacaaaaaattactcaa 28340496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 604
Target Start/End: Original strand, 30105746 - 30105868
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||| ||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  30105746 ggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 30105845  T
Q  582 aaatcgtataagacaaaaaatta 604  Q
    ||||||||||| |||||||||||    
T  30105846 aaatcgtataaaacaaaaaatta 30105868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 45490942 - 45491068
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  45490942 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 45491041  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  45491042 aatcgtataaaacaaaaaattactcaa 45491068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 460 - 609
Target Start/End: Complemental strand, 16437492 - 16437343
Alignment:
Q  460 gacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc 559  Q
    |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||| |    
T  16437492 gacaaactagaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatc 16437393  T
Q  560 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  16437392 aaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaa 16437343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 609
Target Start/End: Complemental strand, 10384496 - 10384348
Alignment:
Q  461 acaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacca 560  Q
    ||||||| ||||||| |||   ||||||||||   |||||||||| |||||||| ||| ||||||||||||||| ||| |||||||| |||||||   ||    
T  10384496 acaaattggatgcaaaggacaagacaaaaactcatatttttgtccttcactaaaccacagcacaactttttgtcccacgtacaaattatctaaaaattca 10384397  T
Q  561 aaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||  ||| |||| ||||||||| ||||| ||||||||||||||||    
T  10384396 aaataacatttcgtcccccaaaaatcttataaaacaaaaaattattcaa 10384348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 520 - 620
Target Start/End: Complemental strand, 46154970 - 46154870
Alignment:
Q  520 gcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||||||| ||||| ||||||||||||||||  ||||||||    
T  46154970 gcacaactttttgtcccacttacaagttgtctaaaataccaaaataacattttgtccttcaaaaatcttataaaacaaaaaattattcaatgtcataaaa 46154871  T
Q  620 a 620  Q
    |    
T  46154870 a 46154870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 472 - 620
Target Start/End: Original strand, 50382459 - 50382607
Alignment:
Q  472 gcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttt 571  Q
    ||||||||  |||||||||||  ||||||||||| |||| ||| |||  |||||||||||||| ||| ||||| |||||||||| || |||||||  |||    
T  50382459 gcaatggacaggacaaaaactgaaatttttgtccttcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacacaaaaataacattt 50382558  T
Q  572 tgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||  |||||||| ||||| |||||| ||||||||| | ||||||||    
T  50382559 tgtccctcaaaaatcatataaaacaaaatattattcaataccataaaaa 50382607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 12890346 - 12890219
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| |||||||| |||||||||||   ||||||||  |||    
T  12890346 ggacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaagttgtctaagataccaaaatagcattttgtccctcaa 12890247  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  12890246 aaatcgtataaaacaaaaaattactcaa 12890219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 496 - 603
Target Start/End: Complemental strand, 16704820 - 16704713
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||||| || ||| |||  ||||||| |||||| ||||||||| ||||||||||||||||||||   |||||||| ||||||||||||||| ||    
T  16704820 atttttgtcccttaccaaaccacatcacaactctttgtctcacatacaagttgtctaaaataccaaaatagctttttgtcctccaaaaatcgtataaaac 16704721  T
Q  596 aaaaaatt 603  Q
    ||||||||    
T  16704720 aaaaaatt 16704713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 35387377 - 35387504
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||  ||| ||||| ||||||||||||||||||||   |||| |||  |||    
T  35387377 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttatccctcaa 35387476  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  35387477 aaatcgtataaaacaaaaaattactcaa 35387504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 42512836 - 42512963
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||||| |||||  ||| |||  ||||||||||||||  || |||||||||||||||||| |||||||   |||||||| ||||    
T  42512836 ggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcctacgtacaaattgtctaaaatatcaaaatagaattttgtcccccaa 42512935  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||||||||    
T  42512936 aaatcgtataaaacaaaaaattattcaa 42512963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 449 - 637
Target Start/End: Complemental strand, 17888089 - 17887899
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||| | ||| |||  |||||||||||||| ||| ||||| |||    
T  17888089 ttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttg 17887990  T
Q  549 tctaaaataccaaaataatcttttgt-ccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||||||  |||||| || ||||||||||||||| |||| |||||| ||||   ||| ||||| |||| |||||||||||    
T  17887989 tctaaaataccaaaataacattttgtccccccaaaaatcgtataaaacaacaaattactcaatgccataaaaaatttgtcatgtgttgttc 17887899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 25539962 - 25539836
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||| | |||||||||||||   ||| |||| |||||    
T  25539962 gacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagcatttcgtcccccaaa 25539863  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||||||||    
T  25539862 aatcgtataaaacaaaaaattattcaa 25539836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 640
Target Start/End: Original strand, 41967916 - 41968074
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||||||| || ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||  ||||||||  |||||    
T  41967916 gacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagccttttgtctcccaaa 41968015  T
Q  583 aatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttccgc 640  Q
    ||| |||||| ||||||||||| |||   |||| ||||| |||| |||| |||||||||    
T  41968016 aattgtataaaacaaaaaattactcattgtcataaaaaatttgtcatgtattgttccgc 41968074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 625
Target Start/End: Complemental strand, 50304758 - 50304616
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||||||||   ||| ||| ||||||||||||||| ||| |  || |||||||||||| |||||||   |||||||| |||||    
T  50304758 gacaaaaactgatatttttgtccctctgcaaaccacagcacaactttttgtctcacgtttaagttgtctaaaatatcaaaatagcattttgtcctccaaa 50304659  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    |||||||||| ||||||||||||||||  ||||||||| ||||    
T  50304658 aatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 50304616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 543 - 619
Target Start/End: Original strand, 30798818 - 30798894
Alignment:
Q  543 aaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    ||||| ||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  30798818 aaattatctaaaataccaaaatagtttgttgtccaccaaaaatcgtataagaccaaaaattattcaatatcataaaa 30798894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 32270461 - 32270334
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||  ||||| |||||||||||| |||||||   ||||||||  |||    
T  32270461 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtccctcaa 32270362  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||| ||||| ||||||||||| ||||    
T  32270361 aaatcatataaaacaaaaaattactcaa 32270334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 449 - 619
Target Start/End: Original strand, 32289377 - 32289547
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| || |||| |||   ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||  ||| ||||| |||    
T  32289377 ttcaggtacaggacaaattggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttg 32289476  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    | |||||||||||||||   ||||||||  |||||||  ||||| ||| ||||||||||||  ||||||||    
T  32289477 tttaaaataccaaaatagcattttgtccctcaaaaattatataaaacataaaattattcaatgtcataaaa 32289547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 551 - 637
Target Start/End: Original strand, 47092977 - 47093063
Alignment:
Q  551 taaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |||||||| |||||||| |||||| ||| |||||||||||||| ||||||||||||||| || ||||||| |||| |||||||||||    
T  47092977 taaaatacaaaaataattttttgttcacaaaaaatcgtataaggcaaaaaattattcaatattataaaaatttgtcatgtgttgttc 47093063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 495 - 637
Target Start/End: Complemental strand, 570483 - 570339
Alignment:
Q  495 aatttttgtccctcactaaatcac--tgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataa 592  Q
    |||||||||||||||| ||| |||  |||||||||||||||| | | || || |||||||||||| ||||||||  |||| |||||||||||| ||||||    
T  570483 aatttttgtccctcaccaaaccacaatgcacaactttttgtctcgcgtataagttgtctaaaatatcaaaataacattttttccaccaaaaattgtataa 570384  T
Q  593 gacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    || |||||| ||||||  | |||||||| || |  ||||||||||    
T  570383 gataaaaaagtattcagtaccataaaaatttatcttgtgttgttc 570339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 482 - 591
Target Start/End: Original strand, 26764861 - 26764970
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||||||||||||  || |||  |||||||||||||| ||| ||||| |||||||||||||||||||||| ||| ||||  |||    
T  26764861 ggacaaaaacttatatttttgtccctcaccgaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataatatttcgtccctcaa 26764960  T
Q  582 aaatcgtata 591  Q
    ||||||||||    
T  26764961 aaatcgtata 26764970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 604
Target Start/End: Complemental strand, 41973018 - 41972898
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| |||   ||||||||||||| ||| ||||| |||||||||||||||||||||  |||||||| |  ||    
T  41973018 gacaaaaactcatatttttgtccctcaccaaaccacactacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcc-ctcaa 41972920  T
Q  583 aatcgtataagacaaaaaatta 604  Q
    |||||||||| |||||||||||    
T  41972919 aatcgtataaaacaaaaaatta 41972898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 449 - 637
Target Start/End: Original strand, 44738075 - 44738263
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||||||||| || || |||| |||  |||| ||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  44738075 ttcaggtacatgacaacttggaggcaagggacaggaccaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttg 44738174  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    ||||||||| ||||||| | |||| | |  |||||||||||||| ||||||||||| ||||   ||| ||||| |||| |||||||||||    
T  44738175 tctaaaatagcaaaatagt-ttttattcctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 44738263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 482 - 602
Target Start/End: Original strand, 1351501 - 1351621
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   |||||||   |||    
T  1351501 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtctctcaa 1351600  T
Q  582 aaatcgtataagacaaaaaat 602  Q
    ||||| ||||| |||||||||    
T  1351601 aaatcatataaaacaaaaaat 1351621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 625
Target Start/End: Original strand, 6144019 - 6144195
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||| ||||||||||| | || |||| |||  |||||||||||  ||||||||||||||   ||| |||  ||||||||||| || ||| || || |||    
T  6144019 ttcagagacatgacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcggcaaaccacaacacaactttttctcccacgtagaagttg 6144118  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||| || |||||||  |||||||  ||||||||| ||||| ||| |||||||||||| | |||||||| ||||    
T  6144119 tctaaaacacaaaaataacattttgtcacccaaaaatcatataaaacagaaaattattcaataccataaaaatttgt 6144195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 7184059 - 7183899
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||||||||| || ||| |||  ||||||||||||||  || ||||| |||    
T  7184059 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcctacgtacaagttg 7183960  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||| ||| | |||||||   |||||||||||||| ||||||||||| ||||    
T  7183959 tctaaaataccaatatagtattttgtctctcaaaaatcgtataaaacaaaaaattactcaa 7183899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 483 - 631
Target Start/End: Complemental strand, 45658928 - 45658780
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| |||| | |||||||||||||   ||| |||| |||||    
T  45658928 gacaaaaactgatatttttgtcgctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagcatttcgtcccccaaa 45658829  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtg 631  Q
    |||| ||||| ||||||||||||||||   |||||||| |||| |||||    
T  45658828 aatcatataaaacaaaaaattattcaaagccataaaaatttgtcatgtg 45658780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 505 - 620
Target Start/End: Original strand, 32467910 - 32468025
Alignment:
Q  505 cctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 604  Q
    |||||||||| ||  |||||||||||||||  || ||||| ||||||| |||| ||||||| | |||||| ||| ||||||| |||||||||||||||||    
T  32467910 cctcactaaaccaacgcacaactttttgtcctacgtacaagttgtctacaatatcaaaatagttttttgttcacaaaaaatcatataagacaaaaaatta 32468009  T
Q  605 ttcaacatcataaaaa 620  Q
     |||| | ||||||||    
T  32468010 gtcaataccataaaaa 32468025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 24339671 - 24339830
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatc-actgcacaactttttgtcacacatacaaatt 547  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| | ||  ||||||||||| || ||| ||||| ||    
T  24339671 ttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaaccacaacacaactttttttcccacgtacaagtt 24339770  T
Q  548 gtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||     |||||| ||||| ||||||||| ||||||||||||||||    
T  24339771 gtctaaaataccaaaata--gcattgtcccccaaacatcgtataaaacaaaaaattattcaa 24339830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 51264602 - 51264476
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||| |||||||| ||||||   ||||||||   |||    
T  51264602 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttaaaatactaaaatagcattttgtcctttaaa 51264503  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  51264502 aatcgtataaaacaaaaaattactcaa 51264476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 637
Target Start/End: Original strand, 25343289 - 25343430
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||| |||||||| ||  | ||||||||||||| ||| ||||| ||||| ||||  |||||||| | ||| ||||  ||||||||| ||||  |    
T  25343289 atttttgtccttcactaaaccatagtacaactttttgtcgcacgtacaagttgtccaaaaatccaaaatagtatttcgtccctcaaaaatcgcataaagc 25343388  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||  ||||||||| ||||  ||||||||||    
T  25343389 aaaaaattattcaatgtcataaaaatttgtcttgtgttgttc 25343430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 49303434 - 49303546
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||| |||| ||| ||| |||||| ||||| ||  || ||||| ||||||||||||| |||||||  |||||||| ||||||||||||||| ||    
T  49303434 atttttgtccttcaccaaaccacagcacaattttttatcctacgtacaagttgtctaaaatactaaaataacattttgtcc-ccaaaaatcgtataaaac 49303532  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  49303533 aaaaaattactcaa 49303546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 50540438 - 50540325
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||| |||  ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   |||||||| ||||||||| ||||| ||    
T  50540438 atttttgtccttcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaatcatataaaac 50540339  T
Q  596 aaaaaattattcaa 609  Q
    || |||||| ||||    
T  50540338 aacaaattactcaa 50540325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 637
Target Start/End: Complemental strand, 15324226 - 15324110
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||| ||  |  ||||||||||||||| ||||||| |  |||||||| |||| ||||||||||||||||||||||| |  | |||||||     
T  15324226 cacaactttttgtctcaactgtaaattgtctaaaatatcaaaatagtaatttgtccatcaaacatcgtataagacaaaaaattatttattaccataaaag 15324127  T
Q  621 cttgtgatgtgttgttc 637  Q
    ||| | |||||||||||    
T  15324126 cttttcatgtgttgttc 15324110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 483 - 589
Target Start/End: Complemental strand, 46447771 - 46447665
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||| ||||||| | ||||  ||||| ||  |||||||||||||  ||| ||||| || ||||||||| ||||||| ||||||||||| ||||    
T  46447771 gacaaaaactaaaatttttattcctccttaaattacatcacaactttttgttccacgtacaagttatctaaaatatcaaaatagtcttttgtccatcaaa 46447672  T
Q  583 aatcgta 589  Q
    |||||||    
T  46447671 aatcgta 46447665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 633
Target Start/End: Original strand, 504459 - 504608
Alignment:
Q  484 acaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaa 583  Q
    |||||||||  || ||||||| ||||||||| ||   ||||| |||||||| |||||| || ||||||||||||||||| ||   |||||| ||||||||    
T  504459 acaaaaactgaaaattttgtctctcactaaaccataacacaattttttgtcccacatagaagttgtctaaaataccaaagtagctttttgttcaccaaaa 504558  T
Q  584 atcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgtt 633  Q
    |||||| | ||| ||||||| | ||| | |||||||| |||  |||||||    
T  504559 atcgtagaggactaaaaattgtccaataccataaaaatttgacatgtgtt 504608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 549 - 609
Target Start/End: Complemental strand, 4895434 - 4895374
Alignment:
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||| |||| ||||||||    
T  4895434 tctaaaatacaaaaataattttttgttcaccaaaaatcgtataagactaaaacttattcaa 4895374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 496 - 604
Target Start/End: Original strand, 42705318 - 42705426
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||| ||| ||| ||||| |||||| ||||  |||||||   |||||||| ||||||||| ||||| ||    
T  42705318 atttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctgaaatgtcaaaatagcattttgtcccccaaaaatcatataaaac 42705417  T
Q  596 aaaaaatta 604  Q
    |||||||||    
T  42705418 aaaaaatta 42705426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 29032547 - 29032612
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 606  Q
    ||||||||||||||||||  |||||||| ||||||||||| ||||| ||||||||||||||| ||||    
T  29032547 tacaaattgtctaaaataataaaataattttttgtccacc-aaaattgtataagacaaaaaactatt 29032612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 483 - 620
Target Start/End: Complemental strand, 31574461 - 31574323
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatctttt-gtccaccaa 581  Q
    ||||||||||| ||||| | || |||||||| ||||  | |||||| |||||  | |||||| |||| |||||||| |||||| | |||| ||| || ||    
T  31574461 gacaaaaactaaaatttgtatctctcactaattcacaacgcaacttattgtcctatatacaagttgtttaaaatacaaaaatagttttttagtctacaaa 31574362  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||| |||| |||||||||||||||| |||| |||||    
T  31574361 aaatcgcataaaacaaaaaattattcaatatcacaaaaa 31574323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 449 - 574
Target Start/End: Complemental strand, 7837274 - 7837149
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| |||| |||| |||   |||||||| |  | ||||||||| | || |||||||  |||||||||||||| |||| |||| |||    
T  7837274 ttcaggaacatgacaaactagaggcaagggacatgacaaaaattgaattttttgtccattaccaaatcacatcacaactttttgtctcacagacaagttg 7837175  T
Q  549 tctaaaataccaaaataatcttttgt 574  Q
    ||||||||| ||||||| | ||||||    
T  7837174 tctaaaatatcaaaatagtattttgt 7837149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 531 - 620
Target Start/End: Original strand, 20495006 - 20495095
Alignment:
Q  531 tgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||||| |||||| ||||||||||| ||||  |||||||||    
T  20495006 tgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatagtataaaacaaaaaattactcaatgtcataaaaa 20495095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 546 - 619
Target Start/End: Complemental strand, 49799421 - 49799348
Alignment:
Q  546 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    ||||||||||||||||||||  ||||||||||  |||||| | ||||||| ||| ||||||||| |||||||||    
T  49799421 ttgtctaaaataccaaaatagacttttgtccataaaaaattgaataagaccaaatattattcaatatcataaaa 49799348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 449 - 601
Target Start/End: Complemental strand, 5109869 - 5109718
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||    |||||||||||||| ||| |||  ||||||||||||||  |  ||||| |||    
T  5109869 ttcaggtacaagacaaattggaggcaagggacaggacaaaaactcatgtttttgtccctcaccaaaccacatcacaactttttgtccaaagtacaagttg 5109770  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 601  Q
    ||||||||  ||||||||  |||||||| |||||||| |||||| | ||||||    
T  5109769 tctaaaat-gcaaaataacattttgtcccccaaaaattgtataaaaaaaaaaa 5109718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 495 - 606
Target Start/End: Original strand, 16862491 - 16862602
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    ||||||||||| || | ||||||| ||||||||||||||   ||||| |  |||| |||||||  |||||||  |||||| || ||||||||||| ||||    
T  16862491 aatttttgtccttcgccaaatcaccgcacaactttttgtagtacatataggttgtttaaaataataaaataacattttgtacatcaaaaatcgtacaaga 16862590  T
Q  595 caaaaaattatt 606  Q
    | ||||||||||    
T  16862591 ccaaaaattatt 16862602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 483 - 574
Target Start/End: Complemental strand, 26733662 - 26733571
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgt 574  Q
    ||||||||||  |||| ||||||| ||||||| ||   |||||||||||| | ||  ||||| |||||||||||||||||||| ||||||||    
T  26733662 gacaaaaactgaaattcttgtcccccactaaaccataacacaactttttgcctcatgtacaagttgtctaaaataccaaaatagtcttttgt 26733571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 604
Target Start/End: Complemental strand, 34663996 - 34663913
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 604  Q
    |||||||||||| | ||| || ||||||||||||||| ||||||||  |||||||   |||||||| ||||| |||||||||||    
T  34663996 cacaactttttgacccacttataaattgtctaaaatatcaaaataacattttgtcactcaaaaatcatataaaacaaaaaatta 34663913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 609
Target Start/End: Original strand, 2761643 - 2761748
Alignment:
Q  503 tccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 602  Q
    |||||||||||| |||  ||||| |||||||| ||  |||||||| |||||||||| ||||||   |||||| || |||||||| ||||| || ||||||    
T  2761643 tccctcactaaaccacaacacaattttttgtctcaagtacaaattatctaaaatacaaaaatagatttttgt-caacaaaaatcatataaaaccaaaaat 2761741  T
Q  603 tattcaa 609  Q
    |||||||    
T  2761742 tattcaa 2761748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 637
Target Start/End: Original strand, 34283953 - 34284039
Alignment:
Q  551 taaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||| ||||||| |||||||||||  |||||||||| ||| |||||| |||||||| | |||||||  ||||  ||||||||||    
T  34283953 taaaatatcaaaatagtcttttgtccataaaaaatcgtacaaggcaaaaacttattcaataccataaaagtttgtcttgtgttgttc 34284039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 637
Target Start/End: Original strand, 32215347 - 32215444
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||| ||| |||||| ||||||||| | |||| |||||||||||||||||| | | ||| ||| ||||| |||||||||  |||  |||||||||||    
T  32215347 tacaagttgactaaaacaccaaaatagtgttttctccaccaaaaatcgtatatggctaaagattgttcaatatcataaaagtttgatatgtgttgttc 32215444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 569 - 625
Target Start/End: Complemental strand, 7836621 - 7836565
Alignment:
Q  569 ttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    |||||| | |||||| |||||||| |||||||||||||||| ||||||| |||||||    
T  7836621 ttttgtgccccaaaactcgtataaaacaaaaaattattcaatatcataataacttgt 7836565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 469 - 565
Target Start/End: Original strand, 38087049 - 38087145
Alignment:
Q  469 gatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 565  Q
    |||||||||||   ||||||||||   |||||||||| |||||||| |||  |||||||||||||| ||  ||||| ||||||||||  ||||||||    
T  38087049 gatgcaatggacatgacaaaaactcatatttttgtccttcactaaaccacatcacaactttttgtcccaagtacaagttgtctaaaaatccaaaata 38087145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 546 - 618
Target Start/End: Original strand, 47242645 - 47242716
Alignment:
Q  546 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaa 618  Q
    |||||||||||||||||||| |||||||| ||  |||||| ||||||||  ||||||||||||| ||| ||||    
T  47242645 ttgtctaaaataccaaaatagtcttttgtaca-taaaaattgtataagatcaaaaattattcaatatcgtaaa 47242716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 609
Target Start/End: Original strand, 51703268 - 51703355
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||| ||| ||||  ||||||||||||| |||||||  |||||||| |  ||||| |||||| ||||||||||| ||||    
T  51703268 cacaactttttgtcccacctacatgttgtctaaaatacaaaaataacattttgtcc-ctcaaaatggtataaaacaaaaaattactcaa 51703355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 601
Target Start/End: Original strand, 3414919 - 3415038
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| |||  ||  || || ||||| || ||| ||| | |||| |||||||||||||||   |||||||| ||||    
T  3414919 ggacaaaaactcatatttttgtccctcaccaaactacatcataattttttatcccacgtactagttgtttaaaataccaaaatagcattttgtcccccaa 3415018  T
Q  582 aaatcgtataagacaaaaaa 601  Q
    ||||| ||||| ||||||||    
T  3415019 aaatcatataaaacaaaaaa 3415038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 565
Target Start/End: Original strand, 16643272 - 16643331
Alignment:
Q  506 ctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 565  Q
    ||||| |||||||  |||||||||||||| ||||||||  ||||||||||||| ||||||    
T  16643272 ctcaccaaatcacgacacaactttttgtcccacatacaggttgtctaaaatacaaaaata 16643331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 598
Target Start/End: Complemental strand, 39792902 - 39792800
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    |||| |||||| |||| ||| |||  |||||||| ||||  ||| ||||||||||||||||||  ||||||| | ||| || ||||||||| ||||||||    
T  39792902 aattcttgtccttcaccaaaccacaacacaacttgttgtttcacgtacaaattgtctaaaataataaaataa-catttatcaaccaaaaattgtataaga 39792804  T
Q  595 caaa 598  Q
    ||||    
T  39792803 caaa 39792800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 609
Target Start/End: Original strand, 43310377 - 43310466
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac--aaaaaattattcaa 609  Q
    ||||||||||| || |||||||||||||| ||||||| ||||||| | |||||| ||  ||||||  ||||||||  ||||||||||||||    
T  43310377 cacaactttttatctcacatacaaattgtttaaaatatcaaaatagttttttgtaca-taaaaattatataagactaaaaaaattattcaa 43310466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 779 - 822
Target Start/End: Original strand, 44402555 - 44402598
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    |||||||||||||  |||||||||||| ||||||||||||||||    
T  44402555 cacatgtgattgcaatcaaataattcagtttctcaaattattac 44402598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 620
Target Start/End: Complemental strand, 40856216 - 40856111
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaatac------caaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatca 614  Q
    |||||||||||||| |||||| ||||| ||||||||||       |||||||| |||| ||||  |||||| ||||||||| |||||| |||||| || |    
T  40856216 cacaactttttgtctcacatataaattatctaaaatacaaaaataaaaataattttttatccataaaaaattgtataagaccaaaaataattcaatatga 40856117  T
Q  615 taaaaa 620  Q
    ||||||    
T  40856116 taaaaa 40856111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 540 - 601
Target Start/End: Complemental strand, 30105041 - 30104980
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 601  Q
    ||||| |||||||||||||||||||||  |||||| | | ||| ||||| ||||||||||||    
T  30105041 tacaagttgtctaaaataccaaaataacattttgttcgctaaatatcgtttaagacaaaaaa 30104980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 566
Target Start/End: Complemental strand, 40610791 - 40610746
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataa 566  Q
    ||||||||||| ||||| ||| || |||||||||||||||||||||    
T  40610791 cacaactttttatcacatatataagttgtctaaaataccaaaataa 40610746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 584
Target Start/End: Original strand, 46815816 - 46815897
Alignment:
Q  503 tccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaa 584  Q
    |||||||||||| ||   |||||| |||| || ||| ||| | |||||||||||||||||||||  |||||||| |||||||    
T  46815816 tccctcactaaaccatatcacaaccttttttcccacgtactagttgtctaaaataccaaaataacattttgtccgccaaaaa 46815897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 19101 - 19214
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||||||||||||| ||    
T  19101 atttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccttcaaaaatcgtataaaac 19200  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  19201 aaaaaattactcaa 19214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 4e-31; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 456 - 609
Target Start/End: Original strand, 5968844 - 5968997
Alignment:
Q  456 acatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaa 555  Q
    |||||||||| |||| |||| |||  |||||||||||   |||||||||| |||| ||| ||| |||||||||||| || ||| ||||||||||||||||    
T  5968844 acatgacaaactagaggcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaa 5968943  T
Q  556 taccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||  ||||||||  |||||||||||||| ||||||||||| ||||    
T  5968944 taccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 5968997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 30542995 - 30543155
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| | || ||||||||  |||||||||||   ||||||||||||||| ||| |||  |||||||||| ||| ||| ||||| |||    
T  30542995 ttcaggtacatgacaaactggaggcaatggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttg 30543094  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| ||| ||||||| ||||    
T  30543095 tctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaa 30543155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 455 - 625
Target Start/End: Original strand, 10656665 - 10656835
Alignment:
Q  455 gacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaa 554  Q
    ||||||||||| |||| ||||  ||  |||||||||||  | ||||||||| |||| ||| |||  |||||||||||||| ||| |||||||||||||||    
T  10656665 gacatgacaaactagaggcaaaagacaggacaaaaactgaattttttgtccttcacaaaaccacaacacaactttttgtctcacgtacaaattgtctaaa 10656764  T
Q  555 ataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||| ||||||||   ||||||||| ||||||||||||| | |||||||||||||| | |||||||| ||||    
T  10656765 atatcaaaataacaatttgtccacaaaaaatcgtataaaagaaaaaattattcaataacataaaaatttgt 10656835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 449 - 637
Target Start/End: Original strand, 29563199 - 29563388
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  29563199 ttcaggtacaggacaaactcgaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 29563298  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||||| | ||||||||  |||||||||||||| ||||||||||| ||||   ||| ||||| |||| |||||||||||    
T  29563299 tctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 29563388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 34063260 - 34063100
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||| | ||| ||| ||||||||||||||| ||| ||||| |||    
T  34063260 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttg 34063161  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||||||||    
T  34063160 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 34063100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 449 - 599
Target Start/End: Complemental strand, 4052612 - 4052462
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  4052612 ttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 4052513  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaa 599  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||    
T  4052512 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaa 4052462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 12753332 - 12753458
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||| |||||| ||| |||  |||||||||||||| ||||||||| |||||||||||||||||||||  |||||||| |||||    
T  12753332 gacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaataacattttgtcccccaaa 12753431  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| |||| |||||| ||||    
T  12753432 aatcgtataaaacaacaaattactcaa 12753458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 31732162 - 31732036
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| ||| | ||||||||||||| ||||||||| ||||||||||||||||||||   ||||||||  ||||    
T  31732162 gacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtctaaaataccaaaatagcattttgtccctcaaa 31732063  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  31732062 aatcgtataaaacaaaaaattactcaa 31732036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 8673028 - 8673188
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  8673028 ttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 8673127  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||| ||||| ||||||||||| ||||    
T  8673128 tctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaa 8673188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 29672296 - 29672456
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||     
T  29672296 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagtta 29672395  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  29672396 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 29672456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 32019974 - 32020134
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| || | |||||||||||   |||||| |||||||| ||| ||| ||||||||||||||  ||| ||||| |||    
T  32019974 ttcaggtacaggacaaactggaagcaaggggtaggacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgttccacgtacaagttg 32020073  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||| | ||||||||  |||||||||||||| ||||||||||| ||||    
T  32020074 tctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 32020134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 521 - 625
Target Start/End: Complemental strand, 41548678 - 41548574
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||| ||| ||||| |||||||||||| ||||||||  |||||||| ||||||||||||||| ||||||||||||||||  |||||||||    
T  41548678 cacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaa 41548579  T
Q  621 cttgt 625  Q
     ||||    
T  41548578 tttgt 41548574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 468 - 636
Target Start/End: Complemental strand, 45114168 - 45114000
Alignment:
Q  468 agatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataat 567  Q
    |||||||| |||  |||||||||||   ||||||||||||||| ||| ||| | |||||||||||||| |  ||||| ||||||||||||||||||||      
T  45114168 agatgcaagggagaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcataggtacaagttgtctaaaataccaaaatagc 45114069  T
Q  568 cttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
     ||| |||| ||||||||||||||| ||| ||||||||||||  ||||| ||| || | ||||||||||    
T  45114068 atttcgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaatttatcatgtgttgtt 45114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 6386675 - 6386548
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  6386675 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 6386576  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  6386575 aaatcgtataaaacaaaaaattactcaa 6386548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 604
Target Start/End: Original strand, 7394787 - 7394942
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| |||| |||| |||   ||||||||||   ||||||||||||||| ||| ||   |||||||||||||| ||| ||||| |||    
T  7394787 ttcaggtacatgacaaactagaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtctcacgtacaagttg 7394886  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 604  Q
    ||||||||||||||||||  ||||||||  ||||||||| |||| |||||||||||    
T  7394887 tctaaaataccaaaataacattttgtccttcaaaaatcgcataaaacaaaaaatta 7394942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 482 - 625
Target Start/End: Original strand, 7591453 - 7591596
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||||| |||||  ||| |||  |||||||||||||||||| || || |||||||||||| |||||||   |||||||| ||||    
T  7591453 ggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcacacgtataagttgtctaaaatatcaaaatagcattttgtcccccaa 7591552  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||||    
T  7591553 aaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 7591596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 620
Target Start/End: Complemental strand, 15001598 - 15001428
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||||||| |||||| | || ||||| ||  | |||||||||  |||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||     
T  15001598 ttcagggacaggacaaactggaggcaatagacagaacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagtta 15001499  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||||| | | ||||||| ||||||||| ||||| ||| |||||||||||| | ||||||||    
T  15001498 tctaaaataccaaaat-agcatttgtcccccaaaaatcatataaaacagaaaattattcaataccataaaaa 15001428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 27104057 - 27103931
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| ||||||||||||||||||| ||| ||||| |||||||||||| |||||||   ||||||||  ||||    
T  27104057 gacaaaaactcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaa 27103958  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||| ||||| ||||||||||| ||||    
T  27103957 aatcatataaaacaaaaaattactcaa 27103931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 483 - 620
Target Start/End: Original strand, 14005051 - 14005188
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||||| |||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||||  |||||||||  |||    
T  14005051 gacaaaaactcatatttttgtccatcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccataaaa 14005150  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||| |||||| ||||||||||| ||||  |||||||||    
T  14005151 aattgtataaaacaaaaaattactcaatgtcataaaaa 14005188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 25478328 - 25478215
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||  ||||||| |||||||||||||||  || ||||| |||||||||||||||||||| | ||||||||   ||||||||||||| ||    
T  25478328 atttttgtccctcatcaaatcacagcacaactttttgtcctacgtacaagttgtctaaaataccaaaatagtattttgtccctaaaaaatcgtataaaac 25478229  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  25478228 aaaaaattactcaa 25478215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 496 - 625
Target Start/End: Complemental strand, 30501230 - 30501101
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||| ||||||||| |||||||  ||| |  | ||||||||||||||| ||    
T  30501230 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaac 30501131  T
Q  596 aaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||||||||  ||||||||| ||||    
T  30501130 aaaaaattattcaatgtcataaaaatttgt 30501101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 449 - 637
Target Start/End: Original strand, 31513556 - 31513745
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| | |||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| |||||||||||||||  |  ||||| |||    
T  31513556 ttcaggtagatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcctaggtacaagttg 31513655  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||   ||| ||||| |||| |||||||||||    
T  31513656 tctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 31513745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 45446540 - 45446427
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||| |||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  45446540 atttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 45446441  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  45446440 aaaaaattactcaa 45446427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 637
Target Start/End: Complemental strand, 35225794 - 35225606
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||||||| |||||| | || |||| |||  |||||||||||  |||||||||||||| | ||| |||  |||||||||||||||||  ||||| |||    
T  35225794 ttcagggacaggacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtcacaagtacaagttg 35225695  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |||||||||| ||||||   ||| |||  ||||||||| ||||| |||  ||||||||||| | |||||||| ||||  ||||||||||    
T  35225694 tctaaaatacaaaaatagcatttcgtcacccaaaaatcatataaaacaggaaattattcaataccataaaaatttgtcttgtgttgttc 35225606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 37618365 - 37618525
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  37618365 ttcaggtacaggacaaattggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttg 37618464  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    | | |||||||||||||   ||| |||| |||||||| |||||| ||||||||||||||||    
T  37618465 ttttaaataccaaaatagcatttcgtcccccaaaaattgtataaaacaaaaaattattcaa 37618525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 37664256 - 37664416
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  37664256 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttg 37664355  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   |||||||   |||||||| ||||| ||||||||||| ||||    
T  37664356 tctaaaataccaaaatagcattttgtcgctcaaaaatcatataaaacaaaaaattactcaa 37664416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 522 - 609
Target Start/End: Complemental strand, 10531337 - 10531250
Alignment:
Q  522 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| || |||||||||||||| || ||||||||||||||||||||||||  ||||||| ||||||| ||||||||||||||    
T  10531337 acaactttttatctcacatacaaattgtttagaataccaaaataatcttttgtccataaaaaatcttataagataaaaaattattcaa 10531250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 16595155 - 16595282
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    ||||||||||  ||| ||||||||||| ||||  |||  |||||||||||||| ||| ||||| || |||||||||| ||||||   |||||| ||||||    
T  16595155 ggacaaaaacatgaagttttgtccctcgctaatccacaacacaactttttgtcccacgtacaagttatctaaaatacaaaaatagctttttgttcaccaa 16595254  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||| |||||||||||||    
T  16595255 aaatcgtataagaccaaaaattattcaa 16595282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 32303591 - 32303718
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  32303591 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 32303690  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||| ||||| ||||||||||| ||||    
T  32303691 aaatcatataaaacaaaaaattactcaa 32303718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 41709876 - 41709749
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| |||||||||||||||  || ||||| || |||||||||||||||||   ||||||||  |||    
T  41709876 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtccaacgtacaagttatctaaaataccaaaatagcattttgtccctcaa 41709777  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  41709776 aaatcgtataaaacaaaaaattactcaa 41709749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 625
Target Start/End: Complemental strand, 10467162 - 10467020
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||| |||||  ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| |||||    
T  10467162 gacaaaaactgatatttttgttcctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaa 10467063  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    |||||||||| |||||||||||||| |  ||||||||| ||||    
T  10467062 aatcgtataaaacaaaaaattattctatgtcataaaaatttgt 10467020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 3251676 - 3251789
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||||||||| ||  || ||||| |||||||||||||||||||||  ||||||||  |||||||||||||| ||    
T  3251676 atttttgtccctcaccaaaccacatcacaactttttatcctacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaac 3251775  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  3251776 aaaaaattactcaa 3251789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 13406955 - 13407068
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| ||| || |||||||| ||| ||||| ||||||||||||||||||||   |||||| | ||||||||||||||| ||    
T  13406955 atttttgtccctcaccaaaccacagcataattttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtgccccaaaaatcgtataaaac 13407054  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  13407055 aaaaaattactcaa 13407068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 495 - 619
Target Start/End: Complemental strand, 54256 - 54133
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    ||||||||||| |  ||||| |||  |||||||||||||| ||||||||| || || ||||||| |||||||| |||| ||||| ||||||||| |||||    
T  54256 aatttttgtcctttgctaaaccacatcacaactttttgtcccacatacaagttatcgaaaatac-aaaataatattttatccacaaaaaatcgtttaaga 54158  T
Q  595 caaaaaattattcaacatcataaaa 619  Q
    ||||||||||||||| | |||||||    
T  54157 caaaaaattattcaataccataaaa 54133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 482 - 625
Target Start/End: Complemental strand, 22999357 - 22999213
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgtccacca 580  Q
    |||||||||||   ||||||||||||||  ||| ||  ||| |||||||| ||| ||| ||||| |||||||||||| |||||||   |||||||| |||    
T  22999357 ggacaaaaactgatatttttgtccctcagcaaaccatagcaaaacttttttgtcccacgtacaacttgtctaaaatatcaaaatagcattttgtcctcca 22999258  T
Q  581 aaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    |||||||||||| ||||||||||||||||  ||||||||| ||||    
T  22999257 aaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 22999213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 636
Target Start/End: Original strand, 29611028 - 29611215
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||  ||||| | || |||| |||  |||||||||||  |||||||||||||| | ||| |||  |||||||||||||| ||| || || |||    
T  29611028 ttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcgccaaaccacaacacaactttttgtcccacgtaaaagttg 29611127  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    ||||||| |||||||||   ||| |||| ||||||| | ||||| |||| ||||||||||| | |||||||| ||||  |||||||||    
T  29611128 tctaaaacaccaaaatagcatttcgtcccccaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgttgtt 29611215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 483 - 604
Target Start/End: Complemental strand, 17805789 - 17805667
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcc-accaa 581  Q
    ||||||||||   |||||||| |||||| ||| ||  |||||||| |||||| ||| ||||| |||||||||||||||||||||  ||||||||  ||||    
T  17805789 gacaaaaactcatatttttgttcctcaccaaaccaaagcacaactctttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcctcccaa 17805690  T
Q  582 aaatcgtataagacaaaaaatta 604  Q
    ||||||||||| |||||||||||    
T  17805689 aaatcgtataaaacaaaaaatta 17805667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 584
Target Start/End: Original strand, 36426254 - 36426355
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||| || |||||||  | |||||| |||  |||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |||    
T  36426254 gacaaaaactaaaaattttgtcatttactaaaccacaacacatctttttgtctcacatacaagttgtctaaaataccaaaatagtcttttgtccacaaaa 36426353  T
Q  583 aa 584  Q
    ||    
T  36426354 aa 36426355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 496 - 625
Target Start/End: Complemental strand, 39642968 - 39642839
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||||||| |||| ||| ||||  ||||||||||||||||||||   |||  ||| |||||||| |||||| ||    
T  39642968 atttttgtccctcaccaaaccacaacacaactttctgtcccacgtacaggttgtctaaaataccaaaatagcatttcatcccccaaaaattgtataaaac 39642869  T
Q  596 aaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||||||||  ||||||||| ||||    
T  39642868 aaaaaattattcaatgtcataaaaatttgt 39642839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 521 - 633
Target Start/End: Complemental strand, 15351795 - 15351684
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||  |||| || |||||||||||||||| |   |||||||||||| ||||||||||    
T  15351795 cacaactttttgtctcagttacaaattgtctaaaataccaaaataacattttatcaaccaaaaatcgtataa-aatcaaaattattcaatatcataaaaa 15351697  T
Q  621 cttgtgatgtgtt 633  Q
     || | |||||||    
T  15351696 tttatcatgtgtt 15351684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 625
Target Start/End: Original strand, 16485782 - 16485958
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||||||||||||||||  | |||| |||  | |||||||||  |||||||||||||| | ||| ||| |||||||||||||||  || || || ||     
T  16485782 ttcagggacatgacaaattgaaggcaaaggacagaacaaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtataagttt 16485881  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    |||||||||| ||||||   ||| |||  ||||||||| ||||| ||| |||||||||||| | |||||||| ||||    
T  16485882 tctaaaatacaaaaatagcatttcgtcacccaaaaatcatataatacagaaaattattcaataccataaaaatttgt 16485958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 496 - 620
Target Start/End: Complemental strand, 34101593 - 34101469
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  || |||||||| |  ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  34101593 atttttgtccctcaccaaaccacaacataacttttttttccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 34101494  T
Q  596 aaaaaattattcaacatcataaaaa 620  Q
    ||||||||| |||||  ||||||||    
T  34101493 aaaaaattactcaacgccataaaaa 34101469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 40389172 - 40389012
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||| || ||||| ||| ||| ||||||||||||||| ||||||||| |||    
T  40389172 ttcaggtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttatctctcaccaaaccacagcacaactttttgtcccacatacaagttg 40389073  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    | | |||| ||||||||   ||| |||| ||||||||||||||| | ||||||||||||||    
T  40389072 ttttaaatgccaaaatagcatttcgtcccccaaaaatcgtataaaataaaaaattattcaa 40389012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 498 - 609
Target Start/End: Complemental strand, 10932819 - 10932708
Alignment:
Q  498 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 597  Q
    ||||||||||||||||| |||  |||||||||| ||  ||| ||||| |||||||||||||||||||| |||||||||||  |||  |  |||||||| |    
T  10932819 ttttgtccctcactaaaccacatcacaacttttagttccacgtacaatttgtctaaaataccaaaatagtcttttgtccataaaattttttataagacca 10932720  T
Q  598 aaaattattcaa 609  Q
    ||||||||||||    
T  10932719 aaaattattcaa 10932708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 503 - 620
Target Start/End: Original strand, 10320304 - 10320421
Alignment:
Q  503 tccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 602  Q
    |||||||| ||| |||  |||||||||||  ||||| ||||| |||||||||||| ||||||||  ||||||| | ||| |||||||||| || ||||||    
T  10320304 tccctcaccaaaccacaacacaactttttaccacacgtacaagttgtctaaaatatcaaaataacattttgtctaacaacaatcgtataaaaccaaaaat 10320403  T
Q  603 tattcaacatcataaaaa 620  Q
    ||||||| | ||||||||    
T  10320404 tattcaataccataaaaa 10320421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 499 - 625
Target Start/End: Complemental strand, 6460344 - 6460219
Alignment:
Q  499 tttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 597  Q
    |||||| ||||| ||| |||  ||||||||||| ||| ||| || || |||||||||||||||||||||  |||||||||  ||||||||||||||||      
T  6460344 tttgtctctcaccaaaccacatcacaacttttttgtcccacgtataagttgtctaaaataccaaaataacattttgtccataaaaaatcgtataagac-- 6460247  T
Q  598 aaaattattcaacatcataaaaacttgt 625  Q
    |||||||||||| | |||||||| ||||    
T  6460246 aaaattattcaataccataaaaatttgt 6460219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 482 - 565
Target Start/End: Complemental strand, 21272783 - 21272700
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 565  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||| ||||||    
T  21272783 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaata 21272700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 601
Target Start/End: Original strand, 27109561 - 27109666
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||| ||| || ||| |||  |||||||||||||| | | |||||||||| ||||||||||||||||  ||| |||| ||||||||| ||||| ||    
T  27109561 atttttgttccttaccaaaccacaacacaactttttgtcccgcgtacaaattgtttaaaataccaaaataacatttcgtcccccaaaaatcatataaaac 27109660  T
Q  596 aaaaaa 601  Q
    ||||||    
T  27109661 aaaaaa 27109666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 508 - 619
Target Start/End: Complemental strand, 14959031 - 14958921
Alignment:
Q  508 cactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattc 607  Q
    ||||||| |||  |||||||||||||| ||| ||||| | |||||||||| ||||||||  ||||| |||| |||||||||||||||  |||||| |||     
T  14959031 cactaaaccacaacacaactttttgtcccacgtacaagt-gtctaaaatatcaaaataactttttgcccacaaaaaatcgtataagatcaaaaatgattt 14958933  T
Q  608 aacatcataaaa 619  Q
    || |||||||||    
T  14958932 aatatcataaaa 14958921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 524 - 602
Target Start/End: Original strand, 11926878 - 11926956
Alignment:
Q  524 aactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 602  Q
    ||||||||||| ||  ||||| |||||||||||||||||||| |||||||| |  ||||||| ||||||||| ||||||    
T  11926878 aactttttgtctcatgtacaatttgtctaaaataccaaaatagtcttttgtgcctcaaaaattgtataagactaaaaat 11926956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 551 - 620
Target Start/End: Complemental strand, 28746353 - 28746284
Alignment:
Q  551 taaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||||||||||||||  |||||| |||||||||||||| ||||  |||||||||||||  |||||||||    
T  28746353 taaaataccaaaataaaattttgttcaccaaaaatcgtacaagatcaaaaattattcaatgtcataaaaa 28746284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 602
Target Start/End: Complemental strand, 11944934 - 11944854
Alignment:
Q  522 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 602  Q
    ||||||||||||| ||  ||||| |||||||||||||||||||| |||||| | |  ||||||| ||||||||| ||||||    
T  11944934 acaactttttgtctcatgtacaatttgtctaaaataccaaaatagtcttttttgcctcaaaaattgtataagactaaaaat 11944854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 636
Target Start/End: Complemental strand, 37474760 - 37474664
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    ||||| ||||||||||||||||| ||   |||| | | ||||||||||||||| | ||||||||||||||  ||||||||| |||| ||||| ||||    
T  37474760 tacaagttgtctaaaataccaaactagcgtttttttccccaaaaatcgtataaaataaaaaattattcaatgtcataaaaatttgtcatgtgctgtt 37474664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 522 - 609
Target Start/End: Original strand, 5859518 - 5859605
Alignment:
Q  522 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||| || ||||| || |||||||||| |||||| | |||||||||  ||||||| |||||||| || ||||| ||||    
T  5859518 acaactttttgtcatacgtacaagttatctaaaatactaaaatagtattttgtccataaaaaatcttataagaccaataattaatcaa 5859605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 601
Target Start/End: Complemental strand, 17520678 - 17520583
Alignment:
Q  498 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 597  Q
    ||||||||||||| ||| |||  |||||||||||||| ||||||||| ||||| |||||| ||        |||||||| ||||||||||||||| ||||    
T  17520678 ttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtccaaaatagca--------ttttgtcccccaaaaatcgtataaaacaa 17520587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 599
Target Start/End: Original strand, 3361789 - 3361866
Alignment:
Q  522 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaa 599  Q
    |||||||||| || ||  ||||| ||||||||  |||||||||||  ||||||||||| || ||||||||||||||||    
T  3361789 acaactttttctctcaagtacaagttgtctaatctaccaaaataacattttgtccacccaacatcgtataagacaaaa 3361866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 609
Target Start/End: Original strand, 18297444 - 18297498
Alignment:
Q  553 aaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||  ||||| ||| |||||||||||||||| |||||||||||||    
T  18297444 aaataccaaaataat--tttgttcacaaaaaatcgtataagaccaaaaattattcaa 18297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 540 - 599
Target Start/End: Complemental strand, 3394369 - 3394309
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatctttt-gtccaccaaaaatcgtataagacaaaa 599  Q
    ||||| ||||||||| |||||||||||  |||| |||||||||| ||||||||||||||||    
T  3394369 tacaagttgtctaaattaccaaaataacatttttgtccaccaaacatcgtataagacaaaa 3394309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 779 - 822
Target Start/End: Complemental strand, 1592080 - 1592037
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||    
T  1592080 cacatgtgattgcattcaaataatatattttctcaaattattac 1592037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 589
Target Start/End: Original strand, 7722261 - 7722344
Alignment:
Q  506 ctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgta 589  Q
    |||||||||||||   |||||||||||| | |  || |||||||  |||||| |||||||||||||||||||| ||| ||||||    
T  7722261 ctcactaaatcacattacaactttttgttaaaattataaattgttaaaaatatcaaaataatcttttgtccacaaaacatcgta 7722344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 609
Target Start/End: Complemental strand, 14012375 - 14012316
Alignment:
Q  550 ctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||| ||||||||  |||| |||||| ||||||||  |||||||||    
T  14012375 ctaaaataccaaaataattttttgtccttcaaacatcgtacaagacaaaccattattcaa 14012316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 5892128 - 5892074
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtc 575  Q
    |||||||||||||||||| || || ||||||||| ||||||| |||| |||||||    
T  5892128 cacaactttttgtcacacgtataagttgtctaaattaccaaattaattttttgtc 5892074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 637
Target Start/End: Complemental strand, 9624239 - 9624181
Alignment:
Q  580 aaaaatcgtataagacaaaaaa-ttattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |||||| ||||||||||||||| |||||||| | |||||||| |||| |||||||||||    
T  9624239 aaaaattgtataagacaaaaaaattattcaataccataaaaatttgtcatgtgttgttc 9624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 495 - 585
Target Start/End: Original strand, 22756430 - 22756520
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 585  Q
    ||||||| ||||||| || | |||  |||||||||||||  ||| ||||| || |||||||||| |||||| | |||| ||||||||||||    
T  22756430 aatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccaccaaaaat 22756520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 793 - 822
Target Start/End: Complemental strand, 16824423 - 16824394
Alignment:
Q  793 ttcaaataattcattttctcaaattattac 822  Q
    ||||||||||||||||||||||||||||||    
T  16824423 ttcaaataattcattttctcaaattattac 16824394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 637
Target Start/End: Complemental strand, 38260920 - 38260805
Alignment:
Q  523 caactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga--caaaaaattattcaacatcataaaaa 620  Q
    |||||||||||| |||||| || | |||||||||||||||||| ||||||  | ||||||| | ||||||||   ||||||| |||| ||| |||||||     
T  38260920 caactttttgtcccacatataagt-gtctaaaataccaaaatagtcttttacctaccaaaatttgtataagaacaaaaaaataattcgacaccataaaag 38260822  T
Q  621 cttgtgatgtgttgttc 637  Q
     ||||  ||||||||||    
T  38260821 tttgttttgtgttgttc 38260805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 4e-31; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 483 - 636
Target Start/End: Complemental strand, 48445623 - 48445470
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  ||||||||||| |||| ||||||| | ||||||||||||| | ||||||| |||||||||| || |||||||  |||||||| |||||    
T  48445623 gacaaaaactgaaatttttgtccttcaccaaatcacaggacaactttttgtctcgcatacaagttgtctaaaacacgaaaataacattttgtcccccaaa 48445524  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    |||| ||||| |||| ||||||||||| | |||||||| |||| ||||||||||    
T  48445523 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgtt 48445470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 521 - 637
Target Start/End: Original strand, 15035284 - 15035400
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||  ||||| ||||||||||||||| || |||||||||||||||| | ||||||||    
T  15035284 cacaactttttgtaccacatacaaattgtctaaaatatcaaaataacattttgcccaccaaaaatcgtacaaaacaaaaaattattcaataccataaaaa 15035383  T
Q  621 cttgtgatgtgttgttc 637  Q
     |||| |||||||||||    
T  15035384 tttgtcatgtgttgttc 15035400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 26371768 - 26371928
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||| ||||| |||    
T  26371768 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttg 26371867  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||   ||||||||  |||||||||||||| ||||||||||||||||    
T  26371868 tctaaaatactaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 26371928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 40753291 - 40753131
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||| ||||| |||    
T  40753291 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttg 40753192  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  40753191 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 40753131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 449 - 604
Target Start/End: Complemental strand, 44748831 - 44748676
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| |||| |||| |||  | |||||||||  |||||||||||||||| ||| |||   ||||||||||||| ||| ||||| |||    
T  44748831 ttcaggtacatgacaaactagaggcaagggacagaacaaaaactcaaatttttgtccctcaccaaaccacaatacaactttttgtcccacgtacaagttg 44748732  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 604  Q
    |||||||||||||||||   |||||||| ||||||||||||||| |||||||||||    
T  44748731 tctaaaataccaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaatta 44748676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 496 - 637
Target Start/End: Complemental strand, 18386614 - 18386472
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  18386614 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 18386515  T
Q  596 aaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    ||||||||| ||||  |||| ||||| |||| |||||||||||    
T  18386514 aaaaaattactcaatgtcataaaaaatttgtcatgtgttgttc 18386472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 496 - 625
Target Start/End: Complemental strand, 26652955 - 26652826
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||||||||||||| ||    
T  26652955 atttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccgccaaaaatcgtataaaac 26652856  T
Q  596 aaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||||||||  ||||||||| ||||    
T  26652855 aaaaaattattcaatgtcataaaaatttgt 26652826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 11321844 - 11322004
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  11321844 ttcaggtacaggacaaactggaggcaacggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 11321943  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  11321944 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 11322004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 36769528 - 36769688
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  36769528 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 36769627  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   |||||||   |||||||||||||| ||||||||||| ||||    
T  36769628 tctaaaataccaaaatagcattttgtctctcaaaaatcgtataaaacaaaaaattactcaa 36769688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 30849238 - 30849365
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| || |||||| |||| ||||||||||||||||  |||||||| ||||    
T  30849238 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatatacaagttgtataaaataccaaaataacattttgtcccccaa 30849337  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  30849338 aaatcgtataaaacaaaaaattactcaa 30849365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 483 - 625
Target Start/End: Original strand, 34295397 - 34295539
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| |||||    
T  34295397 gacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaa 34295496  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    |||| ||||| ||||||||||||||||  ||||||||| ||||    
T  34295497 aatcatataaaacaaaaaattattcaatgtcataaaaatttgt 34295539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 47953292 - 47953166
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  47953292 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 47953193  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  47953192 aatcgtataaaacaaaaaattactcaa 47953166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 21785007 - 21784847
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| | || ||||  ||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  21785007 ttcaggcacatgacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 21784908  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   |||||||| ||||||||||||||| ||| ||||||| ||||    
T  21784907 tctaaaataccaaaatagcattttgtcctccaaaaatcgtataaaacataaaattactcaa 21784847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 26994184 - 26994344
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| | || |||| |||  |||||||| ||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  26994184 ttcaggtacatgacaaactggaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 26994283  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||   ||||||||||||| ||||||||||| ||||    
T  26994284 tctaaaataccaaaatagcattttgtccctaaaaaatcgtataaaacaaaaaattactcaa 26994344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 29661459 - 29661299
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| |||||||||||| || ||| ||||| ||     
T  29661459 ttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaagtta 29661360  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  29661359 tctaaaataccaaaatagcattttgtcccacaaaaatcgtataaaacaaaaaattactcaa 29661299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 483 - 630
Target Start/End: Complemental strand, 329572 - 329425
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  |||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||| |||||| |||||||||   |||||||| |||||    
T  329572 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgcctaaaacaccaaaatagcattttgtcccccaaa 329473  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgt 630  Q
    |||| ||||| |||| ||||||||||| | |||||||| |||| ||||    
T  329472 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 329425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 46633799 - 46633673
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||| |||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  46633799 gacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 46633700  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  46633699 aatcgtataaaacaaaaaattactcaa 46633673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 496 - 637
Target Start/End: Original strand, 23349297 - 23349438
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||||||||| ||||||||||||| ||||| |  ||| |||| |||| ||||||| || ||    
T  23349297 atttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatactaaaatgacatttcgtcccccaacaatcgtagaaaac 23349396  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||  | ||||||| |||| ||||| |||||    
T  23349397 aaaaaattattcaatgttataaaaatttgtcatgtgctgttc 23349438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 10932516 - 10932676
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| |||  ||  |||||||||||||| ||| ||||| |||    
T  10932516 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttg 10932615  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  10932616 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 10932676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 524 - 616
Target Start/End: Original strand, 29992729 - 29992820
Alignment:
Q  524 aactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcata 616  Q
    ||||||||||| ||| ||||| || |||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  29992729 aactttttgtctcacgtacaagttatctaaaatac-aaaataattttttgtccaccaaaaatcgtataagaccaaaaattattcaaaatcata 29992820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 47316657 - 47316817
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||||| ||| |||    
T  47316657 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacatgcaagttg 47316756  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||| ||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  47316757 tctaaattaccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 47316817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 18470787 - 18470660
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||| ||||| ||| ||| ||| ||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||    
T  18470787 ggacaaaaactcatatttttgtctctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaa 18470688  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||| ||||| ||||||||||| ||||    
T  18470687 aaatcatataaaacaaaaaattactcaa 18470660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 41211159 - 41211320
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  41211159 ttcaggtacaagacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 41211258  T
Q  549 tctaaaataccaaaata--atcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||  || |||| |||   ||||||||||||| ||||||||||| ||||    
T  41211259 tctaaaataccaaaatagcat-ttttatccctaaaaaatcgtataaaacaaaaaattactcaa 41211320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 496 - 637
Target Start/End: Original strand, 30599014 - 30599156
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||  ||| |||  |||||||||||||| ||  |||||||| ||||||||||||||||||  |||||||| | ||||||||||||| ||    
T  30599014 atttttgtccctcatcaaaccacaacacaactttttgtctcaagtacaaattatctaaaataccaaaataacattttgtcccctaaaaatcgtataaaac 30599113  T
Q  596 aaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    || |||||| ||||  |||| ||||| |||| |||||||||||    
T  30599114 aacaaattactcaatttcataaaaaatttgtcatgtgttgttc 30599156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 482 - 620
Target Start/End: Complemental strand, 38301445 - 38301308
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| |||  |||| |||||||||||| ||||||||  |||||||| ||||    
T  38301445 ggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacg-acaagttgtctaaaatatcaaaataacattttgtcccccaa 38301347  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||||||| | ||||||||||||||||  |||||||||    
T  38301346 aaatcgtattaaacaaaaaattattcaatgtcataaaaa 38301308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 625
Target Start/End: Complemental strand, 48699500 - 48699358
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  |||| ||||||||||||||| |||  ||||||| |||||  ||| ||||| ||||||||||||||||||||  ||| ||||||| |||    
T  48699500 gacaaaaactgaaattcttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaataccaaaatagacttatgtccacaaaa 48699401  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||| ||||| |||| | |||||| | ||||||| |||||    
T  48699400 aatcgtacaagaccaaaagtcattcaataccataaaagcttgt 48699358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 483 - 619
Target Start/End: Original strand, 29372772 - 29372908
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||| ||||||||||| |||||||| |||  ||||||||| |||  ||  ||||| |||||||||||  |||| ||| ||||| |||||||||    
T  29372772 gacaaaaactaaaatttttgtccgtcactaaaccacaacacaactttctgttccatgtacaagttgtctaaaatttcaaattaaccttttatccaccaaa 29372871  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||| |||||||| |||||||||| || | |||||||    
T  29372872 aatcatataagaccaaaaattatttaataccataaaa 29372908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 482 - 637
Target Start/End: Original strand, 32873761 - 32873917
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||||||| |||| ||| |||  |||||||||||||| ||| ||||| |||||| |||||||||||||   ||||||||  |||    
T  32873761 ggacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtctcacgtacaagttgtctgaaataccaaaatagcattttgtccctcaa 32873860  T
Q  582 aaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    ||||||||||| ||||||||||| ||||   ||| ||||| |||| |||||||||||    
T  32873861 aaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 32873917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 469 - 609
Target Start/End: Complemental strand, 48894833 - 48894693
Alignment:
Q  469 gatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatc 568  Q
    ||||||| |||  |||||||||||   |||||||||  |||||||| |||  |||||||||||||| ||| |||||||  |||||||  |||||||||      
T  48894833 gatgcaagggacaggacaaaaactcatatttttgtcattcactaaaccacatcacaactttttgtcccacgtacaaatcatctaaaaatccaaaataaca 48894734  T
Q  569 ttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||| ||||||||| ||||| ||||||||||||||||    
T  48894733 ttttgtcccccaaaaatcttataaaacaaaaaattattcaa 48894693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 620
Target Start/End: Complemental strand, 1870238 - 1870099
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgt-ccacca 580  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||| ||||||||  |||||| ||   |    
T  1870238 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctaaa 1870139  T
Q  581 aaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||| ||||||||||| ||||  |||||||||    
T  1870138 aaaatcgtataaaacaaaaaattactcaatgtcataaaaa 1870099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 498 - 637
Target Start/End: Complemental strand, 9913612 - 9913473
Alignment:
Q  498 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 597  Q
    ||||||| ||||| ||| |||  ||||||||||| || ||| ||||  |||||||||||||||||||||  ||| |||| ||||||||||||||| || |    
T  9913612 ttttgtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaataacatttcgtcccccaaaaatcgtataaaacta 9913513  T
Q  598 aaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||   |||||||| |||| ||||| |||||    
T  9913512 aaaattattcaattccataaaaatttgtcatgtggtgttc 9913473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 498 - 637
Target Start/End: Complemental strand, 9927300 - 9927161
Alignment:
Q  498 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 597  Q
    ||||||| ||||| ||| |||  ||||||||||| || ||| ||||  |||||||||||||||||||||  ||| |||| ||||||||||||||| || |    
T  9927300 ttttgtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaataacatttcgtcccccaaaaatcgtataaaacta 9927201  T
Q  598 aaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||   |||||||| |||| ||||| |||||    
T  9927200 aaaattattcaattccataaaaatttgtcatgtggtgttc 9927161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 540 - 635
Target Start/End: Original strand, 41903604 - 41903699
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgt 635  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| |||||||||| ||||| | |||||||  || |||||||||||    
T  41903604 tacaaattgtctaaaatactaaaatagtcttttgtccaccaaacatcatataaaacaaaaaattgttcaagaccataaaagtttatgatgtgttgt 41903699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 637
Target Start/End: Complemental strand, 43368304 - 43368149
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||||| |||||  ||| ||| |||||||||||||||  || ||||| |||||||||||| |||||||   ||||||||  | |    
T  43368304 ggacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcctacgtacaagttgtctaaaatatcaaaatagcattttgtccctcca 43368205  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||| ||||||||||||||||  | ||||||| |||| ||||| |||||    
T  43368204 aaatcgtataaaacaaaaaattattcaatgtgataaaaatttgtcatgtgctgttc 43368149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 483 - 601
Target Start/End: Original strand, 3922696 - 3922814
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||| |||||| ||| ||| ||||||||||||||| ||| ||||| || |||||||||||||||||   ||||||||  ||||    
T  3922696 gacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaa 3922795  T
Q  583 aatcgtataagacaaaaaa 601  Q
    |||||||||| ||||||||    
T  3922796 aatcgtataaaacaaaaaa 3922814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 17237178 - 17237052
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||||  |||||||| |||  |||||||||||||| ||| |||||||| |||||||  |||||||||  ||| |||| |||||    
T  17237178 gacaaaaactcatatttttgtcattcactaaaccacaacacaactttttgtctcacgtacaaattatctaaaaatccaaaataacatttcgtcccccaaa 17237079  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||| ||||| ||||||||||||||||    
T  17237078 aatcttataaaacaaaaaattattcaa 17237052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 503 - 601
Target Start/End: Complemental strand, 21133454 - 21133356
Alignment:
Q  503 tccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 601  Q
    ||||||| |||| |||  |||||||||||||| ||||||||||||||||||||||||||||||   ||| |||  ||||||||||||||| ||||||||    
T  21133454 tccctcaataaaccacatcacaactttttgtctcacatacaaattgtctaaaataccaaaatagcatttcgtctcccaaaaatcgtataaaacaaaaaa 21133356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 520 - 609
Target Start/End: Complemental strand, 47947825 - 47947736
Alignment:
Q  520 gcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  47947825 gcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 47947736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 22724490 - 22724650
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||||||| |||||| | || |||| ||||  ||||||| ||  |||||||||||||||| ||| ||| || ||||||| |||| ||| ||||| |||    
T  22724490 ttcagggacaggacaaactggaggcaagggatatgacaaaagctgcaatttttgtccctcaccaaaccacagcgcaactttatgtcccacgtacaagttg 22724589  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||   ||| |||  ||||||||| ||||| ||| ||||||||||||    
T  22724590 tctaaaatacaaaaatagcatttcgtcgcccaaaaatcatataatacagaaaattattcaa 22724650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 43158645 - 43158805
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||||||||| || ||| |||  |||||||||||||| ||| ||||| |||    
T  43158645 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcccacgtacaagttg 43158744  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||| | |||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  43158745 tctaaaacatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 43158805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 3892018 - 3892145
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||| ||||| ||||||| |||||||||||||||  || ||||| ||||||| ||||||||||||   |||||| |  |||    
T  3892018 ggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgtctagaataccaaaatagcattttgttcctcaa 3892117  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||| ||| ||||||||||| ||||    
T  3892118 aaatcgtgtaaaacaaaaaattactcaa 3892145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 482 - 625
Target Start/End: Original strand, 41665567 - 41665710
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||  |||||||||||||| | ||| |||  |||||||||||||| ||| ||||| ||||||||||||| ||||||   ||| |||  ||||    
T  41665567 ggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatacaaaaatagcatttcgtcacccaa 41665666  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||  ||||| ||| |||||||||||| | |||||||| ||||    
T  41665667 aaattatataaaacagaaaattattcaataccataaaaatttgt 41665710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 601
Target Start/End: Complemental strand, 22631827 - 22631722
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||| |||| ||| |||  || |||||||||| | || ||||| ||||||||||||||||||| || ||| |||| ||||||||||||||| ||    
T  22631827 atttttgtccttcaccaaaccacaacataactttttgttatacgtacaagttgtctaaaataccaaaatgatatttcgtcccccaaaaatcgtataaaac 22631728  T
Q  596 aaaaaa 601  Q
    ||||||    
T  22631727 aaaaaa 22631722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 637
Target Start/End: Complemental strand, 34117541 - 34117400
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  ||||| |||||||  ||  ||||| ||||||||||| ||||||||   ||| |||| ||||||||||||||| ||    
T  34117541 atttttgtccctcaccaaaccacatcacaattttttgttccatgtacaagttgtctaaaatgccaaaatagcatttcgtcccccaaaaatcgtataaaac 34117442  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
     |||||||||||||   |||||||| ||||  ||||||||||    
T  34117441 gaaaaattattcaatgccataaaaatttgtcttgtgttgttc 34117400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 625
Target Start/End: Original strand, 43213931 - 43214060
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||| |||| ||| |||  |||||||||||||| ||||||||| ||||| ||||||||||||||   ||| || |  |||||||| ||||| ||    
T  43213931 atttttgtccttcaccaaaccacaacacaactttttgtcccacatacaagttgtcaaaaataccaaaatagcatttcgtgcctcaaaaatcctataaaac 43214030  T
Q  596 aaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||| ||||||  ||||||||| ||||    
T  43214031 aaaaaatgattcaatgtcataaaaatttgt 43214060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 46408978 - 46408865
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| |||||||||||||||  |||||||| |||||||||||| |||||||   | |||||   |||||||||||||| |     
T  46408978 atttttgtccctcaccaaaccacagcacaactttttgtccgacatacaagttgtctaaaatatcaaaatagcatattgtctctcaaaaatcgtataaaat 46408879  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  46408878 aaaaaattactcaa 46408865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 46448650 - 46448763
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||| |||||||| ||| ||||||||||||||| ||  || ||||| |||||||  |||||||||  ||| |||| | ||||||| ||||| ||    
T  46448650 atttttgtccgtcactaaaccacagcacaactttttgtcccatgtataaattatctaaaaatccaaaataacatttcgtcccctaaaaatcttataaaac 46448749  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||||||||    
T  46448750 aaaaaattattcaa 46448763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 43189235 - 43189362
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgt-ccaccaa 581  Q
    ||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| ||||||| |||||||||||| | |||||| || ||||    
T  43189235 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctagaataccaaaatagtattttgtccccccaa 43189334  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||| | |||| |||||| ||||    
T  43189335 aaatcgtatgaaacaacaaattactcaa 43189362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 637
Target Start/End: Complemental strand, 1363725 - 1363585
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||  ||| |||  |||||||||||||| ||| ||||  ||||| ||||||| ||||||   ||| || | |||||||| |||||| ||    
T  1363725 atttttgtccctcatcaaaccacatcacaactttttgtctcacgtacaggttgtcaaaaatacaaaaatagcatttcgtac-ccaaaaattgtataaaac 1363627  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||   |||||||| |||| |||||||||||    
T  1363626 aaaaaattattcaatgccataaaaatttgtcatgtgttgttc 1363585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 601
Target Start/End: Complemental strand, 20127378 - 20127273
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||| |||||  ||| |||  |||||||||||||| ||| ||||| |||| |||||||||||||| |  ||| |||| ||||||||||||||| ||    
T  20127378 atttttgttcctcagcaaaccacatcacaactttttgtcccacgtacaatttgtgtaaaataccaaaatgacatttcgtcccccaaaaatcgtataaaac 20127279  T
Q  596 aaaaaa 601  Q
    ||||||    
T  20127278 aaaaaa 20127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 605
Target Start/End: Complemental strand, 30053046 - 30052925
Alignment:
Q  484 acaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaa 583  Q
    |||||||||| |||| |||||| |||||||| ||| ||| || |||||||| | |||| || |||||||||||| ||||||| |  ||||| || |||||    
T  30053046 acaaaaactaaaattcttgtccttcactaaaacacggcataattttttgtctcgcatataagttgtctaaaatatcaaaatagttgtttgttcatcaaaa 30052947  T
Q  584 atcgtataagacaaaaaattat 605  Q
    || ||||||||| ||| |||||    
T  30052946 attgtataagaccaaatattat 30052925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 46627259 - 46627146
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||| |||||||  ||| ||| |||||| |||||||| ||| |||  |||||||||||||| |||||| | ||| |||  |||||||| |||||| ||    
T  46627259 atttttatccctcatcaaaccacagcacaattttttgtctcacgtacggattgtctaaaatacaaaaatagtatttcgtctcccaaaaattgtataaaac 46627160  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||||||||    
T  46627159 aaaaaattattcaa 46627146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 625
Target Start/End: Original strand, 30259938 - 30260042
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||||||||| ||  || ||||| |||||||||||| |||| |||| |||| | || ||||| ||||||||||  ||||||||||||| ||||||||||    
T  30259938 cacaactttttatcttacttacaagttgtctaaaatatcaaattaattttttattcatcaaaactcgtataagatcaaaaattattcaatatcataaaaa 30260037  T
Q  621 cttgt 625  Q
     ||||    
T  30260038 tttgt 30260042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 449 - 565
Target Start/End: Complemental strand, 34519644 - 34519528
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||||||||  | || |||| |||  |||||||||||  |||||||||||||| | ||| |||  |||||||||||||| ||  ||||| |||    
T  34519644 ttcagggacatgacaagctggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcccaggtacaagttg 34519545  T
Q  549 tctaaaataccaaaata 565  Q
    |||||||||| ||||||    
T  34519544 tctaaaatacaaaaata 34519528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 585
Target Start/End: Complemental strand, 42332123 - 42332059
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 585  Q
    |||||||||||||| |||||||||||||||| ||||| ||||||||  |||| ||||||||||||    
T  42332123 cacaactttttgtctcacatacaaattgtcttaaatatcaaaataacattttatccaccaaaaat 42332059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 3359911 - 3359970
Alignment:
Q  560 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||| | ||||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  3359911 aaaatagttttttgtcgaccaaaaatagtataagacaaaaaattattcaatatcataaaa 3359970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 606
Target Start/End: Complemental strand, 44668865 - 44668786
Alignment:
Q  528 ttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcca-ccaaaaatcgtataagacaaaaaattatt 606  Q
    ||||||| |||||||||||| || ||||||||||||||   ||||||| | ||||||||||||||||| |||||||||||    
T  44668865 ttttgtctcacatacaaattttcaaaaataccaaaatagctttttgtcgatccaaaaatcgtataagataaaaaattatt 44668786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 449 - 630
Target Start/End: Complemental strand, 37967110 - 37966929
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||||| ||||||| |||   |||||||||    |||||||||  |||||| | |||  |||||||||||||  ||| ||||| ||     
T  37967110 ttcaggtacatgacaaattggatgcaagggacaagacaaaaacccatatttttgtctttcactagaccacatcacaactttttgttccacgtacaagtta 37967011  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgt 630  Q
    |||||||  ||||||||   ||| ||||   ||||||||||||| ||||||||||||| || | |||||||| |||| ||||    
T  37967010 tctaaaaatccaaaatagcatttcgtcccaaaaaaatcgtataaaacaaaaaattatttaataccataaaaatttgttatgt 37966929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 539 - 605
Target Start/End: Original strand, 8083785 - 8083847
Alignment:
Q  539 atacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattat 605  Q
    ||||||||||||||||||  ||||||| |||||| |||||  |||||||||||||||||||||||||    
T  8083785 atacaaattgtctaaaat--caaaatagtcttttatccac--aaaatcgtataagacaaaaaattat 8083847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 609
Target Start/End: Original strand, 21408331 - 21408419
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||| ||||||||  || || || |||| |||||||| |||| || |||||||||| ||||||| |||||||||||| ||||||||||    
T  21408331 cacaattttttgtcctacgtataagttgtttaaaatacgaaaagaaccttttgtccatcaaaaattgtataagacaaagaattattcaa 21408419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 449 - 565
Target Start/End: Original strand, 26910369 - 26910485
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||||||| | |||| | || |||| |||  ||| |||||||  |||||||||||||| | ||| |||  |||||||||||||||||| ||||| |||    
T  26910369 ttcagggacagggcaaactggaggcaagggacaggataaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcacacgtacaagttg 26910468  T
Q  549 tctaaaataccaaaata 565  Q
    || ||||||| ||||||    
T  26910469 tcaaaaatacaaaaata 26910485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 636
Target Start/End: Original strand, 29455880 - 29455992
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||| ||||||| | || |  ||||||||||||||   ||||||||||| |||||| |||||||| ||| ||||||||| | |||||||     
T  29455880 cacaactttttgtcccacatactagttat--aaaataccaaaatagcgttttgtccacc-aaaatcatataagaccaaatattattcaataccataaaag 29455976  T
Q  621 cttgtgatgtgttgtt 636  Q
     |||| ||||||||||    
T  29455977 tttgtcatgtgttgtt 29455992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 619
Target Start/End: Complemental strand, 35645548 - 35645413
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    |||||||||| ||||| | ||||||||||||| |||  ||||||||||| ||  || ||||| ||||||||||||  |||||| || ||| | || | ||    
T  35645548 gacaaaaact-gaattctcgtccctcactaaaccacaacacaactttttatcgtacgtacaagttgtctaaaataataaaatagtcattttttcatccaa 35645450  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||||||||| ||||||| |  ||||| |||||||    
T  35645449 aatcgtataagataaaaaatgacccaacaccataaaa 35645413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 615
Target Start/End: Complemental strand, 38360129 - 38360041
Alignment:
Q  527 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat 615  Q
    |||||||| ||| ||||| |||| |||||||| |||||||| ||||||||| |||||||  ||||  || ||||||||||||| |||||    
T  38360129 tttttgtctcacctacaagttgtttaaaatacaaaaataatattttgtccaacaaaaattatatagaaccaaaaattattcaatatcat 38360041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 487 - 582
Target Start/End: Original strand, 42072995 - 42073090
Alignment:
Q  487 aaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||| |||||||||  |||| ||||| |  |||||| |||||||  || |||||| ||||||||||||| |||||||| |||| |||||||||    
T  42072995 aaaactaaaatttttgtttctcattaaattatagcacaattttttgtttcaaatacaagttgtctaaaatacaaaaataatattttatccaccaaa 42073090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 779 - 821
Target Start/End: Complemental strand, 20204289 - 20204247
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattatta 821  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  20204289 cacatgtgattacgttcaaatgattcattttctcaaattatta 20204247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 499 - 609
Target Start/End: Original strand, 21408635 - 21408744
Alignment:
Q  499 tttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaa 598  Q
    ||||||||||| |||| |||  || |||||||| |  ||  ||||| || |||||||||| |||||| | ||| |||||| ||||||||||||||| |||    
T  21408635 tttgtccctcattaaaccacaacataactttttatttcatgtacaagttatctaaaatacaaaaatagt-tttcgtccactaaaaatcgtataagataaa 21408733  T
Q  599 aaattattcaa 609  Q
    |||||||||||    
T  21408734 aaattattcaa 21408744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 496 - 620
Target Start/End: Complemental strand, 11250706 - 11250587
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| || |      ||||||||||||||||| ||   ||||||||  |||||||| ||||| ||    
T  11250706 atttttgtccctcaccaaaccacaacacaactttttgtcccatag-----ttgtctaaaataccaaactagcattttgtccctcaaaaatcatataaaac 11250612  T
Q  596 aaaaaattattcaacatcataaaaa 620  Q
    ||||||||| |||| | ||||||||    
T  11250611 aaaaaattactcaataccataaaaa 11250587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 546 - 602
Target Start/End: Original strand, 45063622 - 45063678
Alignment:
Q  546 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 602  Q
    |||||||||||||||||||||| |||| |||| |||| ||| ||||||| |||||||    
T  45063622 ttgtctaaaataccaaaataattttttttccatcaaagatcatataagataaaaaat 45063678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 766 - 822
Target Start/End: Complemental strand, 47045836 - 47045780
Alignment:
Q  766 gacacgacactctcacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    ||||| |||||  ||||| ||||| ||||||||| ||||||||||||||||||||||    
T  47045836 gacacaacactggcacatatgatttcgttcaaatcattcattttctcaaattattac 47045780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 821
Target Start/End: Original strand, 3262871 - 3262926
Alignment:
Q  766 gacacgacactctcacatgtgattgcgttcaaataattcattttctcaaattatta 821  Q
    |||||||||||  |||||||| |||| |||||||| |||| |||||||||||||||    
T  3262871 gacacgacactgacacatgtggttgcattcaaatatttcactttctcaaattatta 3262926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 601
Target Start/End: Complemental strand, 16963147 - 16963092
Alignment:
Q  546 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 601  Q
    ||||||||||||||||||||   ||||||||  |||||||||||||| ||||||||    
T  16963147 ttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaa 16963092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 637
Target Start/End: Original strand, 22724024 - 22724179
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||  ||| ||||||| || | ||| |||  | ||||||||| || ||| ||||| |||| |||||||| ||||||   ||| |||  ||||    
T  22724024 ggacaaaaactgcaatgtttgtccatcgccaaaccacaacgcaactttttatcccacgtacaagttgtataaaatacaaaaatagcatttcgtcacccaa 22724123  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||| ||||| ||| |||||||||||| | |||||||| || |  ||||||||||    
T  22724124 aaatcatataatacagaaaattattcaataccataaaaatttatcttgtgttgttc 22724179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 495 - 577
Target Start/End: Complemental strand, 7958715 - 7958634
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcca 577  Q
    |||||||||| |||||||| |||  ||| |||||||||||  |  ||||| |||||||||||||||||||| | |||||||||    
T  7958715 aatttttgtcactcactaa-tcatagcataactttttgtctgaagtacaagttgtctaaaataccaaaatagttttttgtcca 7958634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 69; Significance: 2e-30; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 18018 - 18178
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  18018 ttcaggtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 18117  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  18118 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 18178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 12533 - 12660
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  12533 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 12632  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  12633 aaatcgtataaaacaaaaaattactcaa 12660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 2e-30; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 10324108 - 10324268
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  10324108 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttg 10324207  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  |||||||| | ||||||||||||| ||||||||||| ||||    
T  10324208 tctaaaataccaaaataacattttgtccccaaaaaatcgtataaaacaaaaaattactcaa 10324268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 453 - 635
Target Start/End: Original strand, 7396127 - 7396306
Alignment:
Q  453 gggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtcta 552  Q
    ||||||||||||  | || ||||||||  |||||||||| |||| | ||||||||||||||| |||| |||||||||||||| ||| ||||| || ||||    
T  7396127 gggacatgacaagctggaagcaatggacaggacaaaaac-agaaatcttgtccctcactaaaccactacacaactttttgtctcacgtacaagttatcta 7396225  T
Q  553 aaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgt 635  Q
    |||||| |||||| | ||||||||| ||||||| |||| ||||  |||||||||||| | |||||||| |||| |||||||||    
T  7396226 aaatacaaaaatagtgttttgtccatcaaaaatggtatgagac--aaaattattcaataccataaaaatttgtcatgtgttgt 7396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 482 - 636
Target Start/End: Complemental strand, 10485256 - 10485102
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||    
T  10485256 ggacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaa 10485157  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    ||||||||||| ||||||||||||||||  ||||||| | ||||  |||||||||    
T  10485156 aaatcgtataaaacaaaaaattattcaatgtcataaatatttgtcctgtgttgtt 10485102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 482 - 620
Target Start/End: Original strand, 32409882 - 32410020
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| |||  |||| |||||||||||||||||||| | ||||||||  |||    
T  32409882 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccactcacaagttgtctaaaataccaaaatagtattttgtccctcaa 32409981  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||||||||| ||||||||||||||||  |||||||||    
T  32409982 aaatcgtataaaacaaaaaattattcaatgtcataaaaa 32410020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 449 - 637
Target Start/End: Complemental strand, 2615028 - 2614839
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  2615028 ttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 2614929  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    |||||||||||||||||   ||||||||  |||||||||||||| | ||||||||| ||||   ||| ||||| |||| |||||||||||    
T  2614928 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaataaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 2614839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 17443394 - 17443234
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| ||||||||| |||  |||||||||||   |||||| |||||||| ||| ||| | ||||||||||||| ||| ||||| |||    
T  17443394 ttcaggtacaggacaaactagatgcaagggacaggacaaaaactcatatttttatccctcaccaaaccacagtacaactttttgtcccacgtacaagttg 17443295  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||| |||| ||||||||||||||| ||| ||||||||||||    
T  17443294 tctaaaataccaaaatagcatttcgtcctccaaaaatcgtataaaacataaaattattcaa 17443234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 3932837 - 3932964
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||    
T  3932837 ggacaaaaactcatatttttgtctctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaa 3932936  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||||||||    
T  3932937 aaatcgtataaaacaaaaaattattcaa 3932964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 17867920 - 17867807
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  17867920 atttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 17867821  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  17867820 aaaaaattactcaa 17867807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 17877703 - 17877590
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  17877703 atttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 17877604  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  17877603 aaaaaattactcaa 17877590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 496 - 620
Target Start/End: Complemental strand, 24242749 - 24242625
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  24242749 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 24242650  T
Q  596 aaaaaattattcaacatcataaaaa 620  Q
    ||||||||| ||||  |||||||||    
T  24242649 aaaaaattactcaatgtcataaaaa 24242625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 482 - 637
Target Start/End: Complemental strand, 10960099 - 10959944
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| ||||||||||||| ||||||   |||||||| ||||    
T  10960099 ggacaaaaactcatatttttgtccctcaacaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcattttgtcccccaa 10960000  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||| |||||| || ||||||   |||||||| |||| |||||||||||    
T  10959999 aaatcgtataaaacaaaatatcattcaatgccataaaaatttgtcatgtgttgttc 10959944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 11613821 - 11613948
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||| |||||||||||||||   ||||||||  |||    
T  11613821 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtataaaataccaaaatagcattttgtccctcaa 11613920  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  11613921 aaatcgtataaaacaaaaaattactcaa 11613948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 449 - 619
Target Start/End: Complemental strand, 29054488 - 29054319
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| || |||| |||   ||||||||||| |||||||||||||| | ||| ||| ||||||||||||||| ||| ||||| |||    
T  29054488 ttcaggaacaggacaaattggaagcaagggacatgacaaaaactacaatttttgtccctcgccaaaccacagcacaactttttgtctcacgtacaagttg 29054389  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    ||||||||| ||||||||  ||| |||  ||||||||| ||||| ||| |||||||||||| | |||||||    
T  29054388 tctaaaata-caaaataacatttcgtcacccaaaaatcatataatacagaaaattattcaataccataaaa 29054319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 34176928 - 34176802
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||| ||||| ||||||| ||||||||||||||| ||| ||||| | ||||||||||||||||||   ||||||||  ||||    
T  34176928 gacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcccacgtacaagtagtctaaaataccaaaatagcattttgtccctcaaa 34176829  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  34176828 aatcgtataaaacaaaaaattactcaa 34176802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 456 - 609
Target Start/End: Complemental strand, 18057644 - 18057491
Alignment:
Q  456 acatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaa 555  Q
    |||||||||| |||||| || |||   ||||||||||   ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| ||||||||||    
T  18057644 acatgacaaactagatgtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaa 18057545  T
Q  556 taccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||   ||| |||| | ||||||||||||| ||| ||||||||||||    
T  18057544 taccaaaatagcatttcgtcctctaaaaatcgtataaaacataaaattattcaa 18057491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 14925453 - 14925613
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||||| || |||  |||||||||||   ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| |||    
T  14925453 ttcaggtacaggacaaactagatgtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttg 14925552  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||  |||| | ||||||||||||| ||| ||||||||||||    
T  14925553 tctaaaataccaaaatagcattccgtcccctaaaaatcgtataaaacataaaattattcaa 14925613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 3259782 - 3259655
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  3259782 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 3259683  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  3259682 aaatcgtataaaacaaaaaattactcaa 3259655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 24203461 - 24203335
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  |||||||| |  |    
T  24203461 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc-ctca 24203363  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    |||| |||||| ||||||||||| ||||    
T  24203362 aaattgtataaaacaaaaaattactcaa 24203335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 522 - 620
Target Start/End: Complemental strand, 7365446 - 7365348
Alignment:
Q  522 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| || ||||||| | |||||| ||||||||| |||||||||| || | ||||||||    
T  7365446 acaactttttgtcacacataaaaattgtctaaaatatcaaaatagtcatttgtccgcaaaaaatggtataagactaaaaattatttaataccataaaaa 7365348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 482 - 592
Target Start/End: Original strand, 9902688 - 9902798
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||||||||||| |||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  ||| |||| ||||    
T  9902688 ggacaaaaactgatatttttgtccctcattaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacatttcgtcccccaa 9902787  T
Q  582 aaatcgtataa 592  Q
    ||||| |||||    
T  9902788 aaatcatataa 9902798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 496 - 637
Target Start/End: Original strand, 31870144 - 31870285
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| || |  ||||||||||||| ||||||   ||| |||| |||||| |||||||| ||    
T  31870144 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtctaaaatacaaaaatagcatttcgtcccccaaaactcgtataaaac 31870243  T
Q  596 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||   |||||||| |||| |||||||||||    
T  31870244 aaaaaattattcaatgccataaaaatttgtcatgtgttgttc 31870285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 11279227 - 11279100
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   |||| |||  |||    
T  11279227 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttatccctcaa 11279128  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    |||||| |||| ||||||||||| ||||    
T  11279127 aaatcgaataaaacaaaaaattactcaa 11279100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 15277310 - 15277437
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| ||||||||||||||||||||   |||||||  ||||    
T  15277310 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattttgtcttccaa 15277409  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| |||| |||||| ||||    
T  15277410 aaatcgtataaaacaacaaattactcaa 15277437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 32132410 - 32132537
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||  |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||    
T  32132410 ggacaaaaactcatatttttgtccctcaccaatccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaa 32132509  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| |||| |||||| ||||    
T  32132510 aaatcgtataaaacaacaaattactcaa 32132537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 449 - 605
Target Start/End: Complemental strand, 11382194 - 11382040
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||||||  |||| ||| |||  |||||||||||||| ||| ||||| |||    
T  11382194 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtc--tcaccaaaccacaacacaactttttgtctcacgtacaagttg 11382097  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattat 605  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||||    
T  11382096 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattat 11382040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 496 - 604
Target Start/End: Original strand, 34684027 - 34684136
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaa-taccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    ||||||||||||||| ||| |||  |||||||||||||  ||| ||||| |||||||||| ||||||||||   |||||||| ||||||||||||||| |    
T  34684027 atttttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaaataccaaaatagcattttgtcctccaaaaatcgtataaaa 34684126  T
Q  595 caaaaaatta 604  Q
    ||||||||||    
T  34684127 caaaaaatta 34684136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 496 - 620
Target Start/End: Original strand, 166967 - 167091
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||| ||||   ||||||| ||||| ||    
T  166967 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttcgtcccttaaaaatcatataaaac 167066  T
Q  596 aaaaaattattcaacatcataaaaa 620  Q
    ||||||||| ||||  |||||||||    
T  167067 aaaaaattactcaatgtcataaaaa 167091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 601
Target Start/End: Complemental strand, 3379808 - 3379690
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||| ||||| ||| ||  ||||||||||||||| ||||||||| |||||| |||||||||||||   ||| |||| |||||    
T  3379808 gacaaaaactgatatttttgtcgctcaccaaaccatagcacaactttttgtctcacatacaagttgtcttaaataccaaaatagcatttcgtcctccaaa 3379709  T
Q  583 aatcgtataagacaaaaaa 601  Q
    |||| ||||| ||||||||    
T  3379708 aatcatataaaacaaaaaa 3379690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 637
Target Start/End: Original strand, 18597201 - 18597343
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    |||||||||||||||| ||| |||  |||||||||||||| ||| || || ||||||||||  | |||||| |  || ||||  |||||||| ||||| |    
T  18597201 aatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataagttgtctaaaacgctaaaatagtacttcgtccctcaaaaatcatataaaa 18597300  T
Q  595 caaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||| | |||||||| || | |||||||||||    
T  18597301 caaaaaattattcaataccataaaaatttattatgtgttgttc 18597343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 601
Target Start/End: Original strand, 8177925 - 8178030
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||||||| || ||| |||  |||||||||||||| ||| | ||| |||||||||||||||||||||  ||| |||| ||||||||| ||||| ||    
T  8177925 atttttgtcccttaccaaaccacaacacaactttttgtcccacgttcaagttgtctaaaataccaaaataacatttcgtcccccaaaaatcatataaaac 8178024  T
Q  596 aaaaaa 601  Q
    ||||||    
T  8178025 aaaaaa 8178030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 15276934 - 15277094
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| |||    
T  15276934 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttttcccacgtacaagttg 15277033  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||| | |||||||   ||||||||  |||||||| ||||| ||||||||||| ||||    
T  15277034 tctaaaagaacaaaatagcattttgtccctcaaaaatcttataaaacaaaaaattactcaa 15277094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 449 - 625
Target Start/End: Complemental strand, 32860183 - 32860007
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||||||||| | || |||| |||   ||||||| ||  ||||||||||| || | ||| ||| ||||||| ||||||| ||| ||||| ||     
T  32860183 ttcagggacatgacaaactggaggcaagggacatgacaaaagctgcaatttttgtccatcgccaaaccacagcacaaccttttgtctcacgtacaagttt 32860084  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    |||||||||| |||||||  ||| |||  |||||||||  |||| ||| |||||||||||| | |||||||| ||||    
T  32860083 tctaaaatacaaaaataacatttcgtcacccaaaaatcaaataatacagaaaattattcaataccataaaaatttgt 32860007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 609
Target Start/End: Complemental strand, 11212340 - 11212229
Alignment:
Q  498 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 597  Q
    ||||||||||||| ||| |||  || ||| ||||||| ||| | ||| |||||||||||||||||||||  ||||||||  ||||||||| |||| ||||    
T  11212340 ttttgtccctcaccaaaccacaacataaccttttgtctcacgtgcaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgaataaaacaa 11212241  T
Q  598 aaaattattcaa 609  Q
    ||||||| ||||    
T  11212240 aaaattactcaa 11212229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 486 - 609
Target Start/End: Original strand, 16542309 - 16542432
Alignment:
Q  486 aaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 585  Q
    ||||| || |||| ||||| ||||| ||||||||  |||| ||||| |  ||  ||||| ||||||||||||||||||||| ||||| | || |||||||    
T  16542309 aaaaattaaaattcttgtctctcacaaaatcactatacaaatttttatttcaagtacaagttgtctaaaataccaaaataaccttttatgcaacaaaaat 16542408  T
Q  586 cgtataagacaaaaaattattcaa 609  Q
     |||||||| ||||||||||||||    
T  16542409 tgtataagataaaaaattattcaa 16542432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 585
Target Start/End: Original strand, 4494159 - 4494248
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 585  Q
    ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| |||||||||||||| ||||||  |||||||| | ||||||    
T  4494159 atttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccgaaataacattttgtccccaaaaaat 4494248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 619
Target Start/End: Original strand, 29424655 - 29424734
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    ||||| || |||||||||| |||||| | |||||||||||||||| |||| ||||| ||||||||||||| | |||||||    
T  29424655 tacaagttatctaaaatacaaaaatagttttttgtccaccaaaaaacgtacaagaccaaaaattattcaataccataaaa 29424734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 8844488 - 8844422
Alignment:
Q  540 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 606  Q
    ||||| |||||||| |||| |||||| |||||||||||||||| || |||||||||||| |||||||    
T  8844488 tacaagttgtctaagatactaaaatagtcttttgtccaccaaacatagtataagacaaacaattatt 8844422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 521 - 611
Target Start/End: Complemental strand, 9614034 - 9613944
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaaca 611  Q
    ||||| |||||||  ||| || || ||||||||||||| ||||||||||| ||||||| || |||| ||||| || |||||||||||||||    
T  9614034 cacaattttttgttccacgtataagttgtctaaaatactaaaataatcttctgtccacaaataatcatataacaccaaaaattattcaaca 9613944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 637
Target Start/End: Complemental strand, 27756375 - 27756249
Alignment:
Q  511 taaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaac 610  Q
    ||||||||  |||||||||||||| | | || || |||||||||||| ||||||||  |||| ||||| ||| |||||| ||||| ||| |||||||||     
T  27756375 taaatcacaacacaactttttgtcccccgtataagttgtctaaaatatcaaaataacattttatccactaaatatcgtacaagaccaaagattattcaat 27756276  T
Q  611 atcataaaaacttgtgatgtgttgttc 637  Q
    || |||  || ||||| ||||||||||    
T  27756275 attatagcaaattgtgttgtgttgttc 27756249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 500 - 638
Target Start/End: Original strand, 27824698 - 27824836
Alignment:
Q  500 ttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaa 599  Q
    |||||||||| || | |||  |||||||||||||| ||| ||| | || || ||||||| ||||||   ||||||||| |||||||| |||||||  |||    
T  27824698 ttgtccctcattataccacatcacaactttttgtcccacgtacgagttatccaaaatacaaaaatagctttttgtccaacaaaaatcatataagatcaaa 27824797  T
Q  600 aattattcaacatcataaaaacttgtgatgtgttgttcc 638  Q
    |||||||||| | |||||||  |||| |||| |||||||    
T  27824798 aattattcaataccataaaagtttgtcatgtattgttcc 27824836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 483 - 637
Target Start/End: Original strand, 35004159 - 35004313
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||| | |||||||| ||||   || |||  ||||||| |||||| ||| ||||| || ||||||||| |||||||   ||||||| |  |||    
T  35004159 gacaaaaactaaattttttgtctctcatataaccacaacacaactctttgtcccacgtacaagttttctaaaatatcaaaatagatttttgtcaataaaa 35004258  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||| |||||| || ||||| ||||||| |||||||||  |||| |||||||||||    
T  35004259 aattgtataataccaaaaactattcaatatcataaaagtttgttatgtgttgttc 35004313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 482 - 618
Target Start/End: Complemental strand, 3290769 - 3290635
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||||||||| || ||| |||  |||||||||||  | ||| || || ||||||||||||||||||||   ||||||||  |||    
T  3290769 ggacaaaaactcatatttttgtcccttaccaaaccacaacacaacttttt--cccacgtataagttgtctaaaataccaaaatagcattttgtccctcaa 3290672  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaa 618  Q
    ||||| ||||| ||||| ||||||||||  |||||||    
T  3290671 aaatcatataaaacaaacaattattcaatgtcataaa 3290635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 483 - 636
Target Start/End: Original strand, 5650735 - 5650888
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  ||||||||| |||||||||||||  ||||||| ||| ||| |||||| ||||||   ||||||||||| ||   |||||||||||| |    
T  5650735 gacaaaaactgaaatttttgttcctcactaaatcatagcacaacatttggtctcacatataaattgcgcaaaataccaaagtagctttttgtccaccaca 5650834  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    ||| ||| ||||  | |||| |||||| | || ||||| |||| || |||||||    
T  5650835 aattgtacaagatcagaaatcattcaataccacaaaaatttgtcatttgttgtt 5650888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 14808045 - 14808157
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| || |  ||||||||  |||||||||||  |||  ||| ||||||||||||||| ||    
T  14808045 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtctaag-taccaaaataacatttcatcccccaaaaatcgtataaaac 14808143  T
Q  596 aaaaaattattcaa 609  Q
     |||||||||||||    
T  14808144 taaaaattattcaa 14808157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 32614035 - 32614091
Alignment:
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattat 605  Q
    |||||||||  |||||||  ||||||||||||||||||||||||||| |||||||||    
T  32614035 tctaaaatataaaaataactttttgtccaccaaaaatcgtataagaccaaaaattat 32614091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 779 - 821
Target Start/End: Complemental strand, 6074077 - 6074035
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattatta 821  Q
    ||||| ||||| |||||||||||||||||||||||||||||||    
T  6074077 cacatatgattacgttcaaataattcattttctcaaattatta 6074035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 724 - 770
Target Start/End: Original strand, 11602811 - 11602857
Alignment:
Q  724 atgtggcaccaacagctctgatcaaaggtgtttccagtgtccgacac 770  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||    
T  11602811 atgtggcaccaacacctctgatcaaaggtgtgtccggtgtccgacac 11602857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 603
Target Start/End: Original strand, 15400654 - 15400736
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatt 603  Q
    ||||||||||||||  |  |||||||||| ||||||| ||||||| ||||||||||| || | || |||| ||||||||||||    
T  15400654 cacaactttttgtcttaagtacaaattgtttaaaatatcaaaatagtcttttgtccatcatacattgtatgagacaaaaaatt 15400736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 603
Target Start/End: Original strand, 15412441 - 15412523
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatt 603  Q
    ||||||||||||||  |  |||||||||| ||||||| ||||||| ||||||||||| || | || |||| ||||||||||||    
T  15412441 cacaactttttgtcttaagtacaaattgtttaaaatatcaaaatagtcttttgtccatcatacattgtatgagacaaaaaatt 15412523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 603
Target Start/End: Original strand, 15428035 - 15428117
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatt 603  Q
    ||||||||||||||  |  |||||||||| ||||||| ||||||| ||||||||||| || | || |||| ||||||||||||    
T  15428035 cacaactttttgtcttaagtacaaattgtttaaaatatcaaaatagtcttttgtccatcatacattgtatgagacaaaaaatt 15428117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 785 - 821
Target Start/End: Complemental strand, 6073791 - 6073755
Alignment:
Q  785 tgattgcgttcaaataattcattttctcaaattatta 821  Q
    ||||| |||||||||||||||||||||||||||||||    
T  6073791 tgattacgttcaaataattcattttctcaaattatta 6073755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 779 - 819
Target Start/End: Complemental strand, 6074563 - 6074523
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattat 819  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  6074563 cacatgtgattacgttcaactaattcattttctcaaattat 6074523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 569 - 609
Target Start/End: Complemental strand, 10552789 - 10552749
Alignment:
Q  569 ttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  10552789 ttttgtccaccaaaaatcgtataagatcaaaaattattcaa 10552749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 779 - 822
Target Start/End: Complemental strand, 34490824 - 34490781
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    ||||||||||||| || |||||||||||||||| ||||||||||    
T  34490824 cacatgtgattgcatttaaataattcattttctaaaattattac 34490781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 779 - 821
Target Start/End: Original strand, 6294545 - 6294587
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattatta 821  Q
    |||||| |||||| ||||| |||||||||||||||||||||||    
T  6294545 cacatgcgattgcattcaattaattcattttctcaaattatta 6294587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 635
Target Start/End: Complemental strand, 13412710 - 13412644
Alignment:
Q  569 ttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgt 635  Q
    |||||||||| ||||||| |||||||  ||||||||||||| |  ||||||| |||| |||||||||    
T  13412710 ttttgtccacaaaaaatcatataagatgaaaaattattcaatactataaaaatttgtcatgtgttgt 13412644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 630
Target Start/End: Original strand, 29203043 - 29203104
Alignment:
Q  569 ttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgt 630  Q
    |||||||||| |||| || ||||||||||| |||| ||||| |||||||||| |||| ||||    
T  29203043 ttttgtccacaaaaattcatataagacaaataattgttcaatatcataaaaatttgtcatgt 29203104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 449 - 620
Target Start/End: Original strand, 2302 - 2473
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  2302 ttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 2401  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||||||||||||||| | ||||||||   ||||||| ||||| ||||||||||| ||||  |||||||||    
T  2402 tctaaaataccaaaatagttttttgtcccataaaaatcctataaaacaaaaaattactcaatgtcataaaaa 2473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 6e-30; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 449 - 616
Target Start/End: Complemental strand, 3964421 - 3964255
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||| |||||||||||||| || |||| | | ||||||||||||  |||||||||||||||| ||| ||| ||||||||||||||| ||  ||||| |||    
T  3964421 ttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttg 3964322  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcata 616  Q
    |||||||||||||||||   ||| |||| ||||||||| ||||| ||| |||||||||||| ||||||    
T  3964321 tctaaaataccaaaatagcatttcgtcc-ccaaaaatcatataaaacataaaattattcaatatcata 3964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 483 - 637
Target Start/End: Original strand, 31883008 - 31883162
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||| |||||  ||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| |||||    
T  31883008 gacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaa 31883107  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |||||||||| ||||||||||||||||  ||||||||| ||||  ||||||||||    
T  31883108 aatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgttgttc 31883162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 495 - 636
Target Start/End: Original strand, 3867647 - 3867788
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    |||||||||||||||| ||| ||| |||||||||||||||  || ||||| || ||||||| |||||||||   |||||||| ||||||||| ||||| |    
T  3867647 aatttttgtccctcaccaaaccacagcacaactttttgtcctacgtacaagttttctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaa 3867746  T
Q  595 caaaaaattattcaacatcataaaaacttgtgatgtgttgtt 636  Q
    ||| ||||||||||| | ||||||||||||| ||||||||||    
T  3867747 caagaaattattcaataccataaaaacttgtcatgtgttgtt 3867788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 472 - 609
Target Start/End: Original strand, 53557770 - 53557907
Alignment:
Q  472 gcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttt 571  Q
    ||||||||  |||||||||||   | ||||||||||||| ||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||||   |||    
T  53557770 gcaatggacaggacaaaaactcatagttttgtccctcaccaaaccactgcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 53557869  T
Q  572 tgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||  |||||||||||||| ||||||||||| ||||    
T  53557870 tgtccttcaaaaatcgtataaaacaaaaaattactcaa 53557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 28675923 - 28675763
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||| |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  28675923 ttcaggtacaggacaaactggaggcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 28675824  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  28675823 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 28675763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 39052790 - 39052950
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || ||||||||  |||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  39052790 ttcaggcacaggacaaactggaggcaatggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttg 39052889  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| |||| |||||| ||||    
T  39052890 tctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacaacaaattactcaa 39052950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 637
Target Start/End: Original strand, 51925160 - 51925348
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  51925160 ttcaggtacatgacaaactggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 51925259  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    | |  |||||||||||||  ||| |||| ||||||||||||||| ||||||||||||||||   |||||||| |||| ||||| |||||    
T  51925260 tttttaataccaaaataacatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttc 51925348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 482 - 620
Target Start/End: Original strand, 20609633 - 20609771
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  20609633 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 20609732  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    ||||||||||  ||||||||||| ||||  |||||||||    
T  20609733 aaatcgtatataacaaaaaattactcaatgtcataaaaa 20609771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 1344706 - 1344819
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  1344706 atttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 1344805  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  1344806 aaaaaattactcaa 1344819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 2135203 - 2135043
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| |||| |||| |||  | |||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||||||     
T  2135203 ttcaggtacaggacaaactagaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaaatta 2135104  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||    |||||||  |||||||||||||| ||||||||||| ||||    
T  2135103 tctaaaataccaaaatagcactttgtccctcaaaaatcgtataaaacaaaaaattactcaa 2135043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 483 - 599
Target Start/End: Original strand, 8648543 - 8648659
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  |||| |||| ||| ||||||  ||  |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  8648543 gacaaaaactgaaattcttgttcctaactaaactacatcacaactttttgtcacaagtacaaattgtctaaaataccaaaataatcttttgtccaccaaa 8648642  T
Q  583 aatcgtataagacaaaa 599  Q
     ||| |||| |||||||    
T  8648643 catcatatatgacaaaa 8648659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 34351320 - 34351480
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||||||||| |||| | ||| ||   ||||||||| | |||| ||||||||||  ||| |||  |||||||||||||| ||||||||| |||    
T  34351320 ttcagggacatgacaaactagaggaaatagacacgacaaaaacaaaaattattgtccctcatcaaaccacaacacaactttttgtcgcacatacaagttg 34351419  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||| ||||||||  |||| ||||| |||||||||| ||||| | |||||||||||    
T  34351420 tctaaaatatcaaaataacattttatccacaaaaaatcgtacaagaccataaattattcaa 34351480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 496 - 604
Target Start/End: Original strand, 42636402 - 42636510
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||||||||| ||| ||    
T  42636402 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtttaaaac 42636501  T
Q  596 aaaaaatta 604  Q
    |||||||||    
T  42636502 aaaaaatta 42636510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 44117072 - 44116912
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||  ||| ||||||||||||||||||| ||| ||||| |||    
T  44117072 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccactgcacaactttttgtcccacgtacaagttg 44116973  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  44116972 tctaaaatacaaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 44116912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 51259732 - 51259892
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  51259732 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttg 51259831  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||  ||||||||   ||||||| ||||| ||||||||||| ||||    
T  51259832 tctaaaataccaaaataacattttgtcccttaaaaatcatataaaacaaaaaattactcaa 51259892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 482 - 625
Target Start/End: Original strand, 33364763 - 33364906
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||| ||||||  ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||    
T  33364763 ggacaaaaactgatatttttgcccctcagcaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaa 33364862  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||||    
T  33364863 aaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 33364906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 47958417 - 47958544
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| |||  || ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  47958417 ggacaaaaactcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 47958516  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||| ||||    
T  47958517 aaatcgtataaaacaaaaaattactcaa 47958544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 604
Target Start/End: Complemental strand, 38213454 - 38213332
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   |||||||| ||||    
T  38213454 ggacaaaaactcatatttttgtcactcacgaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataccattttgtcccccaa 38213355  T
Q  582 aaatcgtataagacaaaaaatta 604  Q
    ||||||||||| |||||||||||    
T  38213354 aaatcgtataaaacaaaaaatta 38213332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 497 - 619
Target Start/End: Complemental strand, 44000346 - 44000224
Alignment:
Q  497 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagaca 596  Q
    ||||| |||||||||||| |||  ||||| |||||||| ||| ||||| || ||| |||||| |||||| | |||||||||||||||||||||||||||     
T  44000346 tttttttccctcactaaaccacatcacaattttttgtcccacgtacaagttatctgaaatacaaaaatagttttttgtccaccaaaaatcgtataagacc 44000247  T
Q  597 aaaaattattcaacatcataaaa 619  Q
    ||||||||||||| | |||||||    
T  44000246 aaaaattattcaataccataaaa 44000224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 49748897 - 49749023
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||| | ||||||||||||||  ||| |||| |||||    
T  49748897 gacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgttttaaataccaaaataacatttcgtcccccaaa 49748996  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||||||||    
T  49748997 aatcgtataaaacaaaaaattattcaa 49749023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 459 - 609
Target Start/End: Original strand, 54622758 - 54622908
Alignment:
Q  459 tgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatac 558  Q
    ||||||| || |||||| |||  |||||||||||   ||||||||| ||||| ||| |||  ||||||||||| || ||| ||||| |||||||||||||    
T  54622758 tgacaaactaaatgcaagggacaggacaaaaactcatatttttgtcgctcacgaaaccacaacacaactttttatcccacgtacaagttgtctaaaatac 54622857  T
Q  559 caaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||   ||| |||| ||||||||||||||| ||||||||||||||||    
T  54622858 caaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaa 54622908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 483 - 620
Target Start/End: Complemental strand, 34026766 - 34026629
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| |||  ||||| |||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  34026766 gacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 34026667  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||| ||||||||||| |||| | ||||||||    
T  34026666 aatcgtataaaacaaaaaattactcaataccataaaaa 34026629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 497 - 609
Target Start/End: Complemental strand, 5442376 - 5442264
Alignment:
Q  497 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagaca 596  Q
    |||||||||||||| ||||||| ||||||||||||||| ||| |||||  ||||||||||| |||||||   |||| |||  |||||||||||||| |||    
T  5442376 tttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagctgtctaaaatatcaaaatagcattttatccctcaaaaatcgtataaaaca 5442277  T
Q  597 aaaaattattcaa 609  Q
    |||||||||||||    
T  5442276 aaaaattattcaa 5442264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 12349123 - 12349283
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||| ||||| ||| ||| |||||||||| |||| ||| ||||| |||    
T  12349123 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttatgtcccacgtacaagttg 12349222  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  12349223 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 12349283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 482 - 637
Target Start/End: Complemental strand, 40094603 - 40094447
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||  ||| ||||||||||||||||||||||||||   ||||||||  |||    
T  40094603 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtttcacgtacaaattgtctaaaataccaaaatagcattttgtccctcaa 40094504  T
Q  582 aaatcgtataagacaaaaaattattcaacatcataaaaa-cttgtgatgtgttgttc 637  Q
    |||||| |||| ||||||||||| ||||   ||||||||  |||| |||||||||||    
T  40094503 aaatcgcataaaacaaaaaattactcaatgccataaaaattttgtcatgtgttgttc 40094447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 521 - 625
Target Start/End: Original strand, 41694925 - 41695029
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||||||| ||||||||| |||||||||||||  |||||   |||||||| ||||||||||||||| ||||||||||||||||  |||||||||    
T  41694925 cacaactttttgtcccacatacaagttgtctaaaatactgaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaa 41695024  T
Q  621 cttgt 625  Q
     ||||    
T  41695025 tttgt 41695029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 20255144 - 20255018
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||| ||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||    
T  20255144 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaacttcttgtcccac-tacaagttgtctaaaataccaaaataacattttgtccctcaa 20255046  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||| ||||| ||||||||||| ||||    
T  20255045 aaatcttataaaacaaaaaattactcaa 20255018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 21221345 - 21221472
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  21221345 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 21221444  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    |||| |||||| ||||||||||| ||||    
T  21221445 aaattgtataaaacaaaaaattactcaa 21221472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 26282372 - 26282499
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||| ||||  ||| ||| ||||||||||||||| ||| || || ||||||||||||||||||||   ||||||||  |||    
T  26282372 ggacaaaaacttatatttttgtctctcatcaaaccacagcacaactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtccctcaa 26282471  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| ||||||||||||||||    
T  26282472 aaatcgtataaaacaaaaaattattcaa 26282499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 29584975 - 29584848
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  29584975 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccttcaa 29584876  T
Q  582 aaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||| | ||||||||| ||||    
T  29584875 aaatcgtataaaataaaaaattactcaa 29584848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 4851455 - 4851568
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||  |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  4851455 atttttgtccctcaccaacccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 4851554  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||| ||||    
T  4851555 aaaaaattactcaa 4851568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 604
Target Start/End: Original strand, 25860407 - 25860528
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||| |||||   |||||| | |||||    
T  25860407 gacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaataccgaaatagcattttgttctccaaa 25860506  T
Q  583 aatcgtataagacaaaaaatta 604  Q
    |||||||||| |||||||||||    
T  25860507 aatcgtataaaacaaaaaatta 25860528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 496 - 601
Target Start/End: Complemental strand, 29646152 - 29646047
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||| |||||||||||||||   |||||||| ||||||||||||||| ||    
T  29646152 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtttaaaataccaaaatagcattttgtcccccaaaaatcgtataaaac 29646053  T
Q  596 aaaaaa 601  Q
    ||||||    
T  29646052 aaaaaa 29646047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 3864627 - 3864786
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||| | ||| |||  |||||||||||||| ||| ||||| |||    
T  3864627 ttcaggtacaagacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttg 3864726  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||||||||||   |||||||| ||||||||| ||||| ||||||||||| ||||    
T  3864727 tctaaaataccaaaatagcattttgtcc-ccaaaaatcatataaaacaaaaaattactcaa 3864786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 24571414 - 24571254
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||  ||||| |||    
T  24571414 ttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttg 24571315  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||   |||||||| |||||||||| |||| |||| |||||| ||||    
T  24571314 tctaaaatacaaaaataggattttgtcccccaaaaatcgaataaaacaacaaattactcaa 24571254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 482 - 602
Target Start/End: Original strand, 25927312 - 25927432
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 581  Q
    |||||||||||   |||||||||||| || ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||||  |||||| |  |||    
T  25927312 ggacaaaaactcatatttttgtcccttaccaaaacacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgttcctcaa 25927411  T
Q  582 aaatcgtataagacaaaaaat 602  Q
    ||||||||||| |||||||||    
T  25927412 aaatcgtataaaacaaaaaat 25927432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 483 - 625
Target Start/End: Complemental strand, 25954549 - 25954408
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||| ||||| |||| || ||||||||||||||| |||||| || |||| |||||||| || ||||  ||| |||| |||||    
T  25954549 gacaaaaactcatatttttgtctctcaccaaattacagcacaactttttgtctcacatataagttgtttaaaatactaatataacatttcgtcc-ccaaa 25954451  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    || ||||||| | |||||||||||||| |||||||||| ||||    
T  25954450 aagcgtataaaataaaaaattattcaatatcataaaaatttgt 25954408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 584
Target Start/End: Original strand, 14155447 - 14155547
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    |||||||||| ||| |||| |||||||||||||||   |||||||||||||| ||  ||||| |||||||||||| |||||||||||||||||||| |||    
T  14155447 gacaaaaact-gaaattttatccctcactaaatcataacacaactttttgtctcaagtacaagttgtctaaaatatcaaaataatcttttgtccacaaaa 14155545  T
Q  583 aa 584  Q
    ||    
T  14155546 aa 14155547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 565
Target Start/End: Complemental strand, 19906895 - 19906779
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||  ||||| | || |||| |||  |||||||||||  |||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  19906895 ttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttg 19906796  T
Q  549 tctaaaataccaaaata 565  Q
    ||||||| |||||||||    
T  19906795 tctaaaacaccaaaata 19906779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 619
Target Start/End: Complemental strand, 51296714 - 51296544
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  ||||| ||||||||  |  ||||| |||    
T  51296714 ttcaggtacaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcctaagtacaagttg 51296615  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||||||| ||||||   |||||||| | ||||||||||||| ||||||||||| |||| | |||||||    
T  51296614 tctaaaatacaaaaatagcattttgtccccaaaaaatcgtataaaacaaaaaattactcaataccataaaa 51296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 50386455 - 50386568
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    |||||||| |||||  ||| ||| |||||||||||||||  || ||||| |||||||||||| |||||||   |||||| | |||||||| |||||| ||    
T  50386455 atttttgtgcctcaacaaaccacagcacaactttttgtcctacgtacaagttgtctaaaatatcaaaatagcattttgttccccaaaaattgtataaaac 50386554  T
Q  596 aaaaaattattcaa 609  Q
    ||||||||||||||    
T  50386555 aaaaaattattcaa 50386568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 495 - 637
Target Start/End: Original strand, 28624918 - 28625059
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    ||||||||||||||| |||| |||  || || ||||||||  || || || || |||||||||| ||||| || ||| ||| |||||||||| |||||||    
T  28624918 aatttttgtccctcattaaagcacaacataaatttttgtcctacgtataagttatctaaaatacaaaaatcat-tttagtctaccaaaaatcttataaga 28625016  T
Q  595 caaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    ||||||||||||||| | |||||||  ||||  ||||||||||    
T  28625017 caaaaaattattcaataccataaaagtttgtcttgtgttgttc 28625059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 32621924 - 32621842
Alignment:
Q  527 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||||| ||  ||||| |||||||||||||||||||||| | ||||||| ||||||| |||||  ||||||||||||||||    
T  32621924 tttttgtcccatgtacaagttgtctaaaataccaaaataatatgttgtccatcaaaaattgtatacaacaaaaaattattcaa 32621842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 565
Target Start/End: Complemental strand, 21374016 - 21373947
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 565  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||    
T  21374016 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaata 21373947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 546 - 630
Target Start/End: Complemental strand, 389479 - 389396
Alignment:
Q  546 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgt 630  Q
    |||||||||||||||||||| |||||| |||| | |||||||| || ||||||||| | |||||||||||||||  |||||||||    
T  389479 ttgtctaaaataccaaaatagtcttttatccatccaaaatcgtgtaggacaaaaaa-tgttcaacatcataaaagtttgtgatgt 389396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 609
Target Start/End: Original strand, 3695316 - 3695404
Alignment:
Q  521 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||| ||||||| ||| ||||| |||||||||||||||||||| | |||| ||| |||||||| |||||| |||| |||||| ||||    
T  3695316 cacaaccttttgtcccacgtacaagttgtctaaaataccaaaatagtattttatcccccaaaaattgtataaaacaacaaattactcaa 3695404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 534 - 625
Target Start/End: Complemental strand, 10747266 - 10747174
Alignment:
Q  534 cacacatacaaattgtctaaaataccaaaataatcttttgtccacc-aaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||| ||||| |||||||||||| |||||||   |||||||| || ||||||||||||| ||||||||||||||||  ||||||||| ||||    
T  10747266 cacacgtacaagttgtctaaaatatcaaaatagcattttgtccccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 10747174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 729 - 821
Target Start/End: Original strand, 18267964 - 18268056
Alignment:
Q  729 gcaccaacagctctgatcaaaggtgtttccagtgtccgacacgacactctcacatgtgattgcgttcaaataattcattttctcaaattatta 821  Q
    ||||| ||| |||||||||||||||  |||  ||||| |||| ||||   ||||||||||| ||||||| |||||||||||||||||||||||    
T  18267964 gcaccgacacctctgatcaaaggtgcatccgatgtccaacacaacaccgacacatgtgattacgttcaattaattcattttctcaaattatta 18268056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 482 - 565
Target Start/End: Complemental strand, 50678898 - 50678815
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 565  Q
    |||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||    
T  50678898 ggacaaaaactgatatttttgtctctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaata 50678815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 524 - 606
Target Start/End: Complemental strand, 44267800 - 44267718
Alignment:
Q  524 aactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 606  Q
    |||||||| || ||||||||||||||||||||||| ||||||   ||| |||  ||||||||| ||||| |||||||||||||    
T  44267800 aactttttatcccacatacaaattgtctaaaatacaaaaatagcatttcgtcatccaaaaatcatataaaacaaaaaattatt 44267718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 495 - 633
Target Start/End: Complemental strand, 49107273 - 49107135
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    |||| ||||||  ||||||| |||  || |||||||||| ||   |||||||||| ||||||||||||||| ||||   ||||||||| || ||||||||    
T  49107273 aattcttgtccaccactaaaccacatcataactttttgttactactacaaattgtttaaaataccaaaatagtcttggatccaccaaacatagtataaga 49107174  T
Q  595 caaaaaattattcaacatcataaaaacttgtgatgtgtt 633  Q
    ||||||||| ||| | |||||| ||  |||| |||||||    
T  49107173 caaaaaattgttcgatatcatataagtttgtcatgtgtt 49107135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 546 - 619
Target Start/End: Complemental strand, 25395650 - 25395577
Alignment:
Q  546 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||||||||||||||||||  |||||| ||| ||||||||||||| ||||||||| || |||  ||||||||    
T  25395650 ttgtctaaaataccaaaataacattttgttcactaaaaatcgtataaaacaaaaaataatgcaatgtcataaaa 25395577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 619
Target Start/End: Original strand, 8067055 - 8067179
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    ||||| ||||| |||| ||||||  | ||||||||||||||||| ||||| || | ||||||| |||||||   |||||||||| | ||||| |||||||    
T  8067055 aatttgtgtccttcacaaaatcatagtacaactttttgtcacacgtacaagttatataaaatatcaaaatagctttttgtccactagaaatcatataaga 8067154  T
Q  595 caaaaaattattcaacatcataaaa 619  Q
      |||||| |||||| | |||||||    
T  8067155 tcaaaaatcattcaataccataaaa 8067179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 637
Target Start/End: Original strand, 16145873 - 16145961
Alignment:
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    |||||||||| |||||| | |||||||||||||||||| || ||||  |||| |||||||| | |||||| | |||| |||||||||||    
T  16145873 tctaaaatacaaaaatagttttttgtccaccaaaaatcatacaagaacaaaacttattcaaaaccataaatatttgtcatgtgttgttc 16145961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 449 - 625
Target Start/End: Original strand, 22484695 - 22484871
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||||||||| | || |||| |||   ||||||| ||| ||||||||| |||  | |||  ||  |||||||||||||| ||| || || |||    
T  22484695 ttcagggacatgacaaactggaggcaagggacatgacaaaagctacaatttttgttccttgccaaactacaacacaactttttgtcccacgtataagttg 22484794  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    |||||||||| ||||||   ||| |||  ||||||||  ||||| ||| |||||||||||| | |||||||| ||||    
T  22484795 tctaaaatacaaaaatagcatttcgtcacccaaaaattatataatacagaaaattattcaataccataaaaatttgt 22484871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 529 - 592
Target Start/End: Complemental strand, 19190716 - 19190653
Alignment:
Q  529 tttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataa 592  Q
    |||||| ||||||||| || |||||||||| |||||| | ||||| ||||||||||||||||||    
T  19190716 tttgtctcacatacaagttatctaaaatacaaaaatagttttttgaccaccaaaaatcgtataa 19190653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 779 - 822
Target Start/End: Complemental strand, 21768656 - 21768613
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  21768656 cacatgtggttacgttcaaataattcattttctcaaattattac 21768613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 482 - 565
Target Start/End: Complemental strand, 24721585 - 24721502
Alignment:
Q  482 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 565  Q
    |||||||||||| |||||| || |||||  ||| |||  ||||||||||| || ||||||||| |||||||||| |||||||||    
T  24721585 ggacaaaaactaaaattttggtacctcaacaaaccacaacacaactttttatcccacatacaagttgtctaaaacaccaaaata 24721502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 548 - 603
Target Start/End: Original strand, 32538586 - 32538641
Alignment:
Q  548 gtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatt 603  Q
    |||||||||| ||||||||||||||||||| |||| || |||||||| ||||||||    
T  32538586 gtctaaaatatcaaaataatcttttgtccatcaaatattgtataagataaaaaatt 32538641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 537 - 619
Target Start/End: Original strand, 47041559 - 47041644
Alignment:
Q  537 acatacaaattgtctaaaataccaaaataa---tcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    ||||||||||||||||||||||||||||||   || |||||| ||| |||||  ||| ||| |||||| ||||||| |||||||||    
T  47041559 acatacaaattgtctaaaataccaaaataatagtcatttgtctaccgaaaattttatgagataaaaaactattcaatatcataaaa 47041644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 603
Target Start/End: Complemental strand, 51813449 - 51813371
Alignment:
Q  525 actttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatt 603  Q
    |||||||||  || |||||| |||| ||||||||||||||||  |||||||  || |||||| ||||||||||||||||    
T  51813449 actttttgttccaaatacaagttgtataaaataccaaaataacattttgtctgccgaaaatcttataagacaaaaaatt 51813371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 609
Target Start/End: Original strand, 45690924 - 45691012
Alignment:
Q  520 gcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||| |||  | || |||||||||||||||||||    ||| |||| ||||||||||||||| || |||||||||||||    
T  45690924 gcacaactttttgtctcacgcataagttgtctaaaataccaaaatcgcatttcgtcctccaaaaatcgtataaaac-aaaaattattcaa 45691012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 609
Target Start/End: Original strand, 53046692 - 53046753
Alignment:
Q  548 gtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    ||||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  53046692 gtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 53046753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 560 - 620
Target Start/End: Complemental strand, 30258895 - 30258835
Alignment:
Q  560 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||| ||||||||| || |||||||||||||||| |||||||||| || | ||||||||    
T  30258895 aaaatagtcttttgtctacaaaaaatcgtataagaccaaaaattattgaataccataaaaa 30258835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 779 - 822
Target Start/End: Complemental strand, 47542585 - 47542542
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    ||||||||||| | |||||||| |||||||||||||||||||||    
T  47542585 cacatgtgattacattcaaatagttcattttctcaaattattac 47542542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 781 - 822
Target Start/End: Original strand, 49636837 - 49636878
Alignment:
Q  781 catgtgattgcgttcaaataattcattttctcaaattattac 822  Q
    ||||||||| | ||||| ||||||||||||||||||||||||    
T  49636837 catgtgattacattcaattaattcattttctcaaattattac 49636878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 495 - 619
Target Start/End: Original strand, 33554 - 33678
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    |||| ||||||||||  ||| |||  |||||||||||||| ||| |||||||||| |||||||||||||||  |||||||||| ||||| | ||||||||    
T  33554 aattcttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgtataaaataccaaaataggcttttgtccatcaaaacttgtataaga 33653  T
Q  595 caaaaaattattcaacatcataaaa 619  Q
    | ||||||||||||| |||||||||    
T  33654 ccaaaaattattcaatatcataaaa 33678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 483 - 637
Target Start/End: Original strand, 1641 - 1795
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  |||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||| |||||||||   ||| ||||  ||||    
T  1641 gacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaaaaccaaaatagcatttcgtccctcaaa 1740  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 637  Q
    | || ||||| |||||||||||||||| | |||||||| ||||  ||||||||||    
T  1741 agtcatataaaacaaaaaattattcaataccataaaaatttgttctgtgttgttc 1795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 483 - 620
Target Start/End: Complemental strand, 51536 - 51400
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   ||||||||  ||||    
T  51536 gacaaaaactcatatttttgtccctcac-aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaa 51438  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||| ||||||||||| ||||  |||||||||    
T  51437 aatcgtataaaacaaaaaattactcaatgtcataaaaa 51400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 496 - 625
Target Start/End: Original strand, 5451 - 5580
Alignment:
Q  496 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 595  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||||||||| ||| ||||||||| |||||||  ||| |  | ||||||||||||||| ||    
T  5451 atttttgtccctcaccaaaccacatcacaactttttgtcccacatacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaac 5550  T
Q  596 aaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||||||||||  ||||||||| ||||    
T  5551 aaaaaattattcaatgtcataaaaatttgt 5580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 625
Target Start/End: Original strand, 13651 - 13827
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    ||||||||||  ||||| | || |||| |||| |||||||||||  |||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| |||    
T  13651 ttcagggacagaacaaactggaggcaagggataggacaaaaactgaaatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttg 13750  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 625  Q
    ||||||| |||||||||   ||  |||| ||||||| | ||||| |||| ||||||||||| | |||||||| ||||    
T  13751 tctaaaacaccaaaatagcattccgtcccccaaaaagcatataaaacaagaaattattcaataccataaaaatttgt 13827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 102047 - 101921
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||   |||    
T  102047 gacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaa 101948  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  101947 aatcgtataaaacaaaaaattactcaa 101921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 372962 - 373088
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| ||   |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  372962 gacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtcccacgtacaagttgtctaaaataccaaaatatcattttgtccctcaaa 373061  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  373062 aatcgtataaaacaaaaaattactcaa 373088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 483 - 634
Target Start/End: Complemental strand, 20005 - 19854
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  |||| ||||| ||||||||| ||||| ||||||||||||  ||| ||||| |||| | ||||||||||||| |||||||| || ||||    
T  20005 gacaaaaactgaaattcttgtcactcactaaaccactgtacaactttttgtttcacgtacaagttgtttgaaataccaaaatagtcttttgttcatcaaa 19906  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttg 634  Q
    ||||| ||||  | ||| ||||||||| | |||||||  |||| ||||||||    
T  19905 aatcgcataacgccaaatattattcaataccataaaagtttgtcatgtgttg 19854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 23673 - 23549
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   |||||||||| |||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||    ||||||  ||||    
T  23673 gacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataa--cattgtccctcaaa 23576  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||||||||| ||||||||||| ||||    
T  23575 aatcgtataaaacaaaaaattactcaa 23549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 51; Significance: 9e-20; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 495 - 609
Target Start/End: Original strand, 13589 - 13703
Alignment:
Q  495 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 594  Q
    ||||| |||| |||||||||  ||  |||||||||||||||||  ||||| ||||||| |||||||||||| | ||||||||| ||||||||||||||||    
T  13589 aatttgtgtctctcactaaaatacgacacaactttttgtcacatgtacaagttgtctagaataccaaaatagtattttgtccatcaaaaatcgtataaga 13688  T
Q  595 caaaaaattattcaa 609  Q
    | || ||||| ||||    
T  13689 ccaataattaatcaa 13703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 483 - 620
Target Start/End: Original strand, 15379 - 15512
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||  ||||| ||||||||||||||||||||   |||    |  ||||    
T  15379 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattt----cctcaaa 15474  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaaa 620  Q
    |||||||||| ||||||||||| ||||  |||||||||    
T  15475 aatcgtataaaacaaaaaattactcaatgtcataaaaa 15512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 15270 - 15144
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||   ||||||||||| ||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||| |||||| | |||||||| |||||    
T  15270 gacaaaaactcatatttttgtcccccaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatactaaaatagtattttgtcccccaaa 15171  T
Q  583 aatcgtataagacaaaaaattattcaa 609  Q
    |||| ||||| |||| |||||| ||||    
T  15170 aatcttataaaacaacaaattactcaa 15144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 619
Target Start/End: Original strand, 108303 - 108436
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||| | || |||||||  |||||||| |||   ||||||||||||| ||  | ||||||||||||| |||||||||||    || |||| ||||    
T  108303 gacaaaaaccaaaaattttgtcattcactaaagcacaatacaactttttgtctcaagtgcaaattgtctaaagtaccaaaataac---ttatccatcaaa 108399  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||||||||||| |||||||||||| |||||||||    
T  108400 aatcgtataagacataaaattattcaatatcataaaa 108436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 619
Target Start/End: Original strand, 111073 - 111206
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 582  Q
    ||||||||||  ||||||||||  |||||||| |||   | ||||||||||| ||  | |||||| |||||| |||||||||||    || |||||||||    
T  111073 gacaaaaactgaaatttttgtcattcactaaagcacaatagaactttttgtctcaagtgcaaattatctaaagtaccaaaataac---ttatccaccaaa 111169  T
Q  583 aatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||||||||||| |||||||||||| |||||||||    
T  111170 aatcgtataagacataaaattattcaatatcataaaa 111206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 449 - 637
Target Start/End: Original strand, 2460 - 2648
Alignment:
Q  449 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 548  Q
    |||||| ||| |||||||| || | || |||  |||||||||||   || ||||||||| || ||| |||  ||||||| || ||| ||| ||||| |||    
T  2460 ttcaggtacaagacaaattggaggaaagggacaggacaaaaactcatatctttgtccctaaccaaaccacaacacaactatt-gtctcacgtacaagttg 2558  T
Q  549 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 637  Q
    |||||||||||||||||   |||||||| ||||||||||||||| |||||||||||  |||  |||| ||||| |||| |||||||||||    
T  2559 tctaaaataccaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattacccaatctcataaaaaatttgtcatgtgttgttc 2648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 539 - 619
Target Start/End: Original strand, 3682 - 3762
Alignment:
Q  539 atacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||| || |||||||||| |||||| | |||| ||||||||||||| ||||||| |||||||||||||| |||||||||    
T  3682 atacaagttatctaaaatacaaaaatagttttttatccaccaaaaatcatataagataaaaaattattcaatatcataaaa 3762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 461 - 609
Target Start/End: Original strand, 4555 - 4703
Alignment:
Q  461 acaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacca 560  Q
    ||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| || || |||||||||| | ||    
T  4555 acaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacatca 4654  T
Q  561 aaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 609  Q
    |||||   |||||||    ||||||||||||| ||||||||||| ||||    
T  4655 aaatatcattttgtctctaaaaaatcgtataaaacaaaaaattactcaa 4703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 7456 - 7586
Alignment:
Q  483 gacaaaaactagaatttttgtccctcactaaatcactgcacaac---tttttgtcacacatacaaattgtctaaaataccaaaata-atcttttgtccac 578  Q
    ||||||||||  |||| ||||| |||||||||||||  |||||    |||||||| ||| ||| | |||||||||||||||||||| || |||||||||     
T  7456 gacaaaaactgaaattcttgtctctcactaaatcacaacacaagatttttttgtctcacgtacgagttgtctaaaataccaaaatagattttttgtccat 7555  T
Q  579 caaaaatcgtataagacaaaaaattattcaa 609  Q
     ||||||  |||||||| |||||||||||||    
T  7556 taaaaattatataagaccaaaaattattcaa 7586  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 609
Target Start/End: Original strand, 42949 - 43073
Alignment:
Q  484 acaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaa 583  Q
    |||||||||  ||||| |||||||||| ||| |||  |||||||||||||| ||| ||| |||||||||||| |||||||||   | |||||| | || |    
T  42949 acaaaaactgaaatttgtgtccctcaccaaaccacaacacaactttttgtcccacgtac-aattgtctaaaacaccaaaatagcatgttgtccccaaaca 43047  T
Q  584 atcgtataagacaaaaaattattcaa 609  Q
    ||| ||||| |||| |||||||||||    
T  43048 atcatataaaacaagaaattattcaa 43073  T

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Target: scaffold0330 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 779 - 821
Target Start/End: Complemental strand, 4404 - 4362
Alignment:
Q  779 cacatgtgattgcgttcaaataattcattttctcaaattatta 821  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  4404 cacatgtgattgtgtttaaataattcattttctcaaattatta 4362  T

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Target: scaffold0236 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 543 - 619
Target Start/End: Complemental strand, 19860 - 19784
Alignment:
Q  543 aaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 619  Q
    |||||||||||||| | |||||| | |||||| | | |||||||||| |||||||||||||||| |  |||||||||    
T  19860 aaattgtctaaaattcaaaaatagttttttgtacgcaaaaaatcgtacaagacaaaaaattatttagtatcataaaa 19784  T

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