View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21514_low_2 (Length: 688)

Name: NF21514_low_2
Description: NF21514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21514_low_2
NF21514_low_2
[»] chr1 (113 HSPs)
chr1 (18-397)||(1815190-1815558)
chr1 (481-672)||(1816189-1816380)
chr1 (481-672)||(1856664-1856855)
chr1 (200-344)||(47989484-47989627)
chr1 (192-369)||(32461385-32461561)
chr1 (198-344)||(6427447-6427596)
chr1 (199-338)||(9828036-9828175)
chr1 (200-347)||(18556385-18556532)
chr1 (202-347)||(1486646-1486785)
chr1 (199-347)||(40917734-40917880)
chr1 (18-139)||(1843475-1843595)
chr1 (18-139)||(1857486-1857606)
chr1 (18-139)||(1869084-1869204)
chr1 (199-312)||(31694638-31694751)
chr1 (223-347)||(6612123-6612247)
chr1 (484-641)||(1868290-1868447)
chr1 (200-344)||(5944267-5944413)
chr1 (202-322)||(17778557-17778670)
chr1 (248-345)||(28273065-28273162)
chr1 (199-346)||(37598816-37598951)
chr1 (272-344)||(22881617-22881689)
chr1 (267-362)||(1704988-1705083)
chr1 (267-344)||(24577182-24577259)
chr1 (201-332)||(40258874-40258994)
chr1 (200-347)||(46348323-46348459)
chr1 (139-199)||(19326856-19326916)
chr1 (199-339)||(25934607-25934747)
chr1 (232-347)||(6414963-6415077)
chr1 (232-343)||(27471527-27471638)
chr1 (272-347)||(42359450-42359525)
chr1 (266-340)||(113289-113363)
chr1 (487-644)||(9218929-9219086)
chr1 (232-310)||(9629861-9629939)
chr1 (200-347)||(22515827-22515963)
chr1 (200-335)||(25361881-25362012)
chr1 (484-644)||(9200410-9200570)
chr1 (201-349)||(21032188-21032335)
chr1 (484-655)||(1842667-1842838)
chr1 (273-344)||(13997869-13997940)
chr1 (200-317)||(18337342-18337448)
chr1 (272-362)||(31672896-31672987)
chr1 (272-343)||(38078662-38078733)
chr1 (199-269)||(5898205-5898275)
chr1 (272-346)||(9103624-9103697)
chr1 (254-347)||(5376483-5376576)
chr1 (250-310)||(44482250-44482310)
chr1 (272-339)||(19058857-19058924)
chr1 (241-312)||(30173732-30173803)
chr1 (276-347)||(48450592-48450663)
chr1 (289-347)||(398783-398841)
chr1 (432-486)||(1815120-1815174)
chr1 (199-347)||(2896060-2896197)
chr1 (200-270)||(18190048-18190118)
chr1 (244-310)||(34371733-34371799)
chr1 (206-311)||(6332689-6332794)
chr1 (601-650)||(9162134-9162183)
chr1 (254-343)||(10572572-10572661)
chr1 (200-281)||(17408740-17408821)
chr1 (275-347)||(48040465-48040538)
chr1 (484-644)||(9118275-9118435)
chr1 (223-358)||(12611935-12612073)
chr1 (202-270)||(29163323-29163391)
chr1 (272-344)||(36878447-36878519)
chr1 (272-312)||(51410043-51410083)
chr1 (238-302)||(52284731-52284794)
chr1 (200-311)||(15449170-15449272)
chr1 (199-322)||(16164243-16164366)
chr1 (292-347)||(16812526-16812581)
chr1 (200-343)||(19562556-19562693)
chr1 (277-344)||(30359374-30359441)
chr1 (276-347)||(31015026-31015097)
chr1 (484-650)||(9170843-9171009)
chr1 (273-347)||(21378561-21378635)
chr1 (273-346)||(32434718-32434792)
chr1 (601-642)||(9156222-9156263)
chr1 (601-650)||(9178942-9178991)
chr1 (484-669)||(9229811-9229996)
chr1 (197-270)||(43492431-43492504)
chr1 (202-266)||(16297223-16297287)
chr1 (205-265)||(26830641-26830701)
chr1 (199-254)||(9690212-9690267)
chr1 (276-347)||(10577740-10577811)
chr1 (144-202)||(19330311-19330370)
chr1 (200-271)||(27965940-27966011)
chr1 (265-312)||(35919270-35919317)
chr1 (205-268)||(40181922-40181984)
chr1 (202-249)||(42359391-42359438)
chr1 (223-270)||(51410074-51410121)
chr1 (200-250)||(2218297-2218347)
chr1 (266-312)||(8117052-8117098)
chr1 (289-347)||(12443478-12443536)
chr1 (278-344)||(14359529-14359594)
chr1 (200-246)||(16812629-16812675)
chr1 (262-340)||(17754301-17754379)
chr1 (363-393)||(19326909-19326939)
chr1 (289-347)||(34298419-34298477)
chr1 (201-270)||(5927281-5927350)
chr1 (279-343)||(13011223-13011288)
chr1 (286-347)||(15641045-15641106)
chr1 (277-322)||(18190114-18190159)
chr1 (275-312)||(18471318-18471355)
chr1 (290-343)||(21366039-21366092)
chr1 (267-347)||(6427333-6427413)
chr1 (223-259)||(6427595-6427631)
chr1 (272-312)||(21620973-21621013)
chr1 (272-312)||(28663626-28663666)
chr1 (272-316)||(30749854-30749898)
chr1 (272-316)||(30771305-30771349)
chr1 (202-266)||(33202956-33203020)
chr1 (199-266)||(34741899-34741966)
chr1 (272-364)||(39953147-39953239)
chr1 (140-199)||(40524962-40525022)
chr1 (272-344)||(41877471-41877543)
[»] chr7 (84 HSPs)
chr7 (481-662)||(37567616-37567797)
chr7 (200-345)||(24339627-24339772)
chr7 (199-343)||(7438693-7438837)
chr7 (200-347)||(43027404-43027545)
chr7 (199-345)||(5409770-5409910)
chr7 (200-338)||(25822647-25822785)
chr7 (202-322)||(26033392-26033512)
chr7 (237-339)||(11665406-11665508)
chr7 (253-344)||(9408316-9408407)
chr7 (200-270)||(598257-598327)
chr7 (199-317)||(9778513-9778625)
chr7 (205-347)||(13770674-13770810)
chr7 (232-365)||(32308079-32308218)
chr7 (200-312)||(32093954-32094061)
chr7 (200-312)||(2334268-2334379)
chr7 (208-344)||(6630849-6630985)
chr7 (220-312)||(21560521-21560613)
chr7 (267-347)||(27945024-27945104)
chr7 (254-342)||(11272569-11272659)
chr7 (200-270)||(21880201-21880271)
chr7 (219-344)||(15902808-15902933)
chr7 (272-345)||(25481887-25481960)
chr7 (243-344)||(26329354-26329455)
chr7 (271-347)||(11061076-11061152)
chr7 (197-345)||(15680794-15680931)
chr7 (262-312)||(18039017-18039067)
chr7 (200-270)||(21864857-21864927)
chr7 (272-332)||(3991322-3991382)
chr7 (267-347)||(18215182-18215262)
chr7 (201-304)||(4794915-4795018)
chr7 (276-347)||(24105661-24105732)
chr7 (272-322)||(19213811-19213861)
chr7 (200-250)||(21568561-21568611)
chr7 (271-361)||(23191865-23191955)
chr7 (224-310)||(27229264-27229350)
chr7 (261-322)||(13300418-13300479)
chr7 (201-270)||(22484074-22484143)
chr7 (201-270)||(32287404-32287473)
chr7 (200-347)||(1433437-1433578)
chr7 (272-344)||(7197298-7197370)
chr7 (272-344)||(8234132-8234204)
chr7 (272-347)||(18213034-18213110)
chr7 (266-342)||(22602705-22602781)
chr7 (271-343)||(33994199-33994271)
chr7 (205-347)||(43249976-43250118)
chr7 (223-350)||(21930609-21930735)
chr7 (272-343)||(35861951-35862022)
chr7 (220-322)||(6028633-6028735)
chr7 (200-258)||(29763129-29763187)
chr7 (200-277)||(38804489-38804567)
chr7 (204-254)||(40287306-40287356)
chr7 (280-344)||(13557750-13557817)
chr7 (218-347)||(19206033-19206162)
chr7 (272-365)||(28155535-28155628)
chr7 (256-344)||(3520327-3520415)
chr7 (215-347)||(18013018-18013150)
chr7 (275-343)||(40287361-40287428)
chr7 (289-332)||(1656674-1656717)
chr7 (200-270)||(7133212-7133283)
chr7 (207-250)||(18215144-18215187)
chr7 (289-344)||(22868028-22868083)
chr7 (272-347)||(26733287-26733362)
chr7 (223-270)||(33994261-33994308)
chr7 (200-323)||(38134335-38134458)
chr7 (199-268)||(1401076-1401143)
chr7 (200-270)||(5835296-5835366)
chr7 (193-259)||(17852060-17852126)
chr7 (200-270)||(18212973-18213043)
chr7 (222-339)||(21831768-21831883)
chr7 (200-250)||(40131939-40131989)
chr7 (289-343)||(41020483-41020537)
chr7 (271-316)||(640127-640172)
chr7 (255-312)||(1885591-1885648)
chr7 (271-344)||(5835233-5835306)
chr7 (200-249)||(6490786-6490835)
chr7 (266-327)||(7058429-7058490)
chr7 (271-344)||(22484011-22484084)
chr7 (227-304)||(22801697-22801774)
chr7 (200-257)||(24105740-24105797)
chr7 (196-249)||(35749957-35750010)
chr7 (254-347)||(37742506-37742599)
chr7 (271-312)||(48438564-48438605)
chr7 (200-252)||(14729770-14729822)
chr7 (272-344)||(21826259-21826331)
[»] chr8 (84 HSPs)
chr8 (200-349)||(15816058-15816207)
chr8 (200-347)||(22651959-22652106)
chr8 (199-347)||(29510232-29510380)
chr8 (201-338)||(29447040-29447177)
chr8 (199-344)||(4673353-4673498)
chr8 (199-344)||(8343302-8343447)
chr8 (232-347)||(2572017-2572132)
chr8 (200-347)||(36450694-36450830)
chr8 (200-307)||(29447467-29447574)
chr8 (199-344)||(22197670-22197815)
chr8 (200-322)||(21465420-21465542)
chr8 (272-347)||(20873052-20873127)
chr8 (200-310)||(26902104-26902214)
chr8 (200-322)||(28745506-28745628)
chr8 (199-349)||(5813573-5813712)
chr8 (261-345)||(13436954-13437038)
chr8 (138-197)||(11686012-11686071)
chr8 (200-335)||(11927015-11927150)
chr8 (279-349)||(41838131-41838201)
chr8 (200-337)||(11944658-11944795)
chr8 (200-312)||(24858030-24858135)
chr8 (139-199)||(44206277-44206337)
chr8 (272-347)||(18170483-18170558)
chr8 (272-347)||(18634051-18634126)
chr8 (272-343)||(22595981-22596052)
chr8 (267-346)||(30271287-30271366)
chr8 (141-199)||(19177405-19177463)
chr8 (277-343)||(41831946-41832012)
chr8 (261-322)||(25566849-25566910)
chr8 (202-270)||(926730-926798)
chr8 (272-344)||(4786339-4786411)
chr8 (200-344)||(18964163-18964309)
chr8 (203-343)||(24727684-24727826)
chr8 (274-349)||(25192350-25192425)
chr8 (200-333)||(27067231-27067360)
chr8 (271-342)||(31556985-31557055)
chr8 (271-337)||(4298886-4298952)
chr8 (272-322)||(4948660-4948710)
chr8 (200-310)||(11803279-11803389)
chr8 (220-310)||(12570458-12570547)
chr8 (254-347)||(28384977-28385070)
chr8 (200-360)||(6065586-6065746)
chr8 (220-268)||(12570684-12570732)
chr8 (261-349)||(14692441-14692528)
chr8 (271-349)||(22204620-22204700)
chr8 (237-344)||(24362167-24362275)
chr8 (200-347)||(34450961-34451113)
chr8 (202-344)||(44067502-44067644)
chr8 (200-271)||(14134747-14134818)
chr8 (277-344)||(18407705-18407772)
chr8 (212-259)||(22943301-22943348)
chr8 (142-197)||(31343660-31343715)
chr8 (272-363)||(34897052-34897143)
chr8 (200-270)||(3951476-3951546)
chr8 (139-197)||(4863904-4863962)
chr8 (272-322)||(8342980-8343030)
chr8 (199-249)||(8343037-8343087)
chr8 (272-342)||(24613509-24613578)
chr8 (200-265)||(16641909-16641974)
chr8 (272-345)||(30077388-30077461)
chr8 (223-268)||(31557047-31557092)
chr8 (273-310)||(40332211-40332248)
chr8 (205-257)||(14639735-14639787)
chr8 (202-270)||(20679337-20679405)
chr8 (272-344)||(24669419-24669491)
chr8 (296-347)||(3677769-3677820)
chr8 (302-349)||(24196628-24196675)
chr8 (273-312)||(31514891-31514930)
chr8 (200-255)||(39820493-39820547)
chr8 (223-270)||(44462158-44462205)
chr8 (223-270)||(44469691-44469738)
chr8 (363-393)||(19177456-19177486)
chr8 (271-349)||(20679395-20679473)
chr8 (200-270)||(24413499-24413569)
chr8 (199-249)||(27213595-27213645)
chr8 (363-393)||(44206254-44206284)
chr8 (201-310)||(2035759-2035866)
chr8 (198-255)||(38487155-38487212)
chr8 (202-270)||(3025600-3025668)
chr8 (272-344)||(13844597-13844669)
chr8 (199-259)||(18407779-18407839)
chr8 (289-317)||(22493507-22493535)
chr8 (267-323)||(31548289-31548345)
chr8 (203-259)||(40332251-40332307)
[»] chr5 (65 HSPs)
chr5 (200-362)||(39698509-39698671)
chr5 (223-347)||(21522733-21522857)
chr5 (223-347)||(21533299-21533423)
chr5 (204-350)||(30183529-30183675)
chr5 (223-344)||(21542016-21542137)
chr5 (200-344)||(31084309-31084447)
chr5 (200-332)||(7677703-7677835)
chr5 (199-347)||(36642691-36642838)
chr5 (201-347)||(6401481-6401627)
chr5 (213-347)||(19579684-19579818)
chr5 (255-345)||(21351889-21351979)
chr5 (267-347)||(13287395-13287475)
chr5 (202-347)||(21190998-21191132)
chr5 (272-349)||(6247603-6247680)
chr5 (200-362)||(42893328-42893479)
chr5 (227-338)||(21814253-21814364)
chr5 (212-347)||(15382460-15382592)
chr5 (272-341)||(33178014-33178083)
chr5 (199-347)||(37328774-37328920)
chr5 (201-345)||(3966488-3966632)
chr5 (256-347)||(19552530-19552619)
chr5 (200-343)||(21576685-21576817)
chr5 (276-347)||(14674252-14674323)
chr5 (199-270)||(43564930-43565001)
chr5 (202-347)||(43001783-43001922)
chr5 (272-360)||(10298539-10298627)
chr5 (275-343)||(24906305-24906373)
chr5 (239-350)||(12641654-12641765)
chr5 (200-346)||(30098310-30098456)
chr5 (198-310)||(14873537-14873643)
chr5 (267-338)||(30135305-30135377)
chr5 (253-344)||(41995457-41995546)
chr5 (272-346)||(8420011-8420085)
chr5 (200-310)||(32766872-32766982)
chr5 (286-347)||(9449452-9449513)
chr5 (199-344)||(11685925-11686069)
chr5 (272-312)||(15884006-15884046)
chr5 (212-312)||(17088303-17088398)
chr5 (198-266)||(27932288-27932356)
chr5 (279-347)||(4105240-4105310)
chr5 (223-270)||(30502351-30502398)
chr5 (223-270)||(30542694-30542741)
chr5 (203-270)||(39268541-39268608)
chr5 (262-341)||(41633724-41633803)
chr5 (265-330)||(5894827-5894892)
chr5 (290-347)||(6770526-6770583)
chr5 (273-346)||(17177025-17177098)
chr5 (199-248)||(38464312-38464361)
chr5 (198-327)||(40131624-40131753)
chr5 (200-248)||(19820328-19820376)
chr5 (275-322)||(7218271-7218318)
chr5 (200-271)||(17123096-17123166)
chr5 (253-312)||(21319927-21319986)
chr5 (272-339)||(28588675-28588742)
chr5 (206-276)||(15588632-15588707)
chr5 (289-347)||(22013397-22013455)
chr5 (272-338)||(30099039-30099105)
chr5 (200-310)||(41091186-41091296)
chr5 (297-349)||(6072339-6072392)
chr5 (263-312)||(12199948-12199997)
chr5 (202-259)||(24238603-24238660)
chr5 (252-344)||(12264810-12264902)
chr5 (199-347)||(15410376-15410524)
chr5 (200-252)||(35017110-35017162)
chr5 (291-347)||(40000555-40000611)
[»] chr6 (77 HSPs)
chr6 (200-345)||(16766682-16766827)
chr6 (199-347)||(8365447-8365595)
chr6 (200-345)||(10770607-10770748)
chr6 (200-347)||(9107299-9107446)
chr6 (200-344)||(5970037-5970181)
chr6 (200-347)||(17435182-17435329)
chr6 (199-338)||(18367828-18367967)
chr6 (202-347)||(12696307-12696446)
chr6 (200-347)||(34595117-34595253)
chr6 (200-312)||(8713998-8714110)
chr6 (199-347)||(8776907-8777049)
chr6 (223-322)||(9522899-9522998)
chr6 (201-327)||(31384923-31385048)
chr6 (199-343)||(10339053-10339198)
chr6 (200-347)||(28152082-28152217)
chr6 (227-338)||(16488546-16488657)
chr6 (199-344)||(16833294-16833428)
chr6 (204-282)||(23130405-23130483)
chr6 (200-344)||(3209367-3209518)
chr6 (201-347)||(17841530-17841665)
chr6 (272-347)||(426515-426590)
chr6 (272-343)||(7801157-7801228)
chr6 (199-344)||(17327589-17327728)
chr6 (200-310)||(25038000-25038110)
chr6 (272-341)||(7977831-7977900)
chr6 (223-343)||(17302543-17302664)
chr6 (272-340)||(853860-853928)
chr6 (267-347)||(7930288-7930368)
chr6 (199-270)||(28715344-28715415)
chr6 (277-343)||(1681745-1681811)
chr6 (200-270)||(7378028-7378098)
chr6 (200-270)||(24645530-24645600)
chr6 (213-343)||(26562676-26562806)
chr6 (200-309)||(7248379-7248488)
chr6 (272-345)||(7938101-7938174)
chr6 (199-308)||(10294129-10294238)
chr6 (272-344)||(5626697-5626769)
chr6 (213-347)||(3398602-3398729)
chr6 (272-347)||(15489733-15489808)
chr6 (276-343)||(31959146-31959213)
chr6 (272-322)||(403865-403915)
chr6 (272-362)||(7265594-7265684)
chr6 (267-345)||(19044449-19044527)
chr6 (202-347)||(5000557-5000702)
chr6 (199-270)||(4877992-4878062)
chr6 (203-250)||(9025448-9025495)
chr6 (200-342)||(32313392-32313535)
chr6 (200-282)||(32839571-32839654)
chr6 (203-270)||(32978842-32978909)
chr6 (200-347)||(34073278-34073423)
chr6 (289-347)||(9658862-9658920)
chr6 (267-309)||(9911524-9911566)
chr6 (271-362)||(27904036-27904129)
chr6 (201-249)||(6665282-6665331)
chr6 (272-345)||(6898282-6898355)
chr6 (278-347)||(17341671-17341740)
chr6 (272-363)||(32978900-32978986)
chr6 (267-347)||(9027161-9027241)
chr6 (200-339)||(9629374-9629513)
chr6 (272-347)||(23771562-23771636)
chr6 (295-342)||(24115871-24115918)
chr6 (203-276)||(8389411-8389484)
chr6 (244-310)||(9195727-9195793)
chr6 (224-270)||(9658928-9658974)
chr6 (255-345)||(21395292-21395381)
chr6 (201-255)||(31959214-31959268)
chr6 (277-334)||(1191706-1191763)
chr6 (272-317)||(1700365-1700410)
chr6 (272-345)||(5732511-5732584)
chr6 (272-341)||(19040341-19040410)
chr6 (202-243)||(26178620-26178661)
chr6 (255-343)||(34290063-34290149)
chr6 (272-339)||(4877933-4878001)
chr6 (272-312)||(7027260-7027300)
chr6 (272-312)||(26402681-26402721)
chr6 (272-312)||(31429004-31429044)
chr6 (200-264)||(33818023-33818087)
[»] scaffold0003 (2 HSPs)
scaffold0003 (200-347)||(241577-241724)
scaffold0003 (199-250)||(236913-236964)
[»] chr3 (84 HSPs)
chr3 (199-344)||(41961578-41961723)
chr3 (199-338)||(14209105-14209244)
chr3 (200-365)||(27505211-27505370)
chr3 (202-343)||(4987222-4987363)
chr3 (201-347)||(14216875-14217021)
chr3 (201-347)||(14223004-14223150)
chr3 (199-347)||(28812499-28812646)
chr3 (200-344)||(34185052-34185196)
chr3 (223-347)||(15796246-15796370)
chr3 (224-347)||(14832082-14832205)
chr3 (201-344)||(15999951-16000089)
chr3 (200-347)||(55401058-55401194)
chr3 (199-322)||(49651715-49651837)
chr3 (204-344)||(14829676-14829816)
chr3 (199-333)||(55212960-55213093)
chr3 (200-344)||(20503451-20503584)
chr3 (202-347)||(28917984-28918120)
chr3 (223-346)||(2620007-2620128)
chr3 (200-362)||(18426917-18427068)
chr3 (250-338)||(34910309-34910397)
chr3 (272-343)||(10954939-10955010)
chr3 (243-347)||(750590-750695)
chr3 (200-345)||(17005548-17005693)
chr3 (200-339)||(8039764-8039903)
chr3 (272-347)||(8587022-8587097)
chr3 (200-343)||(9800027-9800170)
chr3 (272-347)||(10335287-10335362)
chr3 (271-345)||(10268486-10268560)
chr3 (200-322)||(16789020-16789141)
chr3 (265-362)||(25948881-25948978)
chr3 (272-344)||(21479104-21479176)
chr3 (274-341)||(26508099-26508166)
chr3 (202-345)||(29508429-29508567)
chr3 (199-270)||(40993274-40993345)
chr3 (200-270)||(11252025-11252095)
chr3 (272-345)||(25775493-25775567)
chr3 (232-344)||(25064895-25065005)
chr3 (267-344)||(39756222-39756299)
chr3 (205-265)||(16192667-16192727)
chr3 (255-322)||(1509547-1509614)
chr3 (272-347)||(26492206-26492281)
chr3 (272-322)||(51206354-51206404)
chr3 (198-266)||(7171554-7171622)
chr3 (202-282)||(13806284-13806363)
chr3 (272-347)||(8383240-8383315)
chr3 (289-360)||(29112298-29112369)
chr3 (200-250)||(11610578-11610628)
chr3 (267-344)||(14747547-14747625)
chr3 (277-347)||(24205047-24205117)
chr3 (266-347)||(3164020-3164101)
chr3 (254-347)||(4990950-4991043)
chr3 (200-276)||(14223788-14223864)
chr3 (295-344)||(40052318-40052367)
chr3 (272-344)||(3610619-3610691)
chr3 (272-312)||(8593155-8593195)
chr3 (289-345)||(14979166-14979222)
chr3 (250-310)||(16192729-16192789)
chr3 (275-343)||(21256990-21257058)
chr3 (264-344)||(22774063-22774143)
chr3 (201-245)||(25211604-25211648)
chr3 (232-344)||(26290357-26290469)
chr3 (272-344)||(35222924-35222996)
chr3 (277-345)||(35994744-35994811)
chr3 (199-251)||(40052380-40052432)
chr3 (272-347)||(10318036-10318110)
chr3 (278-341)||(11610510-11610573)
chr3 (200-243)||(12083959-12084002)
chr3 (232-271)||(14338455-14338494)
chr3 (291-362)||(23870579-23870650)
chr3 (272-322)||(7928458-7928508)
chr3 (224-310)||(11665964-11666050)
chr3 (200-254)||(17276792-17276846)
chr3 (200-277)||(21211335-21211413)
chr3 (289-347)||(21720747-21720805)
chr3 (200-270)||(35222987-35223057)
chr3 (272-322)||(38731226-38731276)
chr3 (200-253)||(27277780-27277832)
chr3 (198-255)||(27903702-27903759)
chr3 (201-249)||(1389908-1389956)
chr3 (272-312)||(3865692-3865732)
chr3 (277-361)||(5339077-5339161)
chr3 (223-259)||(10955012-10955048)
chr3 (272-344)||(25093488-25093560)
chr3 (272-344)||(33359747-33359819)
[»] chr4 (85 HSPs)
chr4 (199-338)||(24613629-24613768)
chr4 (199-344)||(19482654-19482799)
chr4 (199-364)||(22234818-22234984)
chr4 (201-310)||(30982808-30982917)
chr4 (219-345)||(27706125-27706251)
chr4 (200-347)||(23292926-23293062)
chr4 (202-312)||(19312353-19312463)
chr4 (201-344)||(3947702-3947839)
chr4 (200-347)||(5414101-5414248)
chr4 (200-311)||(47264005-47264116)
chr4 (250-360)||(4383338-4383447)
chr4 (200-346)||(36635308-36635449)
chr4 (200-347)||(24343490-24343632)
chr4 (279-349)||(11651142-11651212)
chr4 (202-322)||(28000672-28000794)
chr4 (200-347)||(35157925-35158061)
chr4 (200-312)||(715545-715648)
chr4 (200-312)||(752871-752974)
chr4 (272-344)||(21945489-21945561)
chr4 (139-199)||(27442661-27442721)
chr4 (272-347)||(30298929-30299005)
chr4 (272-347)||(30327797-30327873)
chr4 (237-344)||(40481623-40481723)
chr4 (201-344)||(847937-848080)
chr4 (200-271)||(8423658-8423729)
chr4 (272-347)||(12797339-12797413)
chr4 (272-339)||(12895275-12895342)
chr4 (203-340)||(28084511-28084640)
chr4 (200-270)||(34306744-34306814)
chr4 (227-364)||(37496665-37496807)
chr4 (272-349)||(16303267-16303344)
chr4 (201-265)||(14465006-14465070)
chr4 (272-346)||(49431009-49431084)
chr4 (272-335)||(54580024-54580087)
chr4 (273-347)||(6485613-6485687)
chr4 (267-344)||(12708132-12708210)
chr4 (265-347)||(12895110-12895191)
chr4 (205-347)||(30838193-30838335)
chr4 (200-362)||(46083920-46084081)
chr4 (267-344)||(11596348-11596425)
chr4 (272-345)||(16073380-16073452)
chr4 (273-322)||(29205452-29205501)
chr4 (200-347)||(7012049-7012197)
chr4 (199-259)||(35161096-35161156)
chr4 (272-312)||(42640547-42640587)
chr4 (232-347)||(903905-904020)
chr4 (200-344)||(15029751-15029890)
chr4 (200-271)||(21345473-21345544)
chr4 (274-344)||(24543967-24544038)
chr4 (200-270)||(2361915-2361985)
chr4 (199-249)||(18513174-18513224)
chr4 (272-322)||(28964249-28964299)
chr4 (272-350)||(34306805-34306882)
chr4 (248-322)||(51701266-51701340)
chr4 (199-248)||(11596296-11596345)
chr4 (200-312)||(11931298-11931410)
chr4 (236-343)||(20743242-20743350)
chr4 (254-347)||(40742574-40742667)
chr4 (198-250)||(944600-944652)
chr4 (272-344)||(2361976-2362048)
chr4 (202-270)||(4157198-4157266)
chr4 (202-270)||(4157485-4157553)
chr4 (200-280)||(15724483-15724563)
chr4 (199-270)||(53381529-53381601)
chr4 (201-248)||(5922532-5922579)
chr4 (272-311)||(6879466-6879505)
chr4 (200-259)||(18966569-18966628)
chr4 (200-259)||(29205528-29205587)
chr4 (200-247)||(37203324-37203371)
chr4 (272-347)||(40179637-40179712)
chr4 (205-251)||(3712458-3712504)
chr4 (200-282)||(5225542-5225624)
chr4 (199-257)||(7214465-7214523)
chr4 (200-266)||(16886660-16886726)
chr4 (272-338)||(38847013-38847079)
chr4 (266-331)||(5775353-5775418)
chr4 (199-248)||(16184902-16184951)
chr4 (204-249)||(34594208-34594253)
chr4 (213-310)||(38148667-38148764)
chr4 (266-344)||(50280867-50280947)
chr4 (219-270)||(10133757-10133809)
chr4 (295-347)||(20521873-20521925)
chr4 (286-322)||(30522930-30522966)
chr4 (275-343)||(31800482-31800550)
chr4 (201-249)||(40965341-40965389)
[»] chr2 (77 HSPs)
chr2 (200-345)||(11223793-11223937)
chr2 (200-344)||(26769497-26769641)
chr2 (199-346)||(37419727-37419874)
chr2 (200-347)||(34784911-34785058)
chr2 (200-347)||(30717459-30717606)
chr2 (202-347)||(15657847-15657992)
chr2 (200-347)||(30404790-30404926)
chr2 (200-363)||(27084229-27084388)
chr2 (200-302)||(35056896-35056998)
chr2 (202-344)||(36756275-36756417)
chr2 (201-349)||(27286222-27286370)
chr2 (272-347)||(18421946-18422021)
chr2 (200-345)||(18840953-18841087)
chr2 (272-347)||(15972856-15972931)
chr2 (200-354)||(12668352-12668506)
chr2 (272-345)||(20242728-20242801)
chr2 (202-347)||(2438661-2438793)
chr2 (272-347)||(19536398-19536474)
chr2 (205-347)||(23058389-23058519)
chr2 (272-347)||(37558960-37559035)
chr2 (200-343)||(21782744-21782890)
chr2 (200-344)||(38117099-38117232)
chr2 (253-322)||(4882678-4882747)
chr2 (242-347)||(34337152-34337252)
chr2 (227-344)||(36096331-36096448)
chr2 (201-310)||(44860340-44860449)
chr2 (275-347)||(6940238-6940310)
chr2 (200-347)||(41843424-41843565)
chr2 (272-347)||(20539675-20539750)
chr2 (265-347)||(24894372-24894454)
chr2 (200-302)||(24975255-24975356)
chr2 (200-310)||(32749754-32749864)
chr2 (212-347)||(14996171-14996300)
chr2 (200-341)||(18420363-18420504)
chr2 (278-347)||(21374706-21374775)
chr2 (272-344)||(21624252-21624325)
chr2 (212-309)||(28524447-28524544)
chr2 (266-339)||(33153415-33153488)
chr2 (272-344)||(20473308-20473380)
chr2 (196-344)||(28677895-28678037)
chr2 (199-347)||(30335400-30335536)
chr2 (277-347)||(12940941-12941011)
chr2 (200-249)||(12748737-12748786)
chr2 (201-270)||(28596518-28596587)
chr2 (199-270)||(37497169-37497241)
chr2 (272-331)||(974746-974805)
chr2 (283-349)||(29367381-29367448)
chr2 (289-347)||(16069272-16069330)
chr2 (200-270)||(24009344-24009414)
chr2 (205-270)||(12224272-12224337)
chr2 (200-261)||(15907851-15907912)
chr2 (138-199)||(39959414-39959475)
chr2 (200-265)||(42511322-42511387)
chr2 (272-312)||(5040752-5040792)
chr2 (202-270)||(19942314-19942382)
chr2 (271-347)||(21091706-21091782)
chr2 (200-310)||(18889519-18889630)
chr2 (289-368)||(24009259-24009337)
chr2 (247-310)||(24067273-24067336)
chr2 (272-343)||(38442295-38442365)
chr2 (272-330)||(18255981-18256039)
chr2 (289-351)||(19573958-19574019)
chr2 (289-347)||(21616745-21616803)
chr2 (200-310)||(22084756-22084871)
chr2 (200-309)||(29367283-29367382)
chr2 (200-254)||(37559042-37559096)
chr2 (237-322)||(4207865-4207949)
chr2 (274-347)||(23718009-23718082)
chr2 (274-347)||(24105681-24105754)
chr2 (278-347)||(39323247-39323316)
chr2 (199-259)||(15972933-15972993)
chr2 (272-361)||(20922929-20923016)
chr2 (200-256)||(31456560-31456616)
chr2 (254-317)||(36409612-36409673)
chr2 (239-319)||(38355855-38355935)
chr2 (272-308)||(44635520-44635556)
chr2 (200-244)||(44635568-44635612)
[»] scaffold0019 (1 HSPs)
scaffold0019 (199-344)||(71709-71856)
[»] scaffold0450 (1 HSPs)
scaffold0450 (200-358)||(8564-8722)
[»] scaffold0123 (1 HSPs)
scaffold0123 (200-310)||(44454-44564)
[»] scaffold0136 (1 HSPs)
scaffold0136 (199-344)||(3777-3922)
[»] scaffold0086 (1 HSPs)
scaffold0086 (200-312)||(2946-3058)
[»] scaffold0004 (3 HSPs)
scaffold0004 (201-362)||(92775-92940)
scaffold0004 (272-343)||(123612-123686)
scaffold0004 (272-317)||(83173-83218)
[»] scaffold0044 (1 HSPs)
scaffold0044 (207-310)||(53200-53303)
[»] scaffold0018 (2 HSPs)
scaffold0018 (266-347)||(178813-178895)
scaffold0018 (278-349)||(192256-192327)
[»] scaffold0306 (1 HSPs)
scaffold0306 (202-347)||(13383-13523)
[»] scaffold0171 (2 HSPs)
scaffold0171 (199-312)||(23529-23642)
scaffold0171 (265-344)||(23406-23485)
[»] scaffold0152 (1 HSPs)
scaffold0152 (202-347)||(21804-21944)
[»] scaffold0053 (1 HSPs)
scaffold0053 (200-347)||(8781-8917)
[»] scaffold0008 (1 HSPs)
scaffold0008 (202-347)||(263303-263448)
[»] scaffold0223 (1 HSPs)
scaffold0223 (263-347)||(20155-20239)
[»] scaffold0103 (1 HSPs)
scaffold0103 (243-347)||(51794-51890)
[»] scaffold0036 (1 HSPs)
scaffold0036 (202-343)||(9678-9819)
[»] scaffold0652 (1 HSPs)
scaffold0652 (201-347)||(403-538)
[»] scaffold0361 (1 HSPs)
scaffold0361 (200-361)||(14498-14646)
[»] scaffold0027 (1 HSPs)
scaffold0027 (272-347)||(46665-46740)
[»] scaffold0512 (1 HSPs)
scaffold0512 (200-270)||(4976-5046)
[»] scaffold0793 (1 HSPs)
scaffold0793 (200-312)||(4821-4924)
[»] scaffold0623 (1 HSPs)
scaffold0623 (201-345)||(5926-6070)
[»] scaffold0246 (1 HSPs)
scaffold0246 (237-344)||(19562-19662)
[»] scaffold0011 (1 HSPs)
scaffold0011 (272-346)||(17750-17824)
[»] scaffold0655 (2 HSPs)
scaffold0655 (138-199)||(4205-4266)
scaffold0655 (139-199)||(6261-6321)
[»] scaffold0021 (1 HSPs)
scaffold0021 (274-347)||(130465-130538)
[»] scaffold0083 (2 HSPs)
scaffold0083 (272-347)||(45531-45607)
scaffold0083 (223-259)||(45493-45529)
[»] scaffold0050 (1 HSPs)
scaffold0050 (223-270)||(70327-70374)
[»] scaffold0007 (1 HSPs)
scaffold0007 (202-347)||(225199-225344)
[»] scaffold0057 (1 HSPs)
scaffold0057 (199-337)||(24018-24156)
[»] scaffold0122 (2 HSPs)
scaffold0122 (201-345)||(8651-8795)
scaffold0122 (272-338)||(8002-8067)
[»] scaffold0039 (1 HSPs)
scaffold0039 (223-343)||(84925-85045)
[»] scaffold0025 (1 HSPs)
scaffold0025 (272-312)||(23788-23828)
[»] scaffold0722 (1 HSPs)
scaffold0722 (272-350)||(7033-7111)
[»] scaffold0154 (1 HSPs)
scaffold0154 (194-287)||(13456-13549)
[»] scaffold0227 (1 HSPs)
scaffold0227 (279-362)||(7319-7403)
[»] scaffold0380 (1 HSPs)
scaffold0380 (199-258)||(8662-8721)
[»] scaffold0066 (1 HSPs)
scaffold0066 (283-338)||(33375-33430)
[»] scaffold1528 (1 HSPs)
scaffold1528 (262-340)||(1025-1103)
[»] scaffold0475 (1 HSPs)
scaffold0475 (196-270)||(3357-3431)
[»] scaffold0168 (2 HSPs)
scaffold0168 (254-347)||(21026-21119)
scaffold0168 (199-235)||(21372-21408)
[»] scaffold0116 (1 HSPs)
scaffold0116 (272-345)||(9883-9956)


Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 113)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 397
Target Start/End: Complemental strand, 1815558 - 1815190
Alignment:
Q  18 tatggaattggagggaatgaggttaatggataagcactcttggataaatgcagaccttaatgtagaggagagtccactacttgcttcatgaatcatcatc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1815558 tatggaattggagggaatgaggttaatggataagcactcttggatcaatgcagaccttaatgtagaggagagtccactacttgcttcatgaatcatcatc 1815459  T
Q  118 tagcatttatgaacttggtgatgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatcctatgaagcacagacact 217  Q
    ||||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||    
T  1815458 tagcatttatgaatttggtgatgatagaaaagaatatttgtcgaaattagttataatgattttcctgcaattatgttgtatcctatgaatcacggtcact 1815359  T
Q  218 tctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaat 317  Q
     |||||||||||| ||||||||||||||||| ||||||||||            |||||||||||||||| |||||||||||||||||||||||||||||    
T  1815358 cctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtc-----------ggacaccgacacttgtaattacactgaattatgtgattttttaaaat 1815270  T
Q  318 aattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggttgtatcataattagatagttgacctacacgtgt 397  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  1815269 aattatttgtgtcggcgtgtcagtgtccgtatccgtgcttcataggttgtatcatgattagatagttgacctacatgtgt 1815190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 481 - 672
Target Start/End: Original strand, 1816189 - 1816380
Alignment:
Q  481 accacattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggctttcgtctattgttttggactttttgatggcaacaa 580  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  1816189 accacattcctgtgatttatttgagagacaacatccacctcgttaatgaattgttcaatttggctttcgtctattgttttggactttttgatagccacaa 1816288  T
Q  581 ttctcttatcatcaagttcccctttgaaaactgtaccaaaacctcctctacctatgattaagctctcatcaaagttgttagtagctttcctt 672  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1816289 ttctattatcatcaagttcccctttgaaaactgtaccaaaacctcctctacctatgattaagctctcatcaaagttgttagtagctttcctt 1816380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 481 - 672
Target Start/End: Complemental strand, 1856855 - 1856664
Alignment:
Q  481 accacattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggctttcgtctattgttttggactttttgatggcaacaa 580  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  1856855 accacatttctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggcttttgtctattgttttagactttttgatagcaacaa 1856756  T
Q  581 ttctcttatcatcaagttcccctttgaaaactgtaccaaaacctcctctacctatgattaagctctcatcaaagttgttagtagctttcctt 672  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||    
T  1856755 ttctattatcatcaagttcccctttgtaaactgtaccaaaacctcctttacctatgattaagctctcatcaaatttgttagtggctttcctt 1856664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 47989627 - 47989484
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| ||||||| |||| |||| |||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 47989528  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||    
T  47989527 tatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtc 47989484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 192 - 369
Target Start/End: Original strand, 32461385 - 32461561
Alignment:
Q  192 gttgtatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagtta 291  Q
    ||||||| ||||||||||| |||||||||  |||||||| |||||| ||||| ||||||||||||||| ||||||||||  ||||| ||||||||| |||    
T  32461385 gttgtatgctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgaca-cacaccaacacttgtaatta 32461483  T
Q  292 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggttgtat 369  Q
    || | |||||||||||||||| |||| |||| ||||| |||||||||| |||| ||||  ||||||| ||||||||||    
T  32461484 cattaaattatgtgattttttcaaattattagttgtgccggcgtgtcactgtctgtatccgtgcttcctaggttgtat 32461561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 198 - 344
Target Start/End: Complemental strand, 6427596 - 6427447
Alignment:
Q  198 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactga 297  Q
    ||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||| ||| || ||| ||||| |||||||||||||||| |||    
T  6427596 tcctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattga 6427497  T
Q  298 attatgtgatt---ttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||   |||| |||| |||| |||||||||| ||||||||||    
T  6427496 attatgtgatttttttttcaaattattagttgtgtcggcatgtcagtgtc 6427447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 199 - 338
Target Start/End: Complemental strand, 9828175 - 9828036
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||| |||||| | |||||||||||||||||||||||||||||||||| |||| ||||||||||| |  | ||||||||||    
T  9828175 cctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaa 9828076  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    |||||||||||| | |||| |||| | |||||||||||||    
T  9828075 ttatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 18556385 - 18556532
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||||||| |||||||| |||||| |||||||| |||||||| ||||||||||| || |||||| | ||||||| ||||| | |||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaat 18556484  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||| |||| |||| ||||  |||||||||||||||||||||||    
T  18556485 tatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgt 18556532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 202 - 347
Target Start/End: Original strand, 1486646 - 1486785
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||      |||||| ||||||||||||| || |||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttataattacactgaatta 1486739  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||| |||| ||||  |||||| |||||||||| |||||    
T  1486740 tgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgt 1486785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 199 - 347
Target Start/End: Complemental strand, 40917880 - 40917734
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||| | ||| |||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||| ||||||| ||||||| ||    
T  40917880 cctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaa 40917781  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |  ||||||||||| |||| ||||  ||||||||||||||||| |||||    
T  40917780 t--tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgt 40917734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 1843475 - 1843595
Alignment:
Q  18 tatggaattggagggaatgaggttaatggataagcactcttggataaatgcagaccttaatgtagaggagagtccactacttgcttcatgaatcatcatc 117  Q
    |||||||||||||||||||||||||||| |||||||||||||||| || |  |||   |||||||||||||||    |||||||||||||||||||||||    
T  1843475 tatggaattggagggaatgaggttaatgaataagcactcttggatcaaagatgactcaaatgtagaggagagt-aggtacttgcttcatgaatcatcatc 1843573  T
Q  118 tagcatttatgaacttggtgat 139  Q
    |||||||||||||| |||||||    
T  1843574 tagcatttatgaacctggtgat 1843595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 1857486 - 1857606
Alignment:
Q  18 tatggaattggagggaatgaggttaatggataagcactcttggataaatgcagaccttaatgtagaggagagtccactacttgcttcatgaatcatcatc 117  Q
    |||||||||||||||||||||||||||| |||||||||||||||| || |  |||   |||||||||||||||    |||||||||||||||||||||||    
T  1857486 tatggaattggagggaatgaggttaatgaataagcactcttggatcaaagatgactcaaatgtagaggagagt-aggtacttgcttcatgaatcatcatc 1857584  T
Q  118 tagcatttatgaacttggtgat 139  Q
    |||||||||||||| |||||||    
T  1857585 tagcatttatgaacctggtgat 1857606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 1869084 - 1869204
Alignment:
Q  18 tatggaattggagggaatgaggttaatggataagcactcttggataaatgcagaccttaatgtagaggagagtccactacttgcttcatgaatcatcatc 117  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||  |||   ||||||||||||||| |  | |||||||||||||||||||||    
T  1869084 tatggaattggagggaatgaggttaatgaataagcactcttggatcaatgatgactcaaatgtagaggagagt-cggttcttgcttcatgaatcatcatc 1869182  T
Q  118 tagcatttatgaacttggtgat 139  Q
    |||| ||||||||| |||||||    
T  1869183 tagcttttatgaacctggtgat 1869204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 31694638 - 31694751
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| |||||||||||| ||| ||||||||| | | |||| ||||| |||||||||| |||||||||||||||| ||| ||||||    
T  31694638 cctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 31694737  T
Q  299 ttatgtgatttttt 312  Q
    ||||||||||||||    
T  31694738 ttatgtgatttttt 31694751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 223 - 347
Target Start/End: Original strand, 6612123 - 6612247
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||| ||||| |||||||||||| | ||||||| |||| ||||| |||||||||||||||| |||||||||||||||| ||||||| |||| ||||    
T  6612123 gattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T
Q  323 tttgtgtcggcgtgtcagtgtccgt 347  Q
      ||| ||||||||||| |||||||    
T  6612223 actgtatcggcgtgtcattgtccgt 6612247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 641
Target Start/End: Complemental strand, 1868447 - 1868290
Alignment:
Q  484 acattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggctttcgtctattgttttggactttttgatggcaacaattc 583  Q
    |||||||| |||||||||||||||| |||| ||||||||||||||||||| || |||||||||   |||||| |||| || |||||||| ||||| ||||    
T  1868447 acattcctatgatttatttgagagagaacaaccacctcattaatgaattgatcgatttggcttctatctattatttttgattttttgatagcaacgattc 1868348  T
Q  584 tcttatcatcaagttcccctttgaaaactgtaccaaaacctcctctacctatgattaa 641  Q
    | |||||||| ||    ||||||||||| ||||||||||| ||| | || ||||||||    
T  1868347 ttttatcatctagaagtcctttgaaaacggtaccaaaaccacctttgccaatgattaa 1868290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 5944413 - 5944267
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||  ||||| ||| |||||||| | ||||||||||||||| |||| ||||| | || ||||| ||||||||||||| || |||||||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaat 5944314  T
Q  300 tatgtgatt--ttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||  |||| |||| ||||  |||| |||||||||||||||    
T  5944313 tatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtc 5944267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 202 - 322
Target Start/End: Complemental strand, 17778670 - 17778557
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    |||||||||  ||||||||| |||||||||||||||||||||||||||||||||     |||||||||| |||||||||||||||| ||||||||   ||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg----cgacaccgacacgacaccgacacttgtaattacactg---ta 17778578  T
Q  302 tgtgattttttaaaataatta 322  Q
    ||||||||||| |||| ||||    
T  17778577 tgtgattttttcaaattatta 17778557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 28273065 - 28273162
Alignment:
Q  248 acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    |||||||||||| |||| ||| | |||||||||||||||| |||||||||||||| ||||||||| |||| |||| ||||||| || |||||||||||    
T  28273065 acgtgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtcc 28273162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 37598951 - 37598816
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||| |||||||| ||||||  |||||||||||||||||||| ||||||||||           ||| || ||||||||||    
T  37598951 cctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgaca-----------cttataattacactgaa 37598863  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 346  Q
    || ||||||||||| |||| |||| |||||||||||||||||||||||    
T  37598862 tt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 22881617 - 22881689
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||    
T  22881617 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 267 - 362
Target Start/End: Original strand, 1704988 - 1705083
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 362  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| |||| ||||  |||||||| ||||| ||||||||||  |||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgtatccgtgcttcatag 1705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 267 - 344
Target Start/End: Original strand, 24577182 - 24577259
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||| ||||||| |||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 201 - 332
Target Start/End: Original strand, 40258874 - 40258994
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||  |||||| ||| |||||||| ||||| ||||||||||| ||||||||||||||           ||||||||||||| ||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgac-----------accgacacttgtaattacactgaatt 40258962  T
Q  301 atgtgattttttaaaataattatttgtgtcgg 332  Q
    |||||||||||| |||| |||| |||||||||    
T  40258963 atgtgattttttcaaattattaattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 46348323 - 46348459
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||  ||| ||| |||| |||| ||||||||||||||||||||||| ||||           |||||||||||| ||||||| |||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgaca-----------ccgacacttgtaattacactaaat 46348411  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||| ||||||||| |||| ||||  |||||||||||||||||||||||    
T  46348412 tatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 46348459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 19326856 - 19326916
Alignment:
Q  139 tgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 199  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  19326856 tgatagaatagaatattagtcataattagttataattattttcctgtaattatgttgtatc 19326916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 199 - 339
Target Start/End: Complemental strand, 25934747 - 25934607
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||  ||| |||| | |||| ||||| ||||||||||||||| |||||||||| || |||||||| | || |||||||| |    
T  25934747 cctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgta 25934648  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtca 339  Q
    || ||||||||| || || | |||  |||||||||||||||    
T  25934647 ttttgtgattttctagaaaatttagctgtgtcggcgtgtca 25934607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 232 - 347
Target Start/End: Original strand, 6414963 - 6415077
Alignment:
Q  232 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 331  Q
    |||| ||||||| ||||||||||||||| |||| ||| ||||||||||||| | || ||| |||| ||||||||||||| | |||||||||    |||||    
T  6414963 tgtcgcggtgtcagacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcg 6415061  T
Q  332 gcgtgtcagtgtccgt 347  Q
    ||||||||||||||||    
T  6415062 gcgtgtcagtgtccgt 6415077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 232 - 343
Target Start/End: Original strand, 27471527 - 27471638
Alignment:
Q  232 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 331  Q
    ||||||||||||||||||||||||| ||  ||||||| |||||||| |||| |||| ||||||||||||||||| |||| | |||| ||||   || |||    
T  27471527 tgtcccggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcg 27471626  T
Q  332 gcgtgtcagtgt 343  Q
    | ||||||||||    
T  27471627 gtgtgtcagtgt 27471638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 42359450 - 42359525
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||| ||||  |||||| ||||||||||||||||    
T  42359450 gacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgt 42359525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 266 - 340
Target Start/End: Complemental strand, 113363 - 113289
Alignment:
Q  266 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag 340  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 644
Target Start/End: Original strand, 9218929 - 9219086
Alignment:
Q  487 ttcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggctttcgtctattgttttggactttttgatggcaacaattctct 586  Q
    ||||| ||||||||||| || | |||| | ||||||||||||||||| || || ||  || |||||||| |||||||||||||||  || |||||| | |    
T  9218929 ttcctatgatttatttgggacagaacaactacctcattaatgaattgctcgatctgatttgcgtctattattttggactttttgacagcgacaattttgt 9219028  T
Q  587 tatcat-caagttcccctttgaaaactgtaccaaaacctcctctacctatgattaagct 644  Q
    ||||   |||  | || |||||||||||||||||||||||||||||| |||||||||||    
T  9219029 tatcgggcaaaattcc-tttgaaaactgtaccaaaacctcctctaccgatgattaagct 9219086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 232 - 310
Target Start/End: Original strand, 9629861 - 9629939
Alignment:
Q  232 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 310  Q
    ||||||||||||||||| |||||||||| |||| ||||| ||||||||||||| || | |||||||||||| |||||||    
T  9629861 tgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgatttt 9629939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 22515827 - 22515963
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| |||| |||||||||| | |||||||||| ||||           |||||||||||| ||||||| |||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgaca-----------ccgacacttgtaattacactaaat 22515915  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| |||| ||||  |||||| ||||||| ||||||||    
T  22515916 tatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgt 22515963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 200 - 335
Target Start/End: Complemental strand, 25362012 - 25361881
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| ||||||  || |||||||  ||| |||||||||||||  ||||||||| |||||||||| ||||| ||||| | || |||||||||||    
T  25362012 ctatgaagcacggacactcttcggattagg--tgttccggtgtcggaca--tgtcgtgtccgacaccgacacgacactgacacatataattacactgaat 25361917  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgt 335  Q
    ||||||||||| | |||| || | | ||||||||||    
T  25361916 tatgtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 484 - 644
Target Start/End: Original strand, 9200410 - 9200570
Alignment:
Q  484 acattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggctttcgtctattgttttggactttttgatggcaacaattc 583  Q
    |||||||| ||||||||||| |  | |||| | ||||||||||||||||| ||||||||  || |||| ||| ||||||| ||||| |  || ||||||     
T  9200410 acattcctatgatttatttgggtcagaacaactacctcattaatgaattgctcaatttgatttgcgtcaattattttggatttttttacagcgacaattt 9200509  T
Q  584 tcttatcatcaagttcccctttgaaaactgtaccaaaacctcctctacctatgattaagct 644  Q
    | ||||||   |   | |||||| ||||||||||||||||||||||||| |||||||||||    
T  9200510 tgttatcaggtaaaactcctttgtaaactgtaccaaaacctcctctaccgatgattaagct 9200570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 201 - 349
Target Start/End: Complemental strand, 21032335 - 21032188
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    ||||||||||||||||| ||  |||||||| | || || |||||||||| ||||||||| |||||| ||| |||||||||| ||||| ||| | | ||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacacgacaccgacatttgtaattatatttaatt 21032236  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    | || |||||||  ||| ||||  |||||| | ||||||||||||||||    
T  21032235 aagtaatttttt-taattattaactgtgtcagtgtgtcagtgtccgtat 21032188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 655
Target Start/End: Complemental strand, 1842838 - 1842667
Alignment:
Q  484 acattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggctttcgtctattgttttggactttttgatggcaacaattc 583  Q
    |||||||| |||||||||||||||| || |   ||||||||||||||||| |  |||||||||   |||||| |||| || |||||||| ||||| ||||    
T  1842838 acattcctatgatttatttgagagagaataattacctcattaatgaattgattgatttggcttctatctattatttttgattttttgatagcaacgattc 1842739  T
Q  584 tcttatcatcaagttcccctttgaaaactgtaccaaaacctcctctacctatgattaagctctcatcaaagt 655  Q
    | |||||||| ||    |||||| |||| ||||||||||| ||| | || ||||||||  |||| |||||||    
T  1842738 ttttatcatctagaaatcctttgtaaacagtaccaaaaccacctttgccaatgattaaattctcgtcaaagt 1842667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 13997940 - 13997869
Alignment:
Q  273 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||| | || |||||||||||||||||||||||| |||||||||   |||||||||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 18337448 - 18337342
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| ||| ||||||||||| ||||||||||||||| |||||            |||||||||||||||| |||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtc-----------cgacaccgacacttgtaattacactgaat 18337360  T
Q  300 tatgtgattttttaaaat 317  Q
    ||||||||||||| ||||    
T  18337359 tatgtgattttttcaaat 18337342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 272 - 362
Target Start/End: Original strand, 31672896 - 31672987
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt-ccgtatttgtgcttcatag 362  Q
    |||||||| ||||||| ||||||||||||| |||||||||| |||| ||||  |||||||| |||||||||| ||||||  |||||||||||    
T  31672896 gacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcccgtatccgtgcttcatag 31672987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 38078662 - 38078733
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    |||||||||||||||| ||||| |||||||||||||||||| |||| ||||  ||||||| |||||||||||    
T  38078662 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt 38078733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 5898205 - 5898275
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgac 269  Q
    ||||| |||||| |||||| ||| |||||| | ||||||||||| ||||||||||||||||||||||||||    
T  5898205 cctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgac 5898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 9103697 - 9103624
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 346  Q
    |||||||||||||||| ||| ||| |||||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  9103697 gacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccg 9103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 5376483 - 5376576
Alignment:
Q  254 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||| |||| ||||| ||||||||||||| || |||||||||||||||| ||||| | |||| ||||   |||||||||||| |||||||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgt 5376576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 44482310 - 44482250
Alignment:
Q  250 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 310  Q
    |||||||||| |||||||||| ||||||||||| | || ||||||||||||||||||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgatttt 44482250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 339
Target Start/End: Original strand, 19058857 - 19058924
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 339  Q
    |||||||||||||||| |||||||||||||||| || |||| |||| ||||  |||||||||||||||    
T  19058857 gacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtca 19058924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 30173732 - 30173803
Alignment:
Q  241 gtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||| |||||||||| || || |||| |||||||||||||||| ||||||||| |||||| |||||||    
T  30173732 gtcggacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgtaatttttt 30173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 48450592 - 48450663
Alignment:
Q  276 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||| ||||||| |||||||| ||||||| |||| ||||  ||||| |||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgt 48450663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 398783 - 398841
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||||||||||| |||| ||||   ||||||||||||||||||||||    
T  398783 ttacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgt 398841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 432 - 486
Target Start/End: Complemental strand, 1815174 - 1815120
Alignment:
Q  432 aaaccctcacccacatatagctgccgccacgcccctcccttgcactgccaccaca 486  Q
    ||||||||||||||||||||| |||||||| |||||||||||| | |||||||||    
T  1815174 aaaccctcacccacatatagcagccgccacacccctcccttgcgccgccaccaca 1815120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 2896060 - 2896197
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||| ||  |||||||||  |||||||  ||||||||| |||||||| |||||||||||||||||||||            | ||| |||||||||    
T  2896060 cctatgaaacatggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacat-----------atatagctacactgaa 2896148  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||| | |||| ||||   ||||||||||||||||||||||    
T  2896149 ttatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 2896197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 18190048 - 18190118
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||| || ||||| ||| |||||||  |||||||||||||||||||||| |||||||||| |||||    
T  18190048 ctatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgaca 18190118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 34371799 - 34371733
Alignment:
Q  244 ggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 310  Q
    ||||||||||||| || |||||| ||| ||||||||||| | || ||||||||||||||||||||||    
T  34371799 ggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgatttt 34371733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 6332794 - 6332689
Alignment:
Q  206 agcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtg 305  Q
    ||||||||||||  || ||| |||||||||| |||||  |||| || |||  |  |||||| ||| |||||||| ||||||| |||||||||||||||||    
T  6332794 agcacagacactcatcggatcaggcatgtcctggtgttagacatgtatcgcattcgacaccaacacgacaccgatacttgtaattacactgaattatgtg 6332695  T
Q  306 attttt 311  Q
    ||||||    
T  6332694 attttt 6332689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 601 - 650
Target Start/End: Original strand, 9162134 - 9162183
Alignment:
Q  601 cctttgaaaactgtaccaaaacctcctctacctatgattaagctctcatc 650  Q
    ||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  9162134 cctttgaaaactgtaccaaaacctcctctgccgatgattaagctatcatc 9162183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 10572572 - 10572661
Alignment:
Q  254 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    |||| |||||||| |||  |||||||||| | || |||||| ||||||||||||||| | |||| |||| | ||||||||||||||||||    
T  10572572 cgtgcctgacaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 17408821 - 17408740
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgaca 281  Q
    ||||||||||||||||||  ||||||||||  | ||  ||||||||||||||||||||||||| ||| |||  |||||||||    
T  17408821 ctatgaagcacagacactcttcagattaggtgtatcttggtgtcggacacgtgtcgtgtctgataccaacacaacaccgaca 17408740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 48040465 - 48040538
Alignment:
Q  275 accgacacttgtagttacactgaattatgtgat-tttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| ||||||| || |||||||  ||||| |||| ||||| |||||||||||||||||||||||    
T  48040465 accgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtgtcagtgtccgt 48040538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 644
Target Start/End: Complemental strand, 9118435 - 9118275
Alignment:
Q  484 acattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggctttcgtctattgttttggactttttgatggcaacaattc 583  Q
    |||||||| ||||||||||| || | || | | ||||||||||||||||| || |||||  || |||||||| || ||||||||||||  || || ||||    
T  9118435 acattcctatgatttatttgggacagaataactacctcattaatgaattgctcgatttgatttgcgtctattattctggactttttgacagccacgattc 9118336  T
Q  584 tcttatcatcaagttcccctttgaaaactgtaccaaaacctcctctacctatgattaagct 644  Q
    | |||||    |   | |||||||||| |||||| ||||||||||| || |||||||||||    
T  9118335 tgttatcgggtaaaactcctttgaaaattgtaccgaaacctcctcttccaatgattaagct 9118275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 358
Target Start/End: Complemental strand, 12612073 - 12611935
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    ||||| |||||| ||||| ||||||||| ||||||||| ||||| ||| || || ||||| | |  ||||||| |||||||||||||||| |||| | ||    
T  12612073 gattaagcatgttccggtatcggacacgcgtcgtgtctaacaccaacacgatactgacacatatgattacactcaattatgtgattttttcaaattacta 12611974  T
Q  323 tttgtgt---cggcgtgtcagtgtccgtatttgtgcttc 358  Q
       ||||   ||||||||||||||| ||||| |||||||    
T  12611973 acagtgtcagcggcgtgtcagtgtctgtattcgtgcttc 12611935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 29163323 - 29163391
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||  ||||||||| |||||| | |||||||||||| | ||||||||||||| ||||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgaca 29163391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 36878519 - 36878447
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||| | || |||||||||||||||||||||| | |||| ||||   |||||||||||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 51410083 - 51410043
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  51410083 gacaccgacacttgtaattacactgaattatgtgatttttt 51410043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 52284794 - 52284731
Alignment:
Q  238 ggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 302  Q
    ||||||||||| ||||||||||||||||||| ||  |||||||||||||| ||| ||||||||||    
T  52284794 ggtgtcggacatgtgtcgtgtctgacaccgatat-tcaccgacacttgtaattatactgaattat 52284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 200 - 311
Target Start/End: Original strand, 15449170 - 15449272
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||          |||||| |||||||| | ||||| |||||||||| ||||||| |||    
T  15449170 ctatgaagcacagacactccttggattaggcatgtctcggtgtca---------cgtgtccgacaccgatacgacacagacacttgtaattacactaaat 15449260  T
Q  300 tatgtgattttt 311  Q
    ||||||||||||    
T  15449261 tatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 16164243 - 16164366
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||| |||| |||||  || |||||||| ||||| |||||||||||||||| | |||  ||||| ||| ||||  ||||| | || ||||| | ||    
T  16164243 cctatgaaacacatacactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaa 16164342  T
Q  299 ttatgtgattttttaaaataatta 322  Q
    |||||||||||||| |||| ||||    
T  16164343 ttatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 292 - 347
Target Start/End: Complemental strand, 16812581 - 16812526
Alignment:
Q  292 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||||||||| | |||| |||||| ||||||| ||||||||||||||    
T  16812581 cactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgt 16812526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 200 - 343
Target Start/End: Original strand, 19562556 - 19562693
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||  |||||| ||||||||||||||| || || |||||     ||||||| |||| | || ||||||||||     
T  19562556 ctatgaagcac-gacactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacac-----tgacacctacacatataattacactgaac 19562649  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    |||| |||||| | |||| ||||   ||||||||||||||||||    
T  19562650 tatgagattttctcaaattattagcagtgtcggcgtgtcagtgt 19562693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 30359441 - 30359374
Alignment:
Q  277 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||| ||||||||| |||||||||||||||| |||| || | ||||| ||| |||||||||||    
T  30359441 cgacacttgcagttacactaaattatgtgattttttcaaattatcagttgtgccggtgtgtcagtgtc 30359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 31015097 - 31015026
Alignment:
Q  276 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||| |||||||||||||||||||||| | |||| ||||  ||||| |||| ||||||| ||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgt 31015026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 650
Target Start/End: Original strand, 9170843 - 9171009
Alignment:
Q  484 acattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggctttcgtctattgttttggactttttgatggcaacaattc 583  Q
    |||||||| ||||||||||| |  | |||| | ||||||||||||||||| ||||||||  || |||| ||| ||||||| ||||| |  || || |||     
T  9170843 acattcctatgatttatttgggtcagaacaactacctcattaatgaattgctcaatttgatttgcgtcaattattttggatttttttacagcgacgattt 9170942  T
Q  584 tcttatcatcaagttcccctttgaaaactgtaccaaaacctcctctacctatgattaagctctcatc 650  Q
    | || |||   |   | |||||| |||||||||||||||||||||| || ||||||||||| |||||    
T  9170943 tgttgtcaggtaaaactcctttgtaaactgtaccaaaacctcctctgccaatgattaagctttcatc 9171009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 21378635 - 21378561
Alignment:
Q  273 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||||| |||||||||||||||| ||||||| || | ||||  |||||||| |||||  |||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgt 21378561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 32434718 - 32434792
Alignment:
Q  273 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcgg-cgtgtcagtgtccg 346  Q
    |||| |||||||||| ||||| |||||||||||| ||||| |||| |||| |||||||||  |||||||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcggtggtgtcagtgtccg 32434792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 642
Target Start/End: Original strand, 9156222 - 9156263
Alignment:
Q  601 cctttgaaaactgtaccaaaacctcctctacctatgattaag 642  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  9156222 cctttgaaaactgtaccaaaacctcctctgccaatgattaag 9156263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 650
Target Start/End: Original strand, 9178942 - 9178991
Alignment:
Q  601 cctttgaaaactgtaccaaaacctcctctacctatgattaagctctcatc 650  Q
    |||||| |||||||||||||||||||||| || ||||||||||| |||||    
T  9178942 cctttgtaaactgtaccaaaacctcctctgccaatgattaagctttcatc 9178991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 669
Target Start/End: Original strand, 9229811 - 9229996
Alignment:
Q  484 acattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggctttcgtctattgttttggactttttgatggcaacaattc 583  Q
    ||||| || ||||||||||| || | |||| |||||||||| |||||||| || | |||| |  | || ||| |||||||||| ||||| |||||||| |    
T  9229811 acatttctatgatttatttgggacaaaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcc 9229910  T
Q  584 tcttatcatcaagttcccctttgaaaactgtaccaaaacctcctctacctatgattaagctctcatcaaagttgttagtagctttc 669  Q
    | || ||  | ||    |||||| |||| ||||| ||||||||||| || || ||||| ||||| ||| ||||||| |||||||||    
T  9229911 tgttgtctgctagaattcctttgtaaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttc 9229996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 43492431 - 43492504
Alignment:
Q  197 atcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||||||| |  ||  || |||||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  43492431 atcctatgaagcacatatgctcttcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgaca 43492504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 266  Q
    ||||||||| |||||| ||| |||||||| ||||| ||||||||||||  |||||||| ||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 26830701 - 26830641
Alignment:
Q  205 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 265  Q
    |||||| |||||| ||| |||||||| ||||||||| ||| |||||||| |||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgacac 26830641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 9690212 - 9690267
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc 254  Q
    ||||||||||||| |||||   | |||||||| |||||||||||||||||||||||    
T  9690212 cctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtc 9690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 10577740 - 10577811
Alignment:
Q  276 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||| | || |||||||| ||| ||||||||| ||||| |||||  |||||||||||||| ||||||||    
T  10577740 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgt 10577811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 19330311 - 19330370
Alignment:
Q  144 gaatagaatatttgtcataattagttataatgatttt-cctgcaattatgttgtatccta 202  Q
    ||||| |||||| ||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  19330311 gaataaaatattagtcataattaggtataattattttccctgtaattatgttgtatccta 19330370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 27965940 - 27966011
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 271  Q
    ||||||||||  |||||| ||| |||||||| |||||||||||| | |||| | |||||||||||| |||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacggacat 27966011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 35919270 - 35919317
Alignment:
Q  265 ccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||| ||||| ||||||| || ||||||||||||||||||||||||    
T  35919270 ccgacacgacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 40181984 - 40181922
Alignment:
Q  205 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccga 268  Q
    |||||||| |||| ||| |||||||| ||||||||||| |||||||||| ||||| ||||||||    
T  40181984 aagcacag-cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccga 40181922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 42359391 - 42359438
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    ||||||||| |||||| ||| |||||||| ||||||||||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 42359438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 51410121 - 51410074
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||| |||| |||||||||| |||||||||||| ||||||||||    
T  51410121 gattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgaca 51410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 2218347 - 2218297
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 250  Q
    ||||||||||| |||||| |||||||||||| |||||  ||||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacg 2218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 8117098 - 8117052
Alignment:
Q  266 cgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||| | ||||||| ||||||||||||||||| ||||||    
T  8117098 cgacatgacaccaatacttgtaattacactgaattatgtgttttttt 8117052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 12443478 - 12443536
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||||||||| | |||| ||||  |||||||||||||| || |||||    
T  12443478 ttacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgt 12443536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 14359529 - 14359594
Alignment:
Q  278 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||| ||||||| |||||||||| ||||| |||| ||||  |||||||||||||| |||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgtccgtgtc 14359594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 16812675 - 16812629
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcgga 246  Q
    ||||||||||| |||||| |||||||||||| ||||||||| |||||    
T  16812675 ctatgaagcacggacactcctcagattaggcgtgtcccggtttcgga 16812629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 17754379 - 17754301
Alignment:
Q  262 acaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag 340  Q
    |||||||||  |||| ||||| | ||||||||||||||||||| ||||||| |||| ||||   ||||||| |||||||    
T  17754379 acaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcag 17754301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 19326909 - 19326939
Alignment:
Q  363 gttgtatcataattagatagttgacctacac 393  Q
    |||||||||||||||||||||||||||||||    
T  19326909 gttgtatcataattagatagttgacctacac 19326939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 34298477 - 34298419
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||||||||| | |||| |||| | ||||||| |||||||| |||||    
T  34298477 ttacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgt 34298419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 5927281 - 5927350
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||| |||||| ||||||||||||||||  || |||||||||  |||| |||| ||||| ||||    
T  5927281 tatgaagcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgaca 5927350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 13011223 - 13011288
Alignment:
Q  279 acacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||| ||||||| |||||||||| |||||| |||| ||||  ||||||||| |||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgt 13011288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 15641045 - 15641106
Alignment:
Q  286 tagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||| |||||||||| | |||| ||||   |||||||| |||||||||||||    
T  15641045 tagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 18190114 - 18190159
Alignment:
Q  277 cgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    ||||||||||| |||||||||||||||| ||||||| |||| ||||    
T  18190114 cgacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 18471355 - 18471318
Alignment:
Q  275 accgacacttgtagttacactgaattatgtgatttttt 312  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgatttttt 18471318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 21366039 - 21366092
Alignment:
Q  290 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||||||| |||||||||||| ||||  |||| ||||||||| ||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgt 21366092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 267 - 347
Target Start/End: Complemental strand, 6427413 - 6427333
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||| |||||| |||| | || ||||| |||||||||||||||| | |||| ||||   |||| |||||||||||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgt 6427333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 6427631 - 6427595
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  6427631 gattaggcgtgtcccggtatcggacacgtgtcgtgtc 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 21621013 - 21620973
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    ||||||||| ||||||  |||||||||||||||||||||||    
T  21621013 gacaccgacgcttgtaaatacactgaattatgtgatttttt 21620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 28663666 - 28663626
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||||||| |||||  |||||||||||||||||    
T  28663666 gacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 30749898 - 30749854
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaa 316  Q
    ||||||||||| | || |||||||||||||||||||||| |||||    
T  30749898 gacaccgacacatataattacactgaattatgtgattttctaaaa 30749854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 30771349 - 30771305
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaa 316  Q
    ||||||||||| | || |||||||||||||||||||||| |||||    
T  30771349 gacaccgacacatataattacactgaattatgtgattttctaaaa 30771305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 33203020 - 33202956
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 266  Q
    |||||||||| | ||| ||| |||||||| |||| |||||||||| | || ||||||||||||||    
T  33203020 atgaagcacatatactcctcggattaggcgtgtcacggtgtcggatatgtatcgtgtctgacacc 33202956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 34741966 - 34741899
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg-tgtcgtgtctgacacc 266  Q
    |||||||||||| ||||||  || |||||||| |||||| |||||||||||| ||||||||| ||||||    
T  34741966 cctatgaagcacggacactcttcggattaggcgtgtccc-gtgtcggacacgttgtcgtgtcagacacc 34741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 39953147 - 39953239
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggt 364  Q
    ||||||||||| |  | ||||||| |||||||||||||| |||||| ||||   |||||||||| || |||||| |||  || ||||||||||    
T  39953147 gacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgtttccgtgtccatatccgttcttcataggt 39953239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 40525022 - 40524962
Alignment:
Q  140 gatagaatagaatattt-gtcataattagttataatgattttcctgcaattatgttgtatc 199  Q
    ||||||||||||||||| |||||||||   |||||| ||||||||  ||||||||||||||    
T  40525022 gatagaatagaatattttgtcataattgactataattattttcctataattatgttgtatc 40524962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 41877471 - 41877543
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||||| ||||||| |||||||| ||||| | |||| ||||   ||||||||||  |||||||    
T  41877471 gacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtc 41877543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 5e-67; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 481 - 662
Target Start/End: Complemental strand, 37567797 - 37567616
Alignment:
Q  481 accacattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggctttcgtctattgttttggactttttgatggcaacaa 580  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||     
T  37567797 accacattcctatgatttatttgagagacaatgtccacctcattaatgaattgttcattttggctttcatctattgttttggattttttgatagcaacag 37567698  T
Q  581 ttctcttatcatcaagttcccctttgaaaactgtaccaaaacctcctctacctatgattaagctctcatcaaagttgttagt 662  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  37567697 ttctattatcatctagtttccctttgaaaactgtaccaaaacctcctctacctatggttaagttctcatcaaagttgttagt 37567616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 200 - 345
Target Start/End: Complemental strand, 24339772 - 24339627
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| | |||| ||| |||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 24339673  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||||||||||| |||| ||||  ||||||||||||||| |||||    
T  24339672 tatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtcc 24339627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 199 - 343
Target Start/End: Complemental strand, 7438837 - 7438693
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||   ||||||| |||||  |||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  7438837 cctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaa 7438738  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    |||||||||||||| |||| ||||  ||||||||| |||||||||    
T  7438737 ttatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 43027404 - 43027545
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| ||||||  || |||||||| ||||||||||||||||||||||||||||||||||      |||||||||||||||| |||||||| ||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac------gacaccgacacttgtatttacactgcat 43027497  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| |||| ||||  || |||| |||||||||||||||    
T  43027498 tatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgt 43027545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 199 - 345
Target Start/End: Original strand, 5409770 - 5409910
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||      |||||| |||||||||||||||| || |||||||    
T  5409770 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttgtaattgcactgaa 5409863  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    |||||||||||||| |||| ||||  ||| || ||||||||||||||    
T  5409864 ttatgtgattttttcaaattattagctgtatcagcgtgtcagtgtcc 5409910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 200 - 338
Target Start/End: Complemental strand, 25822785 - 25822647
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||| ||| |||||| || ||||||||||||||||| |||| ||||||||||||||| || ||||| | |||||||||||||||| |||||||||||    
T  25822785 ctatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaat 25822686  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    | ||   |||||| |||| |||| |||||||||||||||    
T  25822685 tgtgattttttttcaaattattagttgtgtcggcgtgtc 25822647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 202 - 322
Target Start/End: Original strand, 26033392 - 26033512
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||| ||| |||||| ||| |||||||  |||| |||| ||||||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaatta 26033491  T
Q  302 tgtgattttttaaaataatta 322  Q
    ||||||||||| |||| ||||    
T  26033492 tgtgattttttcaaattatta 26033512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 11665406 - 11665508
Alignment:
Q  237 cggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtg 336  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||| || ||| |||||||||||||||||||| |||| |||| ||||||| |||||    
T  11665406 cggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtg 11665505  T
Q  337 tca 339  Q
    |||    
T  11665506 tca 11665508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 253 - 344
Target Start/End: Original strand, 9408316 - 9408407
Alignment:
Q  253 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||||| | |||||||||||||||| ||||||| |||||||||||||||| |||| |||| ||||||||| |||||||||||    
T  9408316 tcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 598327 - 598257
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 598257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 199 - 317
Target Start/End: Complemental strand, 9778625 - 9778513
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||  |||||||| |||||||||||||||||||||| ||||      |||||| |||||||||||||||| ||| ||||||    
T  9778625 cctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgt------ccgacacgacaccgacacttgtaattatactgaa 9778532  T
Q  299 ttatgtgattttttaaaat 317  Q
    |||||||||||||| ||||    
T  9778531 ttatgtgattttttcaaat 9778513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 205 - 347
Target Start/End: Complemental strand, 13770810 - 13770674
Alignment:
Q  205 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 304  Q
    |||||| ||||||  || |||||||| ||| |||||||||||||||||| ||||| |||||      |||| ||||||||||| ||||||||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac------gacaacgacacttgtaattacactgaattatgt 13770717  T
Q  305 gattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
     ||||||| |||| ||||  ||||||||||| |||||||||||    
T  13770716 aatttttttaaattattagctgtgtcggcgtatcagtgtccgt 13770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 232 - 365
Target Start/End: Complemental strand, 32308218 - 32308079
Alignment:
Q  232 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 331  Q
    |||| |||||||||||| ||||||||||  ||||||||| ||||| ||||| |  | |||||||||||||||||||||| | |||| ||||   ||||||    
T  32308218 tgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcg 32308119  T
Q  332 gcgtgtcagtgtc------cgtatttgtgcttcataggtt 365  Q
    |||||||||||||      |||||||||||||||||||||    
T  32308118 gcgtgtcagtgtccatgttcgtatttgtgcttcataggtt 32308079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 32093954 - 32094061
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtccc-ggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||  ||||| ||| |||||||| |||||| |||||||||||||||||||||| |||||      |||||||||| ||||| ||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac------gacaccgacatttgtaattacactgaa 32094047  T
Q  299 ttatgtgatttttt 312  Q
    ||||||||||||||    
T  32094048 ttatgtgatttttt 32094061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 2334379 - 2334268
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||| ||| |||||| ||| |||||| | |||  | |||||||||| |||||||||| ||||| |||| |||||||||||||||| ||||||| |||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac-gacacgacaccgacacttgtaattacactaaat 2334281  T
Q  300 tatgtgatttttt 312  Q
    |||||||||||||    
T  2334280 tatgtgatttttt 2334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 344
Target Start/End: Original strand, 6630849 - 6630985
Alignment:
Q  208 cacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgat 307  Q
    |||| ||||| |||||||||||  ||||  |||||||| ||||||| ||||| |||||| ||| |||| |||||| | || ||||||||||||| ||||     
T  6630849 cacacacactcctcagattaggtgtgtcttggtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgac 6630948  T
Q  308 tttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||| | |||| |||| | |||||||||||||||||||    
T  6630949 tttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 312
Target Start/End: Complemental strand, 21560613 - 21560521
Alignment:
Q  220 tcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    ||||||||||| |||  ||||||  |||| || |||||| ||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  21560613 tcagattaggcgtgtttcggtgttagacatgtatcgtgtttgacaccgatacgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 267 - 347
Target Start/End: Complemental strand, 27945104 - 27945024
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||| |||||||||||||||| |||||||||||||||| ||||| | |||| |||| | ||||||||||||||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgt 27945024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 11272569 - 11272659
Alignment:
Q  254 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaat--tatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 342  Q
    |||||| |||||||||| |||||||||||||||| |||||||||||  ||||||||||||| |||| || | |||||||||||| ||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcgtctcagtg 11272659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 21880271 - 21880201
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||| |||||||||| |||||||| ||||| ||||||||||| |||||||||| ||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgaca 21880201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 219 - 344
Target Start/End: Complemental strand, 15902933 - 15902808
Alignment:
Q  219 ctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaata 318  Q
    |||| |||| || ||||| ||| |||| || |||||||||| || |||||||  |||||||||| | || ||||||| |||||||||||||| | ||||     
T  15902933 ctcaaattaagcgtgtcctggtctcgggcatgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaatt 15902834  T
Q  319 attatttgtgtcggcgtgtcagtgtc 344  Q
    |||||| |||||||| ||||||||||    
T  15902833 attattggtgtcggcatgtcagtgtc 15902808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 25481960 - 25481887
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||    
T  25481960 gacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtcc 25481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 243 - 344
Target Start/End: Original strand, 26329354 - 26329455
Alignment:
Q  243 cggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 342  Q
    |||||||||||||||||||||||||||| ||| ||||||| | || |||||||||||| |||| |||| | |||| ||||    ||||||||||||||||    
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtg 26329453  T
Q  343 tc 344  Q
    ||    
T  26329454 tc 26329455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 11061076 - 11061152
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||||||| ||| ||| |||||||||||||||| |||| ||||  |||||||| ||||||||||||||    
T  11061076 tgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgt 11061152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 15680931 - 15680794
Alignment:
Q  197 atcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactg 296  Q
    |||||||||||||| |||||| |||  ||||| | |||| |||||||||||||||||||||||            ||||||||||||| || |||||||     
T  15680931 atcctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtc-----------cgacaccgacacttataattacacta 15680843  T
Q  297 aattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||||||||||||||  ||| ||||  | |||||||||||||||||||    
T  15680842 aattatgtgattttttttaattattagctatgtcggcgtgtcagtgtcc 15680794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 18039067 - 18039017
Alignment:
Q  262 acaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtgatttttt 18039017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 21864927 - 21864857
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||||||||||| |||  ||||| | |||||||||||||||||||||||||||| |||| |||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgaca 21864857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 3991382 - 3991322
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcgg 332  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||| |||| |||||||||    
T  3991382 gacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcgg 3991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 267 - 347
Target Start/End: Original strand, 18215182 - 18215262
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||| ||||||||||||||||  ||||||| ||||||||||||||| |||| ||||  || |||||||||| |||||||||    
T  18215182 gacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgt 18215262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 4795018 - 4794915
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    ||||||||||||||||||||  |||||| | |||   |||||| || |||||||||||| |||||||| | |  |||||||||| || ||||||||||||    
T  4795018 tatgaagcacagacacttcttggattagacgtgtttaggtgtcagatacgtgtcgtgtccgacaccgatacggtaccgacacttataattacactgaatt 4794919  T
Q  301 atgt 304  Q
    ||||    
T  4794918 atgt 4794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 24105732 - 24105661
Alignment:
Q  276 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||| ||||||||||| |||  ||||||| |||| ||||  |||||||||||||||||||||||    
T  24105732 ccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 24105661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 19213861 - 19213811
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  19213861 gacaccgacacttgtatttacactgcattatgtgattttttaaaattatta 19213811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 21568561 - 21568611
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 250  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  21568561 ctatgaagcacagacactcctcagattaagcatgtcccggtgtccgacacg 21568611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 361
Target Start/End: Complemental strand, 23191955 - 23191865
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcata 361  Q
    |||||| || || |||| |||||||||| ||||||||||| | |||| ||||   |||||||||| ||||||||||||| |||||||||||    
T  23191955 tgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgtatatgtgcttcata 23191865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 27229264 - 27229350
Alignment:
Q  224 attaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 310  Q
    ||||||| |||||  |||||| |||||| ||||||||||||  |||| |||||||| |||| || ||||||| ||||||||||||||    
T  27229264 attaggcgtgtcctagtgtcgaacacgtatcgtgtctgacagtgacacgacaccgatacttataattacactaaattatgtgatttt 27229350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 13300479 - 13300418
Alignment:
Q  261 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    ||||||||||||||||||| ||| ||| |||||||||||||| ||||||||| |||| ||||    
T  13300479 gacaccgacatgacaccgagactggtaattacactgaattatatgattttttcaaattatta 13300418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 22484143 - 22484074
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||| |||||||||| ||| || |||||| || ||||||||| ||||| |||||||||||||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgaca 22484074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 32287404 - 32287473
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||| |||||| ||| |||||||  |||||||||||||||||| |||| |||| ||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgaca 32287473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 1433578 - 1433437
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||| | ||||| |||||||||||| |||| |||      |||||| ||||||||||| | || ||||||  |||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgt------ccgacacgacaccgacacatataattacaccaaat 1433485  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
     |||||||||| | |||| ||||   |||||||||||||| |||||||    
T  1433484 gatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgt 1433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 7197298 - 7197370
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||||| ||||| |||||||  ||||||||| |||| ||||  ||||||||||||||| ||||    
T  7197298 gacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtc 7197370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 8234204 - 8234132
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||| ||||||||  ||||||||||||||| ||||||| |||| |||| ||||||||| ||||| |||||    
T  8234204 gacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcggtgtgtctgtgtc 8234132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 18213034 - 18213110
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttt-ttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||| | || ||||||| |||||||||||||| | |||| ||||| |||||||||||| |||||||||||    
T  18213034 gacaccgacacatataattacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgt 18213110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 22602705 - 22602781
Alignment:
Q  266 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 342  Q
    ||||| ||||||||||| | || |||||||||||||||||||||| | ||||||||    |||||||||||||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtg 22602781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 33994271 - 33994199
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||||||||| || |||||||||||||||  |||| |||| | || ||| ||||||||||||||||    
T  33994271 tgacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgt 33994199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 347
Target Start/End: Complemental strand, 43250118 - 43249976
Alignment:
Q  205 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacat-gacaccgacacttgtagttacactgaattat 302  Q
    |||||| |||||| |||  ||||||| ||||| ||||||||||||| ||| ||||| ||| | ||||  ||||| ||||||| || |||||||| |||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacgc-gacaccgacac-gacacttataattacactgtattat 43250021  T
Q  303 gtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    || ||||| | |||| |||||  ||||||||||||||||||||||    
T  43250020 gtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgt 43249976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 21930735 - 21930609
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||  ||| |||| ||||||||||| | |||||  |||| |||| |||| ||||||||||| ||| | |||||||| | ||||||| |||| ||||    
T  21930735 gattaggtgtgttccggcgtcggacacgtcttgtgtccaacactgacacgacatcgacacttgtaattaaaatgaattatctaatttttt-aaattatta 21930637  T
Q  323 tttgtgtcggcgtgtcagtgtccgtatt 350  Q
      || |||||||||||||||||| ||||    
T  21930636 gctgagtcggcgtgtcagtgtccatatt 21930609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 35862022 - 35861951
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||| |||||||  | ||||| |||||||||||||||||| |||| |||| |||||||||||||| |||||    
T  35862022 gacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 6028735 - 6028633
Alignment:
Q  220 tcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataa 319  Q
    ||||||||||| |||| | |||||| || ||||||||||  ||||| |||| |||||||||| ||||| ||||| | |||||||| || |||| |||| |    
T  6028735 tcagattaggcgtgtctcagtgtcgaactcgtgtcgtgttcgacactgacacgacaccgacatttgtaattacattaaattatgttatattttcaaatta 6028636  T
Q  320 tta 322  Q
    |||    
T  6028635 tta 6028633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 29763129 - 29763187
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgt 258  Q
    ||||||||||| |||||| ||| |||||||| ||||| | |||||||||||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 38804489 - 38804567
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacatgacacc 277  Q
    |||||||||||| ||||| ||| ||||||||||||||||| |||||||||  ||| ||||| |||||| ||| ||||||    
T  38804489 ctatgaagcacatacactcctcggattaggcatgtcccggcgtcggacacacgtcggtgtccgacaccaacacgacacc 38804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 40287306 - 40287356
Alignment:
Q  204 gaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc 254  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||| |||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 13557750 - 13557817
Alignment:
Q  280 cacttgtagttacactgaattatgtga---ttttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||| ||||||||||||||||||   |||||| |||| |||| || ||||||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtc 13557817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 19206162 - 19206033
Alignment:
Q  218 tctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaat 317  Q
    ||||||||||| | | | |||||||| || | ||||| | ||||||||| ||| ||||||||||| | || ||| | |||||||||||||||| | ||||    
T  19206162 tctcagattagccgtattccggtgtcagatatgtgtcatctctgacaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaat 19206063  T
Q  318 aattatttgtgtcggcgtgtcagtgtccgt 347  Q
     ||||   ||||||||||||  ||||||||    
T  19206062 tattagcggtgtcggcgtgttggtgtccgt 19206033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 365
Target Start/End: Complemental strand, 28155628 - 28155535
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggtt 365  Q
    |||||||||||||||| |||||| ||||||||| ||||| | |||| ||||   ||||||||||||  | ||| ||||  ||||||||||||||    
T  28155628 gacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgttcgagtcagtatccgtgcttcataggtt 28155535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 3520327 - 3520415
Alignment:
Q  256 tgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||| ||||| ||||||||| | || ||||| |||||||| ||||||| | |||| |||||  ||||| |||||||| ||||    
T  3520327 tgtctgacaccaacatgtcaccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtcaatgtc 3520415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 18013018 - 18013150
Alignment:
Q  215 acttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaa 314  Q
    |||||||||| ||||  |||||  ||||||||||||   | ||||||| |  |||| ||||| ||||| | || |||||||||||||||| ||||||| |    
T  18013018 acttctcagagtaggtgtgtccatgtgtcggacacgacacatgtctgaaatagacacgacactgacacatataattacactgaattatgtaattttttta 18013117  T
Q  315 aataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||| |||| | ||||| |  |||||||||||||    
T  18013118 aattattagtagtgtcagaatgtcagtgtccgt 18013150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 40287361 - 40287428
Alignment:
Q  275 accgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||||| |||||||||| ||| ||||||||| |||| |||  ||||||||||||||| ||||    
T  40287361 accgacacttgtaattacactgaa-tatatgattttttcaaattattcgttgtgtcggcgtgtccgtgt 40287428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 1656717 - 1656674
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcgg 332  Q
    |||||||||||||||||||||||||||| | ||| |||||||||    
T  1656717 ttacactgaattatgtgattttttaaaaaatttagttgtgtcgg 1656674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 7133212 - 7133283
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgaca 270  Q
    ||||||||||| ||| || |||||||||||  |||||| |||||||||||| ||| ||||| ||||||||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgaca 7133283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 18215144 - 18215187
Alignment:
Q  207 gcacagacacttctcagattaggcatgtcccggtgtcggacacg 250  Q
    |||| |||||| |||||||||||| |||||||||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacacg 18215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 22868083 - 22868028
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||||||||||| | | || |||| | |||||||||||||||||||    
T  22868083 ttacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtc 22868028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 26733362 - 26733287
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||| | || ||| |||||||||||||||||| | |||| ||||   |||||| |||||||||||||||    
T  26733362 gacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgt 26733287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 33994308 - 33994261
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||| |||| |||||| ||||| |||||||||||||||||||||    
T  33994308 gattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgaca 33994261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 323
Target Start/End: Original strand, 38134335 - 38134458
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||| ||||| ||| |||||||| ||||||| ||||| | || | ||| |||  ||||| |||||| |||||||| | |  ||||| |||||    
T  38134335 ctatgaagcacatacactcctcggattaggcgtgtcccgatgtcgaatacttatcgagtccaacacccacatgagaccgacacatatgattacattgaat 38134434  T
Q  300 tatgtgattttttaaaataattat 323  Q
    ||||| ||||| | |||| |||||    
T  38134435 tatgtcattttctcaaattattat 38134458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 1401143 - 1401076
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccga 268  Q
    |||||||||||  |||||| |||||||||||  ||||||| |||||||||  ||||||||| ||||||||    
T  1401143 cctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccga 1401076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 5835366 - 5835296
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||| ||||| | ||||||||| ||||| || ||||||||| || ||||| |||| |||||||||||||||    
T  5835366 ctataaagcaaaaacacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgaca 5835296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 17852126 - 17852060
Alignment:
Q  193 ttgtatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    |||||| ||||||||||| |||||| |||  ||||||  |||| |||||||||||||||||| ||||    
T  17852126 ttgtatactatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtc 17852060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 18212973 - 18213043
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||||||||||| ||| ||| |||| |||||| ||||| || | | |||||||| ||||||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgaca 18213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 339
Target Start/End: Complemental strand, 21831883 - 21831768
Alignment:
Q  222 agattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatt 321  Q
    ||||||| | |||| || ||||| ||| ||||||||| |||||||||||||||||  |||| ||   ||||||||  ||||||||||||| ||||| |||    
T  21831883 agattagacttgtctcgatgtcgcacatgtgtcgtgtttgacaccgacatgacactaacacatg--attacactgttttatgtgatttttaaaaattatt 21831786  T
Q  322 atttgtgtcggcgtgtca 339  Q
      | |||||||| |||||    
T  21831785 tgtggtgtcggcatgtca 21831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 40131939 - 40131989
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 250  Q
    |||||||||||||||||| ||| |||||| | |||||| ||||||||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacacg 40131989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 41020537 - 41020483
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||| |||||||||||||||  |||| |||| |||||||| |||||||||||    
T  41020537 ttacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagtgt 41020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 640172 - 640127
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaa 316  Q
    |||||||||||| | || ||||||||||||||||||||| ||||||    
T  640172 tgacaccgacacatataattacactgaattatgtgatttgttaaaa 640127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 1885648 - 1885591
Alignment:
Q  255 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    ||||| |||||| ||| |||||||||||||||  ||||| |||||||||| |||||||    
T  1885648 gtgtccgacaccaacacgacaccgacacttgtgattacattgaattatgtcatttttt 1885591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 5835306 - 5835233
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||| | || |||||||||||||||| ||||| | |||  |||| | |||||||||| ||||||||    
T  5835306 tgacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtc 5835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 6490835 - 6490786
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    ||||||||||| |||||| ||| ||||| || ||||||||||||||||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 7058490 - 7058429
Alignment:
Q  266 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgt 327  Q
    ||||| |||||| ||||||||| |||||||||||||  ||||||||| |||| |||| ||||    
T  7058490 cgacacgacaccaacacttgtaattacactgaattacatgattttttcaaattattagttgt 7058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 22484084 - 22484011
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||| | || ||| |||||||||||  ||||| |||||| ||||   |||||||||||||||||||    
T  22484084 tgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtc 22484011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 22801697 - 22801774
Alignment:
Q  227 aggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 304  Q
    |||| |||||| ||||| |||| |||| ||||| ||||| ||||  ||||||||||||||  ||||| ||||||||||    
T  22801697 aggcgtgtcccagtgtccgacaagtgtggtgtcagacactgacaatacaccgacacttgtgattacagtgaattatgt 22801774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 24105797 - 24105740
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtg 257  Q
    |||||||||||| ||||| ||| | |||||| |||||||||||||||||| ||| |||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtg 24105740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 35750010 - 35749957
Alignment:
Q  196 tatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    |||||||||||||||||||||| ||| || ||||  ||||||||| ||||||||    
T  35750010 tatcctatgaagcacagacactcctccgactaggtgtgtcccggtttcggacac 35749957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 37742599 - 37742506
Alignment:
Q  254 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||| |||||||| ||||||||||||| | |  ||||| ||||| |||  ||||| | |||| |||| | ||||||||||| ||||||||||    
T  37742599 cgtgtccgacaccgatatgacaccgacacatattattacattgaatcatgaaattttgttaaattattagtggtgtcggcgtggcagtgtccgt 37742506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 48438605 - 48438564
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||| |||| ||||| ||||||||||||||||||    
T  48438605 tgacaccgacacgtgtaattacattgaattatgtgatttttt 48438564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 14729822 - 14729770
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtg 252  Q
    |||||||| || |||||| ||| ||||| || |||||||||||||||||||||    
T  14729822 ctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacacgtg 14729770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 21826331 - 21826259
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||| | |  ||| ||||| |||||||||||||| |||| |||| | |||||||||||| ||||||    
T  21826331 gacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtc 21826259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 84)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 200 - 349
Target Start/End: Original strand, 15816058 - 15816207
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||  ||||||||||| |||||| ||| ||||||||||||| || ||||||| |||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaat 15816157  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  15816158 tatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtat 15816207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 22652106 - 22651959
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||| | |||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| ||| | |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  22652006 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 22651959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 29510232 - 29510380
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||| |||||||  ||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||| ||| ||||||    
T  29510232 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaa 29510331  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    || ||||||||||| |||| ||||  |||||||||||||||||||||||    
T  29510332 ttttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 29510380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 201 - 338
Target Start/End: Original strand, 29447040 - 29447177
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| |||||| ||  |||||||| ||||| |||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatt 29447139  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    |||||||||| | |||| |||| |||||||| ||||||    
T  29447140 atgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 199 - 344
Target Start/End: Original strand, 4673353 - 4673498
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||||||||||||| ||  |||||||| ||| ||||||||||| | | |||||||| |||| | ||| ||||| || ||||||| ||||||||||    
T  4673353 cctatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaa 4673452  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    || | ||||||||| |||| ||||| ||||||||||||||||||||    
T  4673453 ttttatgattttttcaaattattatctgtgtcggcgtgtcagtgtc 4673498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 199 - 344
Target Start/End: Complemental strand, 8343447 - 8343302
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||||||||||  || |||||||| |||||||||||||||||||||||||||| |||||    | ||||| |||||||||| ||||||| ||    
T  8343447 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaa 8343348  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||| |||| ||||  | |||||| ||||| |||||    
T  8343347 ttatgtgattttttcaaattattagctatgtcggtgtgtcggtgtc 8343302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 347
Target Start/End: Original strand, 2572017 - 2572132
Alignment:
Q  232 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 331  Q
    ||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||| ||||||| |||||||||||||||| |||| ||||  |||||||    
T  2572017 tgtcccggtatcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcg 2572116  T
Q  332 gcgtgtcagtgtccgt 347  Q
     |||||| || |||||    
T  2572117 acgtgtcggtatccgt 2572132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 36450694 - 36450830
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||||||||| ||| |||||||| ||||| ||||||||||||| |||||||| |||||| |||           |||||| |||||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctaca-----------cttgtaattacactgaat 36450782  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    | ||||||||||| |||| |||| ||||||||||||||||||||||||    
T  36450783 tctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 36450830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 29447574 - 29447467
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||| | |||||||||||||||||| |||||||||||||||||||| |||||| |||| | || ||||||| |||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaat 29447475  T
Q  300 tatgtgat 307  Q
    ||||||||    
T  29447474 tatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 199 - 344
Target Start/End: Original strand, 22197670 - 22197815
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca-tgacaccgacacttgtagttacactga 297  Q
    ||||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||| |||| |||| ||||| |||||| |||||||||| ||||||| |    
T  22197670 cctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgaca-cgacactgacactgacacttgtaattacactaa 22197768  T
Q  298 attatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||| ||||| |||| ||||  ||||| ||||||| ||||||    
T  22197769 attatgtgaatttttcaaattattagctgtgttggcgtgttagtgtc 22197815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 200 - 322
Target Start/End: Complemental strand, 21465542 - 21465420
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| |||| ||||||| | |||| |||| |||||||||||||||| ||||| |||| |||||| ||||||||| |||||  ||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaat 21465443  T
Q  300 tatgtgattttttaaaataatta 322  Q
    ||| ||||||||| |||| ||||    
T  21465442 tatatgattttttcaaattatta 21465420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 20873127 - 20873052
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| ||||| | |||||||||||||||||||||    
T  20873127 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgt 20873052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 26902104 - 26902214
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||||||| |||| |||||| ||| | ||||||||||||||| |||||  | | ||||||||||| | || |||||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaat 26902203  T
Q  300 tatgtgatttt 310  Q
    |||||||||||    
T  26902204 tatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 200 - 322
Target Start/End: Complemental strand, 28745628 - 28745506
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||   ||||| | |||| ||||| |||||| |||||||||| |||||||||| |||| ||||| ||||||||||| |||||    
T  28745628 ctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacacgacatcgacatttgtagttacattgaat 28745529  T
Q  300 tatgtgattttttaaaataatta 322  Q
    ||||||| ||||| |||| ||||    
T  28745528 tatgtgaatttttcaaattatta 28745506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 199 - 349
Target Start/End: Complemental strand, 5813712 - 5813573
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||| ||||||| |||||| |||  ||||||| ||||||||||||||||||||||||||||            |||||||||||||||| ||||||| ||    
T  5813712 cctacgaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtc-----------cgacaccgacacttgtatttacactaaa 5813624  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
     ||||||| ||||| |||| ||||  |||||||||||||| ||||||||||    
T  5813623 atatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccgtat 5813573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 261 - 345
Target Start/End: Original strand, 13436954 - 13437038
Alignment:
Q  261 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    |||||||||| |||||||||||||||  ||||  |||||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  13436954 gacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 13437038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 11686071 - 11686012
Alignment:
Q  138 atgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgta 197  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||    
T  11686071 atgatagaatagaatatttgtcataattagttttaatgatttccctgtaattatgttgta 11686012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 200 - 335
Target Start/End: Original strand, 11927015 - 11927150
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| ||||||  || |||||||| |||| || ||| ||| || |||||||| ||||||| ||| ||||||||||| | || |||||||||||    
T  11927015 ctatgaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaat 11927114  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgt 335  Q
    ||||||||||| | |||| ||||   ||||||||||    
T  11927115 tatgtgattttatcaaattattaacagtgtcggcgt 11927150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 41838131 - 41838201
Alignment:
Q  279 acacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||  ||||||| |||||||||||||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtat 41838201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 200 - 337
Target Start/End: Complemental strand, 11944795 - 11944658
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||  |||||  || |||||||| |||| |||||||||| || |||||||| ||||| | ||| ||||||||||| | || ||||||||| |    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagt 11944696  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgt 337  Q
    ||||||||||| | |||| ||||   ||||||||||||    
T  11944695 tatgtgattttatcaaattattaacagtgtcggcgtgt 11944658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 24858135 - 24858030
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||| ||||| ||| |||||||| |||||||| || |||||| ||||||||      |||||| |||| ||||||||||| |||||||||||    
T  24858135 ctatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgt------ccgacacgacaacgacacttgta-ttacactgaat 24858043  T
Q  300 tatgtgatttttt 312  Q
    |||||||||||||    
T  24858042 tatgtgatttttt 24858030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 44206337 - 44206277
Alignment:
Q  139 tgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 199  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  44206337 tgatagaatagagtattagtcataattagttataattattttcctgtaattatgttgtatc 44206277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 18170483 - 18170558
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||| ||||| ||||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||    
T  18170483 gacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgt 18170558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 18634051 - 18634126
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||| ||||| ||||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||    
T  18634051 gacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgt 18634126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 22596052 - 22595981
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    |||||| ||||||||| |||||||||||||||| ||||||| |||| ||||  |||||||||||||||||||    
T  22596052 gacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 267 - 346
Target Start/End: Original strand, 30271287 - 30271366
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 346  Q
    |||| ||||| | |||||||| |||||||| ||||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  30271287 gacacgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 19177405 - 19177463
Alignment:
Q  141 atagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 199  Q
    ||||||||||||||| |||||||||||||||||| ||||||||  ||||||||||||||    
T  19177405 atagaatagaatattagtcataattagttataattattttcctctaattatgttgtatc 19177463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 41831946 - 41832012
Alignment:
Q  277 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||| |||| ||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcggcatgtctgtgt 41832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 25566910 - 25566849
Alignment:
Q  261 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  25566910 gacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 25566849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 926730 - 926798
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||| |||||| ||| ||| | ||||||||||||||||||||||||||| ||| ||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgaca 926798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 4786339 - 4786411
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||| | || |||||||||||||||||||||| | |||| |||| | |||||||||||||||||||    
T  4786339 gacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 18964309 - 18964163
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacac--cgacacttgtagttacactga 297  Q
    |||||||||||||||||| ||| ||| |||| |||| | ||||  |||| |||||||||   || |||||| |||||  |||||| | || ||||| |||    
T  18964309 ctatgaagcacagacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgttcaacgccgacacgacacaccgacacatataattacattga 18964210  T
Q  298 attatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||||| ||||| ||||| |||| | | ||||||||||||    
T  18964209 attatgtgattttctaaaaaaattagttgtcttgacgtgtcagtgtc 18964163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 343
Target Start/End: Original strand, 24727684 - 24727826
Alignment:
Q  203 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 302  Q
    ||||||||  ||||||||| |||||||| ||| | ||| | ||||||||||| |||  || |||||||||||||  ||||||| | |||||||| |||||    
T  24727684 tgaagcacgaacacttctcggattaggcgtgttctggtattggacacgtgtcatgttcgataccgacatgacactaacacttgaaattacactgcattat 24727783  T
Q  303 gtga--ttttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    || |  |||||| |||| |||| |||||| | |||||||||||    
T  24727784 gtaattttttttcaaattattagttgtgttgacgtgtcagtgt 24727826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 25192350 - 25192425
Alignment:
Q  274 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    ||||||||||| || ||| |||||||||||| | ||||| |||| ||||  |||||||||||||||||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtat 25192425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 200 - 333
Target Start/End: Original strand, 27067231 - 27067360
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| ||||||  | || |||||||  ||||| ||||||||| |||||||||| ||||| |||||||||| |||||  ||||    
T  27067231 ctatgaagcacggacactcctcggattag--acgttccggtgttcgacacatgtcgtgtccgacaccgacacgacactgacacttgtaattaca--gaat 27067326  T
Q  300 tatgtgattttttaaaataattatttgtgtcggc 333  Q
    ||||| ||||| | |||| |||| | ||||||||    
T  27067327 tatgtaattttctcaaatcattagtggtgtcggc 27067360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 271 - 342
Target Start/End: Complemental strand, 31557055 - 31556985
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 342  Q
    ||||||||| ||||||| ||||||||||||||||||| |||| |||| ||||  ||||||||||||||||||    
T  31557055 tgacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 337
Target Start/End: Original strand, 4298886 - 4298952
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgt 337  Q
    ||||||||||||||||| ||||| | |||||||||||||||| |||| ||||  |||||||||||||    
T  4298886 tgacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgt 4298952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 4948710 - 4948660
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  4948710 gacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 310
Target Start/End: Complemental strand, 11803389 - 11803279
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||| | ||| || |||||||||| ||||||| ||  ||||| |||  ||||| |||| | || |||||||||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaat 11803290  T
Q  300 tatgtgatttt 310  Q
    |||||||||||    
T  11803289 tatgtgatttt 11803279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 310
Target Start/End: Original strand, 12570458 - 12570547
Alignment:
Q  220 tcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 310  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||||| |  ||| |||||| | || ||||||| ||||||||| ||||    
T  12570458 tcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgata-cacatcgacacatataattacacttaattatgtgttttt 12570547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 28384977 - 28385070
Alignment:
Q  254 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||| |||||||||||||||| | || ||||||||||||||| ||||| || | || ||||   |||||||  |||||||||||||    
T  28384977 cgtgtctgacactgacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgt 28385070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 360
Target Start/End: Original strand, 6065586 - 6065746
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||   |||| || ||| ||||||||||||| |||||||||| ||||  |||| || |  ||  | |||| ||| |||| ||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgacattgacacgatattgattcatgtaattatactgtat 6065685  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcat 360  Q
    |||||||||||||| ||| ||||  ||| |||| ||| ||||||||||||  |||||||||    
T  6065686 tatgtgattttttagaattattaactgtatcggtgtgccagtgtccgtatccgtgcttcat 6065746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 12570684 - 12570732
Alignment:
Q  220 tcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccga 268  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||||||    
T  12570684 tcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccga 12570732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 14692528 - 14692441
Alignment:
Q  261 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    ||||| ||||||| |||||||| | ||||||||||||||||||| | ||| | |||| ||||| |||||| | ||||||||||||||||    
T  14692528 gacacagacatgataccgacacctatagttacactgaattatgtca-tttctcaaattattatctgtgtcagagtgtcagtgtccgtat 14692441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 22204700 - 22204620
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtg-at-tttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    |||||| |||||||||| |||||||||||||| |  || ||||| |||| |||| ||||||||||||||||||||||||||    
T  22204700 tgacactgacacttgtaattacactgaattatatatatattttttaaattattagttgtgtcggcgtgtcagtgtccgtat 22204620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 24362167 - 24362275
Alignment:
Q  237 cggtgtcggacacgtgtcgtgtctg-acaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgt 335  Q
    ||||| ||||||||||||||||| | ||||||||| ||||  ||||| | || |||||||||||||||||||| | | |||| ||||   ||||||||||    
T  24362167 cggtgccggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgt 24362266  T
Q  336 gtcagtgtc 344  Q
    ||| |||||    
T  24362267 gtcggtgtc 24362275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 34450961 - 34451113
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgaca-----ccgacacttgtagttacac 294  Q
    ||||||||||| |||||| ||  ||| |||| |||||| ||||| ||||||||||||||| |||||||||| ||||     ||||||| | || ||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacgacacgacaccgacacatataattacac 34451060  T
Q  295 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    || ||| |||||||||  |||| |||||  |||||| | ||||| ||| ||||    
T  34451061 tgcattttgtgattttcaaaaaaaattagctgtgtcagtgtgtcggtgcccgt 34451113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 44067644 - 44067502
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacat-gacaccgacacttgtagttacactgaat 299  Q
    ||||||||| |||||| |||  ||||||| ||||| |||||||||||||  || ||||| ||||| ||||  ||||| ||||||| || |||||||| ||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcatcagtgtccgacac-gacaccgacac-gacacttataattacactgtat 44067547  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||| ||||| | |||| |||||  |||||||||||||||||||    
T  44067546 tatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtc 44067502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 14134818 - 14134747
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 271  Q
    ||||||| ||| |||||| |||  ||||||| ||||| |||| |||||||||||||||| ||||||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacat 14134747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 18407772 - 18407705
Alignment:
Q  277 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||| ||||||||||||||||||||||||  ||| ||||  ||||||||| |||| |||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggcatgtctgtgtc 18407705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 22943301 - 22943348
Alignment:
Q  212 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 22943348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 31343660 - 31343715
Alignment:
Q  142 tagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgta 197  Q
    ||||||| |||||||||||||||||||| ||||||||| || | ||||||||||||    
T  31343660 tagaatataatatttgtcataattagttttaatgatttccccgtaattatgttgta 31343715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 272 - 363
Target Start/End: Complemental strand, 34897143 - 34897052
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatagg 363  Q
    |||| |||||| | || |||||||||||||||||||||| | |||| ||||   |||||| |||||| |||||||| | |||||||||||||    
T  34897143 gacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgtttatgtgcttcatagg 34897052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 3951476 - 3951546
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||| || ||| ||  |||||||| ||| || ||||| ||||||||||||||||||||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgaca 3951546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 4863962 - 4863904
Alignment:
Q  139 tgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgta 197  Q
    ||||||||||||||||||  ||||||||||| ||||||||| |||| ||||||| ||||    
T  4863962 tgatagaatagaatatttaccataattagttttaatgatttccctgtaattatgctgta 4863904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 8343030 - 8342980
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| ||||    
T  8343030 gacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 8343087 - 8343037
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    |||||||||||||||||||  || |||||||| ||||||||||||||||||    
T  8343087 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 342
Target Start/End: Complemental strand, 24613578 - 24613509
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 342  Q
    |||||||||||||||| ||||||| ||||||||||| |||| |||| ||||  |||||||| |||||||||    
T  24613578 gacaccgacacttgtaattacacttaattatgtgat-ttttcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 16641909 - 16641974
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 265  Q
    |||||||||||||||||| ||| |||||||  |||||||||||  ||||| ||||||||| |||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 30077388 - 30077461
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||| |||||||||| ||||||||||||||||||| |||| |||| ||||  || || |||||||| ||||||    
T  30077388 gacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtcc 30077461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 31557092 - 31557047
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccga 268  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||||    
T  31557092 gattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccga 31557047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 40332248 - 40332211
Alignment:
Q  273 acaccgacacttgtagttacactgaattatgtgatttt 310  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgatttt 40332211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 14639735 - 14639787
Alignment:
Q  205 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtg 257  Q
    ||||||||| ||| ||  |||||||||||||||||||||||||| ||||||||    
T  14639735 aagcacagatactccttggattaggcatgtcccggtgtcggacatgtgtcgtg 14639787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 20679337 - 20679405
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||  |||||| ||| | | |||| |||||||||||||||||||||| | ||||||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgaca 20679405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 24669491 - 24669419
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||||| |||||||||||||||| ||||  | |||| ||||   ||||| |||||||||||||    
T  24669491 gacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtc 24669419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 3677820 - 3677769
Alignment:
Q  296 gaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||||||||| |||| ||||||||  |||||||| |||||    
T  3677820 gaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgt 3677769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 24196628 - 24196675
Alignment:
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    ||||||||||| |||| |||| ||||||||||||||| ||||||||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtccgtat 24196675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 31514930 - 31514891
Alignment:
Q  273 acaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  31514930 acaccaacacttgtagttacgctgaattatgtgatttttt 31514891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 39820547 - 39820493
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg 255  Q
    ||||||||||| |||||||||| |||||||| |||||| |||||||||||| ||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcg 39820493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 44462158 - 44462205
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||| | ||||||||||||||||| || ||||||||||||||||||    
T  44462158 gattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgaca 44462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 44469691 - 44469738
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||| | ||||||||||||||||| || ||||||||||||||||||    
T  44469691 gattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgaca 44469738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 19177456 - 19177486
Alignment:
Q  363 gttgtatcataattagatagttgacctacac 393  Q
    |||||||||||||||||||||||||||||||    
T  19177456 gttgtatcataattagatagttgacctacac 19177486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 20679395 - 20679473
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    |||||||||||||| || |||||||||| ||||||||||| | |||| ||||   |||||| | |||||||||| ||||    
T  20679395 tgacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtctgtat 20679473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 24413499 - 24413569
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||| |||||||||| |||||| | ||||||| ||| |||||||  ||||||| ||||| ||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgaca 24413569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 27213645 - 27213595
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    |||||||||||| |||||||||| |||||| | |||||||||||| |||||    
T  27213645 cctatgaagcacggacacttctcggattagccgtgtcccggtgtccgacac 27213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Complemental strand, 44206284 - 44206254
Alignment:
Q  363 gttgtatcataattagatagttgacctacac 393  Q
    |||||||||||||||||||||||||||||||    
T  44206284 gttgtatcataattagatagttgacctacac 44206254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 310
Target Start/End: Complemental strand, 2035866 - 2035759
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| ||| || ||| |||||||  | ||||||||||||||||| |||| ||||||||||| || || | |||||| | || |||||||||||     
T  2035866 tatgaagcacggacgctactcggattaggtgtctcccggtgtcggacacgcgtcg-gtctgacaccggcacgata-cgacacctataattacactgaata 2035769  T
Q  301 atgtgatttt 310  Q
    |||| |||||    
T  2035768 atgttatttt 2035759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 38487155 - 38487212
Alignment:
Q  198 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg 255  Q
    |||||||||||||||||||| ||| ||||| |  ||||| ||||||||||||| ||||    
T  38487155 tcctatgaagcacagacactcctcggattatgtgtgtccgggtgtcggacacgcgtcg 38487212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 3025668 - 3025600
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||| |||||| ||| |||||| | |||| | ||||| ||||||||||||||| ||||| ||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgaca 3025600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 13844597 - 13844669
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||| | || ||||||| |||||||||||||| | |||| ||||   ||||||||||||| |||||    
T  13844597 gacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 18407839 - 18407779
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    |||||||||||| |||||| |||  ||||||| |||||  |||||||||| ||||||||||    
T  18407839 cctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtc 18407779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 289 - 317
Target Start/End: Complemental strand, 22493535 - 22493507
Alignment:
Q  289 ttacactgaattatgtgattttttaaaat 317  Q
    |||||||||||||||||||||||||||||    
T  22493535 ttacactgaattatgtgattttttaaaat 22493507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 31548289 - 31548345
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattat 323  Q
    |||||||||||||||| |||  ||||| |||||||||| ||||| | ||||||||||    
T  31548289 gacatgacaccgacacatgtgattacattgaattatgtcattttatcaaataattat 31548345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 40332307 - 40332251
Alignment:
Q  203 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    |||| ||| |||||| ||| ||||||||  |||||||||| ||||||||||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtc 40332251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 1e-43; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 200 - 362
Target Start/End: Complemental strand, 39698671 - 39698509
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| |||| |||||||||| || ||||||||| |||||||||| ||||| |||||||||| |||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 362  Q
    ||||||||||||| |||| ||||  |||||| ||||||||||||||||||  |||||||||||    
T  39698571 tatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgtatccgtgcttcatag 39698509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 223 - 347
Target Start/End: Complemental strand, 21522857 - 21522733
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| ||||    
T  21522857 gattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattatta 21522758  T
Q  323 tttgtgtcggcgtgtcagtgtccgt 347  Q
      |||||||||||||||||||||||    
T  21522757 gctgtgtcggcgtgtcagtgtccgt 21522733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 223 - 347
Target Start/End: Complemental strand, 21533423 - 21533299
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| ||||    
T  21533423 gattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattatta 21533324  T
Q  323 tttgtgtcggcgtgtcagtgtccgt 347  Q
      |||||||||||||||||||||||    
T  21533323 gctgtgtcggcgtgtcagtgtccgt 21533299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 204 - 350
Target Start/End: Complemental strand, 30183675 - 30183529
Alignment:
Q  204 gaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatg 303  Q
    ||||||||||||||||||  ||||||| |||||| |||||||||||||||||||||||| ||| ||| |||||||||||||||| ||| || |||| |||    
T  30183675 gaagcacagacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatg 30183576  T
Q  304 tgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatt 350  Q
    |||| |||| |||| |||| |||||||||| | |||||||| |||||    
T  30183575 tgatattttcaaattattagttgtgtcggcatatcagtgtctgtatt 30183529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 21542137 - 21542016
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| || |||| |||| ||||    
T  21542137 gattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattatta 21542038  T
Q  323 tttgtgtcggcgtgtcagtgtc 344  Q
     |||||||||| ||||| ||||    
T  21542037 gttgtgtcggcatgtcaatgtc 21542016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 31084447 - 31084309
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||| ||| |||||| ||| ||||||||||||||| ||||||||||||||||||||| |||||      |||| ||||||||||| ||||| |||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac------gacatcgacacttgtaattacattgaat 31084354  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||||| |||| ||||  ||||||||||||||||||||    
T  31084353 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 200 - 332
Target Start/End: Complemental strand, 7677835 - 7677703
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| ||| || ||| |||||||| ||||||||||||||||| ||| |||||| |||||||||| ||||||||||||| || || ||||||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaat 7677736  T
Q  300 tatgtgattttttaaaataattatttgtgtcgg 332  Q
    ||||||||||||| |||| ||||  ||||||||    
T  7677735 tatgtgattttttcaaattattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 36642691 - 36642838
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||| ||||||| |||||| |||  ||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||||| || ||||||| ||    
T  36642691 cctacgaagcaccgacactcctccaattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaa 36642789  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
     ||||| | ||||| |||| ||||  |||||||||||||||||||||||    
T  36642790 atatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgt 36642838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 201 - 347
Target Start/End: Complemental strand, 6401627 - 6401481
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| |||||| ||  ||| |||| | |||| ||||| ||||||||||||||| ||||| |||| ||||||||||| | || |||||||| |||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtatt 6401528  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
     ||||||||| ||||| | ||| ||||||||||||||| ||||||||    
T  6401527 ttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgt 6401481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 213 - 347
Target Start/End: Complemental strand, 19579818 - 19579684
Alignment:
Q  213 acacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    ||||| ||| |||||||| |||||||||||  ||||  ||||||||| ||||| |||| |||||||||||||||| || |||| |||||||||||||| |    
T  19579818 acactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttct 19579719  T
Q  313 aaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
     |||| ||||  ||||||||||| |||||||||||    
T  19579718 caaattattagctgtgtcggcgtatcagtgtccgt 19579684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 21351889 - 21351979
Alignment:
Q  255 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||  ||| |||| ||||||||| ||||||||||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 267 - 347
Target Start/End: Original strand, 13287395 - 13287475
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||| |||||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgt 13287475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 202 - 347
Target Start/End: Original strand, 21190998 - 21191132
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||||||| |||||| ||| |||||||| |||||||| ||||||||||||| ||||| ||||           |||||||||||| |||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgaca-----------ccgacacttgtaattacactgaatta 21191086  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||| |||| ||||  ||||||||| |||||||||||||    
T  21191087 tgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgt 21191132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 6247680 - 6247603
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||||||| |||||    
T  6247680 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtat 6247603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 200 - 362
Target Start/End: Complemental strand, 42893479 - 42893328
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||  |||||| |||| ||||||| ||||| |||||||||||||||| ||||||||||||||||           |||||| |||||||| ||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgaca-----------cttgtaattacactggat 42893391  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 362  Q
    ||||||||||||| |||| ||||  |||||||| ||||| |||||| |||  |||||||||||    
T  42893390 tatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtccatatccgtgcttcatag 42893328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 21814364 - 21814253
Alignment:
Q  227 aggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttg 326  Q
    |||| |||||| ||| | ||||||||||||||| |||||||||| ||||||||||| | || |||||||| ||| ||||||||| ||||| |||||  ||    
T  21814364 aggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctg 21814265  T
Q  327 tgtcggcgtgtc 338  Q
    ||||||||||||    
T  21814264 tgtcggcgtgtc 21814253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 212 - 347
Target Start/End: Complemental strand, 15382592 - 15382460
Alignment:
Q  212 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtga--ttt 309  Q
    |||||| ||| |||||||| ||||||||||||||||| ||||||||||  |||||     |||||||||||||||| ||| |||||||||| |||  |||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacacc-----gacaccgacacttgtaattatactgaattatatgattttt 15382498  T
Q  310 tttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||| |||| ||||  ||||||||||||||| |||||||    
T  15382497 tttcaaattattagctgtgtcggcgtgtcattgtccgt 15382460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 272 - 341
Target Start/End: Complemental strand, 33178083 - 33178014
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 341  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| |||| ||||||||||||||||||    
T  33178083 gacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 37328774 - 37328920
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||| ||||| || | ||||||| |||||| | |  |||||| |||||||||| ||||||||||| |||| ||||||||||    
T  37328774 cctatgaagcacggacactcctcggattaagcgtatcccggtatcggacgcat--cgtgtccgacaccgacacgacaccgacacatgtaattacactgaa 37328871  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    || ||||||||||  |||| |||   |||||||| || |||||||||||    
T  37328872 ttttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgt 37328920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 201 - 345
Target Start/End: Complemental strand, 3966632 - 3966488
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| |||||| ||| |||||| | ||||||  ||| |||||| ||| ||||| ||||| |||| ||||||||||| | || ||||||||||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaatt 3966533  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
     ||||||||| | |||| ||||   |||||||| |||||||||||    
T  3966532 gtgtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 256 - 347
Target Start/End: Original strand, 19552530 - 19552619
Alignment:
Q  256 tgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||||| |||| |||||||| ||  |||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  19552530 tgtctgacaccgacacgacatcgacacttata--tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgt 19552619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 200 - 343
Target Start/End: Original strand, 21576685 - 21576817
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| |||||| ||||| |||||||||||||||      ||||||     ||||||||||| |||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtc------cgacat-----cgacacttgtaattacactgaat 21576773  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||||| |||| ||||  ||||| ||||| |||||||    
T  21576774 tatgtgattttttcaaattattagctgtgttggcgtatcagtgt 21576817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 14674323 - 14674252
Alignment:
Q  276 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||| ||||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 14674252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 43565001 - 43564930
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||||| |||||||||| |||||||| |||||||| ||||||||| ||||||||| ||||||||||    
T  43565001 cctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgaca 43564930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 202 - 347
Target Start/End: Complemental strand, 43001922 - 43001783
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||||||| |||||| ||| |||||||| ||||| |||||  ||||||||||||||| |||||    ||  |||| ||||||||| |||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac----at--caccaacacttgtaattacactgaatta 43001829  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||| ||||||| |||| ||||   |||||| | |||||||||||||    
T  43001828 tgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgt 43001783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 10298627 - 10298539
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcat 360  Q
    |||||||||||||||| ||||| || ||||||||| ||||| |||| |||| |||||||||||||| |||||||| ||  |||||||||    
T  10298627 gacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccgcatccgtgcttcat 10298539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 24906305 - 24906373
Alignment:
Q  275 accgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||||| |||||||||||||||| ||||||| |||| ||||| ||||| |||||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgt 24906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 350
Target Start/End: Complemental strand, 12641765 - 12641654
Alignment:
Q  239 gtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    |||||| |||||||| |||||||||||| ||| ||||| ||||| || | ||| ||| |||||||||||||||| |||| ||||  | ||||| ||||||    
T  12641765 gtgtcgaacacgtgttgtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaactatgtcgacgtgtc 12641666  T
Q  339 agtgtccgtatt 350  Q
    | ||||||||||    
T  12641665 attgtccgtatt 12641654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 200 - 346
Target Start/End: Complemental strand, 30098456 - 30098310
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||| | ||| |||||||  ||||| |||||| ||||||||||||||| ||||| |||  || |||||||  | || ||||| |||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaat 30098357  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 346  Q
    ||||||||||| | |||| ||||   || ||| ||||||||||||||    
T  30098356 tatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 14873643 - 14873537
Alignment:
Q  198 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactga 297  Q
    ||||||||||||| |||||| ||| |||||||| ||||||||||| |||||||||| | ||      |||||||||||||||||| | || ||||||| |    
T  14873643 tcctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgt------ccgacatgacaccgacacatataattacactaa 14873550  T
Q  298 attatgtgatttt 310  Q
    |||||||| ||||    
T  14873549 attatgtgctttt 14873537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 30135377 - 30135305
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtc 338  Q
    ||||||||||||||||||||| ||||| ||| |||||||||| |||| |||| |||| |||||||||||||||    
T  30135377 gacatgacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtc 30135305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 344
Target Start/End: Complemental strand, 41995546 - 41995457
Alignment:
Q  253 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||| |||||||| | | |||||||||||  | ||||| ||||||||||||||||||  ||| |||| |||||||||||||||||||||    
T  41995546 tcgtgtccgacaccgatacggcaccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtc 41995457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 8420085 - 8420011
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 346  Q
    |||||||||||||||| ||||| |||||||||| ||||||| |||| ||||  | ||||||||||||| ||||||    
T  8420085 gacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccg 8420011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 32766872 - 32766982
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| |||||||||| | | ||| ||||||||||||||||||| |  |||||||||| |||||  |||| | || ||||| |||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattgaat 32766971  T
Q  300 tatgtgatttt 310  Q
    | || ||||||    
T  32766972 tgtgcgatttt 32766982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 9449513 - 9449452
Alignment:
Q  286 tagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||| |||||||||||||||| | |||| |||||| ||||||||||| ||||||||||    
T  9449513 tagttacattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgt 9449452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 199 - 344
Target Start/End: Complemental strand, 11686069 - 11685925
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||| |||||| | || |  ||| | |||||||||||||||| |||||||| | ||||||||||| | || ||||||| ||    
T  11686069 cctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaa 11685971  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||| || ||| | |||| ||||   |||||||| ||||||||||    
T  11685970 ttatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 15884046 - 15884006
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  15884046 gacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 312
Target Start/End: Complemental strand, 17088398 - 17088303
Alignment:
Q  212 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttt 311  Q
    |||||| ||| |||||||| |||||||||||||||||     |||| | |||||||||| ||||  |||||||||| | ||||| |||||||||||||||    
T  17088398 gacactcctcggattaggcgtgtcccggtgtcggaca-----cgtgaccgacaccgacacgacagtgacacttgtaatcacactaaattatgtgattttt 17088304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 27932356 - 27932288
Alignment:
Q  198 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 266  Q
    |||||||||||||| ||||| |||  ||||||| ||||| |||||| ||||||||||||||| ||||||    
T  27932356 tcctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacacc 27932288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 4105310 - 4105240
Alignment:
Q  279 acacttgtagttacactgaattatgtga--ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||| ||||||||||||||||||  |||||| |||| |||| || ||||||||||||||| |||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgt 4105240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 30502351 - 30502398
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  30502351 gattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgaca 30502398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 30542694 - 30542741
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  30542694 gattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgaca 30542741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 39268541 - 39268608
Alignment:
Q  203 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||| |||||| ||| |||||||| |||||| ||||||||||| |||||||||  |||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgaca 39268608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 41633803 - 41633724
Alignment:
Q  262 acaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 341  Q
    ||||||| | |||||||||| ||||| |||||||||||||||| | ||||| |||| ||||  |||||||| ||||||||    
T  41633803 acaccgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagt 41633724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 5894827 - 5894892
Alignment:
Q  265 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtc 330  Q
    |||||| |||||||||||||||||||| | | |||||| ||||||||| |||| |||| |||||||    
T  5894827 ccgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtc 5894892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 6770583 - 6770526
Alignment:
Q  290 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||||||||||| | |||| |||| ||||||| | ||||||||||||||    
T  6770583 tacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgt 6770526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 17177025 - 17177098
Alignment:
Q  273 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 346  Q
    ||||||||||||||| ||||| |||||| | ||||||||| |||| ||||  ||||| ||||| ||||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccg 17177098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 38464312 - 38464361
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggaca 248  Q
    ||||||||||||||||||| ||| |||||||  |||||||||||||||||    
T  38464312 cctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 327
Target Start/End: Complemental strand, 40131753 - 40131624
Alignment:
Q  198 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactga 297  Q
    ||||||||| ||| |||||| ||  || ||| | ||||||  |||| |||||  ||||||||||||| ||| | |||||||| | || || ||| |||||    
T  40131753 tcctatgaaacacggacactccttggagtagacgtgtcccaatgtcagacacaagtcgtgtctgacatcgatacgacaccgatatttataattaaactga 40131654  T
Q  298 attatgtgattttttaaaataattatttgt 327  Q
    ||||||||||||||| |||| |||| ||||    
T  40131653 attatgtgattttttcaaattattagttgt 40131624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggaca 248  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 7218271 - 7218318
Alignment:
Q  275 accgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    ||||||||||||| ||||||||||||||||||||| || |||| ||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattatta 7218318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 17123166 - 17123096
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 271  Q
    ||||||||||| |||||| ||| |||||||| |||||| |||||||||| || |||||||  ||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtccc-gtgtcggacatgtttcgtgtccaacaccgacat 17123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 21319927 - 21319986
Alignment:
Q  253 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    ||||||| ||||||||||||||| ||||||||||  ||||| |||||||| | |||||||    
T  21319927 tcgtgtccgacaccgacatgacatcgacacttgtgattacattgaattatatcatttttt 21319986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 339
Target Start/End: Original strand, 28588675 - 28588742
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 339  Q
    ||||||||||| | || |||||||||||||||||||||| | |||| ||||   ||||||||||||||    
T  28588675 gacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 15588707 - 15588632
Alignment:
Q  206 agcacagacacttctcagattaggcatgtccc---ggtgtcggacacgtgtcgtgtc--tgacaccgacatgacac 276  Q
    |||||| | |||||||||||||||| ||||||   ||||||||| |||| |||||||  |||||||||||||||||    
T  15588707 agcacatatacttctcagattaggcgtgtcccggtggtgtcggatacgtatcgtgtctttgacaccgacatgacac 15588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 22013455 - 22013397
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||| |||||||| ||||||  |||| ||||  |||||||||||||||||||||||    
T  22013455 ttacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgt 22013397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 338
Target Start/End: Original strand, 30099039 - 30099105
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    ||||||||||| | || |||||| |||||||| |||| ||||||| | ||| |||||||||||||||    
T  30099039 gacaccgacacatataattacacagaattatgcgattgtttaaaaaatttagttgtgtcggcgtgtc 30099105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 41091186 - 41091296
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||  ||||| |||||||||| | || |  |||||  ||||| ||||| ||| ||||  |||| |||| |||||| | || |||||||||||    
T  41091186 ctatgaagcacgaacactcctcagattagacgtgccttggtgttagacacatgtcgcgtccgacattgacacgacatcgacacatataattacactgaat 41091285  T
Q  300 tatgtgatttt 310  Q
    |||||||||||    
T  41091286 tatgtgatttt 41091296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 6072339 - 6072392
Alignment:
Q  297 aattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    |||||||||||| ||||||||| |||| || ||||||||||||||| |||||||    
T  6072339 aattatgtgattgttttaaaattattagttatgtcggcgtgtcagtatccgtat 6072392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 12199997 - 12199948
Alignment:
Q  263 caccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||| ||| |||||||||||||||| ||  ||||||||||||||||||||    
T  12199997 caccaacacgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 24238603 - 24238660
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    ||||||||| |||||| ||  ||||| ||||||||| |||| ||||||||||||||||    
T  24238603 atgaagcacggacactcctaggattatgcatgtcccagtgttggacacgtgtcgtgtc 24238660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 252 - 344
Target Start/End: Original strand, 12264810 - 12264902
Alignment:
Q  252 gtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||| ||||||||||| ||||||  ||||| | || ||||||||||| |||| ||||| | |||||||||   |||| ||| ||||||||||    
T  12264810 gtcgtatctgacaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagtgtc 12264902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 15410376 - 15410524
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||| ||||||  ||||| ||| | |||| | ||||||||||| |||||| |||||| ||  ||| |||||  ||||| |||| | |  ||||||||||    
T  15410376 cctattaagcacgaacactcctcggcttagacgtgtcccggtgttggacacttgtcgtatcgaacatcgacacaacaccaacacatatgattacactgaa 15410475  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    | || | ||||| | |||| ||||   ||||||||||||||||||||||    
T  15410476 tcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgt 15410524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 35017162 - 35017110
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtg 252  Q
    ||||||||||| |||||| ||| |||||||| ||||||| ||| |||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtcccgatgttggacacgtg 35017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 40000555 - 40000611
Alignment:
Q  291 acactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||||||||| |||| ||||   |||||| | |||||||||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgt 40000611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 4e-43; HSPs: 77)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 200 - 345
Target Start/End: Complemental strand, 16766827 - 16766682
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||| |  || |||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 16766728  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||||||||||| |||| ||||  |||||||||||||||||||||    
T  16766727 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 16766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 8365447 - 8365595
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| || ||| ||| |||||||| |||||| ||||||||||||||||||||| || ||||||| |||||||||||||||| |||||| |||    
T  8365447 cctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaa 8365546  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||| |||| |||| |||| ||||||||||||||||||||||||    
T  8365547 ttatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgt 8365595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 200 - 345
Target Start/End: Original strand, 10770607 - 10770748
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgt--cgtgtctgacaccgacatgacaccgacacttgtagttacactga 297  Q
    ||||||||||| |||||| |||||||||||||||||||||  ||||||||||||  ||||||||||||      |||||||||||||||| |||||||||    
T  10770607 ctatgaagcacggacactcctcagattaggcatgtcccggcatcggacacgtgtgtcgtgtctgacac------gacaccgacacttgtaattacactga 10770700  T
Q  298 attatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||||||||||||| |||| |||| |||||| |||||||||||||||    
T  10770701 attatgtgattttttcaaattattagttgtgttggcgtgtcagtgtcc 10770748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 9107299 - 9107446
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| | |||| ||| |||||||  ||||||||||||||||||  || ||||| |||||||||| |||||||||||||||| |||||||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 9107398  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    | ||||||||||| |||| ||||  ||||||||||||| |||||||||    
T  9107399 tttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgt 9107446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 200 - 344
Target Start/End: Original strand, 5970037 - 5970181
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||| || |||| ||| |||| ||| ||||||| ||||||| | |||||||||| |||||||||| |||||| ||| ||||| |||||||||||    
T  5970037 ctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaat 5970136  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||||| |||| ||||  ||||||| |||||| |||||    
T  5970137 tatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtc 5970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 17435329 - 17435182
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||| || ||||||| ||||||||| | |||||| |||||| |||||||||||||| |||| |||||  ||||  ||||||||| |||||||||||    
T  17435329 ctatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaat 17435230  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||| |||||||||||| ||||  | ||||| ||| |||||||||||    
T  17435229 tatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgt 17435182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 199 - 338
Target Start/End: Complemental strand, 18367967 - 18367828
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||  ||| |||| |||||| ||||| |||| ||||||||||||||||||||| ||||||||||| | || |||||||| |    
T  18367967 cctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgca 18367868  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    || ||||||||| ||||| |||||  ||||||||||||||    
T  18367867 ttttgtgattttctaaaaaaattagctgtgtcggcgtgtc 18367828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 202 - 347
Target Start/End: Complemental strand, 12696446 - 12696307
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    |||||||||||||||| ||  ||| |||  |||||||||||| ||||||||||||||| |||||      ||||| |||||||||| |||||||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac------gacactgacacttgtaattacactgaatta 12696353  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||| ||||||| |||| ||||  |||||||||||||||||||||||    
T  12696352 tgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 12696307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 34595253 - 34595117
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||  |||||||||||| ||||||||||||||| ||||||||||           |||||| |||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgaca-----------cttgtaattacactgaat 34595165  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| |||| |||| |||||||||||||||| |||||||    
T  34595164 tatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgt 34595117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 8714110 - 8713998
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||| ||||||| ||| |||| ||| ||||||| ||||||| | |||||||||| |||||||||| |||||| ||| ||||| |||||||||||    
T  8714110 ctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaat 8714011  T
Q  300 tatgtgatttttt 312  Q
    |||||||||||||    
T  8714010 tatgtgatttttt 8713998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 8776907 - 8777049
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||| |||||||  |||| ||||||||||||||||||||||| |   ||||||     || ||||||||| ||||||||||    
T  8776907 cctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc-gtgtccgaca-----ccaacacttgtaattacactgaa 8777000  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    || ||||||||||| |||| |||| ||||||||||||||||||||||||    
T  8777001 ttttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 8777049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 9522998 - 9522899
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||| |||| |||||||||||||||||||  || ||||||||||  ||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  9522998 gattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 31385048 - 31384923
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| |||||| ||  |||||||| ||||||||||| ||||||||||||||||  ||||  ||| ||||| |||||||||| ||||||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacact-acacgacactgacacttgtaattacactgaatt 31384950  T
Q  301 atgtgattttttaaaataattatttgt 327  Q
    |||||||||||| |||| |||| ||||    
T  31384949 atgtgattttttcaaattattagttgt 31384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 199 - 343
Target Start/End: Original strand, 10339053 - 10339198
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagtt-acactga 297  Q
    |||||||||||| |||||| ||| |||||||| |||||| |||||||||| |||||||||| |||||||||| | ||| ||||| | || || |||||||    
T  10339053 cctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactga 10339152  T
Q  298 attatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||||| | |||| | |    ||||||||||||||||||    
T  10339153 attatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgt 10339198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 28152217 - 28152082
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||  ||||| ||| |||||||| ||||||||||||||||||||||||||||            |||||||||||||||| |||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtc-----------cgacaccgacacttgtaattacactgaat 28152129  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||| ||||| |||| ||||  | |||||||||||||||||||||    
T  28152128 tatgtga-tttttcaaattattagctttgtcggcgtgtcagtgtccgt 28152082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 227 - 338
Target Start/End: Original strand, 16488546 - 16488657
Alignment:
Q  227 aggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttg 326  Q
    |||| |||||| ||| | ||||||||||||||| |||||||||| ||||||||||| | || |||||||| ||| ||||||||| ||||| |||||  ||    
T  16488546 aggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctg 16488645  T
Q  327 tgtcggcgtgtc 338  Q
    ||||||||||||    
T  16488646 tgtcggcgtgtc 16488657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 199 - 344
Target Start/End: Complemental strand, 16833428 - 16833294
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||| ||||||||| ||| |||| ||  ||||| |||||||||| |||||||||||           | ||||||||||||||| ||||||||||    
T  16833428 cctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtc-----------taacaccgacacttgtaattacactgaa 16833340  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
     ||||||||||||| |||| |||| |||||||||||||||||||||    
T  16833339 gtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 16833294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 23130405 - 23130483
Alignment:
Q  204 gaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacac 282  Q
    |||||||| ||||| |||||||||||||||||||| | || |||||||||||||||||||||| ||||||||| |||||    
T  23130405 gaagcacatacactcctcagattaggcatgtcccgatatcagacacgtgtcgtgtctgacaccaacatgacactgacac 23130483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 3209518 - 3209367
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccg------acacttgtagttaca 293  Q
    |||||||||||| ||||| ||| |||||||| ||||| |||||||||| ||||||||||  ||||| |||| |||||||      ||||||||| | |||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacacgacaccgacaccgacacttgtaataaca 3209419  T
Q  294 ctgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    || |||||||||| |||||| |||| ||||  |||||||||||||| |||||    
T  3209418 ctaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgtc 3209367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 201 - 347
Target Start/End: Original strand, 17841530 - 17841665
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| |||||| ||| |||||||| |||| | ||||||||||| ||||||||| ||||||| ||           |||||| ||||||| ||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtca-----------cttgtaattacactaaatt 17841618  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||| |||| ||||  |||||||||||||||||||||||    
T  17841619 atgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 17841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 426515 - 426590
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| ||||| | |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  426515 gacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgt 426590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 7801157 - 7801228
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    |||||||||||||||| |||| ||||||||||||||||||| |||| |||| |||||||||||||| |||||    
T  7801157 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 199 - 344
Target Start/End: Original strand, 17327589 - 17327728
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||| |||||||| |||||| ||||| ||||||||||||||      |||||| ||||| ||||| | |||||||||| ||    
T  17327589 cctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgt------ccgacacgacactgacacatatagttacactaaa 17327682  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||| | |||   ||| |||||||||||| ||| ||||    
T  17327683 ttatgtgattttctcaaaatcttagttgtgtcggcgtatcactgtc 17327728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 25038000 - 25038110
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||| ||||||||||| | | || ||| | |||||||||||||||||||||| |||||| |||  | ||||||| ||||| ||||||| |||    
T  25038000 ctatgaagcacatacacttctcaggtcatgcgtgttctggtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaat 25038099  T
Q  300 tatgtgatttt 310  Q
    ||||| |||||    
T  25038100 tatgtaatttt 25038110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 272 - 341
Target Start/End: Original strand, 7977831 - 7977900
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 341  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||| ||||  |||||||||||||||||    
T  7977831 gacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 223 - 343
Target Start/End: Complemental strand, 17302664 - 17302543
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataatt 321  Q
    |||||||  ||| ||| |||||||||||||| |||||| | || |||| ||||  |||||||||| ||||| |||||||||||||| |||| |||| |||    
T  17302664 gattaggtgtgttccgatgtcggacacgtgttgtgtctaatactgacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattatt 17302565  T
Q  322 atttgtgtcggcgtgtcagtgt 343  Q
    | ||||||| ||||||||||||    
T  17302564 agttgtgtcagcgtgtcagtgt 17302543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 853860 - 853928
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag 340  Q
    |||||||||||||||| || |||| |||||||||||||||| |||| |||| |||||||||||||||||    
T  853860 gacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcag 853928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 267 - 347
Target Start/End: Complemental strand, 7930368 - 7930288
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||| |||||||||||||| | || |||| |||||||||||||||| |||| |||| |||||||||| |||||||||||||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 28715415 - 28715344
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  28715415 cctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgaca 28715344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 1681811 - 1681745
Alignment:
Q  277 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||| ||||||||||||| |||||||||| |||| |||| |||||||||||||| |||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgt 1681745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 7378098 - 7378028
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||| ||||||||||||||||| | |||||||||||||||  | ||||||||| ||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgaca 7378028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 24645600 - 24645530
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||||||||||  || |||||| | ||||  |||||||||||||||||||||||||||||||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgaca 24645530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 343
Target Start/End: Complemental strand, 26562806 - 26562676
Alignment:
Q  213 acacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||||||| |||||| |  | ||||||| ||| |||||  |||||||||| |||| |||||| | || |||||||||||||||||||||| |    
T  26562806 acacttctcagattagccatgtctctatatcggacatgtgccgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtgattttct 26562707  T
Q  313 aaaataattatttgtgtcggcgtgtcagtgt 343  Q
     ||||  |||   ||||||||||||| ||||    
T  26562706 caaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 309
Target Start/End: Complemental strand, 7248488 - 7248379
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||| | | |||||||||||||||||| ||| |||||  ||||||||| ||| || |||| | || |||| ||||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 7248389  T
Q  300 tatgtgattt 309  Q
    ||||||||||    
T  7248388 tatgtgattt 7248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 7938174 - 7938101
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||||||||||| || ||||||| |||||| ||||||||| |||| ||||  |||||||||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 7938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 10294238 - 10294129
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||||||||||||| ||||||||||   |||||  || |||||||| ||||||||| |||||| ||| ||||||||||| | || ||||| ||||    
T  10294238 cctatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaa 10294139  T
Q  299 ttatgtgatt 308  Q
     |||| ||||    
T  10294138 atatgcgatt 10294129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 5626697 - 5626769
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||| | || |||||||||| || |||||||| ||||| ||||| |||||||||||||||||||||    
T  5626697 gacaccgacacatatatttacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtc 5626769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 213 - 347
Target Start/End: Complemental strand, 3398729 - 3398602
Alignment:
Q  213 acacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    ||||| ||| |||||| | ||| ||||||||||||| ||||||||||  ||||      |||||||| |||| || |||||||||||||| ||||||||     
T  3398729 acactcctctgattagacgtgttccggtgtcggacatgtgtcgtgtccaacac------gacaccgatacttataattacactgaattatatgatttttc 3398636  T
Q  313 aaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||| || |||  |||||||||||||||||||||||    
T  3398635 aaatta-ttagctgtgtcggcgtgtcagtgtccgt 3398602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 15489733 - 15489808
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| ||||| |||||| ||| ||||||| |||| |||| |||||||| ||||| |||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgt 15489808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 276 - 343
Target Start/End: Complemental strand, 31959213 - 31959146
Alignment:
Q  276 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    |||||||||||| |||||||| ||||||||||||||| |||| ||||  |||| ||||||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgt 31959146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 403865 - 403915
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| ||||    
T  403865 gacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 362
Target Start/End: Original strand, 7265594 - 7265684
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 362  Q
    ||||||||||| | || |||||||||||||||||||||| | |||| ||||   |||| |||||||||||||||| ||  |||||||||||    
T  7265594 gacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgaatacgtgcttcatag 7265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 345
Target Start/End: Complemental strand, 19044527 - 19044449
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    |||||||||||||||| | || | ||||||||||||||||| || | |||| |||| | ||||||||||||||||||||    
T  19044527 gacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtcc 19044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 347
Target Start/End: Original strand, 5000557 - 5000702
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    |||||||||  |||||  || |||||| | ||||| ||||||||| | ||||||||||||||||||||||||||| ||||  |  | ||| ||||||| |    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 5000656  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||| |  ||| ||||   |||||| ||||||||| |||||    
T  5000657 tgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgt 5000702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 4878062 - 4877992
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||||| |||||| ||| |||||||| ||| || |||||||||| |||||||||| ||||||||||    
T  4878062 cctatgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgaca 4877992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 9025448 - 9025495
Alignment:
Q  203 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 250  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 200 - 342
Target Start/End: Complemental strand, 32313535 - 32313392
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||||| |||| ||||| | ||| |  ||||||||||| |||||   ||| |||||||||||||||| |||||| |||| | || || || ||||    
T  32313535 ctatgaagcacggacatttctcgggttaagtgtgtcccggtgttggacatacgtcagtgtctgacaccgacacgacacccacacatataattgcattgaa 32313436  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 342  Q
    | |||| ||||| | || | |||||| |||||||||||||||||    
T  32313435 tcatgttattttctcaacttattattggtgtcggcgtgtcagtg 32313392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 32839571 - 32839654
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccgg-tgtcggacacgtgtcgtgtctgacaccgacatgacaccgacac 282  Q
    |||||||||||||||||||||| |||||||| |||||||| |||  ||||| |||| |||| |||||  |||||||||| ||||    
T  32839571 ctatgaagcacagacacttctcggattaggcgtgtcccggttgttagacacatgtcttgtccgacactaacatgacaccaacac 32839654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 32978842 - 32978909
Alignment:
Q  203 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||| |||||| ||  |||||| | ||||||||||||||||| |||||||||| ||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 32978909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 34073278 - 34073423
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| |||  |||||   |||||||||||||| ||| ||||||||  |||||||||| ||||||||| | | || |||||||||||    
T  34073278 ctatgaagcacggacactcctcgaattagaggtgtcccggtgtcgg-cacatgtcgtgta-gacaccgacacgacaccgacccatataattacactgaat 34073375  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||| |||||| | |||| ||||    ||| ||| |||||||||||||    
T  34073376 tatgagattttctcaaattattagcgatgttggcatgtcagtgtccgt 34073423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 9658920 - 9658862
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||||||||| | |||| ||||   ||||||||||||||||||||||    
T  9658920 ttacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgt 9658862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 9911524 - 9911566
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattt 309  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 362
Target Start/End: Original strand, 27904036 - 27904129
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtg--attttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 362  Q
    ||||||||||| ||||| |||||||||||||||||   |||||| |||| ||||  | ||||||||||||| |||||||||  |||||| ||||    
T  27904036 tgacaccgacatttgtaattacactgaattatgtgttttttttttaaattattagctatgtcggcgtgtcaatgtccgtatccgtgctttatag 27904129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 6665331 - 6665282
Alignment:
Q  201 tatgaagcaca-gacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||||    
T  6665331 tatgaagcacaagacacttctcggattaggcatgtccccgtgtcggacac 6665282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 6898282 - 6898355
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    |||||||||||||||| ||||||| |||||||| |||| || |||| ||||   ||||| ||||||||||||||    
T  6898282 gacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtcc 6898355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 17341671 - 17341740
Alignment:
Q  278 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||| || |||||||||||||||||||||| | |||| ||||   ||||||||||||||||| ||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgt 17341740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 363
Target Start/End: Original strand, 32978900 - 32978986
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtg-attttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatagg 363  Q
    |||||||||||||||| ||||||| |||||||||  |||||| |||| ||||  |||||||||      ||||||||||||||||||||||||    
T  32978900 gacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtcggc------gtgtccgtatttgtgcttcatagg 32978986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 267 - 347
Target Start/End: Complemental strand, 9027241 - 9027161
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||| ||||||||||| | || |||||| ||||||||||||| | | |||| ||||   ||||||||||||||||||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgt 9027161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 339
Target Start/End: Complemental strand, 9629513 - 9629374
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat-gacaccgacacttgtagttacactgaa 298  Q
    ||||||||||  |||||| ||| |||||| | |||| | ||||||||||| ||| ||||| ||||| ||||  ||||||||||| | || ||||| ||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac-gacaccgacaccgacacatataattacattgaa 9629415  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtca 339  Q
    |||||||||||| | |||| |||    ||||||||||||||    
T  9629414 ttatgtgattttctcaaattattggcggtgtcggcgtgtca 9629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 23771636 - 23771562
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||| ||||| |||||||||| ||| | |||||||||| || |||  |||||||||||||| ||||||||    
T  23771636 gacaccgacatttgtaattacactgaagtatataattttttaaatta-ttaactgtgtcggcgtgtccgtgtccgt 23771562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 342
Target Start/End: Original strand, 24115871 - 24115918
Alignment:
Q  295 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 342  Q
    |||||||||||||||||| |||| |||| ||||||| |||||||||||    
T  24115871 tgaattatgtgattttttgaaattattagttgtgtcagcgtgtcagtg 24115918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 8389411 - 8389484
Alignment:
Q  203 tgaagcacagacacttctcagattaggcatgtcccggtgtcggaca-cgtgtcgtgtctgacaccgacatgacac 276  Q
    |||||||| |||||| ||| |||||||  ||||||||||||||||| ||||| | ||| ||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgacatgacac 8389484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 9195727 - 9195793
Alignment:
Q  244 ggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 310  Q
    |||||| ||||||||| |||||| ||| ||||||||||| | || ||||||| |||||||| |||||    
T  9195727 ggacacatgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcatttt 9195793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 9658974 - 9658928
Alignment:
Q  224 attaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||| ||| |||||||| |||||||||||||||| |||||||||    
T  9658974 attaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgaca 9658928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 21395292 - 21395381
Alignment:
Q  255 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||| ||||| |||| |||||||||||||||| ||||||| |||||||| ||||| | |||| ||||   |||| |||||||| ||||||    
T  21395292 gtgtccgacactgacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtcc 21395381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 31959268 - 31959214
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg 255  Q
    |||||||||| |||||| ||| |||||||  |||||||||||||||||| |||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcg 31959214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 1191706 - 1191763
Alignment:
Q  277 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcg 334  Q
    ||||||||||| |||||||||||| ||||| ||||| |||| ||||  ||||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcggcg 1191763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 1700410 - 1700365
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaat 317  Q
    ||||||||||||| || |||||||||| ||||||||||||| ||||    
T  1700410 gacaccgacacttataattacactgaaatatgtgatttttttaaat 1700365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 5732511 - 5732584
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||||||||| | || ||||||| || ||||||||||| | |||| ||||   ||||||||||||||||||||    
T  5732511 gacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtcc 5732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 341
Target Start/End: Complemental strand, 19040410 - 19040341
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 341  Q
    ||||| ||||| | || |||||||||||||||||||||| | |||| ||||   ||||||||||||||||    
T  19040410 gacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 26178620 - 26178661
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtc 243  Q
    |||||||||||||||| ||| |||||||| ||||||||||||    
T  26178620 atgaagcacagacactcctccgattaggcgtgtcccggtgtc 26178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 343
Target Start/End: Original strand, 34290063 - 34290149
Alignment:
Q  255 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||| ||||| |||| ||||||||||| |  | |||||||||||||||||||| |   |||| |||| |||||||||| |||||||||    
T  34290063 gtgtcggacactgacacgacaccgacacat--aattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgt 34290149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 4878001 - 4877933
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtca 339  Q
    |||||||||||||||| ||| ||| |||||||||| |||||| |||| ||||  |||||||| ||||||    
T  4878001 gacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtca 4877933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 7027300 - 7027260
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    ||||||||||| | || ||||||||||||||||||||||||    
T  7027300 gacaccgacacatataattacactgaattatgtgatttttt 7027260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 26402681 - 26402721
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  26402681 gacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 31429004 - 31429044
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||| ||| ||||| ||||||||||||||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgatttttt 31429044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 33818087 - 33818023
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgaca 264  Q
    ||||||| |||||||||| ||||||||||||||||| | ||||  |||||| | |||||| ||||    
T  33818087 ctatgaatcacagacactcctcagattaggcatgtctcagtgttagacacgcgacgtgtccgaca 33818023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 88; Significance: 6e-42; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 241724 - 241577
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||| ||||||||||||  || ||||||| |||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaat 241625  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||  |||| ||||  |||||||||||||||||||||||    
T  241624 tatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgt 241577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 236913 - 236964
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 250  Q
    ||||||||||||||||||| |||||||||||  |||||||||||| ||||||    
T  236913 cctatgaagcacagacactcctcagattaggtgtgtcccggtgtcagacacg 236964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 9e-41; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 199 - 344
Target Start/End: Original strand, 41961578 - 41961723
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||||| || ||||||| |||||||||||||||| |||||| |||    
T  41961578 cctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaa 41961677  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    | ||||||| |||| |||| |||| ||||| |||||||||||||||    
T  41961678 taatgtgatattttcaaattattagttgtgacggcgtgtcagtgtc 41961723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 199 - 338
Target Start/End: Complemental strand, 14209244 - 14209105
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||||||  |||||||  | ||||| ||||| |||||||||||||| |||||||||| ||||| |||||||||| ||||||||||    
T  14209244 cctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaa 14209145  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  14209144 ttatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 200 - 365
Target Start/End: Complemental strand, 27505370 - 27505211
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||      |||||||||||||||| ||||||| |||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac------gacaccgacacttgtaattacacttaat 27505277  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggtt 365  Q
    |||||||||||| ||||| ||||  ||||||||| |||| || |||||||  ||||||||||||||    
T  27505276 tatgtgatttttaaaaattattagctgtgtcggcttgtccgtatccgtatccgtgcttcataggtt 27505211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 202 - 343
Target Start/End: Original strand, 4987222 - 4987363
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    |||||| || |||||| ||| |||||||| ||||||||||||||||||||||||||||  ||||||||| | |||| ||||||||| |||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatta 4987321  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||| |||| ||||  |||||||||||||||||||    
T  4987322 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 201 - 347
Target Start/End: Complemental strand, 14217021 - 14216875
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| |||||||||| |||||||  |||||| |||||| |||||||||||||| |||||  ||| ||||| |||||||||| ||||||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14216922  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    || |||| ||||||||| |||| |||||||| |||||||||||||||    
T  14216921 atatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgt 14216875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 201 - 347
Target Start/End: Complemental strand, 14223150 - 14223004
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| |||||||||| |||||||  |||||| |||||| |||||||||||||| |||||  ||| ||||| |||||||||| ||||||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14223051  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    || |||| ||||||||| |||| |||||||| |||||||||||||||    
T  14223050 atatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgt 14223004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 199 - 347
Target Start/End: Complemental strand, 28812646 - 28812499
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||| ||||||||||| ||| |||||||| ||||| | ||||||||| || |||||||||||||| ||| ||||||||||||||||  |||||||||    
T  28812646 cctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaa 28812547  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||| || |||| |||| ||||||||||||||| ||||||||    
T  28812546 ttatgtgatttcttcaaattattagttgtgtcggcgtgtc-gtgtccgt 28812499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 200 - 344
Target Start/End: Original strand, 34185052 - 34185196
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||||||| |||| |||| ||||  |||| |||||||||||||||| |||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaat 34185151  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    | ||||||||||| |||| ||||   |||||||||||||| ||||    
T  34185152 tgtgtgattttttgaaattattagccgtgtcggcgtgtcactgtc 34185196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 223 - 347
Target Start/End: Original strand, 15796246 - 15796370
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||| ||| ||||||| |||||||||| ||||| |||||| ||| |||||||||| ||||| |||||||||||||| ||||||||| |||| ||||    
T  15796246 gattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattatta 15796345  T
Q  323 tttgtgtcggcgtgtcagtgtccgt 347  Q
      ||||||||||||||| |||||||    
T  15796346 actgtgtcggcgtgtcattgtccgt 15796370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 224 - 347
Target Start/End: Complemental strand, 14832205 - 14832082
Alignment:
Q  224 attaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattat 323  Q
    ||||||| |||||||||||||||||||||||||||| || ||||||| ||||| |||||||||| ||||| ||| |||||||||||||| |||| ||||     
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattag 14832106  T
Q  324 ttgtgtcggcgtgtcagtgtccgt 347  Q
     ||| |||||||||| || |||||    
T  14832105 ctgtatcggcgtgtccgtatccgt 14832082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 201 - 344
Target Start/End: Original strand, 15999951 - 16000089
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    ||||| |||| |||||| ||  |||||||| |||||||||||||||||||||||||||  |   ||||||     |||||||||||||||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgaca-----ccgacacttgtagttacactgaatt 16000045  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||| ||||||| |||| |||| |||||||||||||||||||||    
T  16000046 atgttatttttttaaattattagttgtgtcggcgtgtcagtgtc 16000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 55401194 - 55401058
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| |||| ||||||||||||||||||||||| ||||||||||           |||||| ||||||| |||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca-----------cttgtaattacactaaat 55401106  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| |||| |||| |||||||||||| |||||||||||    
T  55401105 tatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgt 55401058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 49651715 - 49651837
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||||||| |||||||  ||||||||||||||| | |||||||||| |   |||||| |||||||||||||||| ||||| ||||    
T  49651715 cctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccggt-ccgacacgacaccgacacttgtaattacagtgaa 49651813  T
Q  299 ttatgtgattttttaaaataatta 322  Q
    |||||||||||||| |||| ||||    
T  49651814 ttatgtgattttttcaaattatta 49651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 204 - 344
Target Start/End: Complemental strand, 14829816 - 14829676
Alignment:
Q  204 gaagcacagacacttctcagattaggcatgtcccggtgtcggac-acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 302  Q
    ||||||| |||| | |||||||||||| ||||||||||||| || || | |||||||  ||||||||| |||||||||||||||| ||||  ||||||||    
T  14829816 gaagcacggacattcctcagattaggcgtgtcccggtgtcgaaccacatctcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattat 14829717  T
Q  303 gtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||| |||| |||| ||||  ||||||||||||||||||||    
T  14829716 gtgat-ttttcaaattattagctgtgtcggcgtgtcagtgtc 14829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 55213093 - 55212960
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||| ||||| || ||||||  ||||| || |||| ||||||||||||||||| ||| | ||||||||||  ||||||||||||||| || |||| ||    
T  55213093 cctatgtagcacggatacttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaa 55212995  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggc 333  Q
    ||||||||||||||||||| ||||  |||||||||    
T  55212994 ttatgtgattttttaaaattattaactgtgtcggc 55212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 20503584 - 20503451
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||| |||| ||||||||||         ||  ||||||||||||||| |||||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtc---------ca--acaccgacacttgtaattacactgaat 20503496  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||| ||||||| |||| |||  |||||||||||||||||||||    
T  20503495 tatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 347
Target Start/End: Complemental strand, 28918120 - 28917984
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||||||  |||||| ||  |||||||| |||||| |||||||||||||||||||||         || |||||||||||||||| |||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtc---------cacgacaccgacacttgtaattacactgaatta 28918030  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||| |||| ||||  | ||||||||||||||| |||||    
T  28918029 tgtgattttttcaaattattagctatgtcggcgtgtcagtttccgt 28917984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 2620007 - 2620128
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||| ||||||| || |||||| ||||||||||| |||||| || |||||| |||| |  ||||||||| |||||||||||||| | |||| ||||    
T  2620007 gattaggcgtgtcccgatgccggacatgtgtcgtgtctaacaccgccacgacaccaacacat--agttacacttaattatgtgattttctcaaatgatta 2620104  T
Q  323 tttgtgtcggcgtgtcagtgtccg 346  Q
     | |||||||||||||||||||||    
T  2620105 gtggtgtcggcgtgtcagtgtccg 2620128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 200 - 362
Target Start/End: Complemental strand, 18427068 - 18426917
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||| ||| |||||| |||||||||||  |||||||||| |||||||||||||| || |||||||||||            | || |||||| ||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacata-----------tataattacaccgaat 18426980  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 362  Q
    ||||||||||||| |||| |||| | ||||||||||||| |||||||||| ||||||||||||    
T  18426979 tatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtccgtatctgtgcttcatag 18426917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 34910397 - 34910309
Alignment:
Q  250 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    ||||| |||| |||||||| | ||||||||| |||||| |||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  34910397 gtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 10955010 - 10954939
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    |||||||||||||||  |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  10955010 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 750590 - 750695
Alignment:
Q  243 cggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc-agt 341  Q
    ||||||||||||||||| || ||||||| |||||||||||||||| || ||  |||||||||||| |||| |||| |||| |||||||| |||||| |||    
T  750590 cggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagt 750689  T
Q  342 gtccgt 347  Q
    ||||||    
T  750690 gtccgt 750695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 200 - 345
Target Start/End: Original strand, 17005548 - 17005693
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||| ||||| ||| ||||||   ||||| |||||| |||||||||  ||||||||||| |||  |||||||||||| || |||||||||||    
T  17005548 ctatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaat 17005647  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||| ||||||| | |||| |||| | |||| || | ||||||||||    
T  17005648 tatatgattttatcaaattattagtggtgttggtgagtcagtgtcc 17005693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 200 - 339
Target Start/End: Original strand, 8039764 - 8039903
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||||| |||  || ||||| || ||||||||||||||||| || || |||| |||||||||| ||||||||||| | || |||||||||||    
T  8039764 ctatgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaat 8039863  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtca 339  Q
    ||| | ||||| | |||| ||||   |||| |||||||||    
T  8039864 tatataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 8587022 - 8587097
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| | ||  |||||||||||||||||||||||    
T  8587022 gacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgt 8587097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 200 - 343
Target Start/End: Complemental strand, 9800170 - 9800027
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| || ||  ||| |||||||| ||||| |||||| ||||||| || | ||||| ||||||| |||||||||||||  | |||||| ||||    
T  9800170 ctatgaagcacggaaacgcctccgattaggcgtgtccaggtgtccgacacgtatcatctctgataccgacacgacaccgacacttacaattacacggaat 9800071  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||| ||||| | |||| ||||   ||||||||||||||||||    
T  9800070 tatgtaattttctcaaattattagaggtgtcggcgtgtcagtgt 9800027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 10335287 - 10335362
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| ||||||| || ||||||| ||||| |||| |||| ||||||||||||||||||||||||    
T  10335287 gacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgt 10335362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 271 - 345
Target Start/End: Original strand, 10268486 - 10268560
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    |||||| |||||||||| ||||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  10268486 tgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtcc 10268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 200 - 322
Target Start/End: Complemental strand, 16789141 - 16789020
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| |||| ||||||  ||||||| ||| ||||| ||||| |||| ||||| |||| |||||| |||||| || |||||||||||    
T  16789141 ctatgaagcacggacactcctcaaattaggtgtgtcccg-tgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaat 16789043  T
Q  300 tatgtgattttttaaaataatta 322  Q
    ||| ||||||||| |||| ||||    
T  16789042 tatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 25948881 - 25948978
Alignment:
Q  265 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 362  Q
    |||||| |||||| |||||| || |||||||||||||||||||||||| |||| ||||   || ||||| ||||||||||||| | ||||||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtctgtgcttcatag 25948978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 21479176 - 21479104
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||| ||| |||||||||||| ||||||||||| |||| ||||  ||||||||||||||||||||    
T  21479176 gacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 274 - 341
Target Start/End: Complemental strand, 26508166 - 26508099
Alignment:
Q  274 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 341  Q
    |||||||||||||| |||||||||||||||||||||||| |||| ||||  |||||| ||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagt 26508099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 202 - 345
Target Start/End: Complemental strand, 29508567 - 29508429
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||||||| |||||||||  |||||| | ||||||||||||||||  |||||||||| |||||| ||||     |||||| | || |||||||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacat-----cgacacatataattacactgaatta 29508473  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    | ||||||||| |||| |||| | || |||| |||||| |||||    
T  29508472 tatgattttttcaaattattagtggtatcggtgtgtcaatgtcc 29508429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 40993274 - 40993345
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||||  |||||| ||| |||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  40993274 cctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 40993345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 11252095 - 11252025
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||||||||||| ||| |||||||| ||| ||| || ||||||||||| ||||||||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgaca 11252025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 25775567 - 25775493
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||| ||||  ||||| |||||||||||||||    
T  25775567 gacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 25065005 - 25064895
Alignment:
Q  232 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 331  Q
    |||||||||||| ||||||||||||||| |||||| ||| || ||| |||| |  | ||||||| |||||||||||||||| |||| ||||   ||||||    
T  25065005 tgtcccggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacacat--aattacactaaattatgtgattttttcaaatcattagcggtgtcg 25064908  T
Q  332 gcgtgtcagtgtc 344  Q
    |||||||| ||||    
T  25064907 gcgtgtcaatgtc 25064895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 267 - 344
Target Start/End: Complemental strand, 39756299 - 39756222
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||| |||||||||||||||| ||| | | |||||||||||||||| |||| |||| || ||||||||||||||||||    
T  39756299 gacacgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtc 39756222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 16192667 - 16192727
Alignment:
Q  205 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 265  Q
    ||||||| ||||| |||| |||||| ||||||||||||| |||||||||||||||||||||    
T  16192667 aagcacaaacactcctcatattaggtatgtcccggtgtcagacacgtgtcgtgtctgacac 16192727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 1509614 - 1509547
Alignment:
Q  255 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    ||||| |||||||| | |||||||||||||||| ||||||| |||||||||||||||| |||| ||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 1509547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 26492206 - 26492281
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||| ||||||| |||||||||||| | ||||||||| |||| ||||  | |||||||||||||||||||||    
T  26492206 gacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgt 26492281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 51206354 - 51206404
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  51206354 gacaccgacacttgtatttacactgaattatgtgattttttcaaattatta 51206404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 7171622 - 7171554
Alignment:
Q  198 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 266  Q
    |||||||||||| | ||||| ||  |||||||| |||| ||||||||||||||||||||||| ||||||    
T  7171622 tcctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacacc 7171554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 13806363 - 13806284
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacac 282  Q
    ||||||||| |||||| ||| |||||||| |||||||| ||||| || |||| |||||| ||||||||| |||||||||||    
T  13806363 atgaagcacggacact-ctcggattaggcgtgtcccggggtcggtcatgtgttgtgtctaacaccgacacgacaccgacac 13806284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 8383315 - 8383240
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| || |||||||||||||| ||||||| | |||| ||||   |||||||||||||| |||||||    
T  8383315 gacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgt 8383240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 29112298 - 29112369
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcat 360  Q
    |||||||||||||| ||||||| | ||||||||| | |||||  |||||||||||||||||  |||||||||    
T  29112298 ttacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtccgtatccgtgcttcat 29112369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 11610628 - 11610578
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 250  Q
    ||||||||||| |||||| |||||||||||| ||||||| |||||||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacg 11610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 267 - 344
Target Start/End: Complemental strand, 14747625 - 14747547
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||| ||||| ||| |||||| ||||||| |||||||||||| |||| |||| ||||  ||||||||||||||||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 24205047 - 24205117
Alignment:
Q  277 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||| || |||||||| ||||||| ||||| | |||| |||||  ||||||||||||||||||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgt 24205117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 3164020 - 3164101
Alignment:
Q  266 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||| |||| | ||||||||  |||||||||||||||||||||||| |||| ||||  ||||||| |||| || |||||||    
T  3164020 cgacacgacatcaacacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgt 3164101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 4990950 - 4991043
Alignment:
Q  254 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||| ||| ||| ||| |||||||||||| |||||||||||||||| ||||| | |||  ||||   ||||||| |||||||| |||||    
T  4990950 cgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgt 4991043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 14223788 - 14223864
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacatgacac 276  Q
    |||| ||||||||| ||| |||||||||||| ||||||  ||||||||||||||| ||||| |||||||||| |||||    
T  14223788 ctataaagcacagaaactcctcagattaggcgtgtccc-atgtcggacacgtgtcggtgtcggacaccgacacgacac 14223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 40052367 - 40052318
Alignment:
Q  295 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 3610691 - 3610619
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||| ||||||| ||| ||||||||| |||||| ||||||| |||| ||||  ||||| ||||||||||||||    
T  3610691 gacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtc 3610619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 8593195 - 8593155
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  8593195 gacaccgacacttgtaattatactgaattatgtgatttttt 8593155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 14979222 - 14979166
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    |||||||||||||||||||||||| |||| ||||  |||||||||||| || |||||    
T  14979222 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtcc 14979166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 16192729 - 16192789
Alignment:
Q  250 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 310  Q
    ||||||||||||||||||||| |||| | |||| | || |||||||||||||||| |||||    
T  16192729 gtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttatttt 16192789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 21256990 - 21257058
Alignment:
Q  275 accgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||||| ||| |||||||||||||||||||| |||| ||||  ||||||  |||||| ||||    
T  21256990 accgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcatcgtgtcggtgt 21257058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 22774063 - 22774143
Alignment:
Q  264 accgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||||||||||||| || |||||||||| ||||||| ||| |  ||| |||| | |||||| |||||| |||||    
T  22774063 accgacatgacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgtctgtgtc 22774143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 25211648 - 25211604
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcgg 245  Q
    ||||||||||| |||||||||||||||||| ||||| ||||||||    
T  25211648 tatgaagcacaaacacttctcagattaggcgtgtcctggtgtcgg 25211604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 26290469 - 26290357
Alignment:
Q  232 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 331  Q
    ||||| ||||||||||| ||| ||| || |||||||  | ||||| ||||| | || ||| || ||| ||||||||||| | |||| |||| | ||||||    
T  26290469 tgtcctggtgtcggacatgtgccgtttccgacaccggaacgacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtcg 26290370  T
Q  332 gcgtgtcagtgtc 344  Q
    |||||||||||||    
T  26290369 gcgtgtcagtgtc 26290357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 35222996 - 35222924
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||| | || ||||| |||||||||||||||| |||||   ||| ||||||||||||||| |||||    
T  35222996 gacaccgacacatataattacattgaattatgtgattttctaaaaatgttagttgtgtcggcgtgtctgtgtc 35222924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 35994744 - 35994811
Alignment:
Q  277 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||||||||| |||||||||||||||||| ||||| |||| ||||  ||||||||| ||||| |||||    
T  35994744 cgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtcattgtcc 35994811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 40052432 - 40052380
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgt 251  Q
    ||||||||||||  ||||| ||| |||||||| ||||||||||||||||||||    
T  40052432 cctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 10318036 - 10318110
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| || ||||||| ||  |||||| ||||| |||| ||||  |||||||||||||||||||||||    
T  10318036 gacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgt 10318110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 11610573 - 11610510
Alignment:
Q  278 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 341  Q
    ||||||||||  ||||||||||||||||||||||| |||| ||||   |||| |||||||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagt 11610510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 12084002 - 12083959
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtc 243  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||    
T  12084002 ctatgaagcacagacactcctcagattaggcacgtccaggtgtc 12083959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 14338455 - 14338494
Alignment:
Q  232 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 271  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  14338455 tgtcccggtgtccgatacgtgtcgtgtctgacaccgacat 14338494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 23870579 - 23870650
Alignment:
Q  291 acactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 362  Q
    |||||||||||| ||||||||| |||| ||||   |||||| |||||| ||||||||||  |||||||||||    
T  23870579 acactgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgtatccgtgcttcatag 23870650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 7928508 - 7928458
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    ||||||||||| | || |||||||||||||||||||||||| |||| ||||    
T  7928508 gacaccgacacatataattacactgaattatgtgattttttcaaattatta 7928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 11666050 - 11665964
Alignment:
Q  224 attaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 310  Q
    ||||||| ||| ||| | || |||||||||||||||| ||| | ||| ||||||||||| | || ||||||| |||| |||||||||    
T  11666050 attaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgatttt 11665964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 17276846 - 17276792
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc 254  Q
    ||||||||||| |||||||||| |||||||   ||| ||||||||||||||||||    
T  17276846 ctatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacgtgtc 17276792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 21211413 - 21211335
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacatgacacc 277  Q
    |||||||||||| ||||| ||| |||||||  |||||| |||||||||||| ||| |||||  ||||||||| ||||||    
T  21211413 ctatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcggtgtcgaacaccgacacgacacc 21211335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 21720805 - 21720747
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||||| ||| || | |||| |||||  ||||||||||||||||||||||    
T  21720805 ttacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgt 21720747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 35223057 - 35222987
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||| |||||| ||| ||| | || |||||| ||||| |||||||||| |||| ||||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgaca 35222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 38731276 - 38731226
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    ||||||||||| | ||  |||||||||||||||||||||||||||| ||||    
T  38731276 gacaccgacacatataactacactgaattatgtgattttttaaaattatta 38731226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 27277780 - 27277832
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgt 253  Q
    |||||||||||| ||||| ||| |||||| |||||||| |||||||||||||||    
T  27277780 ctatgaagcacatacactcctcggattagacatgtccc-gtgtcggacacgtgt 27277832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 27903759 - 27903702
Alignment:
Q  198 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg 255  Q
    ||||||||||||| |||||||||| |||||||||||  || ||||| |||||| ||||    
T  27903759 tcctatgaagcacggacacttctcggattaggcatgatccagtgtcagacacgcgtcg 27903702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 1389956 - 1389908
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    |||||||||| |||||| ||  |||||||||||||| ||||||||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacac 1389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 3865732 - 3865692
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||||||| ||| |||||||||||||| |||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtgagttttt 3865692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 5339161 - 5339077
Alignment:
Q  277 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcata 361  Q
    ||||||||||  ||||| | |||||||||||||| | |||| ||||    |||||||||||| || |||||||| ||||||||||    
T  5339161 cgacacttgtttttacattaaattatgtgattttctcaaattattaacaatgtcggcgtgtctgtatccgtattcgtgcttcata 5339077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 10955048 - 10955012
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    |||||||| |||||| |||||||||||||||||||||    
T  10955048 gattaggcgtgtcccagtgtcggacacgtgtcgtgtc 10955012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 25093560 - 25093488
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||| | || |||||||||||| ||||||||| | |||| ||||   |||||||||||| ||||||    
T  25093560 gacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtc 25093488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 33359819 - 33359747
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||| |||||||||| ||||||| || |||||||  |||| |||| ||||  |||||| |||||||||||||    
T  33359819 gacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtgtc 33359747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 4e-37; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 199 - 338
Target Start/End: Original strand, 24613629 - 24613768
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||  |||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  24613629 cctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaa 24613728  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    |||||||||||| | |||| |||| |||||||| ||||||    
T  24613729 ttatgtgattttctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 199 - 344
Target Start/End: Complemental strand, 19482799 - 19482654
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||||||  ||||| ||| |||||||  |||||| |||||||||||||||||||||  | ||||||| |||||| ||||||||| |||||| |||    
T  19482799 cctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaa 19482700  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||| |||| |||| |||| |||||||||||||||||||||    
T  19482699 ttatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtc 19482654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 199 - 364
Target Start/End: Original strand, 22234818 - 22234984
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||||||  ||||||||| ||||||   ||||| |||||||||||||||||||||| |||||||||| ||||||||||| |  | ||||||||||    
T  22234818 cctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaa 22234917  T
Q  299 ttatgtgatttttta-aaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggt 364  Q
    ||||||||||||||  ||||  |||   ||||||||||||| ||||||||||  |||||||||||||    
T  22234918 ttatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccgtatccgtgcttcataggt 22234984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 201 - 310
Target Start/End: Original strand, 30982808 - 30982917
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| ||||||  |  |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  301 atgtgatttt 310  Q
    ||||||||||    
T  30982908 atgtgatttt 30982917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 219 - 345
Target Start/End: Original strand, 27706125 - 27706251
Alignment:
Q  219 ctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaata 318  Q
    |||||||||||| ||||||||| ||||| |||||||||||| ||||   ||| |||||  ||||||||| ||||||| |||||||||||||||| ||||     
T  27706125 ctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgatttttttaaatt 27706224  T
Q  319 attatttgtgtcggcgtgtcagtgtcc 345  Q
    |||| |||||||| |||||||||||||    
T  27706225 attaattgtgtcgacgtgtcagtgtcc 27706251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 23292926 - 23293062
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||            |||||||||||||||| ||| |||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc-----------cgacaccgacacttgtaattatactgaat 23293014  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| |||| ||||  ||||||||||||||| |||||||    
T  23293015 tatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgt 23293062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 202 - 312
Target Start/End: Complemental strand, 19312463 - 19312353
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||| ||| ||||||||||||||||| | |||| |||||||||||||||||||| || |||| ||||| |||||||| |||| || ||||||||||| |    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatca 19312364  T
Q  302 tgtgatttttt 312  Q
    |||||||||||    
T  19312363 tgtgatttttt 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 201 - 344
Target Start/End: Original strand, 3947702 - 3947839
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| |||||| ||| |||||||  ||||| |||||||||||||||||||||| |||||      ||||| |||||||||| ||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac------gacactgacacttgtaattacactgaatt 3947795  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||| |||||||| |||| ||||  ||||||||| |||| |||||    
T  3947796 atgcgattttttcaaattattagctgtgtcggcatgtccgtgtc 3947839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 5414101 - 5414248
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||  ||| |||  |||||| ||||| ||||||||||||||| ||||| |||| |||||||| || | || |||||||| ||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcat 5414200  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    | ||||||||| ||||| |||||  |||||||||||||| ||||||||    
T  5414201 tttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgt 5414248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 200 - 311
Target Start/End: Complemental strand, 47264116 - 47264005
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||||||| ||  || |||||||| ||||| |||||| |||| ||||||| ||||||||| |||||||| ||||| ||||| |||||| ||||    
T  47264116 ctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaat 47264017  T
Q  300 tatgtgattttt 311  Q
    ||||||||||||    
T  47264016 tatgtgattttt 47264005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 4383447 - 4383338
Alignment:
Q  250 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    ||||||||| ||||||||||| ||||| |||| ||||| ||||||||||||||||||| |||| |||| |||| |||| ||| |||||||||||||||||    
T  4383447 gtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcgacgtgtcagtgtccgtat 4383349  T
Q  350 ttgtgcttcat 360  Q
      |||||||||    
T  4383348 ccgtgcttcat 4383338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 200 - 346
Target Start/End: Complemental strand, 36635449 - 36635308
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| ||||||  || |||||||| |||||||||||| ||| |||||||||||||||||     | ||||  |||| | || |||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacac-----tcacacgaacacatataattacactgaat 36635355  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 346  Q
    ||||||||||| | |||| |||| | |||| ||||||||||||||||    
T  36635354 tatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccg 36635308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 24343632 - 24343490
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||||| |||||| |||||| ||||| ||||||||||||||||||| ||| ||||| ||||||||||      |||||| | || ||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgaca------cgacacctataattacactgaa 24343539  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||| ||||| | |||| |||||  ||||||||||||| | ||||||    
T  24343538 ttatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgt 24343490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 11651142 - 11651212
Alignment:
Q  279 acacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||  ||||||| |||||||||||||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtat 11651212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 202 - 322
Target Start/End: Original strand, 28000672 - 28000794
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc-gacatgacaccgacacttgtagttacactgaatt 300  Q
    ||||||||| ||||||  ||||||||||  |||| ||||||| |||||||||||||    ||||  ||||||||||||||||||||| ||||||||||||    
T  28000672 atgaagcacggacactcatcagattaggtgtgtctcggtgtcagacacgtgtcgtgaacaacacttgacatgacaccgacacttgtaattacactgaatt 28000771  T
Q  301 atgtgatt-ttttaaaataatta 322  Q
    || ||||| ||||||||| ||||    
T  28000772 atatgattattttaaaattatta 28000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 35157925 - 35158061
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||||||| ||||| || ||| ||||||| ||||| |||||||||| ||||           ||||||||| || ||||||| |||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagaca-----------ccgacacttataattacactaaat 35158013  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||  |||| |||| ||| ||||||||||||||||||||    
T  35158014 tatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgt 35158061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 715545 - 715648
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| |||||| |||||||||| |||||||||         ||| |||||| ||||||||| |||||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 715635  T
Q  300 tatgtgatttttt 312  Q
    |||||||||||||    
T  715636 tatgtgatttttt 715648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 752871 - 752974
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| |||||| |||||||||| |||||||||         ||| |||||| ||||||||| |||||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 752961  T
Q  300 tatgtgatttttt 312  Q
    |||||||||||||    
T  752962 tatgtgatttttt 752974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 21945561 - 21945489
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||| ||||  ||||||||| ||||||||||    
T  21945561 gacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtc 21945489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 27442721 - 27442661
Alignment:
Q  139 tgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 199  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||    
T  27442721 tgatagaatagaatattagtcataattagttataattattttcctgtaattatgctgtatc 27442661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 30299005 - 30298929
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| |||||||||||||||| | |||||| |||| ||||  |||||||||||||||||||||||    
T  30299005 gacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgt 30298929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 30327873 - 30327797
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| |||||||||||||||| | |||||| |||| ||||  |||||||||||||||||||||||    
T  30327873 gacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgt 30327797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 40481723 - 40481623
Alignment:
Q  237 cggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtg 336  Q
    |||||||||||||||||||||||  |||||||||| ||||      ||||| ||||||||||||||||||| |||| |||| |||| |||| ||||||||    
T  40481723 cggtgtcggacacgtgtcgtgtccaacaccgacataacac------ttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtg 40481631  T
Q  337 tcagtgtc 344  Q
    ||||||||    
T  40481630 tcagtgtc 40481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 201 - 344
Target Start/End: Complemental strand, 848080 - 847937
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||| ||| |||||| ||  |||||||  |||||||||||  ||||||| ||||||| |||||| ||| |||||||||||||||| ||| | ||||||    
T  848080 tatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaatt 847981  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||| ||||| | |||| ||||   |  ||||||||||||||||    
T  847980 atgtaattttctcaaattattagcggcatcggcgtgtcagtgtc 847937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 8423658 - 8423729
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 271  Q
    |||||| |||| |||||||||| |||||||| |||||||||||||||||  ||||||||| |||||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacat 8423729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 12797339 - 12797413
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||| |||| || || ||||||||||||||||||    
T  12797339 gacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccgt 12797413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 272 - 339
Target Start/End: Original strand, 12895275 - 12895342
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 339  Q
    ||||||||||||| || ||||||  |||||||||||||||| |||| |||||||||||||||||||||    
T  12895275 gacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtca 12895342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 203 - 340
Target Start/End: Complemental strand, 28084640 - 28084511
Alignment:
Q  203 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 302  Q
    |||||||| |||||| ||| |||||||| |||||| ||||||||||||||||         ||||||| ||||| |||||||||| ||||| ||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc---------accgacacgacacagacacttgtaattacattgaattat 28084550  T
Q  303 gtgatt-ttttaaaataattatttgtgtcggcgtgtcag 340  Q
    |||||| |||| ||||  |||  ||||||||||||||||    
T  28084549 gtgatttttttcaaattcttagctgtgtcggcgtgtcag 28084511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 34306744 - 34306814
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||||  ||| | |||||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 34306814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 227 - 364
Target Start/End: Complemental strand, 37496807 - 37496665
Alignment:
Q  227 aggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttg 326  Q
    |||| |||||||||||| |||| |||||||||| | || |||||  ||||||||||||||  ||||| |||||||||| ||||| | ||| ||||||  |    
T  37496807 aggcgtgtcccggtgtccgacatgtgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaattatgtcattttctcaaaaaattatcgg 37496708  T
Q  327 tgtcggcgtgtcag-----tgtccgtatttgtgcttcataggt 364  Q
    ||||  ||||||||     ||||||| ||||||||||||||||    
T  37496707 tgtcaacgtgtcagtgtcgtgtccgtgtttgtgcttcataggt 37496665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 16303267 - 16303344
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    |||||||||||||||| ||||||| |||||| | ||||||| |||  ||||| | |||||||||||||||||||||||    
T  16303267 gacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtat 16303344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 14465006 - 14465070
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 265  Q
    |||||||||| |||||| |||||||||| | |||||| |||||| ||||||||||||||||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 49431084 - 49431009
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtccg 346  Q
    ||||||||||||| || |||||||||||||||||||| |||| |||| ||||  ||||||||||||||| ||||||    
T  49431084 gacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccg 49431009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 54580024 - 54580087
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgt 335  Q
    ||||||||||||| || |||||||||||||||||||||||| |||| |||| ||||||| ||||    
T  54580024 gacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 273 - 347
Target Start/End: Original strand, 6485613 - 6485687
Alignment:
Q  273 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||| |||| || |||| ||||||  ||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaattttgtctgcgtgtaggtgtccgt 6485687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 344
Target Start/End: Complemental strand, 12708210 - 12708132
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgatttttt-aaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||| |||| ||||||||||| |||||||||||||| | ||||||| ||||| |||| ||||||| |||||||||||||    
T  12708210 gacacgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtgtc 12708132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 12895110 - 12895191
Alignment:
Q  265 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||| |||||||||||||||| ||||  |||||||||||||||||| |||| ||||  ||| |||||||||| ||||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgt 12895191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 347
Target Start/End: Complemental strand, 30838335 - 30838193
Alignment:
Q  205 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 304  Q
    |||||| |||||| ||| | |||||| ||||  |||||||||||||||||| ||| ||||| |||| |||||||| |||| || ||||||| |||||| |    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattatat 30838236  T
Q  305 gattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
     ||||| | |||| ||||   || ||| ||| |||||||||||    
T  30838235 aattttatcaaattattagcagtatcgacgtatcagtgtccgt 30838193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 362
Target Start/End: Original strand, 46083920 - 46084081
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||  |||||| |||  || |||| |||||| | ||| ||||||||||||||| || || |||| ||||||||||| | || |||||||  ||    
T  46083920 ctatgaagcatggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagat 46084019  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 362  Q
    ||||||||||  ||||| |||||  |||||| | ||||| ||||||||||   ||||||||||    
T  46084020 tatgtgatttactaaaacaattagctgtgtccg-gtgtccgtgtccgtatccatgcttcatag 46084081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 267 - 344
Target Start/End: Original strand, 11596348 - 11596425
Alignment:
Q  267 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||| |||| ||||  | ||| ||||| ||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtc 11596425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 16073452 - 16073380
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    |||||||||||||||| ||||||||||||||| || ||||| |||| |||| |||||| |||||||||| ||||    
T  16073452 gacaccgacacttgtaattacactgaattatgcga-tttttcaaattattacttgtgttggcgtgtcagagtcc 16073380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 29205501 - 29205452
Alignment:
Q  273 acaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 7012197 - 7012049
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg-tgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||||| |||||| |||  ||||||  |  |||||||||||| ||| |||| |||| ||||||||||  ||||||| || | |  | ||||||||    
T  7012197 ctatgaagcacggacactcctcgcattaggtgttccccggtgtcggatacgcgtcggtgtccgacaccgacacaacaccgatacctatgatcacactgaa 7012098  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||| ||||| | |||| |||||  ||||||||||||| ||||||||    
T  7012097 ttatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgt 7012049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 35161156 - 35161096
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    |||||||||||| ||||||| || |||||||  ||| ||||||||||||||||||||||||    
T  35161156 cctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtc 35161096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 42640587 - 42640547
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  42640587 gacaccgacacttgtaattacactgaattatgtgatttttt 42640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 347
Target Start/End: Complemental strand, 904020 - 903905
Alignment:
Q  232 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 331  Q
    |||||| ||||||||||| |||||||||  ||||||| | || || || || | || |||||||||||||||||||||| | |||| ||||   ||| ||    
T  904020 tgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattattaacggtgccg 903921  T
Q  332 gcgtgtcagtgtccgt 347  Q
    | ||||||||||||||    
T  903920 gtgtgtcagtgtccgt 903905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 15029890 - 15029751
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |  ||| ||| |||||||||||||  ||||||||    ||||| |||||||| |||||  |||||| |||| | || |||||||||||    
T  15029890 ctatgaagcacgggtactcctcggattaggcatgtcttggtgtcgg----gtgtcatgtctgacgccgacc-gacaccaacacatataattacactgaat 15029796  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||| |||| |||| ||||   ||||| |||||||||||||    
T  15029795 tatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 21345473 - 21345544
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 271  Q
    |||||||||||| | ||| ||| |||||||||||| ||||||| ||| | || |||||||||||||||||||    
T  21345473 ctatgaagcacacatactcctcggattaggcatgtaccggtgttggatatgtatcgtgtctgacaccgacat 21345544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 274 - 344
Target Start/End: Complemental strand, 24544038 - 24543967
Alignment:
Q  274 caccgacacttgtagttacactgaattatgtg-attttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||| ||||| || |||| ||| ||||||| |||| |||| |||||||||||||||||||||    
T  24544038 caccgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtgtcagtgtc 24543967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 2361915 - 2361985
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||| ||||||  ||||||||||  |||| ||||||| |||||| |||||||| ||||||||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgaca 2361985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 18513174 - 18513224
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    |||||||||||| |||||| |||||||||||| ||||| ||||||||||||    
T  18513174 cctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 28964249 - 28964299
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||| ||||    
T  28964249 gacacagacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 350
Target Start/End: Original strand, 34306805 - 34306882
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatt 350  Q
    |||||||||||||||| |||||||  ||||| ||| ||||| |||| |||| |||||||||||| |||||||| |||||    
T  34306805 gacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcggcgtatcagtgtctgtatt 34306882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 51701340 - 51701266
Alignment:
Q  248 acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||||||  |||||||||| |||||  ||||||||| ||||||| |||||||| ||||||| |||| ||||    
T  51701340 acgtgtcgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattatta 51701266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 11596296 - 11596345
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggaca 248  Q
    |||||||||||| |||||| |||||||||||| ||||||| |||||||||    
T  11596296 cctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 11931410 - 11931298
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg-tgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||||| |||||| |   |||||||  ||||| ||||||||||| | |||| |||| || |||||||||||| |||||| | || ||||||| ||    
T  11931410 ctatgaagcacggacactccatggattaggtgtgtcctggtgtcggacatgcgtcggtgtc-gataccgacatgacatcgacacatatatttacactaaa 11931312  T
Q  299 ttatgtgatttttt 312  Q
    ||||||||||||||    
T  11931311 ttatgtgatttttt 11931298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 20743242 - 20743350
Alignment:
Q  236 ccggtgtcggacacgtgtcg-tgtctgacaccgacat-gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggc 333  Q
    |||||||||||||||||||| ||||||||| |||||  |||||  |||| | |  |||||||||||||||| ||||| | |||| |||||  ||||||||    
T  20743242 ccggtgtcggacacgtgtcggtgtctgacatcgacaccgacaca-acacctatgattacactgaattatgtcattttctcaaattattatccgtgtcggc 20743340  T
Q  334 gtgtcagtgt 343  Q
    ||||||||||    
T  20743341 gtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 40742667 - 40742574
Alignment:
Q  254 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||||||| |||| |||||| | || |||||||  ||||| ||||||| | |||| |||| | |||||||||| ||| |||||||    
T  40742667 cgtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgt 40742574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 944600 - 944652
Alignment:
Q  198 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 250  Q
    ||||||||||| |||| ||| |||||||||||  |||||||||||||||||||    
T  944600 tcctatgaagctcagagactcctcagattaggtgtgtcccggtgtcggacacg 944652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 2361976 - 2362048
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||||| || ||||||| |||||||| ||||||| |||| ||||  |||||||| |||||| ||||    
T  2361976 gacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtc 2362048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 4157266 - 4157198
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||||||||| |||  ||||||  | || |||||||||||| |||||||||| ||||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgaca 4157198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 4157553 - 4157485
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||| ||||||| |||  ||||||| | || |||||||||||| |||||||||| ||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgaca 4157485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 15724483 - 15724563
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgac 280  Q
    |||||||||||| | ||| ||| |||||||| |||   |||||| ||||||||| ||||| |||||||||| |||||||||    
T  15724483 ctatgaagcacataaactcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacacgacaccgac 15724563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 53381529 - 53381601
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgaca 270  Q
    |||||||||||| |||||| ||| |||||||  ||||||||||||||| ||| ||| ||||| ||||||||||    
T  53381529 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgaca 53381601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 5922532 - 5922579
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggaca 248  Q
    ||||||||| ||||||| |||||||||||| |||||| ||||||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgtcggaca 5922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 311
Target Start/End: Original strand, 6879466 - 6879505
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttt 311  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  6879466 gacaccgacacttgtaattacacttaattatgtgattttt 6879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 18966628 - 18966569
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    ||||||||||| |||||| || ||||||||| | ||||| |||||||||||||| |||||    
T  18966628 ctatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtc 18966569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 29205587 - 29205528
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    |||||||||||  ||||| ||| |||||||| |||||| |||||||||| ||||||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 29205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 37203371 - 37203324
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggac 247  Q
    ||||||||||| |||||||||| |||||| | ||||||||||||||||    
T  37203371 ctatgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 40179637 - 40179712
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||| | | || |||||||||||||||||||||||| |||  |||| | |||||  |||||||||||||||    
T  40179637 gacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgt 40179712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 3712458 - 3712504
Alignment:
Q  205 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgt 251  Q
    |||||| |||||| |||||||||| | ||||||||||||||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacacgt 3712504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 5225542 - 5225624
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacac 282  Q
    |||||||||||||| ||| |  ||||||||| |||||||| ||| || | || ||||||| |||||| ||| |||||||||||    
T  5225542 ctatgaagcacagatactccatagattaggcgtgtcccggggtccgatatgtatcgtgtccgacaccaacacgacaccgacac 5225624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 7214465 - 7214523
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtg 257  Q
    ||||||||||||| ||| |  || |||||||||| ||||||||||||||| ||||||||    
T  7214465 cctatgaagcacaaacaatcatcggattaggcatttcccggtgtcggacatgtgtcgtg 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 16886726 - 16886660
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 266  Q
    |||| |||||| ||||||||| ||||||| | ||| |||||||||||||| ||| ||||||| ||||    
T  16886726 ctatcaagcacggacacttctgagattagccgtgttccggtgtcggacacatgtagtgtctgtcacc 16886660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 338
Target Start/End: Original strand, 38847013 - 38847079
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    ||||| |||||||||| ||||||||||| || ||||||||| |||| ||||  |||||||| |||||    
T  38847013 gacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcggagtgtc 38847079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 5775353 - 5775418
Alignment:
Q  266 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 331  Q
    ||||||||||||||||| | || ||||||| |||||||||||||| | |||| |||| | ||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg 5775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 16184951 - 16184902
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggaca 248  Q
    ||||||||||||| ||||| ||| |||||||| |||||| ||||||||||    
T  16184951 cctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggaca 16184902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 34594208 - 34594253
Alignment:
Q  204 gaagcacagacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    |||||||| |||||||||| |||||||||||||| ||||| |||||    
T  34594208 gaagcacatacacttctcatattaggcatgtccctgtgtcagacac 34594253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 38148667 - 38148764
Alignment:
Q  213 acacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 310  Q
    ||||||||  || ||||| ||| || ||||| || ||||||||||||  ||||| ||| |||| ||||| ||  | ||||||||||||||||||||||    
T  38148667 acacttcttcgaataggcgtgttccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgatttt 38148764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 344
Target Start/End: Complemental strand, 50280947 - 50280867
Alignment:
Q  266 cgacatgacaccgacacttgtagttacac--tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||| ||||||| |||||||| ||||||  | |||||||||| ||||| |||| ||||  |||||||||||||| |||||    
T  50280947 cgacacgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgtccgtgtc 50280867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 10133809 - 10133757
Alignment:
Q  219 ctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgaca 270  Q
    |||||||||||  ||||| ||||||||||||| ||| ||||||||||||||||    
T  10133809 ctcagattaggtgtgtcctggtgtcggacacgcgtcagtgtctgacaccgaca 10133757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 20521873 - 20521925
Alignment:
Q  295 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| | |||| |||||  || |||||||||||||||||||    
T  20521873 tgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgt 20521925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 30522930 - 30522966
Alignment:
Q  286 tagttacactgaattatgtgattttttaaaataatta 322  Q
    ||||||||||||||||||||||||| | |||||||||    
T  30522930 tagttacactgaattatgtgattttctcaaataatta 30522966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 31800482 - 31800550
Alignment:
Q  275 accgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||||| ||||| | |||||| | |||||||||||| ||||  |||||||| ||||| ||||    
T  31800482 accgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgtgtcggtgt 31800550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 40965389 - 40965341
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    |||||||||| |||||| |||||||||||| ||||  ||||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggacac 40965341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 6e-36; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 200 - 345
Target Start/End: Original strand, 11223793 - 11223937
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| |||| |||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaat 11223891  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||| ||||||| |||  ||||  |||||| ||||||| ||||||    
T  11223892 tatgttattttttcaaaatattagctgtgtcagcgtgtctgtgtcc 11223937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 26769641 - 26769497
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| |||||| ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||   ||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagat 26769542  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
     ||||||| |||| |||| |||| ||||||||||||||| |||||    
T  26769541 aatgtgatattttcaaattattagttgtgtcggcgtgtctgtgtc 26769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 37419874 - 37419727
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||| |||||||| |||||||||||||||||||  ||||||| |||||||||| ||||||| |||||||| ||||||||||    
T  37419874 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaa 37419775  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 346  Q
    || ||||||||||| |||| |||     ||||||||||||||||||||    
T  37419774 ttttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 34784911 - 34785058
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||||||||| |||  || |||| |||||| ||||| |||| |||||||||| || ||||||| ||||||||||| | || ||||||| |||    
T  34784911 ctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaat 34785010  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||| ||||| ||||| ||||||||| ||||||||||||||    
T  34785011 tatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgt 34785058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 30717459 - 30717606
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||  |||||||| | |||| |||||| |||||||||||||| |||| ||||| |||| ||||||||||| |||||||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 30717558  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| |||| ||||  | ||||||  |||||||||||||    
T  30717559 tatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgt 30717606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 202 - 347
Target Start/End: Complemental strand, 15657992 - 15657847
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||||||  |||||| ||| || ||||| |||||||| ||||||||||||||| ||| |||| | ||| |||||||||| ||||| |||||||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaatta 15657893  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||  |||| |||| ||| |||||||||| |||||||||    
T  15657892 tgtgatttttacaaattattagttgagtcggcgtgttagtgtccgt 15657847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 30404790 - 30404926
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||           |||||||| |||||||||||    
T  30404790 ctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccga-----------cacttgtaattacactgaat 30404878  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| |||| ||||   ||||||||||||||||||||||    
T  30404879 tatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgt 30404926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 200 - 363
Target Start/End: Complemental strand, 27084388 - 27084229
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||| ||||||| ||| |||||||| |||| |||||| |||||||||||||||| ||||||||||||| | ||||||||     |||| |||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgacatgaaatcgacactt----atacattgaat 27084293  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatagg 363  Q
    ||| ||||||| | |||| ||||   ||||||| ||||| ||||||||||  ||||||||||||    
T  27084292 tatatgattttctcaaattattagcagtgtcggagtgtccgtgtccgtatccgtgcttcatagg 27084229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 35056998 - 35056896
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| |||||||||||| |||  | ||||||||||||||||||||| |||||||||| ||||||||||| | || |||||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaat 35056899  T
Q  300 tat 302  Q
    |||    
T  35056898 tat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 36756275 - 36756417
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    |||||||||||||||| ||  |||||||| |||  |||||||||||| |||| ||||  |||||  ||| ||||||||||||| || |||||||||||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaatta 36756374  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||| |||| || |||| |||| |||||||| ||||||||||||    
T  36756375 tgttatttcttcaaattattagttgtgtcgacgtgtcagtgtc 36756417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 201 - 349
Target Start/End: Original strand, 27286222 - 27286370
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||||||||||  | |||||||  |||||||||||||||||| |||||||||| |||| ||||||||||  ||||| | || ||||||| ||||    
T  27286222 tatgaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaatt 27286321  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    ||||||| || | |||| ||||    ||||||||| |||||||||||||    
T  27286322 atgtgatcttatcaaattattagcgttgtcggcgtatcagtgtccgtat 27286370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 18422021 - 18421946
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||| |||| ||||||||||||||||||||||||    
T  18422021 gacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgt 18421946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 200 - 345
Target Start/End: Original strand, 18840953 - 18841087
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||  ||||||||||||||||| ||||||||||           ||||||||||||||||| ||||||| |||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtc-----------tgacaccgacacttgtaattacacttaat 18841041  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||| ||||||| |||| |||| ||||||| ||||||||||||||    
T  18841042 tatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtcc 18841087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 15972931 - 15972856
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| |||||||||||| ||| ||||||| |||| |||| ||||||||||||||||||||||||    
T  15972931 gacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgt 15972856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 200 - 354
Target Start/End: Original strand, 12668352 - 12668506
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| || ||| |||  ||||||  ||||||  |||| || ||||||||| ||  | ||||||| ||||||||||||| || |||||||||||    
T  12668352 ctatgaagcacggatactcctcgaattaggtgtgtcccaatgtcagatacgtgtcgtatccaataccgacacgacaccgacacttataattacactgaat 12668451  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtg 354  Q
    ||||| ||||||| |||| |||| || ||||||||||||||| || || ||||||    
T  12668452 tatgtcattttttcaaattattagttatgtcggcgtgtcagtatctgtgtttgtg 12668506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 20242728 - 20242801
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||||||||| | || |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  20242728 gacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtcc 20242801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 202 - 347
Target Start/End: Original strand, 2438661 - 2438793
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||||||| |||||| ||| |||||||| ||||||||||||||||| ||||||||||            |||||||||||||||| |||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtc-----------cgacaccgacacttgtaattacactgaatta 2438749  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||| |||| ||||  |||||| ||  ||||||||||||    
T  2438750 tgtgattttttgaaattattagctgtgtcagc--gtcagtgtccgt 2438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 19536398 - 19536474
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||| |||| |||||||||||||||| |||||||    
T  19536398 gacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgt 19536474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 205 - 347
Target Start/End: Original strand, 23058389 - 23058519
Alignment:
Q  205 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 304  Q
    |||||| |||||||||| |||||||| |||||||||||||||||             ||||||||| |||||||||||||||| |||||||| |||||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcggaca-------------acaccgacacgacaccgacacttgtaattacactggattatgt 23058475  T
Q  305 ga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    || |||||| |||| |||| |||||| ||||||||| |||||||    
T  23058476 gatttttttcaaattattaattgtgtgggcgtgtcactgtccgt 23058519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 37559035 - 37558960
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| ||||| |||||||||||||||||  |||| ||||  |||||||||||||||||||||||    
T  37559035 gacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgt 37558960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 200 - 343
Target Start/End: Original strand, 21782744 - 21782890
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttg----tagttacact 295  Q
    ||||||||||| |||||| | |||||||| | ||||||||||| |||||||||||||| |||||||| |||  ||| ||||||  |    || |||||||    
T  21782744 ctatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtgcctgacaccaacacaaca-cgacaccggcacataattacact 21782842  T
Q  296 gaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||||||| | |||| ||||   ||||||||||||||||||    
T  21782843 gaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 200 - 344
Target Start/End: Original strand, 38117099 - 38117232
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||  ||| |||||||| |||||||||||||||||||||| ||||| |||||| |||           |||||| |||||| |||     
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaaca-----------cttgtaattacaccgaag 38117187  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||||| |||| ||||  ||||||||||||||||||||    
T  38117188 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 4882678 - 4882747
Alignment:
Q  253 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||| | ||||||| |||||||||    
T  4882678 tcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataatta 4882747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 242 - 347
Target Start/End: Original strand, 34337152 - 34337252
Alignment:
Q  242 tcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 341  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||| |||     |||||||||||||||| |||| || |  ||||||||||||||| |    
T  34337152 tcggacacgtgttgtgtccgacaccgacaggacaccgacacttgtaatta-----aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaat 34337246  T
Q  342 gtccgt 347  Q
    ||||||    
T  34337247 gtccgt 34337252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 227 - 344
Target Start/End: Original strand, 36096331 - 36096448
Alignment:
Q  227 aggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttg 326  Q
    |||| |||||| ||||| ||||||||||||||| |||| ||||| ||||||||||  | || |||||||| ||| ||||||||| ||||| | |||  ||    
T  36096331 aggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattttgtgattttctaaaaaatttagctg 36096430  T
Q  327 tgtcggcgtgtcagtgtc 344  Q
    |||||||||||| |||||    
T  36096431 tgtcggcgtgtccgtgtc 36096448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 201 - 310
Target Start/End: Complemental strand, 44860449 - 44860340
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| |||||| |||  ||||||  ||||||| |||||||||| |||||||||  ||||| ||| ||||||||||| | || ||||||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatt 44860350  T
Q  301 atgtgatttt 310  Q
    ||| ||||||    
T  44860349 atgcgatttt 44860340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 6940310 - 6940238
Alignment:
Q  275 accgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||| ||||||| |||||||| | |||||||||| ||||  |||||||||||||||||||||||    
T  6940310 accgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgt 6940238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 41843565 - 41843424
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||||||||| ||| ||| | || |||||| ||||||||||||||||| ||      ||||||  |||||||||| | || ||| || ||||    
T  41843565 ctatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgt------ccgacacaacaccgacacatataattataccgaat 41843472  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||  ||||| | ||| || |||||||||||||||||||||    
T  41843471 tatgtgatttcctaaaaaatttagttttgtcggcgtgtcagtgtccgt 41843424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 20539675 - 20539750
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| ||||||| |||||| ||||||||| |||| ||||  ||||||| |||||||||||||||    
T  20539675 gacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgt 20539750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 24894454 - 24894372
Alignment:
Q  265 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||| || ||| |||||| || || ||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  24894454 ccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgt 24894372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 24975255 - 24975356
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||||||||||   |||||| ||||||||||| ||| ||||||||||| |||| ||||||||| | | || |||||||||||    
T  24975255 ctatgaagcacggacactcctcagattagatttgtcccagtgtcggacacatgt-gtgtctgacacggacacgacaccgacgcatatatttacactgaat 24975353  T
Q  300 tat 302  Q
    |||    
T  24975354 tat 24975356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 32749754 - 32749864
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||| | |||||| || |||| |||| |||||| ||||||||||| ||||  ||| |||| ||||| ||||| ||||||| |  |||||||||||    
T  32749754 ctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaat 32749853  T
Q  300 tatgtgatttt 310  Q
    |||||||||||    
T  32749854 tatgtgatttt 32749864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 347
Target Start/End: Original strand, 14996171 - 14996300
Alignment:
Q  212 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtga-tttt 310  Q
    |||||| ||| |||||||| ||| |||||||| ||||||||| |||||      ||||| |||||||||||||||| ||||||| |||||| ||| ||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtc------cgacaagacaccgacacttgtaattacactaaattatatgattttt 14996263  T
Q  311 ttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    || |||| ||||  ||||||||| |||||||||||||    
T  14996264 ttcaaattattagctgtgtcggcttgtcagtgtccgt 14996300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 341
Target Start/End: Original strand, 18420363 - 18420504
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||||||||||||| |||||||| ||||    ||||| |||| |||| |||| ||||  ||||  |||||||||||| || || || |||||    
T  18420363 ctatgaagcacagacacttctcggattaggcgtgtcataatgtcgaacacttgtcatgtccgacatggacacaacaccgacacttataattgcattgaat 18420462  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagt 341  Q
    ||||||||||| | |||| ||||   |||| |||||||||||    
T  18420463 tatgtgattttctcaaattattagcagtgttggcgtgtcagt 18420504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 21374706 - 21374775
Alignment:
Q  278 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||||  ||||||||||||| |||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgt 21374775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 21624325 - 21624252
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatg-tgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||||| ||||||||||||||| |  ||||||||||| ||||  ||||||||||||||||||||    
T  21624325 gacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtc 21624252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 28524544 - 28524447
Alignment:
Q  212 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattt 309  Q
    ||||||||||||||||||| |||  | ||||| ||||||||| ||||| |||||| |||  ||| |||||| | || |||||||||||||||||||||    
T  28524544 gacacttctcagattaggcgtgtttctgtgtcagacacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 33153488 - 33153415
Alignment:
Q  266 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 339  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||| |||| ||||  ||| |||||||||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgtgtca 33153415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 20473380 - 20473308
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||| ||||||||||| |||||||||||||| ||| ||||| |||| |||| |||||||||| ||||||||||    
T  20473380 gacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtc 20473308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 196 - 344
Target Start/End: Complemental strand, 28678037 - 28677895
Alignment:
Q  196 tatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacact 295  Q
    |||||||||||||| ||||||| ||| | | || | |||||| ||||||||||| |||||||| |||||||     |||||||| || | || |||||||    
T  28678037 tatcctatgaagcatagacactcctccggtcagccgtgtccctgtgtcggacacttgtcgtgtttgacacc-----gacaccga-acatataattacact 28677944  T
Q  296 gaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    ||||||||||||||||| |||| ||||   ||||||||||  |||||||    
T  28677943 gaattatgtgattttttcaaattattagcggtgtcggcgttccagtgtc 28677895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 199 - 347
Target Start/End: Complemental strand, 30335536 - 30335400
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||||||| ||| |||||||||||||||| |||| |||||| ||| ||||  ||||            |||||||||| ||||| ||||||| ||    
T  30335536 cctatgaagcacatacatttctcagattaggcatatcccagtgtcgaacatgtgttatgtc------------gacaccgacatttgtaattacactaaa 30335449  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||| ||||||| |||| |||| |||||||||||||  |||||||||    
T  30335448 ttatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgt 30335400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 12940941 - 12941011
Alignment:
Q  277 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||| ||||| |||||||||||||| ||||||||| |||| |||| |||||||  |||||||||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgt 12941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 12748786 - 12748737
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 249  Q
    |||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  12748786 ctatgaagcacagacactcctcaaattaggcatgtcccggtgtccgacac 12748737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 28596587 - 28596518
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||| |||||| ||| |||||||  |||||  ||||||||||||||||||||| ||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgaca 28596518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 37497241 - 37497169
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgaca 270  Q
    |||||||||||| |||||||||  |||||| |||||||||||| || ||| ||||| ||||||||||||||||    
T  37497241 cctatgaagcacggacacttctgggattagccatgtcccggtgccgaacatgtgtcggtgtctgacaccgaca 37497169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 272 - 331
Target Start/End: Complemental strand, 974805 - 974746
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 331  Q
    |||||||||||||||| ||||||||||| ||||||| |||| |||| |||| ||||||||    
T  974805 gacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 29367381 - 29367448
Alignment:
Q  283 ttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    ||||| |||||||||||||||||| ||||||||||| |||| ||||| ||||||||| ||||| ||||    
T  29367381 ttgtaattacactgaattatgtgatttttttaaaattattaattgtgccggcgtgtccgtgtctgtat 29367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 16069272 - 16069330
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||| ||||||||| |||| ||||   ||||||||||||||||||||||    
T  16069272 ttacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgt 16069330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 24009414 - 24009344
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||| |||||| ||  ||| |||| |||||| ||||| ||||||||||||||| ||||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 24009344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 12224337 - 12224272
Alignment:
Q  205 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||| ||||| ||  |||||||| |||||| ||||||||||||| ||||||| ||||||||||    
T  12224337 aagcacaaacactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgaca 12224272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 15907851 - 15907912
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctg 261  Q
    ||||||||||| ||||||  ||||||| ||| ||||||||||||||| | ||||||||||||    
T  15907851 ctatgaagcacggacactcatcagattgggcgtgtcccggtgtcggatatgtgtcgtgtctg 15907912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 39959414 - 39959475
Alignment:
Q  138 atgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 199  Q
    |||||||||||||||||||||||| | || ||||||||||| | ||| ||||||| ||||||    
T  39959414 atgatagaatagaatatttgtcatgactaattataatgattattctgtaattatgatgtatc 39959475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 42511322 - 42511387
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 265  Q
    ||||||||||| |||||| ||| |||||| | |||||| ||||||||||||||| ||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 5040792 - 5040752
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  5040792 gacaccgacacttgtaattacattgaattatgtgatttttt 5040752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||  |||||| ||| |||||||| |||||||||||| ||||| || |||||| ||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 21091782 - 21091706
Alignment:
Q  271 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||| |||||||||| |||||||||| ||||| ||||| | |||| ||||   ||||||| ||||||||||||||    
T  21091782 tgacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 18889519 - 18889630
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg-tgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||| ||||||| ||  | |||||  ||||| ||||||||||| | |||| |||| |||||  ||| ||||||||||| | |  ||||||||||    
T  18889519 ctatgaagcagagacactacttgggttaggtgtgtccgggtgtcggacatgcgtcggtgtccgacacaaacaagacaccgacacatatgattacactgaa 18889618  T
Q  299 ttatgtgatttt 310  Q
    ||||||||||||    
T  18889619 ttatgtgatttt 18889630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 368
Target Start/End: Complemental strand, 24009337 - 24009259
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggttgta 368  Q
    |||||||| ||| ||||||||| ||||| |||||  ||||||| |||||| ||||||||||  ||||||||||| |||||    
T  24009337 ttacactgcattttgtgattttctaaaaaaattagctgtgtcgccgtgtc-gtgtccgtatccgtgcttcatagattgta 24009259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 310
Target Start/End: Complemental strand, 24067336 - 24067273
Alignment:
Q  247 cacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 310  Q
    ||||||| ||||| ||||||||||||| ||| ||||||||  ||||| |||||||||| |||||    
T  24067336 cacgtgttgtgtccgacaccgacatgaaaccaacacttgtgattacattgaattatgtcatttt 24067273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 38442365 - 38442295
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    ||||||||||||| || ||| | |||||||||||||||||| |||| |||| ||||| | ||||||||||||    
T  38442365 gacaccgacacttataattatattgaattatgtgatttttttaaatcattagttgtg-ccgcgtgtcagtgt 38442295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 18255981 - 18256039
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtc 330  Q
    ||||||||||||| || ||||| | |||||||||||||||| |||| ||||| ||||||    
T  18255981 gacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtc 18256039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 19574019 - 19573958
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtattt 351  Q
    |||||||||||||||| ||||| | |||| |||||  ||||||||||||| ||||||||||||    
T  19574019 ttacactgaattatgttattttcttaaattattatcggtgtcggcgtgtc-gtgtccgtattt 19573958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 21616803 - 21616745
Alignment:
Q  289 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||||||||| | |||| ||||   ||||||||||||| ||||||||    
T  21616803 ttacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgt 21616745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 22084756 - 22084871
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtccc---ggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgt--agttacac 294  Q
    ||||||||||||||||||  || |||||||| ||||||   |||||| ||||||||| ||||| ||||| |||| || |||| ||| | |  | ||||||    
T  22084756 ctatgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacacgataccggcacatataaaattacac 22084855  T
Q  295 tgaattatgtgatttt 310  Q
    |||||||| |||||||    
T  22084856 tgaattatatgatttt 22084871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 309
Target Start/End: Original strand, 29367283 - 29367382
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||| ||| | ||| ||||||||||||| ||||||||||||| |||          ||||||| || ||||||| ||||| ||||||| |||    
T  29367283 ctatgaagcacaaacattcctcggattaggcatgtctcggtgtcggacacatgt----------accgacacgataccgacatttgtaattacactaaat 29367372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 37559096 - 37559042
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc 254  Q
    ||||||||||| |||||| ||| ||||| || ||| |||||||||||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtc 37559042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 4207949 - 4207865
Alignment:
Q  237 cggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||| |||||||||||||| |||||||||| || |||||||  | || ||||||| ||||||| | |||||| |||| ||||    
T  4207949 cggtgtcgaacacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaattatgcgcttttttcaaattatta 4207865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 23718082 - 23718009
Alignment:
Q  274 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||| | || |||||||||||||||||| ||| | |||| ||||   ||||||| ||||||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgt 23718009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 24105754 - 24105681
Alignment:
Q  274 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||| | || |||||||||||||||||| ||| | |||| ||||   ||||||| ||||||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgt 24105681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Complemental strand, 39323316 - 39323247
Alignment:
Q  278 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||| |||||||||||||||| ||||| | |||| ||||   |||||| ||| |||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgt 39323247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 15972993 - 15972933
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    |||||||||||| |||| |  || |||||||  |||||||| |||||||||||||||||||    
T  15972993 cctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtc 15972933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 20922929 - 20923016
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta-tttgtgtcggcgtgtcagtgtccgtatttgtgcttcata 361  Q
    ||||| ||||| | || ||||||| |||||||||||||| ||||| ||| |  ||||||   |||||||||||| ||||||||||||||||    
T  20922929 gacacagacacatataattacactaaattatgtgattttctaaaaaaatgagcttgtgt---cgtgtcagtgtctgtatttgtgcttcata 20923016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 31456560 - 31456616
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgt 256  Q
    ||||||||||| |||| || || ||||||||||||| || ||||| |||||||||||    
T  31456560 ctatgaagcacggacatttttccgattaggcatgtctcgatgtcgaacacgtgtcgt 31456616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 36409612 - 36409673
Alignment:
Q  254 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaat 317  Q
    |||||| |||||| |||||||||||||||   || ||||||| |||||||||||||||| ||||    
T  36409612 cgtgtcagacaccaacatgacaccgacac--ataattacactaaattatgtgattttttcaaat 36409673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 38355855 - 38355935
Alignment:
Q  239 gtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataa 319  Q
    |||| |||||||||| || ||  ||||| | ||||||||||||| | || | |||||||||||||||||||| | ||||||    
T  38355855 gtgttggacacgtgttgtatccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaataa 38355935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 44635556 - 44635520
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatt 308  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  44635556 gacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 44635612 - 44635568
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcg 244  Q
    ||||||||||| |||||| |||||||||||| |||| ||||||||    
T  44635612 ctatgaagcacggacactcctcagattaggcgtgtctcggtgtcg 44635568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 199 - 344
Target Start/End: Complemental strand, 71856 - 71709
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||| |||||| ||| |||||| | |||||||||||||||||||||| ||||| |||||||||| ||||| |||||| ||| ||||||||||    
T  71856 cctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaa 71757  T
Q  299 ttatgtgatt--ttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    || |||||||  |||| |||| ||||  ||||||||||||||||||||    
T  71756 ttgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgtc 71709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 200 - 358
Target Start/End: Original strand, 8564 - 8722
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| |||  ||||||| ||| || ||||||||||||| ||||||| || ||||||| |||||||||| ||||| ||| || ||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaat 8663  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttc 358  Q
    |||||||| |||| |||| |||| |||||||||| ||||||||| |||||| |||||||    
T  8664 tatgtgatattttcaaattattagttgtgtcggcatgtcagtgttcgtattcgtgcttc 8722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 44454 - 44564
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||  ||||||||| || |||||||| | || |||||||||||    
T  44454 ctatgaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaat 44553  T
Q  300 tatgtgatttt 310  Q
    |||||||||||    
T  44554 tatgtgatttt 44564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 199 - 344
Target Start/End: Original strand, 3777 - 3922
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    |||||||||||  |||||| ||| |||||||| |||| || ||||||||| |||||||||| |||||| ||| ||||| |||||||||| ||||||||||    
T  3777 cctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaa 3876  T
Q  299 ttatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||||||||||| |||| ||||   |||||||| | ||||||||    
T  3877 ttatgtgatttttttaaattattaaccgtgtcggcatatcagtgtc 3922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 3058 - 2946
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||| ||||| |||||| ||| |||||||| ||| ||||||||| ||||||||||||||||| ||||||| ||||| || ||||||| ||||||| |||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaat 2959  T
Q  300 tatgtgatttttt 312  Q
    |||||||||||||    
T  2958 tatgtgatttttt 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 201 - 362
Target Start/End: Complemental strand, 92940 - 92775
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgac----atgacaccgacacttgtagttacactg 296  Q
    |||||||||| |||||| ||| |||||||| ||||| |||||| |||| |||||||||| |||||| ||    |  | || |||||||||| ||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacccaccaacacaaaactgacacttgtaattacactg 92841  T
Q  297 aattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 362  Q
    |||||||| ||||| | |||| ||||   ||||||||||||||||||||||||  |||||||||||    
T  92840 aattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgtatccgtgcttcatag 92775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 123686 - 123612
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtga---ttttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
    |||||||||||||||| ||||||||||||||||||   |||||| |||| ||||  ||||| |||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagtgt 123612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 83218 - 83173
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaat 317  Q
    |||||||||| ||||| |||||||||||||||| ||||||| ||||    
T  83218 gacaccgacatttgtaattacactgaattatgtcatttttttaaat 83173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 207 - 310
Target Start/End: Complemental strand, 53303 - 53200
Alignment:
Q  207 gcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtga 306  Q
    |||| |||||||||  |||||  | ||||||||||||||||||||||| |||| |||||||||| | ||||||||||| || ||||||||||||||||||    
T  53303 gcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtga 53204  T
Q  307 tttt 310  Q
    ||||    
T  53203 tttt 53200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 178813 - 178895
Alignment:
Q  266 cgacatgacaccgacacttgtagttacactgaattatg-tgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||    
T  178813 cgacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 178895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 349
Target Start/End: Original strand, 192256 - 192327
Alignment:
Q  278 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 349  Q
    |||||||||| |||||| ||||||||| ||||| | |||| ||||   ||||||||||||||||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtat 192327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 347
Target Start/End: Complemental strand, 13523 - 13383
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||||||| |||||| ||  |||||||  |||||  ||||| ||| ||||||||||| ||||||||||     ||||| |||||| || ||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgaca-----ccgacccttgtaattgcactgaatta 13429  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||| | |||| |||| ||||||||||||||||||||||||    
T  13428 tgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgt 13383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 23642 - 23529
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 298  Q
    ||||||||||||| ||||||||  ||||| || |||||| || |||||||| | ||||||| |||||||| | ||||| ||||||| || ||||||||||    
T  23642 cctatgaagcacaaacacttctgggattatgcgtgtcccagtctcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaa 23543  T
Q  299 ttatgtgatttttt 312  Q
    ||||||||||||||    
T  23542 ttatgtgatttttt 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 23485 - 23406
Alignment:
Q  265 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 344  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||||  | | ||||| ||||||||||||||||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtc 23406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 347
Target Start/End: Original strand, 21804 - 21944
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||||||| |||||| ||  |||||||  |||||  ||||| ||| ||||||||||| ||||||||||     ||||| |||||| || ||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgaca-----ccgacccttgtaattgcactgaatta 21898  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||| | |||| |||| ||||||||||||||||||||||||    
T  21899 tgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgt 21944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 200 - 347
Target Start/End: Complemental strand, 8917 - 8781
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| || ||| |||||||||||| |||| |||||||||||||||||||||||            |||||||||||||||| ||||||| |||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtc-----------cgacaccgacacttgtaattacactaaat 8829  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
     || ||||||||| |||| ||||  |||||||||||||||||||||||    
T  8828 aatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 8781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 347
Target Start/End: Original strand, 263303 - 263448
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||| ||| |||||| ||| |||||||| ||||  ||| ||| ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaatta 263402  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||| |||| | |||| ||||   |||| | | |||||||||||||    
T  263403 tgtggttttctcaaattattagcagtgttgacatgtcagtgtccgt 263448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 263 - 347
Target Start/End: Complemental strand, 20239 - 20155
Alignment:
Q  263 caccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||| ||||| |||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgt 20155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 243 - 347
Target Start/End: Complemental strand, 51890 - 51794
Alignment:
Q  243 cggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 342  Q
    ||||||||| ||||||||||||||||||        ||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||||||    
T  51890 cggacacgtatcgtgtctgacaccgaca--------acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtg 51799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 202 - 343
Target Start/End: Original strand, 9678 - 9819
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 301  Q
    ||||||||| |||||| ||| |||||  | ||||||| |||| |||| ||||||||||||||||| ||| ||||||||||| | || |||||||||||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T
Q  302 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 343  Q
     |||||||| | |||| |||| | | |||||| |||| ||||    
T  9778 agtgattttctcaaattattagtggcgtcggcatgtctgtgt 9819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 201 - 347
Target Start/End: Original strand, 403 - 538
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||| |||||| ||| |||||||  ||||||||||||||||||| |||||||| ||||           |||||||||||| ||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgaca-----------ccgacacttgtaattacactgaatt 491  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
     ||||||||||| |||| ||||   |||||||||| |||||||||||    
T  492 ttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgt 538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 200 - 361
Target Start/End: Complemental strand, 14646 - 14498
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    |||||||||||  ||||| ||  |||||||| |||| ||||||||||||||||||||||| ||||||              ||||||| |||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc--------------acttgtaattacactgaat 14561  T
Q  300 tatgtgattttttaaaataattatttgtgtcggcgtgt-cagtgtccgtatttgtgcttcata 361  Q
    ||||||||||||| |||| |||| |||||||||||||| | ||||||||||  ||||||||||    
T  14560 tatgtgattttttcaaattattagttgtgtcggcgtgtccggtgtccgtatccgtgcttcata 14498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 46740 - 46665
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||||    
T  46740 gacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgt 46665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 4976 - 5046
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||||||||||| ||| ||||||||||||| |  |||||||||||||||||||| ||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgaca 5046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 4821 - 4924
Alignment:
Q  200 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 299  Q
    ||||||||||| |||||| ||| |||||||| |||||| |||||||||| |||||||||         ||| |||||| ||||||||| |||||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 4911  T
Q  300 tatgtgatttttt 312  Q
    |||||||||||||    
T  4912 tatgtgatttttt 4924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 201 - 345
Target Start/End: Original strand, 5926 - 6070
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    ||||| |||| |||||| ||  ||| |||| |||| | ||||| ||||||||||||||  |||||||| | ||||||||||| | || |||||||| |||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcatt 6025  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
     ||||||||| ||||| |||||  ||| |||||||||| ||||||    
T  6026 ttgtgattttctaaaaaaattagatgtatcggcgtgtcggtgtcc 6070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 19662 - 19562
Alignment:
Q  237 cggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtg 336  Q
    |||||||||||||||||||||||  |||||||||| ||||      ||||| ||||||||||||||||||| |||| |||| |||| |||| ||||||||    
T  19662 cggtgtcggacacgtgtcgtgtccaacaccgacataacac------ttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtg 19570  T
Q  337 tcagtgtc 344  Q
    ||||||||    
T  19569 tcagtgtc 19562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 17750 - 17824
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 346  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| |||| ||||||| |||||| | ||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtccg 17824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 4266 - 4205
Alignment:
Q  138 atgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 199  Q
    |||||||||||||||||||||||||||| | |||||| |||| |||| ||||||||||||||    
T  4266 atgatagaatagaatatttgtcataattggctataattatttccctgtaattatgttgtatc 4205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 6321 - 6261
Alignment:
Q  139 tgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 199  Q
    |||||||||||||||||||| |||||| | |||||| |||| |||| ||||||||||||||    
T  6321 tgatagaatagaatatttgtaataattggctataattatttccctgtaattatgttgtatc 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 130538 - 130465
Alignment:
Q  274 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||| |||||||||||||||||||||||| |||  ||||  ||||||||| ||||| |||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgt 130465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 45531 - 45607
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgt-gattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||||||||||||||| ||||||||||||||||   |||||| | ||||||| |||||||| |||||||||||||||    
T  45531 gacaccgacacttgtaattacactgaattatgtatttttttttagataattaattgtgtcgacgtgtcagtgtccgt 45607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 45493 - 45529
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtc 259  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  45493 gattaggcatgtcgcggtgtcagacacgtgtcgtgtc 45529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 70374 - 70327
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  70374 gattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgaca 70327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 347
Target Start/End: Original strand, 225199 - 225344
Alignment:
Q  202 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    ||||||||| |||||| |||  ||||||| ||||| ||||||| ||||| ||| ||||| ||||| ||||  |   |||||||| || ||||| || |||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgacac-gacaccaacacgacacttataattacattgtatt 225297  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    |||| ||||| | |||| ||||| |||||||||||||||||||||||    
T  225298 atgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgt 225344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 199 - 337
Target Start/End: Complemental strand, 24156 - 24018
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcgg--acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactg 296  Q
    |||||||||||| ||||||  || |||||||| ||| || |||||||  |||||||| ||||| |||||||||| ||||| || || |||| |||||||     
T  24156 cctatgaagcacggacactcatcggattaggcgtgt-ccagtgtcggacacacgtgttgtgtccgacaccgacacgacactgaaac-tgtaattacacta 24059  T
Q  297 aattatgtgattttttaaaataattatttgtgtcggcgtgt 337  Q
    ||||||| ||||||| ||||| ||||  |||||||| ||||    
T  24058 aattatgagatttttgaaaattattagctgtgtcggtgtgt 24018  T

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Target: scaffold0122 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 345
Target Start/End: Complemental strand, 8795 - 8651
Alignment:
Q  201 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 300  Q
    |||||||||  |||||||||| ||| |||| ||||   || |||||||||| ||  ||||||||  |||| ||||||||||||| || ||| |||||| |    
T  8795 tatgaagcatggacacttctcggataaggcgtgtcttagtatcggacacgtatcacgtctgacatagacacgacaccgacacttataattatactgaact 8696  T
Q  301 atgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||||||||   |||| ||||   |||||| |||||||||||||    
T  8695 atgtgattttcctaaattattagaagtgtcgacgtgtcagtgtcc 8651  T

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Target: scaffold0122; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 338
Target Start/End: Complemental strand, 8067 - 8002
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    ||||||||||||| || |||||||| ||||| ||||||||| |||| |||| |||||||||||||||    
T  8067 gacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtc 8002  T

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Target: scaffold0039 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 343
Target Start/End: Original strand, 84925 - 85045
Alignment:
Q  223 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 322  Q
    |||||||| ||||| | |||||||||||||| ||||  |||| ||||||||||||||||  | || ||||||  |||||| ||||||| | |||| | ||    
T  84925 gattaggcgtgtcctgttgtcggacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatgattttcttaaattagta 85024  T
Q  323 tttgtgtcggcgtgtcagtgt 343  Q
     | ||||||||||||| ||||    
T  85025 gtggtgtcggcgtgtccgtgt 85045  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 23828 - 23788
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgatttttt 312  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  23828 gacaccgacacttgtaattacactgaattatgtgatttttt 23788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 350
Target Start/End: Original strand, 7033 - 7111
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatt 350  Q
    |||||| ||||||||| ||| ||| |||||||| ||||||| |||| ||||  ||||||| ||| ||||||||||||||    
T  7033 gacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtccgtatt 7111  T

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Target: scaffold0154 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 13549 - 13456
Alignment:
Q  194 tgtatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgta 287  Q
    ||||| |||||||| || |||||| ||| |||||||  | ||||| ||||| | |||||||||||| |||||||||| ||| ||||||| ||||    
T  13549 tgtatgctatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacacgaccccgacacatgta 13456  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 362
Target Start/End: Original strand, 7319 - 7403
Alignment:
Q  279 acacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgt-cagtgtccgtatttgtgcttcatag 362  Q
    |||||| || ||||||| |||||||||||||||  |||| |||| |||||||||||||| | ||||| ||||  |||||||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtccggtgtctgtatccgtgcttcatag 7403  T

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Target: scaffold0380 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 8721 - 8662
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgt 258  Q
    |||||||||||| |||||| ||  |||||||| | |||| ||||||||||||||||||||    
T  8721 cctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgt 8662  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 33375 - 33430
Alignment:
Q  283 ttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 338  Q
    ||||| |||||||||||||||| ||||||| |||| ||||  ||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

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Target: scaffold1528 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 1103 - 1025
Alignment:
Q  262 acaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag 340  Q
    |||||||||  |||| ||||| | ||||||||||||||||||| ||||||| |||| ||||   ||||||| |||||||    
T  1103 acaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcag 1025  T

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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 3431 - 3357
Alignment:
Q  196 tatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 270  Q
    ||||||||||||||| |||||| ||| |||||||| |||||| |||||   |||||||| |||| ||||| ||||    
T  3431 tatcctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgaca 3357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 21119 - 21026
Alignment:
Q  254 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 347  Q
    ||||||||||||||||| || |||||||| | || ||| || || |||||||||||| | |||| ||||   ||||| || |||||||||||||    
T  21119 cgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgt 21026  T

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Target: scaffold0168; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 21408 - 21372
Alignment:
Q  199 cctatgaagcacagacacttctcagattaggcatgtc 235  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  21408 cctatgaagcacagacacttctcggattaggcgtgtc 21372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 9956 - 9883
Alignment:
Q  272 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 345  Q
    ||||||||||| | || |||||||| ||| | ||||||| ||||| |||||  |||||||||||||| ||||||    
T  9956 gacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtcc 9883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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