View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21515_high_6 (Length: 319)
Name: NF21515_high_6
Description: NF21515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21515_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 45650064 - 45650359
Alignment:
| Q |
1 |
aatgcaagtaacatgcttattttcctattttaaggtttgttgaagttattaaaagaagaagaaaagtcgttgggatgatccggaaggaacccaaacagaa |
100 |
Q |
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| T |
45650064 |
aatgcaagtaacatgcttattttcctattttaaggtttgttgaagttattaaaagaagaagaaaagtcgttgggatgatccggaaggaacccaaacagaa |
45650163 |
T |
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| Q |
101 |
gggcactggtggtttggtttgtgccttgttcttgaaatttgagatttgactttcatttttatccnnnnnnnnnnnncgaatgttttgacttgcatctcca |
200 |
Q |
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| T |
45650164 |
gggcac---tggtttggtttgtgccttgttcttgaaatttgagatttgactttcatttttatccaaaaataaaaaacgaatgttttgacttgcatctcca |
45650260 |
T |
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| Q |
201 |
gcaatgcacatcttgcctgacccacgccgttgtgaatatggatggatatactctgattaatgtatatctatagaagtcccaacttgcatccaaatcatag |
300 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
45650261 |
gcaatgcacatcttgcctgacccacgccgttgtgaat----atggatatactttgattaatg--tatctatagaagtcccaacttgcatccaaatcatag |
45650354 |
T |
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