View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21514_high_9 (Length: 241)
Name: NF21514_high_9
Description: NF21514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21514_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 2368364 - 2368167
Alignment:
| Q |
23 |
cacagaacaatcaaaagcctatcagaaacaagagtcacacaaatacacattcacacttacacttacacttccactgtcttttgaggtttgaaccaaacat |
122 |
Q |
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| T |
2368364 |
cacagaacaatcaaaagcctatcagaaacaagagtcacacaaatacacattcacacttacacttacacttccactgtcttttgaggtttgaaccaaacat |
2368265 |
T |
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| Q |
123 |
catcagaagcatccatggcagccaccactagagccataaccatagccagcaactcaacctacactcttcttggtaagaaaccatttctgggtggtcgt |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2368264 |
catcagaagcatccatggcagccaccactagagccataaccatagccagcaactcaacctacactcttcttggtaagaaaccatttctgggtggtcgt |
2368167 |
T |
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