View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21514_low_12 (Length: 236)
Name: NF21514_low_12
Description: NF21514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21514_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 40063718 - 40063507
Alignment:
| Q |
9 |
acatcatcaaagcaaagttagtaccaattccaaccccagcctgcagatgagtgagttttgccaaactagcacgcctcaatataaactgtcccactccctt |
108 |
Q |
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| T |
40063718 |
acatcatcaaagcaaagttagtaccaattccaaccccagcctgcagatgagtgagttttgccaaactagcacgcctcaatataaactgtcccactccctt |
40063619 |
T |
|
| Q |
109 |
cacatgtccttcactctctaccatcctttcatcccatacttttctcggttcaccccctcactccactattgcaaataaatcatcttaatacccacataac |
208 |
Q |
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| T |
40063618 |
cacatgtccttcactctctaccatcctttcatcccatacttttctctgttca-cccctcactccactattgcaaataaaccatcttaatacccacataac |
40063520 |
T |
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| Q |
209 |
aattcatatcatc |
221 |
Q |
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||||||||||||| |
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| T |
40063519 |
aattcatatcatc |
40063507 |
T |
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