View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21515_low_12 (Length: 270)

Name: NF21515_low_12
Description: NF21515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21515_low_12
NF21515_low_12
[»] chr3 (33 HSPs)
chr3 (81-259)||(8318999-8319174)
chr3 (118-207)||(821515-821601)
chr3 (105-223)||(3116407-3116522)
chr3 (92-207)||(21303329-21303441)
chr3 (145-235)||(10744885-10744976)
chr3 (145-223)||(10917913-10917992)
chr3 (33-80)||(18547418-18547465)
chr3 (33-80)||(20884968-20885015)
chr3 (137-223)||(21301913-21302000)
chr3 (137-207)||(19908319-19908389)
chr3 (92-223)||(21325335-21325464)
chr3 (137-207)||(22349421-22349491)
chr3 (117-188)||(17438431-17438499)
chr3 (137-185)||(12411185-12411233)
chr3 (93-234)||(12805866-12806005)
chr3 (137-205)||(16245746-16245814)
chr3 (33-80)||(25230099-25230146)
chr3 (33-80)||(25237686-25237733)
chr3 (33-80)||(37045280-37045327)
chr3 (145-207)||(6289915-6289977)
chr3 (81-137)||(2723799-2723855)
chr3 (140-219)||(932742-932821)
chr3 (33-80)||(4067212-4067258)
chr3 (33-80)||(25238978-25239025)
chr3 (33-80)||(25802399-25802446)
chr3 (147-202)||(28728961-28729016)
chr3 (137-219)||(4650231-4650313)
chr3 (147-185)||(8557156-8557194)
chr3 (145-199)||(8889177-8889231)
chr3 (147-185)||(13908253-13908291)
chr3 (161-203)||(18458465-18458507)
chr3 (147-203)||(12759403-12759459)
chr3 (138-182)||(21825887-21825931)
[»] chr6 (32 HSPs)
chr6 (81-203)||(28933624-28933743)
chr6 (81-233)||(21907417-21907567)
chr6 (102-203)||(22410311-22410410)
chr6 (102-223)||(23143717-23143838)
chr6 (137-234)||(9726006-9726104)
chr6 (92-207)||(12183306-12183418)
chr6 (105-207)||(21672423-21672522)
chr6 (81-233)||(11176935-11177085)
chr6 (137-207)||(23645784-23645854)
chr6 (81-203)||(4339751-4339870)
chr6 (105-207)||(21679839-21679938)
chr6 (136-207)||(9516797-9516868)
chr6 (136-207)||(23844481-23844552)
chr6 (139-207)||(17729164-17729232)
chr6 (33-81)||(21312219-21312267)
chr6 (81-234)||(22567824-22567975)
chr6 (33-80)||(33774868-33774915)
chr6 (137-233)||(19244570-19244667)
chr6 (137-233)||(25927320-25927417)
chr6 (33-81)||(21312486-21312534)
chr6 (155-199)||(24657490-24657534)
chr6 (147-207)||(28589457-28589517)
chr6 (140-207)||(20005899-20005966)
chr6 (33-80)||(21311763-21311810)
chr6 (33-80)||(31821643-31821690)
chr6 (33-67)||(2891158-2891192)
chr6 (137-207)||(17299848-17299918)
chr6 (137-207)||(27737706-27737776)
chr6 (33-78)||(3653146-3653191)
chr6 (33-82)||(20126031-20126080)
chr6 (81-121)||(19244668-19244708)
chr6 (155-207)||(34478537-34478588)
[»] chr2 (31 HSPs)
chr2 (81-231)||(20174599-20174747)
chr2 (81-203)||(32085479-32085598)
chr2 (117-207)||(17743476-17743563)
chr2 (117-219)||(25196010-25196109)
chr2 (105-233)||(13776324-13776449)
chr2 (137-223)||(29719248-29719335)
chr2 (145-219)||(25530445-25530521)
chr2 (33-81)||(15639982-15640030)
chr2 (117-199)||(25535294-25535373)
chr2 (117-207)||(27909119-27909206)
chr2 (117-207)||(45621881-45621968)
chr2 (33-80)||(1912772-1912819)
chr2 (33-80)||(25433907-25433954)
chr2 (39-80)||(1707295-1707336)
chr2 (137-182)||(26667355-26667400)
chr2 (137-223)||(15339233-15339320)
chr2 (33-80)||(16379185-16379232)
chr2 (118-233)||(5777202-5777314)
chr2 (149-207)||(25070140-25070197)
chr2 (155-213)||(29142967-29143025)
chr2 (145-203)||(31804925-31804983)
chr2 (148-233)||(45553115-45553201)
chr2 (138-207)||(17349369-17349437)
chr2 (112-207)||(19200130-19200221)
chr2 (102-185)||(25618590-25618670)
chr2 (147-223)||(25888247-25888324)
chr2 (117-223)||(12953294-12953398)
chr2 (38-78)||(15620155-15620195)
chr2 (117-199)||(24090926-24091005)
chr2 (163-207)||(28770486-28770530)
chr2 (145-185)||(30411712-30411752)
[»] chr4 (40 HSPs)
chr4 (81-233)||(19092280-19092430)
chr4 (81-233)||(14648880-14649029)
chr4 (92-203)||(11490548-11490656)
chr4 (136-223)||(13128890-13128978)
chr4 (117-242)||(13692669-13692792)
chr4 (117-207)||(13908866-13908953)
chr4 (92-223)||(12578241-12578370)
chr4 (92-223)||(17671997-17672126)
chr4 (147-207)||(11521218-11521278)
chr4 (147-207)||(22526376-22526436)
chr4 (33-80)||(7381515-7381562)
chr4 (137-207)||(19882652-19882722)
chr4 (82-185)||(19929640-19929740)
chr4 (81-207)||(5679217-5679340)
chr4 (105-207)||(11933431-11933529)
chr4 (33-80)||(1645594-1645641)
chr4 (33-80)||(23943087-23943134)
chr4 (137-207)||(15164779-15164849)
chr4 (137-207)||(17216829-17216899)
chr4 (137-207)||(19374830-19374899)
chr4 (137-207)||(20315012-20315082)
chr4 (137-207)||(21323892-21323962)
chr4 (81-173)||(22357496-22357585)
chr4 (33-74)||(4414238-4414279)
chr4 (136-185)||(16730415-16730464)
chr4 (112-182)||(19636581-19636648)
chr4 (81-207)||(22175927-22176049)
chr4 (137-185)||(24639471-24639519)
chr4 (33-80)||(14352043-14352090)
chr4 (136-207)||(15047140-15047211)
chr4 (136-207)||(15107213-15107284)
chr4 (33-80)||(44471170-44471217)
chr4 (137-207)||(7582309-7582379)
chr4 (137-203)||(13992893-13992959)
chr4 (137-207)||(19492717-19492787)
chr4 (102-185)||(17337120-17337200)
chr4 (155-207)||(12839815-12839867)
chr4 (155-207)||(17709769-17709821)
chr4 (92-128)||(17951271-17951307)
chr4 (92-128)||(17955123-17955159)
[»] chr8 (25 HSPs)
chr8 (81-234)||(19786715-19786866)
chr8 (81-181)||(13697893-13697990)
chr8 (92-234)||(34497099-34497239)
chr8 (81-207)||(14528161-14528284)
chr8 (136-223)||(24114298-24114386)
chr8 (137-223)||(29382378-29382465)
chr8 (136-203)||(2637614-2637681)
chr8 (137-207)||(17101910-17101980)
chr8 (137-182)||(24269634-24269679)
chr8 (33-80)||(2044306-2044353)
chr8 (81-128)||(25182392-25182439)
chr8 (33-80)||(27926146-27926193)
chr8 (145-207)||(17976631-17976693)
chr8 (145-207)||(24904645-24904707)
chr8 (137-207)||(25226148-25226218)
chr8 (147-235)||(5850924-5851013)
chr8 (81-233)||(30806456-30806611)
chr8 (138-185)||(27659479-27659526)
chr8 (148-234)||(28276786-28276872)
chr8 (161-207)||(24110696-24110742)
chr8 (161-207)||(30783782-30783828)
chr8 (137-202)||(13315009-13315074)
chr8 (145-233)||(15238784-15238873)
chr8 (33-82)||(22705430-22705479)
chr8 (145-182)||(44011049-44011086)
[»] chr7 (57 HSPs)
chr7 (82-223)||(10586989-10587128)
chr7 (81-233)||(7318258-7318408)
chr7 (81-207)||(8313356-8313482)
chr7 (145-223)||(21230307-21230386)
chr7 (82-234)||(3734580-3734730)
chr7 (100-207)||(8054469-8054576)
chr7 (137-223)||(23099969-23100056)
chr7 (81-185)||(4785870-4785971)
chr7 (81-185)||(4818870-4818971)
chr7 (81-185)||(17153118-17153219)
chr7 (105-223)||(12181603-12181720)
chr7 (117-203)||(17077144-17077227)
chr7 (81-233)||(9574392-9574542)
chr7 (33-80)||(29038871-29038918)
chr7 (105-233)||(1584530-1584654)
chr7 (137-235)||(11803062-11803162)
chr7 (137-234)||(14195990-14196087)
chr7 (138-207)||(13759878-13759947)
chr7 (118-185)||(18662475-18662539)
chr7 (137-193)||(7492280-7492336)
chr7 (147-207)||(18466017-18466077)
chr7 (118-207)||(10584487-10584573)
chr7 (33-80)||(31743740-31743787)
chr7 (33-80)||(42515340-42515387)
chr7 (137-207)||(2563830-2563899)
chr7 (137-203)||(5530037-5530103)
chr7 (145-207)||(11221189-11221251)
chr7 (138-219)||(13418533-13418615)
chr7 (137-203)||(18368997-18369063)
chr7 (137-207)||(31492942-31493012)
chr7 (137-202)||(3329675-3329740)
chr7 (137-182)||(5108602-5108647)
chr7 (33-78)||(26957545-26957590)
chr7 (137-185)||(9731644-9731692)
chr7 (147-207)||(10937614-10937674)
chr7 (102-207)||(16365717-16365820)
chr7 (147-203)||(21912507-21912563)
chr7 (33-80)||(2611510-2611557)
chr7 (33-80)||(6747457-6747504)
chr7 (33-80)||(6747927-6747974)
chr7 (145-223)||(9864351-9864430)
chr7 (92-223)||(6013588-6013717)
chr7 (137-207)||(6042473-6042542)
chr7 (137-207)||(8979023-8979093)
chr7 (137-183)||(17203059-17203105)
chr7 (116-187)||(1872817-1872885)
chr7 (100-207)||(3191042-3191146)
chr7 (149-182)||(9078203-9078236)
chr7 (155-223)||(15869590-15869659)
chr7 (87-128)||(15869683-15869724)
chr7 (137-182)||(16059038-16059083)
chr7 (154-207)||(18661602-18661655)
chr7 (137-185)||(1848244-1848292)
chr7 (163-207)||(2953585-2953628)
chr7 (147-207)||(8054085-8054145)
chr7 (147-203)||(12391201-12391257)
chr7 (147-207)||(16306706-16306766)
[»] scaffold0005 (1 HSPs)
scaffold0005 (81-233)||(168263-168412)
[»] scaffold0622 (1 HSPs)
scaffold0622 (81-231)||(715-864)
[»] chr1 (33 HSPs)
chr1 (80-207)||(22664218-22664342)
chr1 (98-207)||(33190689-33190795)
chr1 (137-207)||(18736257-18736327)
chr1 (117-207)||(17610256-17610343)
chr1 (117-207)||(21449101-21449188)
chr1 (81-223)||(9787843-9787983)
chr1 (137-233)||(21847619-21847715)
chr1 (117-207)||(15543966-15544053)
chr1 (98-207)||(16179019-16179128)
chr1 (88-223)||(23037984-23038115)
chr1 (100-205)||(25405610-25405715)
chr1 (136-207)||(26648987-26649057)
chr1 (33-80)||(39582589-39582636)
chr1 (137-207)||(3591670-3591740)
chr1 (137-207)||(12208613-12208683)
chr1 (155-205)||(24306340-24306390)
chr1 (137-203)||(29242535-29242601)
chr1 (34-80)||(35009859-35009905)
chr1 (92-207)||(24281289-24281401)
chr1 (92-137)||(28008184-28008229)
chr1 (105-234)||(15813143-15813269)
chr1 (110-207)||(15813517-15813612)
chr1 (137-185)||(21666625-21666673)
chr1 (138-185)||(14779599-14779646)
chr1 (148-207)||(16787754-16787813)
chr1 (137-203)||(13345353-13345419)
chr1 (93-205)||(24214558-24214667)
chr1 (137-182)||(9401542-9401587)
chr1 (145-182)||(16916958-16916995)
chr1 (148-223)||(12012828-12012904)
chr1 (161-236)||(16359853-16359928)
chr1 (147-234)||(27117745-27117833)
chr1 (137-185)||(51473893-51473941)
[»] chr5 (28 HSPs)
chr5 (140-207)||(15375902-15375969)
chr5 (98-234)||(18937732-18937865)
chr5 (87-234)||(18208219-18208363)
chr5 (102-223)||(25550487-25550608)
chr5 (137-219)||(20315447-20315529)
chr5 (81-207)||(19283819-19283942)
chr5 (137-219)||(24140442-24140524)
chr5 (136-185)||(24245560-24245609)
chr5 (81-234)||(24266918-24267069)
chr5 (81-234)||(24343549-24343700)
chr5 (147-207)||(17185475-17185535)
chr5 (33-80)||(39147180-39147227)
chr5 (145-207)||(17171578-17171640)
chr5 (137-207)||(22755533-22755603)
chr5 (117-207)||(19004226-19004313)
chr5 (145-185)||(25402362-25402402)
chr5 (136-207)||(17431895-17431966)
chr5 (117-182)||(20549704-20549766)
chr5 (118-207)||(24852173-24852259)
chr5 (155-233)||(26110497-26110575)
chr5 (155-233)||(26121359-26121437)
chr5 (33-80)||(29679959-29680005)
chr5 (140-219)||(34128636-34128715)
chr5 (117-185)||(23388838-23388903)
chr5 (162-199)||(20858705-20858742)
chr5 (33-81)||(1822154-1822202)
chr5 (135-179)||(36175173-36175217)
chr5 (137-217)||(39434464-39434544)
[»] scaffold0062 (1 HSPs)
scaffold0062 (81-200)||(43191-43307)
[»] scaffold0102 (1 HSPs)
scaffold0102 (137-207)||(35549-35619)
[»] scaffold0024 (1 HSPs)
scaffold0024 (81-202)||(39601-39720)
[»] scaffold0333 (2 HSPs)
scaffold0333 (33-80)||(5268-5315)
scaffold0333 (33-80)||(4808-4855)
[»] scaffold0008 (1 HSPs)
scaffold0008 (148-207)||(54872-54931)
[»] scaffold0650 (1 HSPs)
scaffold0650 (137-234)||(6271-6369)
[»] scaffold0838 (1 HSPs)
scaffold0838 (155-207)||(2382-2434)
[»] scaffold0832 (1 HSPs)
scaffold0832 (155-207)||(2413-2465)
[»] scaffold0012 (1 HSPs)
scaffold0012 (33-81)||(246637-246685)
[»] scaffold0155 (1 HSPs)
scaffold0155 (112-185)||(35990-36060)
[»] scaffold0016 (1 HSPs)
scaffold0016 (117-185)||(3565-3630)
[»] scaffold1869 (1 HSPs)
scaffold1869 (137-206)||(406-475)
[»] scaffold0672 (1 HSPs)
scaffold0672 (148-185)||(1768-1805)
[»] scaffold0056 (1 HSPs)
scaffold0056 (145-218)||(21277-21350)
[»] scaffold0638 (1 HSPs)
scaffold0638 (137-185)||(840-888)
[»] scaffold0427 (1 HSPs)
scaffold0427 (117-183)||(2818-2881)
[»] scaffold0019 (1 HSPs)
scaffold0019 (155-203)||(11256-11304)


Alignment Details
Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 81 - 259
Target Start/End: Complemental strand, 8319174 - 8318999
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||| ||||||    
T  8319174 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgtt---tgtacgaaacgataatccctgtggatactatattctact 8319078  T
Q  181 tatcatttcattatttgataaacgattgctatacttgcctaatatgaccatcaactaccatgtctctcacctccctttg 259  Q
    ||||| ||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8319077 tatcacttcattacttggtaaacgattggtatacttgcctaatctgaccatcaactaccatgtctctcacctccctttg 8318999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 821515 - 821601
Alignment:
Q  118 aaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||||||||||||||||   |  ||||||||| ||||| ||||||||||||||||||||||||| || |||| ||| |||||||||    
T  821515 aaataagtaacatgaattgtt---tacacgaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaaacgatt 821601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 3116407 - 3116522
Alignment:
Q  105 tatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacg 204  Q
    |||| ||||||||||||||||||| |||||||||   || ||||||||| ||||||||||||||| |||||| |||||||| || |||| ||| |||||     
T  3116407 tatcgtcaacttaaaataagtaacgtgaattgtt---tggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttggtaaaca 3116502  T
Q  205 a-ttgctatacttgcctaat 223  Q
    | ||| || |||||||||||    
T  3116503 atttggtacacttgcctaat 3116522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 21303329 - 21303441
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcat 191  Q
    ||||| ||||||||||  |||||||||||||||||||   |||||||   || | ||||| | ||||  ||||| |||||||||||||||||||||| ||    
T  21303329 ctcttttattttatatagtcaacttaaaataagtaacggaaattgtt---tggatgaaacaacaatctttgtggctacgatactctacttatcattttat 21303425  T
Q  192 tatttgataaacgatt 207  Q
    |||||| |||||||||    
T  21303426 tatttggtaaacgatt 21303441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 10744976 - 10744885
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaac 235  Q
    ||||||||| ||||||| |||| |||||||||||||||||| || |||| ||| ||||||| ||| || ||||||||||| ||| |||||||    
T  10744976 acgaaacgacaatccctatggaaacgatactctacttatcactttattacttggtaaacgatttggtaaacttgcctaatttgatcatcaac 10744885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 10917992 - 10917913
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||||| | ||||| ||||||||||||||||||||||||| || |||||||| ||||||| ||| || |||||||||||    
T  10917992 acgaaacaacaatccatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgcctaat 10917913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 18547465 - 18547418
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  18547465 ggtttgtagggtcagtcggcaatgcttaaagtcgattgggatgttaca 18547418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 20885015 - 20884968
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  20885015 ggtttgtagggtcagtctgcaatgcttaaagtcgtttgggatgttaca 20884968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 21302000 - 21301913
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||||| |||||| || ||||| ||||||||||||||||||||||||| || |||| ||| ||||||| ||| || |||||||||||    
T  21302000 ttgtttggacgaaatgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaat 21301913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 19908389 - 19908319
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| |||||||||  | || ||||||||||||||| |||||||||||| |||||||| |||||||||    
T  19908389 ttgtttggacgaaacgacgacccttgtggatacgatactatacttatcattttattatttggtaaacgatt 19908319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 21325464 - 21325335
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcat 191  Q
    ||||| ||||||||||| | ||||||||||||||||||  |||||||   || ||||||||| |||   ||||||||||||||| ||||||||| || ||    
T  21325464 ctcttttattttatatcgttaacttaaaataagtaacacaaattgtt---tggacgaaacgacaatttttgtggatacgatactatacttatcagtttat 21325368  T
Q  192 tatttgataaacga-ttgctatacttgcctaat 223  Q
    || ||| ||||| | ||| || |||||||||||    
T  21325367 tacttggtaaacaatttggtacacttgcctaat 21325335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 22349491 - 22349421
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| |||   ||||||||||||||||||||||||| || |||||||| |||||||||    
T  22349491 ttgtttggacgaaacgacaatttatgtggatacgatactctacttatcactttattatttggtaaacgatt 22349421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 17438431 - 17438499
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcattt 188  Q
    |||||||||||| |||||||||   || ||||||||| ||||| |||||||| |||||||||||||||||||    
T  17438431 aaaataagtaacgtgaattgtt---tggacgaaacgacaatccatgtggatatgatactctacttatcattt 17438499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 12411233 - 12411185
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  12411233 ttgtttgtacgaaacgacaatccttgtggatacgatactctactaatca 12411185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 234
Target Start/End: Original strand, 12805866 - 12806005
Alignment:
Q  93 tcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcatt 192  Q
    |||| ||||||||| | || ||||||||||||||||   |||||||   || | ||||||| ||||| |||||||| |||||||||||||||| || |||    
T  12805866 tcttttattttataacgtcgacttaaaataagtaacgcaaattgtt---tggatgaaacgacaatccatgtggatatgatactctacttatcactttatt 12805962  T
Q  193 atttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    | ||| |||| || ||| || |||||||||||  |||||||||    
T  12805963 acttggtaaatgatttggtacacttgcctaatccgaccatcaa 12806005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 16245746 - 16245814
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga 205  Q
    ||||||| |||||| |||||||| |||||||| |||||||||||||||| || |||| ||| |||||||    
T  16245746 ttgtttggacgaaatgataatccatgtggatatgatactctacttatcactttattacttggtaaacga 16245814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 25230146 - 25230099
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||    
T  25230146 ggtttgtagggtcagtcgacaatgcttaaagtcgtttgagatgttaca 25230099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 25237733 - 25237686
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||    
T  25237733 ggtttgtagggtcagtcgacaatgcttaaagtcgtttgagatgttaca 25237686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 37045280 - 37045327
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  37045280 ggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 37045327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 6289977 - 6289915
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||| |||||||| |||||||| |||||||||||||||| || |||| ||| |||||||||    
T  6289977 acgaaatgataatccatgtggatatgatactctacttatcactttattacttggtaaacgatt 6289915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 2723799 - 2723855
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgt 137  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||||||||||||    
T  2723799 ctaacccttaactcatttattttatatcatcaaactaaaataagtaacatgaattgt 2723855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 932821 - 932742
Alignment:
Q  140 tttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgattgctatacttgcc 219  Q
    |||| |||||| || |||| ||||||||||||||||||| |||||| || |||| ||  |||||||||| || |||||||    
T  932821 tttggacgaaaggacaatctctgtggatacgatactctatttatcaatttattacttagtaaacgattgatacacttgcc 932742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 4067258 - 4067212
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  4067258 ggtttgtagggtcagtcggcaatgcttaaagtcgtct-ggatgttaca 4067212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 25239025 - 25238978
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  ||||||||||||||| || |||||||||    
T  25239025 ggtttgtagggtcagtcgacaatgcttaaagtcgtatgagatgttaca 25238978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 25802446 - 25802399
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    |||||||||||||||||   |||||||||||||||||| |||||||||    
T  25802446 ggtttgtagggtcagtcaacaatgcttaaagtcgtttgagatgttaca 25802399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 28729016 - 28728961
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaa 202  Q
    ||||||| ||||  ||||||||||||||||||||||||| || |||| ||||||||    
T  28729016 gaaacgacaatctatgtggatacgatactctacttatcactttattacttgataaa 28728961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 4650313 - 4650231
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgattgctatacttgcc 219  Q
    |||||||  ||||| || ||||||||||||||||||||| |||| |||| || |||| ||| |||| ||||| || |||||||    
T  4650313 ttgtttgggcgaaaggacaatccctgtggatacgatactttactcatcactttattacttggtaaatgattggtacacttgcc 4650231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 8557156 - 8557194
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  8557156 gaaacgacaatccatgtggatacgatactctacttatca 8557194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 8889177 - 8889231
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgat 199  Q
    |||||| || ||||||||||||||| ||||||||||||||| || |||| |||||    
T  8889177 acgaaaggacaatccctgtggatacaatactctacttatcactttattacttgat 8889231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 13908253 - 13908291
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  13908253 gaaacgataatccctatggatatgatactctacttatca 13908291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 18458465 - 18458507
Alignment:
Q  161 tgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||||||||||||||||||||| || |||| |||||||||    
T  18458465 tgtggatacgatactctacttatcactttattacttgataaac 18458507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 12759459 - 12759403
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||| ||| | ||||||||||||||||||||||||| || |||| ||| |||||    
T  12759459 gaaacgacaatacttgtggatacgatactctacttatcactttattacttggtaaac 12759403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 21825887 - 21825931
Alignment:
Q  138 tgtttgtacgaaacgataatccctgtggatacgatactctactta 182  Q
    |||||| ||||||| | ||||| ||||||||||||||||||||||    
T  21825887 tgtttggacgaaacaaaaatccatgtggatacgatactctactta 21825931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 28933624 - 28933743
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| ||||  |||||||   || ||||||||||||||| ||||||||||||||||||||    
T  28933624 ctaacccttatctcttttattttatatcatcaacttaaaataagcaacacaaattgtt---tggacgaaacgataatccttgtggatacgatactctact 28933720  T
Q  181 tatcatttcattatttgataaac 203  Q
    ||||| || |||||||| |||||    
T  28933721 tatcactttattatttgctaaac 28933743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 21907567 - 21907417
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||||||  || || ||   || ||||||||| ||||| ||||||||||||||| ||||    
T  21907567 ctaacccttatctcttttattttatatcatcaacttaaattaagtaacgcgacttttt---tggacgaaacgacaatccttgtggatacgatactttact 21907471  T
Q  181 tatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatca 233  Q
    ||||| || |||| ||| ||||||| ||| ||||||||||||||  ||||||||    
T  21907470 tatcactttattacttggtaaacgatttggtatacttgcctaatccgaccatca 21907417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 22410311 - 22410410
Alignment:
Q  102 ttatatcatcaacttaaaa-taagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgata 200  Q
    ||||||| ||||||||||| |||||||| |||||||||   || | ||||||| |||||||||||||||||||||||||||||||||| |||| ||| ||    
T  22410311 ttatatcgtcaacttaaaaataagtaacgtgaattgtt---tgaatgaaacgacaatccctgtggatacgatactctacttatcattttattacttggta 22410407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 23143838 - 23143717
Alignment:
Q  102 ttatatcatcaactta--aaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgat 199  Q
    ||||||| ||||||||  |||||||||||||||||||||   || ||||||||| |||||||||||||| |||||||||||||||| || |||| ||| |    
T  23143838 ttatatcgtcaacttacaaaataagtaacatgaattgtt---tggacgaaacgacaatccctgtggatatgatactctacttatcactttattaattggt 23143742  T
Q  200 aaacga-ttgctatacttgcctaat 223  Q
    ||| || ||| || |||||||||||    
T  23143741 aaatgatttggtacacttgcctaat 23143717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 9726104 - 9726006
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||| || |||| ||| ||||||| ||| || |||||||||||  |||||||||    
T  9726104 ttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaatccgaccatcaa 9726006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 12183306 - 12183418
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcat 191  Q
    ||||| ||||||||||| ||| ||||||||||||||| |||||||||    | |||||| || ||||| ||||||||||||||| ||||||||| || ||    
T  12183306 ctcttttattttatatcgtcaccttaaaataagtaacgtgaattgtta---ggacgaaatgacaatccatgtggatacgatactgtacttatcactttat 12183402  T
Q  192 tatttgataaacgatt 207  Q
    || ||| |||||||||    
T  12183403 tacttggtaaacgatt 12183418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 21672423 - 21672522
Alignment:
Q  105 tatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacg 204  Q
    |||| |||||| |||| |||||||| ||||||||   || |||||| |||||||| ||||||||||||||||||||||||| || |||| ||| ||||||    
T  21672423 tatcgtcaactaaaaaaaagtaacacgaattgtt---tggacgaaaagataatccatgtggatacgatactctacttatcactttattacttggtaaacg 21672519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 11177085 - 11176935
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||||||||| ||||||||||| |||| ||||||||||||||| |||   || |||  | ||||||| || || ||||||||||||||||||||    
T  11177085 ctaacccttatctcttttattttatatcgtcaatttaaaataagtaacacgaa---ttatttcgaagaaacgacaacccatgtggatacgatactctact 11176989  T
Q  181 tatcatttcattatttgataaacgatt-gctatacttgcctaatatgaccatca 233  Q
    ||||| || | || | | ||||||||| | || |||||||||||  ||||||||    
T  11176988 tatcactttagtactcggtaaacgattgggtacacttgcctaatccgaccatca 11176935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 23645784 - 23645854
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||| || |||| ||| |||||||||    
T  23645784 ttgtttggacgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatt 23645854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 203
Target Start/End: Complemental strand, 4339870 - 4339751
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||||||||| ||||||||||| ||||  ||||||||||||   |||||| |   || || |||||| ||||  ||||||||| ||||||||||    
T  4339870 ctaacccttatctcttttattttatatcgtcaaactaaaataagtaatgcgaattggt---tggacaaaacgacaatcattgtggatacaatactctact 4339774  T
Q  181 tatcatttcattatttgataaac 203  Q
    ||||| || ||||||||||||||    
T  4339773 tatcactttattatttgataaac 4339751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 21679839 - 21679938
Alignment:
Q  105 tatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacg 204  Q
    |||| |||||| |||| |||||||| ||||||||   || |||||| |||||||| ||||||||||||||||||||||||| || |||| ||  ||||||    
T  21679839 tatcgtcaactaaaaaaaagtaacacgaattgtt---tggacgaaaagataatccatgtggatacgatactctacttatcactttattacttagtaaacg 21679935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 9516868 - 9516797
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||||| || |||| | | |||||||||    
T  9516868 gttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattactaggtaaacgatt 9516797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 23844481 - 23844552
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||| ||||||||| ||||||| | |||| ||||||||||||||||||| |||| ||| |||||||||    
T  23844481 gttgtttggacgaaacgacaatccctttagatatgatactctacttatcattttattacttggtaaacgatt 23844552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 17729232 - 17729164
Alignment:
Q  139 gtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||| ||||||||| ||||  ||||||||||||||||||||||||| || |||| ||| |||||||||    
T  17729232 gtttggacgaaacgacaatctttgtggatacgatactctacttatcactttattacttggtaaacgatt 17729164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 21312219 - 21312267
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttacac 81  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  21312219 ggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttacac 21312267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 234
Target Start/End: Complemental strand, 22567975 - 22567824
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||| | ||| ||||||||||| | ||||||||||||||||| |||   |||||||| ||||||| | ||||| ||||||||| ||||| ||||    
T  22567975 ctaacccttaacccttttattttatatcgttaacttaaaataagtaacgtga---gttgtttggacgaaaccacaatccatgtggatacaatactatact 22567879  T
Q  181 tatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    | |||  | |||| ||| ||||| | ||| || |||||||||||  |||||||||    
T  22567878 tttcacgttattacttggtaaacaatttggtacacttgcctaatccgaccatcaa 22567824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 33774915 - 33774868
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  33774915 ggtttgtagggtcagtcggcaatgtttaaagtcgtctgggatgttaca 33774868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 19244667 - 19244570
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgat-tgctatacttgcctaatatgaccatca 233  Q
    ||||||| ||||||||| |||| || | ||| ||||||||||||||||| || |||| ||| |||||||| |  || ||||||||||| |||||||||    
T  19244667 ttgtttggacgaaacgacaatctctatagattcgatactctacttatcactttattacttggtaaacgatctagtaaacttgcctaatctgaccatca 19244570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 25927320 - 25927417
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacg-attgctatacttgcctaatatgaccatca 233  Q
    ||||||| ||||||| | ||||| ||||||||||||| ||||||||||| || |||| ||| ||||||  ||| || |||||||||||  ||||||||    
T  25927320 ttgtttggacgaaactaaaatccatgtggatacgatattctacttatcactttattacttggtaaacgttttggtacacttgcctaatccgaccatca 25927417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 21312486 - 21312534
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttacac 81  Q
    ||||||||||||||||||  |||| |||||||||| |||||||||||||    
T  21312486 ggtttgtagggtcagtcgacaatggttaaagtcgtctgggatgttacac 21312534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 24657490 - 24657534
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgat 199  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||    
T  24657490 aatccctgtggatacgatactcgacttatcattttattacttgat 24657534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 28589457 - 28589517
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||| ||||| ||||||||| ||||||||| ||  |||||||||||||||||    
T  28589457 gaaacgaaaatccatgtggctacgatactttacttatcactttgttatttgataaacgatt 28589517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 20005899 - 20005966
Alignment:
Q  140 tttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||| ||||||||| ||||| ||| ||||||||||||| ||||||| || |||| ||| |||||||||    
T  20005899 tttggacgaaacgaaaatccatgtagatacgatactctgcttatcactttattacttggtaaacgatt 20005966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 21311763 - 21311810
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    |||||||||||||| |||  ||||||||||||||| ||||||||||||    
T  21311763 ggtttgtagggtcaatcgacaatgcttaaagtcgtctgggatgttaca 21311810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 31821690 - 31821643
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    |||||||| |||||||||| ||||||||||||| | ||||||||||||    
T  31821690 ggtttgtatggtcagtcggcaatgcttaaagtcatatgggatgttaca 31821643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 2891192 - 2891158
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgt 67  Q
    ||||||||||||||||||| |||||||||||||||    
T  2891192 ggtttgtagggtcagtcggcaatgcttaaagtcgt 2891158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 17299848 - 17299918
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| || |||||| ||||||  || |||||||||||||||||||| || |||| ||| |||||||||    
T  17299848 ttgtttggactaaacgacaatcccgatgaatacgatactctacttatcactttattacttggtaaacgatt 17299918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 27737706 - 27737776
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||| | ||||| ||||| || |||||||||||||||| || |||| ||| |||||||||    
T  27737706 ttgtttggacgaaacaacaatccttgtgggtatgatactctacttatcactttattacttggtaaacgatt 27737776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 3653146 - 3653191
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgtta 78  Q
    |||||||||||||| |||| |||||||||| |||| ||||||||||    
T  3653146 ggtttgtagggtcaatcggcaatgcttaaaatcgtctgggatgtta 3653191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 20126080 - 20126031
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttacact 82  Q
    ||||||||||||| ||||  ||||||||||||||| ||||| ||||||||    
T  20126080 ggtttgtagggtccgtcgacaatgcttaaagtcgtctgggacgttacact 20126031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 19244708 - 19244668
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaat 121  Q
    ||||| || ||||||| ||||||||||||||||||||||||    
T  19244708 ctaaccctcatctcttttattttatatcatcaacttaaaat 19244668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 34478588 - 34478537
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||| |||||||||||||||||||||| || || |||||||| |||||||||    
T  34478588 aatccttgtggatacgatactctactta-cactttattatttggtaaacgatt 34478537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 231
Target Start/End: Original strand, 20174599 - 20174747
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||| || || ||||||||||||||||||||||||||||||||||||   ||||||| ||||||||| ||||| |||||| | |||||||||||    
T  20174599 ctaacccttaactattttattttatatcatcaacttaaaataagtaacatgaa---ttgtttggacgaaacgacaatccatgtggaaatgatactctact 20174695  T
Q  181 tatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccat 231  Q
    ||||| || |||| ||| ||||||| ||| || |||| |||||| |||||||    
T  20174696 tatcactttattacttggtaaacgatttggtacactttcctaatctgaccat 20174747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 203
Target Start/End: Complemental strand, 32085598 - 32085479
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||||| ||   | |||||  ||||||||| ||||| |||||||| |||||||||||    
T  32085598 ctaactcttaactcttttattttatatcgtcaacttaaaataagtaacacga---gctgtttagacgaaacgacaatccatgtggatatgatactctact 32085502  T
Q  181 tatcatttcattatttgataaac 203  Q
    ||||| || |||| ||| |||||    
T  32085501 tatcactttattacttggtaaac 32085479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 17743476 - 17743563
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||||||| ||||||||   || ||||||||||||||| ||||||||||||||||||||||||| || |||| ||| |||||||||    
T  17743476 aaaataagtaacacgaattgtt---tggacgaaacgataatccatgtggatacgatactctacttatcactttattacttggtaaacgatt 17743563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 219
Target Start/End: Complemental strand, 25196109 - 25196010
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgattgctatactt 216  Q
    |||||||||||| |||||||||   || |||||| || || ||||||||||| |||||||||||||||| || |||| ||| |||||||||| || ||||    
T  25196109 aaaataagtaacgtgaattgtt---tggacgaaaggacaacccctgtggatatgatactctacttatcactttattacttggtaaacgattggtacactt 25196013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 13776449 - 13776324
Alignment:
Q  105 tatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacg 204  Q
    |||| ||||||||||||||||||| ||    |||||||| |||||| || ||||  |||||||||||||||| |||||||| || ||||||| |||||||    
T  13776449 tatcgtcaacttaaaataagtaacgtgg---gttgtttggacgaaatgacaatctatgtggatacgatactc-acttatcactttattatttaataaacg 13776354  T
Q  205 a-ttgctatacttgcctaatatgaccatca 233  Q
    | |||||| ||||| |||||  ||||||||    
T  13776353 atttgctacacttgtctaattcgaccatca 13776324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 29719248 - 29719335
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||||| ||||||||| ||||| ||||||||||||| ||||||||||| || |||| ||| ||||||| ||| || |||||||||||    
T  29719248 ttgtttgaacgaaacgacaatccttgtggatacgataatctacttatcactttattacttggtaaacgatttggtacacttgcctaat 29719335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 25530521 - 25530445
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgat--aaacgattgctatacttgcc 219  Q
    |||||| || ||||||||||||||||||||||||||||||| || |||| |||||  ||||||||| || |||||||    
T  25530521 acgaaaggacaatccctgtggatacgatactctacttatcactttattacttgatgaaaacgattggtacacttgcc 25530445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 15639982 - 15640030
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttacac 81  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  15639982 ggttggtagggtcagtcggcaatgcttaaagtcgtctgggatgttacac 15640030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 25535373 - 25535294
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgat 199  Q
    ||||||||||||| ||||||||    | |||||| || ||||||||||||||||||||||||||||||| || |||| |||||    
T  25535373 aaaataagtaacaagaattgttc---ggacgaaaggacaatccctgtggatacgatactctacttatcactttattacttgat 25535294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 27909119 - 27909206
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||||||| |||||||||   || | ||||| |||| || ||||||||||||||||||||||||| || |||| ||| |||||||||    
T  27909119 aaaataagtaacgtgaattgtt---tggatgaaacaataacccatgtggatacgatactctacttatcactttattacttggtaaacgatt 27909206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 45621881 - 45621968
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||||||| ||||||||   || ||||||||| ||||| ||| ||||||||||||||||| ||| || |||| ||| |||||||||    
T  45621881 aaaataagtaacacgaattgtt---tggacgaaacgacaatccttgtagatacgatactctacttctcactttattacttggtaaacgatt 45621968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 1912772 - 1912819
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  1912772 ggtttgtagagtcagtcggcaatgcttaaagtcgtctgggatgttaca 1912819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 25433954 - 25433907
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  25433954 ggtttgtagggtcagtcggcaatgcttaaagtcatctgggatgttaca 25433907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 1707295 - 1707336
Alignment:
Q  39 tagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  1707295 tagggtcagtcggcaatgcttaaagtcgtctgggatgttaca 1707336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 26667400 - 26667355
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctactta 182  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||    
T  26667400 ttgttcgtacgaaaggaaaatccctgtggatacgatactctactta 26667355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 15339320 - 15339233
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||||| ||||||||| ||||| |||||||| |||||||||||| ||| || |||| ||| |||| || ||| || |||||||||||    
T  15339320 ttgtttggacgaaacgacaatccatgtggatatgatactctacttttcactttattacttggtaaatgatttggtacacttgcctaat 15339233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 16379185 - 16379232
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  |||||||||||| |||||| ||||||||    
T  16379185 ggtttgtagggtcagtcgacaatgcttaaagttgtttggaatgttaca 16379232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 5777314 - 5777202
Alignment:
Q  118 aaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgat-tgctatactt 216  Q
    ||||||||||| |||||||||   || ||||||||| ||||| | | ||| ||||||| ||||||   ||| ||||||||||||||||| || || ||||    
T  5777314 aaataagtaacgtgaattgtt---tggacgaaacgacaatccatatagattcgatactttacttaaacttt-attatttgataaacgatatgatacactt 5777219  T
Q  217 gcctaatatgaccatca 233  Q
    ||||||| |||||||||    
T  5777218 gcctaatctgaccatca 5777202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 25070197 - 25070140
Alignment:
Q  149 aacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||| ||||| ||||||| |||||||||||||| || || ||||||||||||||||||    
T  25070197 aacgacaatccttgtggatgcgatactctactta-cactttattatttgataaacgatt 25070140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 29143025 - 29142967
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaacgattgctata 213  Q
    ||||| |||||||||| ||||||||||||| ||| |||| ||||| |||||||| ||||    
T  29143025 aatccatgtggatacggtactctacttatcgttttattacttgattaacgattggtata 29142967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 31804925 - 31804983
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||||  |||| |||||||||| ||||||||||||||| || |||||||| |||||    
T  31804925 acgaaacggcaatctctgtggatacaatactctacttatcactttattatttggtaaac 31804983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 45553201 - 45553115
Alignment:
Q  148 aaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatca 233  Q
    |||||| |||||||||  |||||||| | ||||||||| || |||| ||||||||||| ||| || ||||||||||| | |||||||    
T  45553201 aaacgacaatccctgtaaatacgatattttacttatcactttattacttgataaacgatttggtacacttgcctaatctaaccatca 45553115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 17349437 - 17349369
Alignment:
Q  138 tgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||| ||||||||| ||||  |||||||||||||||||||||| || || |||| ||| |||||||||    
T  17349437 tgtttggacgaaacgacaatctttgtggatacgatactctactta-cactttattacttggtaaacgatt 17349369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 19200130 - 19200221
Alignment:
Q  112 aacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||||||||||  |||   |||||||| | ||||||| ||||| |||||||||||||||| ||||||||  | |||||||| |||| ||||    
T  19200130 aacttaaaataagtaatgtga---gttgtttggatgaaacgacaatccttgtggatacgatactc-acttatcacattattatttggtaaaagatt 19200221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 25618670 - 25618590
Alignment:
Q  102 ttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||| |||||| ||||||||| ||  ||||||||   |  ||||||||| ||||| |||||||| ||||||||||||||||    
T  25618670 ttatatcgtcaactaaaaataagttacgcgaattgtt---tagacgaaacgacaatccatgtggatatgatactctacttatca 25618590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 25888247 - 25888324
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||||| ||||| ||||||||||||||| ||||||||| || |||| ||| ||||| | ||| || |||||||||||    
T  25888247 gaaacgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacaatttggtacacttgcctaat 25888324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 12953294 - 12953398
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatact 215  Q
    ||||||||||||  ||||||||  ||| ||||||||| ||||| |||||| || ||||||||||||| | || |||| |||||||| || ||| || |||    
T  12953294 aaaataagtaacgcgaattgtt--ttg-acgaaacgacaatccatgtggacacaatactctacttattactttattacttgataaatgatttggtacact 12953390  T
Q  216 tgcctaat 223  Q
    ||||||||    
T  12953391 tgcctaat 12953398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 15620155 - 15620195
Alignment:
Q  38 gtagggtcagtcggtaatgcttaaagtcgtttgggatgtta 78  Q
    |||||||||||||| ||||||||||||||| || |||||||    
T  15620155 gtagggtcagtcggaaatgcttaaagtcgtctgagatgtta 15620195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 24090926 - 24091005
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgat 199  Q
    ||||||||||||| ||||||||   || |||||| || ||||| ||||||||||||| |||| |||||| || |||| |||||    
T  24090926 aaaataagtaacaagaattgtt---tggacgaaaggacaatccatgtggatacgatattctatttatcactttattacttgat 24091005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 28770486 - 28770530
Alignment:
Q  163 tggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||||||||||||||||| || |||||||| |||| ||||    
T  28770486 tggatacgatactctacttatcactttattatttggtaaaggatt 28770530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 30411752 - 30411712
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatca 185  Q
    |||||| || ||||||||| |||||||||||||||||||||    
T  30411752 acgaaatgacaatccctgttgatacgatactctacttatca 30411712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 19092430 - 19092280
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||| ||| |||   |||||||| ||||||||| ||||| |||| || ||||||||| ||    
T  19092430 ctaactcttatctcttttatttaatatcgtcaacttaaaataagcaacgtga---gttgtttggacgaaacgacaatccatgtgaatgcgatactcttct 19092334  T
Q  181 tatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatca 233  Q
    ||||| || |||| ||||||||| | ||| || ||||||||||| |||||||||    
T  19092333 tatcactttattacttgataaacaatttggtacacttgcctaatctgaccatca 19092280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 14649029 - 14648880
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| ||||| |||| ||||||||||| |||||||||||||||||||| ||   | | |||  | ||||||| ||||| ||||||||||||||||||||    
T  14649029 ctaacccttatgtcttttattttatatcgtcaacttaaaataagtaacacga---gctatttagaagaaacgacaatcc-tgtggatacgatactctact 14648934  T
Q  181 tatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatca 233  Q
    ||||| || |||| ||| ||||||| ||| || ||||||||||| |||||||||    
T  14648933 tatcactttattacttggtaaacgatttggtacacttgcctaatctgaccatca 14648880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 11490656 - 11490548
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcat 191  Q
    ||||| ||||||||||| ||||  |||||||||||||  ||||||||   || | ||||| | ||||||||||||||||||||||||||||||| || ||    
T  11490656 ctcttttattttatatcgtcaaactaaaataagtaacgcgaattgtt---tggaagaaactacaatccctgtggatacgatactctacttatcactttat 11490560  T
Q  192 tatttgataaac 203  Q
    || |||||||||    
T  11490559 tacttgataaac 11490548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 13128890 - 13128978
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    |||||||| ||||||||| ||||||| ||||||| |||||||||||||||||| |||| ||| ||||||| ||| || |||||||||||    
T  13128890 gttgtttggacgaaacgacaatccctatggatacaatactctacttatcattttattacttggtaaacgatttggtacacttgcctaat 13128978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 13692669 - 13692792
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatact 215  Q
    ||||||||||||| ||||||||   ||  |||||||| ||||| |||||||| |||||||||||||||| || |||| ||| ||||||| ||| || |||    
T  13692669 aaaataagtaacacgaattgtt---tggtcgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacgatttggtacact 13692765  T
Q  216 tgcctaatatgaccatcaactaccatg 242  Q
    |||||||| ||||||||| | ||||||    
T  13692766 tgcctaatctgaccatcatccaccatg 13692792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 13908953 - 13908866
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||||||| ||||||||   || ||||||||| ||||| ||||||||||||||||||||||||| || |||| ||| |||||||||    
T  13908953 aaaataagtaacacgaattgtt---tggacgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaacgatt 13908866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 12578241 - 12578370
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcat 191  Q
    ||||| ||||||||||| ||||||||||||||| |||   ||   ||||||| || |||||| ||||| |||||||||||||||||| |||||| || ||    
T  12578241 ctcttttattttatatcgtcaacttaaaataagaaacgcaaa---ttgtttggacaaaacgacaatccatgtggatacgatactctaattatcactttat 12578337  T
Q  192 tatttgataaacga-ttgctatacttgcctaat 223  Q
    |||||| |||| || ||| || |||||||||||    
T  12578338 tatttggtaaatgatttggtacacttgcctaat 12578370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 17672126 - 17671997
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcat 191  Q
    ||||| ||||||||||| | |||||||||||||||||  ||   |||||||  ||||||| | ||||| ||||||||| ||||||||||||||| || ||    
T  17672126 ctcttttattttatatcgttaacttaaaataagtaacgcga---gttgtttagacgaaacaacaatccatgtggatacaatactctacttatcactttat 17672030  T
Q  192 tatttgataaacga-ttgctatacttgcctaat 223  Q
    || ||| ||||||| ||| || |||||||||||    
T  17672029 tacttggtaaacgatttggtacacttgcctaat 17671997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 11521218 - 11521278
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||| |||| |||||||||||||||||||| || ||||||||||||||||||    
T  11521218 gaaacgacaatccatgtgtatacgatactctacttatcactttattatttgataaacgatt 11521278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 22526436 - 22526376
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||| | ||||||||||||||||||||||||| || ||||||||||||||||||    
T  22526436 gaaacgacaattcatgtggatacgatactctacttatcactttattatttgataaacgatt 22526376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 7381515 - 7381562
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  7381515 ggtttgtagggtcagtcggcaatgcttaaagtcgtatgggatgttaca 7381562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 19882722 - 19882652
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| ||||| ||| |||||||||||||||| |||| || |||| |||||||||||||    
T  19882722 ttgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattacttgataaacgatt 19882652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 19929640 - 19929740
Alignment:
Q  82 taactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctactt 181  Q
    |||| |||||||||| ||||||||||  |||||||||||||||||||| |    | | |||  ||||||||| ||||| |||||||||||||||||| ||    
T  19929640 taacccttatctcttttattttatattgtcaacttaaaataagtaacacg---ggctatttagacgaaacgacaatccatgtggatacgatactctattt 19929736  T
Q  182 atca 185  Q
    ||||    
T  19929737 atca 19929740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 5679340 - 5679217
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||| ||||| ||||||||||| | |||||||||||||||||  ||||||||   || ||||||| | | | | ||| ||||||||||||||||    
T  5679340 ctaacccttaactcttttattttatatcgttaacttaaaataagtaacgcgaattgtt---tggacgaaacaaaagttcatgtagatacgatactctact 5679244  T
Q  181 tatcatttcattatttgataaacgatt 207  Q
     |||| || |||| ||| |||||||||    
T  5679243 aatcactttattacttggtaaacgatt 5679217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 11933529 - 11933431
Alignment:
Q  105 tatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacg 204  Q
    ||||||||| ||||||||||||||  ||   |||||||| ||||||||| ||||| |||||  ||||||||| |||||||| ||||||| ||| ||||||    
T  11933529 tatcatcaaattaaaataagtaacgcga---gttgtttggacgaaacgacaatccatgtggtcacgatactc-acttatcacttcattacttggtaaacg 11933434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 1645641 - 1645594
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  1645641 ggtttgtagggtcagttggcaatgcttaaagtcgtatgggatgttaca 1645594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 23943134 - 23943087
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  23943134 ggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 23943087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 15164849 - 15164779
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| |||||| || ||||||||||||||||||||||| ||||| | || |||| ||| |||||||||    
T  15164849 ttgtttggacgaaatgacaatccctgtggatacgatactctgcttattaattgattacttggtaaacgatt 15164779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 17216899 - 17216829
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| ||||| |||||||| |||||||||||||||| || |||  ||| |||||||||    
T  17216899 ttgtttggacgaaacgacaatccatgtggatatgatactctacttatcactttattgcttggtaaacgatt 17216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 19374830 - 19374899
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| || |||||| |||| | ||||||||||||||||||||| ||||| |||| |||||||||||||    
T  19374830 ttgtttggacaaaacgacaatctcagtggatacgatactctactta-cattttattacttgataaacgatt 19374899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 20315082 - 20315012
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| ||||| |||||||| |||| ||||||||||| || |||| ||| |||||||||    
T  20315082 ttgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttggtaaacgatt 20315012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 21323892 - 21323962
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| ||||  |||||||||||||||||||| ||||  | |||||||| |||||||||    
T  21323892 ttgtttggacgaaacgacaatctatgtggatacgatactctactgatcacattattatttggtaaacgatt 21323962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 22357496 - 22357585
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgata 173  Q
    |||||||||||||||| | ||||||||| ||||||| |||||||||||| |||    |||||  | ||||||| ||||| |||||||||||||    
T  22357496 ctaactcttatctcttattttttatatcgtcaactttaaataagtaacacgaa---ctgtttaaatgaaacgacaatccatgtggatacgata 22357585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 4414279 - 4414238
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggat 74  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  4414279 ggtttgtagggtcagtcggcaatgcttaaagtcgtatgggat 4414238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 16730415 - 16730464
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    |||||||| ||||||||| ||||| | |||||||||||||||||||||||    
T  16730415 gttgtttggacgaaacgaaaatccttttggatacgatactctacttatca 16730464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 19636581 - 19636648
Alignment:
Q  112 aacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctactta 182  Q
    ||||||||||||||||||||||   ||||||| | ||||||| ||||||| | ||||| ||||||||||||    
T  19636581 aacttaaaataagtaacatgaa---ttgtttggatgaaacgacaatccctatagatacaatactctactta 19636648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 22175927 - 22176049
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||| ||||| |||||||||||||||||| ||||||| || |  ||||||||   || |  ||| || |||| || ||||||| ||||||||||    
T  22175927 ctaacccttaactcttttattttatatcatcaactcaaaataatta-cgcgaattgtt---tggagaaaatgacaatctctatggatacaatactctact 22176022  T
Q  181 tatcatttcattatttgataaacgatt 207  Q
    ||||| || |||| |||||||||||||    
T  22176023 tatcactttattacttgataaacgatt 22176049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 24639471 - 24639519
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||| || |||||| ||||| |||||||||||||||||||||||||    
T  24639471 ttgtttggacaaaacgaaaatccatgtggatacgatactctacttatca 24639519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 14352043 - 14352090
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    |||||||| |||||||| | ||||||||||||||| ||||||||||||    
T  14352043 ggtttgtatggtcagtcagcaatgcttaaagtcgtatgggatgttaca 14352090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 15047211 - 15047140
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||  ||||||||| ||||| ||| |||||||| |||||||||||| || |||| ||| |||||||||    
T  15047211 gttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaacgatt 15047140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 15107213 - 15107284
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||  ||||||||| ||||| ||| |||||||| |||||||||||| || |||| ||| |||||||||    
T  15107213 gttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaacgatt 15107284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 44471217 - 44471170
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  ||| |||||||||||||||| |||||||    
T  44471217 ggtttgtagggtcagtcgacaattcttaaagtcgtttggggtgttaca 44471170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 7582379 - 7582309
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||| | ||||| |||||||| |||||||||||||||| || |||| ||| |||| ||||    
T  7582379 ttgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttggtaaatgatt 7582309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 13992893 - 13992959
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||| || |||||| ||||| |||||||||||||||||||||| || || |||| ||| |||||    
T  13992893 ttgtttggacaaaacgaaaatccatgtggatacgatactctacttaccactttattacttggtaaac 13992959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 19492717 - 19492787
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| | ||||||| ||| | ||||||||||||||||||||||||  || |||| ||| |||||||||    
T  19492717 ttgtttggatgaaacgacaattcttgtggatacgatactctacttatccctttattacttggtaaacgatt 19492787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 17337120 - 17337200
Alignment:
Q  102 ttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||| |||||| ||||||||||||   ||   ||||||| |||||| || |||| || |||||||||||||||||||||||    
T  17337120 ttatatcgtcaactaaaaataagtaacgcaaa---ttgtttggacgaaatgacaatctctttggatacgatactctacttatca 17337200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 12839815 - 12839867
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||| ||||||||||||||||||| |||||||| |||| ||| ||| |||||    
T  12839815 aatccttgtggatacgatactctacctatcattttattaattggtaagcgatt 12839867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 17709821 - 17709769
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||| ||||||||||||||| || |||| ||| |||||||||    
T  17709821 aatccctatggatacaatactctacttatcactttattacttggtaaacgatt 17709769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 17951271 - 17951307
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaac 128  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  17951271 ctcttttattttatatcgtcaacttaaaataagtaac 17951307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 17955123 - 17955159
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaac 128  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  17955123 ctcttttattttatatcgtcaacttaaaataagtaac 17955159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 234
Target Start/End: Complemental strand, 19786866 - 19786715
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||||||| ||   |||||||| ||||||||| | ||||| |||||| |||||| ||||    
T  19786866 ctaacttttatctcttttattttatatcatcaacttaaaacaagtaacacga---gttgtttggacgaaacgacagtccctatggatatgatactttact 19786770  T
Q  181 tatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    | ||| || |||| ||| ||||||| ||| |||||||| |||||  |||||||||    
T  19786769 tgtcactttattacttggtaaacgatttggtatacttgtctaatccgaccatcaa 19786715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 13697990 - 13697893
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||  | |  |||||||| ||||||||| ||||| ||||||||||||||||||||    
T  13697990 ctaacccttatctcttgtattttatatcgtcaacttaaaataagtaac--gca-ggttgtttggacgaaacgaaaatccttgtggatacgatactctact 13697894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 34497239 - 34497099
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcat 191  Q
    ||||| ||||||||||| |||| |||||||||||||| || ||||||   || ||||||||| | || || |||||||||||||||||| |||| || ||    
T  34497239 ctcttttattttatatcgtcaatttaaaataagtaacgtggattgtt---tggacgaaacgacagtctctatggatacgatactctactaatcactttat 34497143  T
Q  192 tatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    || ||| ||||||| ||| || ||||||||||| ||||||||||    
T  34497142 tacttggtaaacgatttgatagacttgcctaatctgaccatcaa 34497099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 14528284 - 14528161
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||| || || ||||||||||| |||  |||||||||||||| |||   |||||||| ||||||||| ||||  |||||||||||||||||||     
T  14528284 ctaacccttaactattttattttatatcgtcagtttaaaataagtaacgtga---gttgtttggacgaaacgacaatctatgtggatacgatactctacg 14528188  T
Q  181 tatcatttcattatttgataaacgatt 207  Q
    ||||| || |||| ||| |||||||||    
T  14528187 tatcactttattacttggtaaacgatt 14528161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 24114298 - 24114386
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||||| |||| ||| ||||| | ||| || |||||||||||    
T  24114298 gttgtttggacgaaacgacaatccctgcggatacgatactctacttatcattttattacttggtaaacaatttggtacacttgcctaat 24114386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 29382378 - 29382465
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||||||| || |||| ||| ||||||| ||| || |||||||||||    
T  29382378 ttgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaat 29382465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 2637681 - 2637614
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    |||||||  ||||||||| ||||| ||||||||||||||||||||||||| || |||| |||||||||    
T  2637681 gttgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttgataaac 2637614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 17101910 - 17101980
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||| || |||| ||| |||||||||    
T  17101910 ttgtttggatgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatt 17101980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 24269679 - 24269634
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctactta 182  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  24269679 ttgtttggacgaaacgacaatccctgtggatacgatactctactta 24269634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 2044306 - 2044353
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||    
T  2044306 ggtttgtagggtcagtcaccaatgcttaaagtcgtttgggatgttaca 2044353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 25182392 - 25182439
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaac 128  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  25182392 ctaacccttatctcttttattttatatcgtcaacttaaaataagtaac 25182439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 27926146 - 27926193
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  27926146 ggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 27926193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 17976693 - 17976631
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||| ||||  ||||||||||||||||||||||||| || |||| |||||||| ||||    
T  17976693 acgaaacgaaaatctttgtggatacgatactctacttatcactttattacttgataaatgatt 17976631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 24904707 - 24904645
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||| |||| ||||||||| |||||||||||||||| || |||||||| |||| ||||    
T  24904707 acgaaacgacaatcactgtggatatgatactctacttatcactttattatttggtaaatgatt 24904645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 25226218 - 25226148
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| | ||||| |||||||||||  ||||||||||| |||||||| || |||| |||||||||||||    
T  25226218 ttgtttggaggaaacaataatccctgtatatacgatactcaacttatcactttattacttgataaacgatt 25226148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 5851013 - 5850924
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt-gctatacttgcctaatatgaccatcaac 235  Q
    ||||||| ||||  ||||||||||||||||||||||||| || |||| ||| ||||||||| | || ||||| |||||  ||||||||||    
T  5851013 gaaacgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgattaggtacacttgactaatccgaccatcaac 5850924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 233
Target Start/End: Original strand, 30806456 - 30806611
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtgga-----tacgatact 175  Q
    ||||| |||| ||||| ||||||||||| ||||  |||||||||||||   |||||||   || | ||||||| ||||| ||||||     |||||||||    
T  30806456 ctaacccttaactcttttattttatatcgtcaaactaaaataagtaacgcaaattgtt---tggatgaaacgacaatccttgtggactggatacgatact 30806552  T
Q  176 ctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatca 233  Q
    |||||||||| || |||| || |||||||| ||| || |||||||||||  ||||||||    
T  30806553 ctacttatcactttattacttaataaacgatttgatacacttgcctaatccgaccatca 30806611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 27659526 - 27659479
Alignment:
Q  138 tgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    |||||| ||||||||| ||||| ||| |||||||||||||||||||||    
T  27659526 tgtttggacgaaacgacaatccttgtagatacgatactctacttatca 27659479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 28276786 - 28276872
Alignment:
Q  148 aaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    |||| ||||||||| |||||||||||||| |||||||| ||  ||||||| ||||||| ||| || |||||||||||  |||||||||    
T  28276786 aaactataatccctatggatacgatactc-acttatcacttttttatttggtaaacgatttgatacacttgcctaatccgaccatcaa 28276872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 24110696 - 24110742
Alignment:
Q  161 tgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||||||||||||||||||||||| |||| ||| |||| ||||    
T  24110696 tgtggatacgatactctacttatcattttattacttggtaaatgatt 24110742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 30783782 - 30783828
Alignment:
Q  161 tgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||||||||||||||||||| || |||| ||| |||||||||    
T  30783782 tgtggatacgatactctacttatcactttattacttggtaaacgatt 30783828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 13315009 - 13315074
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaa 202  Q
    ||||||| ||||||| | ||||| ||||||||||||||| ||||||||| || |||| ||| ||||    
T  13315009 ttgtttggacgaaacaaaaatccatgtggatacgatactatacttatcactttattacttggtaaa 13315074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 15238873 - 15238784
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatca 233  Q
    ||||||||| ||| | ||||||||||||| ||||||||||||||  ||| ||| ||||| | ||| || |||||||||||  ||||||||    
T  15238873 acgaaacgacaattcatgtggatacgataatctacttatcattttcttacttggtaaacaatttgatacacttgcctaattcgaccatca 15238784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 22705430 - 22705479
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttacact 82  Q
    ||||| ||| |||| |||| ||||||||||||||||||| ||||||||||    
T  22705430 ggtttatagtgtcaatcggcaatgcttaaagtcgtttggaatgttacact 22705479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 44011049 - 44011086
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctactta 182  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  44011049 acgaaacgacaatccatgtggatacgatactctactta 44011086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 10586989 - 10587128
Alignment:
Q  82 taactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctactt 181  Q
    |||| ||||| |||| ||||||||||  | |||||||||||||||||||||   |||||||  ||||||||| ||||||||| |||||||||||||||||    
T  10586989 taacccttatttcttttattttatattgtaaacttaaaataagtaacatga---gttgtttagacgaaacgacaatccctgtagatacgatactctactt 10587085  T
Q  182 atcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    |||| || |||| ||| ||||||| ||| || |||||||||||    
T  10587086 atcactttattacttggtaaacgatttggtacacttgcctaat 10587128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 7318408 - 7318258
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||   ||   | |||||  ||||||||| ||||| ||||||||||||||||||||    
T  7318408 ctaacccttatctcttttattttatatcgtcaacttaaaataagtaatgcga---gctgtttagacgaaacgacaatccatgtggatacgatactctact 7318312  T
Q  181 tatcatttcattatttgataaacgat-tgctatacttgcctaatatgaccatca 233  Q
    ||||| || |||| ||| |||||||| || || |||||||||||  ||||||||    
T  7318311 tatcactttattacttggtaaacgatatggtacacttgcctaatccgaccatca 7318258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 8313356 - 8313482
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||| ||||| ||||||||| | ||||||||||||||||||||  | | |||||||  ||||||||| ||||||||||||||||||| ||||||    
T  8313356 ctaacccttaactcttttattttataccttcaacttaaaataagtaacacaattagttgtttagacgaaacgacaatccctgtggatacgataatctact 8313455  T
Q  181 tatcatttcattatttgataaacgatt 207  Q
    ||||| || |||| ||| |||| ||||    
T  8313456 tatcactttattacttggtaaatgatt 8313482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 21230386 - 21230307
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||||||    
T  21230386 acgaaacgataatccctatgaatacgatactctacttatcattttattatttggtaaacgatttgatatacttgcctaat 21230307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 234
Target Start/End: Complemental strand, 3734730 - 3734580
Alignment:
Q  82 taactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctactt 181  Q
    |||| |||| ||||| ||||||||||| ||||||||||||||||||| |||||||||   || || |||| | ||| | |||||||||||||||||||||    
T  3734730 taacccttaactcttttattttatatcgtcaacttaaaataagtaacgtgaattgtt---tggaccaaacaacaattcatgtggatacgatactctactt 3734634  T
Q  182 atcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    |||| || |||| ||| ||||  | ||| || |||| |||||| ||||||||||    
T  3734633 atcactttattacttggtaaaaaatttggtacacttacctaatctgaccatcaa 3734580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 8054469 - 8054576
Alignment:
Q  100 ttttatatcatcaactta---aaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattattt 196  Q
    ||||||||| ||||||||   |||||||||||| ||||||||   || ||||||||| ||| |||||| |||||||||||||||||||| || |||||||    
T  8054469 ttttatatcgtcaacttacaaaaataagtaacaagaattgtt---tggacgaaacgacaattcctgtgaatacgatactctacttatcactttattattt 8054565  T
Q  197 gataaacgatt 207  Q
    | |||||||||    
T  8054566 ggtaaacgatt 8054576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 23099969 - 23100056
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||||| ||||||||| ||||  ||||||||||||||||||||||||| || |||||||| ||||||| ||| || |||||||||||    
T  23099969 ttgtttggacgaaacgacaatctatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgcctaat 23100056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 4785971 - 4785870
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||| ||||| ||||||||||| |||||| |||||||||||| |||| || |   || ||||||||| |||||||||||||  |||||||||||    
T  4785971 ctaacccttaactcttttattttatatcgtcaactaaaaataagtaacgtgaagtgct---tggacgaaacgacaatccctgtggatgtgatactctact 4785875  T
Q  181 tatca 185  Q
    |||||    
T  4785874 tatca 4785870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 4818971 - 4818870
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||| ||||| ||||||||||| |||||| |||||||||||| |||| || |   || ||||||||| |||||||||||||  |||||||||||    
T  4818971 ctaacccttaactcttttattttatatcgtcaactaaaaataagtaacgtgaagtgct---tggacgaaacgacaatccctgtggatgtgatactctact 4818875  T
Q  181 tatca 185  Q
    |||||    
T  4818874 tatca 4818870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 17153118 - 17153219
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||||||||| |||||||| || |||||||||||||||||||  ||   | |||||  ||||||||| ||||  ||||||||||||||||||||    
T  17153118 ctaacccttatctcttttattttatgtcgtcaacttaaaataagtaacgcga---gctgtttagacgaaacgacaatctatgtggatacgatactctact 17153214  T
Q  181 tatca 185  Q
    |||||    
T  17153215 tatca 17153219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 223
Target Start/End: Complemental strand, 12181720 - 12181603
Alignment:
Q  105 tatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacg 204  Q
    |||| |||||||||||||||||||  |||||||  || | ||||||||| ||| | |||||||||| |||||||||| ||| || |||| || |||||||    
T  12181720 tatcgtcaacttaaaataagtaactcgaattgt--ttgggacgaaacgacaattcatgtggatacggtactctacttctcactttattactttataaacg 12181623  T
Q  205 a-ttgctatacttgcctaat 223  Q
    | ||| ||||||||||||||    
T  12181622 atttggtatacttgcctaat 12181603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 17077227 - 17077144
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||||||||||||||||||   || ||||||||| ||||||  ||||||| ||||||||| ||||| || ||||||||||||||    
T  17077227 aaaataagtaacatgaattgtt---tggacgaaacgacaatccccatggatacaatactctacctatcactttattatttgataaac 17077144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 9574542 - 9574392
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||| ||||| ||||||||||| |||||||||||||| ||||  ||   || ||||  ||||||| | |||| |||| ||||||||||||||||    
T  9574542 ctaacccttaactcttttattttatatcgtcaacttaaaataaataacgcga---gtcgtttagacgaaacaacaatctctgtagatacgatactctact 9574446  T
Q  181 tatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatca 233  Q
    ||||| || |||  ||| ||||||| ||  || ||||||||||| |||||||||    
T  9574445 tatcactttattccttggtaaacgatttagtacacttgcctaatctgaccatca 9574392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 29038918 - 29038871
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  29038918 ggtttgtagggtcagtcggcaatgcttaaagtcgtctgggatgttaca 29038871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 1584654 - 1584530
Alignment:
Q  105 tatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacg 204  Q
    |||| |||||||||||||||||||  || |||||   |  ||||||| | |||||||||||||||||||||| |||||||| || |||| ||| |||| |    
T  1584654 tatcgtcaacttaaaataagtaacgcgatttgtt---tagacgaaacaacaatccctgtggatacgatactc-acttatcactttattacttggtaaatg 1584559  T
Q  205 attgctatacttgcctaatatgaccatca 233  Q
    |||| || |||||||||||  ||||||||    
T  1584558 attggtacacttgcctaatccgaccatca 1584530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 11803162 - 11803062
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcatta-tttgataaacgattgctatacttgc--ctaatatgaccatca 233  Q
    ||||||| |||||| || ||||||||||||||||||||||||||||||| || |||| |||| |||| ||||| || ||||||  ||||| |||||||||    
T  11803162 ttgtttggacgaaaggacaatccctgtggatacgatactctacttatcactttattactttgttaaa-gattggtacacttgccactaatttgaccatca 11803064  T
Q  234 ac 235  Q
    ||    
T  11803063 ac 11803062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 234
Target Start/End: Original strand, 14195990 - 14196087
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    ||||||| ||||||| ||||| | |||||||||| |||| |||||| || || |||||||||||||||| ||| || ||||||||||| ||||||||||    
T  14195990 ttgtttggacgaaacaataattcttgtggatacggtactttactta-cactttattatttgataaacgatttggtacacttgcctaatctgaccatcaa 14196087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 13759878 - 13759947
Alignment:
Q  138 tgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||| ||||||||| ||||| |||||||| |||||||||||||||| || |||| ||| |||||||||    
T  13759878 tgtttggacgaaacgacaatccttgtggatatgatactctacttatcactttattaattggtaaacgatt 13759947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 18662539 - 18662475
Alignment:
Q  118 aaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||||||| |||||||||   || ||||||||| ||||| |||||||||||||||||||||||||    
T  18662539 aaataagtaacgtgaattgtt---tggacgaaacgacaatccttgtggatacgatactctacttatca 18662475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 7492280 - 7492336
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcatta 193  Q
    ||||||| ||||||| | ||||| |||||||||||||||||||||||||||| ||||    
T  7492280 ttgtttgaacgaaacaacaatccttgtggatacgatactctacttatcattttatta 7492336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 18466077 - 18466017
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||| |||||||| |||||||||||||| || ||||||||||||| ||||    
T  18466077 gaaacgagaatccctatggatacgttactctacttatcactttattatttgataaatgatt 18466017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 10584487 - 10584573
Alignment:
Q  118 aaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||||||| ||||||||   | || ||||||| ||||| ||||||||||||||| | ||||||| || |||| |||||||||||||    
T  10584487 aaataagtaacacgaattgtt---tctatgaaacgacaatccatgtggatacgatactttgcttatcactttattacttgataaacgatt 10584573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 31743787 - 31743740
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    |||||||||||| |||||  ||||||||||||||||||||||||||||    
T  31743787 ggtttgtagggttagtcgacaatgcttaaagtcgtttgggatgttaca 31743740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 42515340 - 42515387
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||    
T  42515340 ggtttgtagggtcagtcggcaatgcttaaagtcgtctgtgatgttaca 42515387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 2563899 - 2563830
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||| || || |||| ||| |||||||||    
T  2563899 ttgtttggacgaaacgacaatccttgtggatacgatactctactta-cactttattacttggtaaacgatt 2563830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 5530103 - 5530037
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||| ||||||||| |||| ||||||||||||| || |||||||||||| |||| ||| |||||    
T  5530103 ttgtttggacgaaacgaaaatctctgtggatacgatgctttacttatcattttattacttggtaaac 5530037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 11221189 - 11221251
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||| ||||||||||||||| ||||||||||||||| || |||| ||  |||||||||    
T  11221189 acgaaacgacaatccctgtggatacaatactctacttatcaatttattacttagtaaacgatt 11221251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 13418615 - 13418533
Alignment:
Q  138 tgtttgtacgaaacgataatccctgtggatacgatactctacttatca-tttcattatttgataaacgattgctatacttgcc 219  Q
    |||||| |||||| || ||||||| ||||||||||||||||||||||| ||| |||| ||| | |||||||| || |||||||    
T  13418615 tgtttggacgaaaggacaatccctatggatacgatactctacttatcacttttattacttggttaacgattggtacacttgcc 13418533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 18368997 - 18369063
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||| ||||||||| ||||||| ||||||| ||||||||||||||| || |||| ||| |||||    
T  18368997 ttgtttggacgaaacgacaatccctatggatacaatactctacttatcactttattacttggtaaac 18369063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 31493012 - 31492942
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| || |||||| ||||| ||||||||||||||||||||||||| || ||||  || |||||||||    
T  31493012 ttgtttggacaaaacgacaatccatgtggatacgatactctacttatcactttattacctggtaaacgatt 31492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 3329675 - 3329740
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaa 202  Q
    ||||||| | ||||||| ||||| ||||||||||||||||||||||||| || |||| ||| ||||    
T  3329675 ttgtttggatgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaa 3329740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 5108647 - 5108602
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctactta 182  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  5108647 ttgtttggacgaaacgacaatccttgtggatacgatactctactta 5108602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 26957590 - 26957545
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgtta 78  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  26957590 ggtttgtagggccagtcggcaatgcttaaagtcgtctgggatgtta 26957545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 9731644 - 9731692
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||| ||||||||| ||||| ||||| |||||||||||||||||||    
T  9731644 ttgtttggacgaaacgacaatccttgtggttacgatactctacttatca 9731692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 10937674 - 10937614
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||| ||||||||||||||| ||||||||| || |||| ||| |||||||||    
T  10937674 gaaacgacaatccatgtggatacgatactatacttatcactttattacttggtaaacgatt 10937614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 207
Target Start/End: Complemental strand, 16365820 - 16365717
Alignment:
Q  102 ttatatcatcaacttaaaa-taagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgata 200  Q
    ||||||| ||||||||||| ||||||||  ||||||||   || || |||||| ||||| ||||||||||||||||||||| | | || |||| ||| ||    
T  16365820 ttatatcgtcaacttaaaaataagtaacgcgaattgtt---tgcacaaaacgacaatccatgtggatacgatactctactttttactttattacttggta 16365724  T
Q  201 aacgatt 207  Q
    |||||||    
T  16365723 aacgatt 16365717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 21912507 - 21912563
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||| |||||| || |||||||||||| |||||||| || ||||||||||||||    
T  21912507 gaaacgacaatccccgtagatacgatactcaacttatcactttattatttgataaac 21912563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 2611557 - 2611510
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  ||||||||||||||| ||| ||||||||    
T  2611557 ggtttgtagggtcagtcgacaatgcttaaagtcgtatggaatgttaca 2611510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 6747504 - 6747457
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||||    
T  6747504 ggtttgtagggtcagtcggcaatgcttaaagcagtctgggatgttaca 6747457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 6747974 - 6747927
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||| ||||||||||||||| || || ||||||    
T  6747974 ggtttgtagggtcagtcggcaatgcttaaagtcgtctgagaggttaca 6747927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 9864351 - 9864430
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||||||| ||||| |||||||| |||||||||||||||| || |||| ||| ||||| | ||| || |||||||||||    
T  9864351 acgaaacgacaatccttgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttgcctaat 9864430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 6013717 - 6013588
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcat 191  Q
    ||||| ||||||||||||||||  ||||||||||||    |||||||   || |  ||| || ||||| ||||||||||||||||||||||||| || |     
T  6013717 ctcttttattttatatcatcaaactaaaataagtaaagccaattgtt---tggataaaatgagaatccttgtggatacgatactctacttatcacttaag 6013621  T
Q  192 tatttgataaacga-ttgctatacttgcctaat 223  Q
    || |||||||| || ||| || |||||||||||    
T  6013620 tacttgataaatgatttggtacacttgcctaat 6013588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 6042542 - 6042473
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| || | ||||||||||||||||||||||| ||||| ||||  || |||||||||    
T  6042542 ttgtttgaacgaaacgacaacctctgtggatacgatactctactta-cattttattacatggtaaacgatt 6042473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 8979023 - 8979093
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||| | ||||| |||||||| |||||||||||||||| || |||| ||| |||| ||||    
T  8979023 ttgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttggtaaatgatt 8979093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 17203105 - 17203059
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttat 183  Q
    ||||||| ||||||||| |||||| ||| ||||||||||||||||||    
T  17203105 ttgtttggacgaaacgacaatccccgtgaatacgatactctacttat 17203059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 1872885 - 1872817
Alignment:
Q  116 taaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatt 187  Q
    |||||||||||||| ||||||||   |||| ||||||| ||    |||||||||||||||||||||||||||    
T  1872885 taaaataagtaacacgaattgtt---tgtatgaaacgacaacttatgtggatacgatactctacttatcatt 1872817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 3191042 - 3191146
Alignment:
Q  100 ttttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgat 199  Q
    ||||||||| |||||||||||||| ||||| |||   ||||||| ||||||||| ||||||| | ||||  ||||| ||||| ||| || |||| |  ||    
T  3191042 ttttatatcctcaacttaaaataaataacacgaa---ttgtttggacgaaacgacaatccctatagatataatactttacttttcactttattactaaat 3191138  T
Q  200 aaacgatt 207  Q
    ||||||||    
T  3191139 aaacgatt 3191146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 9078236 - 9078203
Alignment:
Q  149 aacgataatccctgtggatacgatactctactta 182  Q
    ||||||||||||||||||||||||| ||||||||    
T  9078236 aacgataatccctgtggatacgataatctactta 9078203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 15869659 - 15869590
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||| || |||||||||||||||||||||| || |||| ||| ||||||| ||| || |||||||||||    
T  15869659 aatccttgcggatacgatactctacttatcactttattacttggtaaacgatttgatacacttgcctaat 15869590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 15869724 - 15869683
Alignment:
Q  87 cttatctcttgtattttatatcatcaacttaaaataagtaac 128  Q
    ||||||| || ||||||||||| |||||||||||||||||||    
T  15869724 cttatctattttattttatatcgtcaacttaaaataagtaac 15869683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 16059038 - 16059083
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctactta 182  Q
    ||||||| |||||| || ||||| ||||||||||||||||||||||    
T  16059038 ttgtttggacgaaaggacaatccatgtggatacgatactctactta 16059083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 18661655 - 18661602
Alignment:
Q  154 taatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||| ||||||||| ||||||||||||||| || ||| |||| |||||||||    
T  18661655 taatccttgtggatacaatactctacttatcactttattgtttggtaaacgatt 18661602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 1848244 - 1848292
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||| |||||| || |||||| |||||||||||||| |||||||||    
T  1848244 ttgtttggacgaaaggacaatcccagtggatacgatactgtacttatca 1848292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 2953628 - 2953585
Alignment:
Q  163 tggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||||||||||||||| || || ||||||||||||||||||    
T  2953628 tggatacgatactctactta-cactttattatttgataaacgatt 2953585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 8054085 - 8054145
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||| | |||||||||||||||||| |||||| || |||| ||| |||||||||    
T  8054085 gaaacgacaattcatgtggatacgatactctaattatcactttattacttggtaaacgatt 8054145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 12391257 - 12391201
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||| ||| |||||| |||||| ||||| ||||||| || ||||||||||||||    
T  12391257 gaaacgacaattcctgtgaatacgacactcttcttatcactttattatttgataaac 12391201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 16306766 - 16306706
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||| |||||||| ||| ||||||||||||||||||||| || |||| ||| |||| ||||    
T  16306766 gaaatgataatccttgtagatacgatactctacttatcactttattacttgttaaaggatt 16306706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 233
Target Start/End: Original strand, 168263 - 168412
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| ||||| |||| ||||||||||| |||||||||||||||||||| ||   | | |||  | ||||||| ||||| ||||||||||||||||||||    
T  168263 ctaacccttatgtcttttattttatatcgtcaacttaaaataagtaacacga---gctatttagaagaaacgacaatcc-tgtggatacgatactctact 168358  T
Q  181 tatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatca 233  Q
    ||||| || |||| ||| ||||||| ||| || ||||||||||| |||||||||    
T  168359 tatcactttattacttggtaaacgatttggtacacttgcctaatctgaccatca 168412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 231
Target Start/End: Complemental strand, 864 - 715
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacat-gaattgttgtttgtacgaaacgataatccctgtggatacgatactctac 179  Q
    ||||| |||| ||||| ||||||||||| ||||||||||||||||||| | | ||||||   || ||||||||| ||||| ||| ||||| |||||||||    
T  864 ctaacccttaactcttttattttatatcttcaacttaaaataagtaacgtcggattgtt---tggacgaaacgacaatccttgttgatacaatactctac 768  T
Q  180 ttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccat 231  Q
    |||||| || |||| ||| ||||||| ||| || ||||||||||| |||||||    
T  767 ttatcactttattacttggtaaacgatttggtacacttgcctaatctgaccat 715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 207
Target Start/End: Complemental strand, 22664342 - 22664218
Alignment:
Q  80 actaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctac 179  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||| |||  ||   |||||||  |||||| || |||||| ||||||| ||||||||||    
T  22664342 actaacccttatctcttttattttatatcgtcaacttaaaataagcaacgcga---gttgtttagacgaaatgaaaatcccagtggataagatactctac 22664246  T
Q  180 ttatcatttcattatttgataaacgatt 207  Q
    |||||| || |||| ||| |||||||||    
T  22664245 ttatcactttattacttggtaaacgatt 22664218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 33190795 - 33190689
Alignment:
Q  98 tattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttg 197  Q
    ||||||||||| |||||||||||||||||||| ||   |||||||  | ||||||| |||   ||||||||  |||||||||||||||||| |||| |||    
T  33190795 tattttatatcgtcaacttaaaataagtaacacga---gttgtttagatgaaacgacaattgttgtggatattatactctacttatcattttattacttg 33190699  T
Q  198 ataaacgatt 207  Q
    ||||||||||    
T  33190698 ataaacgatt 33190689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 18736257 - 18736327
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||||||| || |||| ||| |||||||||    
T  18736257 ttgtttgaacgaaacgacaatccctgtggatacgatacactacttatcactttattacttgttaaacgatt 18736327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 17610256 - 17610343
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||||||| |||||||||   || ||||||||| ||||| ||||||||||||||||||||||| | || |||| ||| |||||||||    
T  17610256 aaaataagtaacgtgaattgtt---tggacgaaacgacaatccatgtggatacgatactctacttataactttattacttggtaaacgatt 17610343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 21449188 - 21449101
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||||||||| |||||||   ||  |||||||| ||||| ||||||||||||||||||||||||| || |||| ||| |||||||||    
T  21449188 aaaataagtaacataaattgtt---tggccgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaacgatt 21449101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 9787843 - 9787983
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| ||| |||||| ||||||||||||| ||||||||||||||||   ||   |||||||  ||||||||| |||   | ||||||||||||||||||    
T  9787843 ctaacccttttctcttctattttatatcataaacttaaaataagtaattgga---gttgtttagacgaaacgacaatttatatggatacgatactctact 9787939  T
Q  181 tatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    ||||| || |||| ||| |||| || ||| || |||||||||||    
T  9787940 tatcactttattacttgctaaatgatttggtacacttgcctaat 9787983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 21847715 - 21847619
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatca 233  Q
    ||||||| ||||||||| ||||| ||||||||| ||||||||||||  | || |||| ||| ||||||| ||| || |||||||||||||||||||||    
T  21847715 ttgtttggacgaaacgacaatccatgtggatacaatactctactta-gactttattacttggtaaacgatttggtacacttgcctaatatgaccatca 21847619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 15543966 - 15544053
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||||||| ||||||||   || ||||||||| |||  | |||||||||||||||||||||||| || |||| ||| |||||||||    
T  15543966 aaaataagtaacacgaattgtt---tggacgaaacgacaatttccgtggatacgatactctacttatcactttattacttggtaaacgatt 15544053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 16179128 - 16179019
Alignment:
Q  98 tattttatatcatcaactta---aaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattat 194  Q
    ||||||||||| ||||||||   |||||||||||| ||||||||   || |||||||||   ||| | ||||||||||||||||||||||| || ||||     
T  16179128 tattttatatcgtcaacttacaaaaataagtaacaagaattgtt---tggacgaaacgactttccttttggatacgatactctacttatcagtttattac 16179032  T
Q  195 ttgataaacgatt 207  Q
    ||| |||||||||    
T  16179031 ttgttaaacgatt 16179019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 23037984 - 23038115
Alignment:
Q  88 ttatctcttgtattttatatcatcaa-cttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcat 186  Q
    ||||||||| ||||||||  |||||| |||||||||||||||  ||   |||||||  ||||||||| ||||| |||||||||||||||| ||||||||     
T  23037984 ttatctcttttattttat--catcaaacttaaaataagtaacgaga---gttgttttgacgaaacgacaatccatgtggatacgatactc-acttatcac 23038077  T
Q  187 ttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    || |||| ||| ||||||| ||| || |||||||||||    
T  23038078 tttattacttggtaaacgatttggtacacttgcctaat 23038115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 205
Target Start/End: Original strand, 25405610 - 25405715
Alignment:
Q  100 ttttatatcatcaactta---aaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattattt 196  Q
    ||||||||| ||||||||   ||||||||||| |||| ||||   || ||||||||| ||||| ||||||||||||||| ||||||||| || |||| ||    
T  25405610 ttttatatcgtcaacttacaaaaataagtaacgtgaactgtt---tggacgaaacgacaatccttgtggatacgatactttacttatcactttattactt 25405706  T
Q  197 gataaacga 205  Q
    | |||||||    
T  25405707 ggtaaacga 25405715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 26648987 - 26649057
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||| ||||||||||||||| ||||||||| ||| || ||||||||||| |||| ||| |||||||||    
T  26648987 gttgtttggacgaaacgataatccatgtggatacaatattc-acttatcattttattacttggtaaacgatt 26649057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 39582589 - 39582636
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    |||||||||| |||||||| |||||||||||| |||||||||||||||    
T  39582589 ggtttgtaggatcagtcggcaatgcttaaagtagtttgggatgttaca 39582636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 3591670 - 3591740
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| || |||||| ||||  |||||||||||||||||| |||||| || |||| |||||||||||||    
T  3591670 ttgtttggacaaaacgacaatctatgtggatacgatactctatttatcactttattacttgataaacgatt 3591740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 12208683 - 12208613
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| ||||| |||||||| |||| ||||||||||| || |||| ||| |||||||||    
T  12208683 ttgtttggacgaaacgacaatccatgtggatatgatattctacttatcactttattacttggtaaacgatt 12208613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 24306340 - 24306390
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaacga 205  Q
    ||||||||||||||||||||||||||||||| || |||| ||| |||||||    
T  24306340 aatccctgtggatacgatactctacttatcactttattacttggtaaacga 24306390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 29242601 - 29242535
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||| | ||||||| |||| || ||||||||||||||||||||||| || |||| |||||||||    
T  29242601 ttgtttggatgaaacgacaatcactatggatacgatactctacttatcactttattacttgataaac 29242535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 35009905 - 35009859
Alignment:
Q  34 gtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||    
T  35009905 gtttgtagggtcagtcggcaatgctcaaagtcgtctgggatgttaca 35009859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 207
Target Start/End: Complemental strand, 24281401 - 24281289
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcat 191  Q
    ||||| ||||||||||  |||||||||||||||||||   |||||||    | |  |||||||||||| |||||||| |||| ||||||||||| || ||    
T  24281401 ctcttttattttatattgtcaacttaaaataagtaacgcaaattgttc---ggaaaaaacgataatccatgtggatatgataatctacttatcactttat 24281305  T
Q  192 tatttgataaacgatt 207  Q
    || ||| |||||||||    
T  24281304 tacttggtaaacgatt 24281289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 28008229 - 28008184
Alignment:
Q  92 ctcttgtattttatatcatcaacttaaaataagtaacatgaattgt 137  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||    
T  28008229 ctcttttattttatatcgtcaacttaaaataagtaacacgaattgt 28008184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 15813143 - 15813269
Alignment:
Q  105 tatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacg 204  Q
    |||| |||| ||||||||||||||  ||   |||||||| ||| ||||| ||||| ||||||||||||| || |||||||| || ||||  |||||||||    
T  15813143 tatcgtcaaattaaaataagtaacgaga---gttgtttggacgcaacgaaaatccttgtggatacgatagtc-acttatcactttattacatgataaacg 15813238  T
Q  205 a-ttgctatacttgcctaatatgaccatcaa 234  Q
    | ||| || |||||||||||  |||||||||    
T  15813239 atttggtacacttgcctaatccgaccatcaa 15813269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 15813517 - 15813612
Alignment:
Q  110 tcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctac-ttatcatttcattatttgataaacgatt 207  Q
    |||||| ||||||||||||| ||||||||   |  | ||||||| ||||| ||||||||| ||||||||| |||||| || ||| ||||||||||||||    
T  15813517 tcaactaaaaataagtaacacgaattgtt---tcaaagaaacgacaatccttgtggatacaatactctactttatcactttattttttgataaacgatt 15813612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 21666625 - 21666673
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||| |||||| || ||||| |||||||||||||||||||||||||    
T  21666625 ttgtttggacgaaaggacaatccatgtggatacgatactctacttatca 21666673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 14779646 - 14779599
Alignment:
Q  138 tgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    |||||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  14779646 tgtttggacgaaacgacaatccctgtggatatgatactctaattatca 14779599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 16787754 - 16787813
Alignment:
Q  148 aaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||| ||||  |||| |||||||||||||||||||| || |||| |||||||||||||    
T  16787754 aaacgacaatctatgtgaatacgatactctacttatcactttattacttgataaacgatt 16787813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 13345353 - 13345419
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||||| || |||||| ||||| |||||||| |||||||||||||||| || |||| ||| |||||    
T  13345353 ttgtttggacaaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaac 13345419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 24214667 - 24214558
Alignment:
Q  93 tcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcatt 192  Q
    |||| ||||||||||| || |||||||||||||||| | |   |||||||  ||||||| | ||||| |||||||||  |||| ||||||||| || |||    
T  24214667 tcttttattttatatcgtccacttaaaataagtaacgtaa---gttgtttagacgaaacaacaatccatgtggatacagtactgtacttatcactttatt 24214571  T
Q  193 atttgataaacga 205  Q
    | ||| |||||||    
T  24214570 acttggtaaacga 24214558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 9401587 - 9401542
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctactta 182  Q
    ||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  9401587 ttgtttggacgaaacgacaattcatgtggatacgatactctactta 9401542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 16916958 - 16916995
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctactta 182  Q
    |||||| || ||||||||||||||||||||||||||||    
T  16916958 acgaaaggacaatccctgtggatacgatactctactta 16916995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 12012828 - 12012904
Alignment:
Q  148 aaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaat 223  Q
    |||||| ||| | ||||||||| ||||||||||||||| || | || ||||||||||| ||| || |||||||||||    
T  12012828 aaacgacaattcatgtggatacaatactctacttatcactttaatacttgataaacgatttgatacacttgcctaat 12012904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 16359928 - 16359853
Alignment:
Q  161 tgtggatacgatactctacttatcatttcattatttgataaacgatt-gctatacttgcctaatatgaccatcaact 236  Q
    ||||||||| ||||| |||||| ||||| |||| ||| ||||||||| | || ||||||||||| ||||||||||||    
T  16359928 tgtggatacaatactatactta-cattttattacttggtaaacgatttggtacacttgcctaatctgaccatcaact 16359853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 27117745 - 27117833
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    ||||||| ||| | |||| |||| ||||||||||||||| || |||| ||| ||||||| ||| || |||||||||||  |||||||||    
T  27117745 gaaacgacaattcatgtgaatacaatactctacttatcactttattacttggtaaacgatttggtaaacttgcctaatccgaccatcaa 27117833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 51473893 - 51473941
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||| || |||||| ||||| | |||||||||||||||||||||||    
T  51473893 ttgtttggacaaaacgacaatccatatggatacgatactctacttatca 51473941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 15375902 - 15375969
Alignment:
Q  140 tttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  15375902 tttggacgaaacgacaatccctgtggataggatactctacttatcattttattatttggtaaacgatt 15375969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 234
Target Start/End: Complemental strand, 18937865 - 18937732
Alignment:
Q  98 tattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttg 197  Q
    ||||||||||||| ||||||||||||||||| ||||   ||||||| ||||||| | ||||||| || |||||||||| ||||||||| || |||| ||     
T  18937865 tattttatatcattaacttaaaataagtaacgtgaa---ttgtttggacgaaacaacaatccctctgaatacgatact-tacttatcactttattactta 18937770  T
Q  198 ataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    |||||||| ||| || |||||||||||  |||||||||    
T  18937769 ataaacgatttggtacacttgcctaatccgaccatcaa 18937732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 18208219 - 18208363
Alignment:
Q  87 cttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcat 186  Q
    |||| ||||| ||||||||||||||||   |||||||||||||||||   ||||||| |||||| || ||||| |||||||||||||||||||||| ||     
T  18208219 cttaactcttttattttatatcatcaaaacaaaataagtaacatgaa---ttgtttggacgaaaggacaatccatgtggatacgatactctactta-cac 18208314  T
Q  187 ttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    || |||| ||  ||||||| ||| || |||||||||||  |||||||||    
T  18208315 tttattactttgtaaacgatttggtacacttgcctaatccgaccatcaa 18208363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 223
Target Start/End: Original strand, 25550487 - 25550608
Alignment:
Q  102 ttatatcatcaactta--aaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgat 199  Q
    ||||||| ||||||||  |||||||||||| ||||||||   || |||||| || |||||||||||||| |||||||||||||||| || |||| ||| |    
T  25550487 ttatatcgtcaacttacaaaataagtaacaagaattgtt---tggacgaaatgacaatccctgtggatatgatactctacttatcactttattacttggt 25550583  T
Q  200 aaacga-ttgctatacttgcctaat 223  Q
    |||||| ||| || |||||||||||    
T  25550584 aaacgatttgatacacttgcctaat 25550608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 20315447 - 20315529
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgattgctatacttgcc 219  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||||  | |||| ||| |||||||||| || |||||||    
T  20315447 ttgtttggacgaaaggataatccatgtggatacgatactctacttatcacattattacttggtaaacgattggtacacttgcc 20315529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 19283819 - 19283942
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||| ||||| || |||||||| |||||||||||||||| |    |||||||   || |||||||| |||| | ||||||||| ||||||||||    
T  19283819 ctaacccttaactcttttactttatatcgtcaacttaaaataagttaagcaaattgtt---tggacgaaacgttaattcttgtggatacaatactctact 19283915  T
Q  181 tatcatttcattatttgataaacgatt 207  Q
    ||||| || |||||||| |||||||||    
T  19283916 tatcactttattatttggtaaacgatt 19283942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 24140524 - 24140442
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgattgctatacttgcc 219  Q
    ||||||| |||||| || |||||| |||||||| ||||||||||||||| || |||| ||| |||||||||| || |||||||    
T  24140524 ttgtttggacgaaaggacaatcccagtggatacaatactctacttatcactttattacttggtaaacgattggtacacttgcc 24140442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 24245560 - 24245609
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  24245560 gttgtttggacgaaacgacaatccttgtggatacgatactctacttatca 24245609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 24266918 - 24267069
Alignment:
Q  81 ctaactcttatctcttgtatt-ttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctac 179  Q
    ||||| |||| ||||| |||| ||||||| ||||   ||||||||||||| ||||||||   || || ||| |||||||| |||||||||||||||||||    
T  24266918 ctaacccttaactcttttattattatatcgtcaaaacaaaataagtaacacgaattgtt---tggacaaaatgataatccttgtggatacgatactctac 24267014  T
Q  180 ttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    ||| || || |||| ||| ||||||| ||| || |||||||||||  |||||||||    
T  24267015 tta-cactttattacttggtaaacgatttggtacacttgcctaattcgaccatcaa 24267069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 24343549 - 24343700
Alignment:
Q  81 ctaactcttatctcttgtatt-ttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctac 179  Q
    ||||| |||| ||||| |||| ||||||| ||||   ||||||||||||| ||||||||   || || ||| |||||||| |||||||||||||||||||    
T  24343549 ctaacccttaactcttttattattatatcgtcaaaacaaaataagtaacacgaattgtt---tggacaaaatgataatccttgtggatacgatactctac 24343645  T
Q  180 ttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    ||| || || |||| ||| ||||||| ||| || |||||||||||  |||||||||    
T  24343646 tta-cactttattacttggtaaacgatttggtacacttgcctaattcgaccatcaa 24343700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 17185535 - 17185475
Alignment:
Q  147 gaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| ||||||||||||||||||||| || |||||||| |||| ||||    
T  17185535 gaaacgacaatccctgtagatacgatactctacttatcactttattatttggtaaatgatt 17185475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 39147180 - 39147227
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  39147180 ggtttgtagggtcaatcggcaatgcttaaagtcgtctgggatgttaca 39147227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 17171578 - 17171640
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||| ||||| |||||||||||| |||||||||||| || |||| |||||||| ||||    
T  17171578 acgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataaaagatt 17171640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 22755603 - 22755533
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| | ||||||| ||||| | ||||||||||||||||||||||  ||||||| ||| |||||||||    
T  22755603 ttgtttggaagaaacgacaatccttatggatacgatactctacttatctcttcattacttggtaaacgatt 22755533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 19004226 - 19004313
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||||||| |||||||||   || || ||| || ||||| |||||||||||||||| |||||||| || |||| ||| |||||||||    
T  19004226 aaaataagtaacgtgaattgtt---tggacaaaatgacaatccatgtggatacgatactccacttatcactttattacttggtaaacgatt 19004313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 25402362 - 25402402
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  25402362 acgaaacgacaatccctgtggatacaatactctacttatca 25402402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 17431966 - 17431895
Alignment:
Q  136 gttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||||| | ||||||| |||| ||||||||||||||||||||||  || || |||| ||| |||||||||    
T  17431966 gttgtttggatgaaacgacaatctctgtggatacgatactctactttccactttattacttggtaaacgatt 17431895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 20549704 - 20549766
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctactta 182  Q
    ||||||||||||| ||||||||    | |||||| || ||||||||||||||||||||||||||||    
T  20549704 aaaataagtaacaagaattgttc---ggacgaaaggacaatccctgtggatacgatactctactta 20549766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 24852173 - 24852259
Alignment:
Q  118 aaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||||||| |||||||||   |  ||||||| | ||||| ||||||||||||||| |||||||||||| |||| ||| ||| |||||    
T  24852173 aaataagtaacgtgaattgtt---tagacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaatcgatt 24852259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 26110497 - 26110575
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaacgatt-gctatacttgcctaatatgaccatca 233  Q
    ||||||||||||||  |||||||||||| ||||| |||| ||||||||||||| | || |||||||||||  ||||||||    
T  26110497 aatccctgtggatattatactctactta-cattttattacttgataaacgattcggtacacttgcctaatccgaccatca 26110575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 26121359 - 26121437
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatca 233  Q
    ||||||||||||||| |||||||||||| ||||| |||| ||| ||||||| ||| || |||||||||||  ||||||||    
T  26121359 aatccctgtggatactatactctactta-cattttattacttgctaaacgatttggtacacttgcctaatccgaccatca 26121437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 29680005 - 29679959
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  29680005 ggtttgtagggtcagtcggcaatgcttaaagtcgtct-ggatgttaca 29679959  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 34128715 - 34128636
Alignment:
Q  140 tttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgattgctatacttgcc 219  Q
    |||| |||||| || ||| ||||||||||||||| ||||||||||| || |||| ||| | |||||||| || |||||||    
T  34128715 tttggacgaaaggacaattcctgtggatacgatattctacttatcactttattacttggtcaacgattggtacacttgcc 34128636  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 23388838 - 23388903
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||||||||| ||||||||    | |||||| || ||||| |||||||||||||||||||||||||    
T  23388838 aaaataagtaacaagaattgttc---ggacgaaaggacaatccatgtggatacgatactctacttatca 23388903  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 20858742 - 20858705
Alignment:
Q  162 gtggatacgatactctacttatcatttcattatttgat 199  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  20858742 gtggatacgatactctacttatcattttattacttgat 20858705  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 1822154 - 1822202
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttacac 81  Q
    ||||||||||||| |||   ||||||||||||||| |||||||||||||    
T  1822154 ggtttgtagggtcggtcaacaatgcttaaagtcgtctgggatgttacac 1822202  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 36175217 - 36175173
Alignment:
Q  135 tgttgtttgtacgaaacgataatccctgtggatacgatactctac 179  Q
    ||||||||| ||||||||| ||||| | |||||||||||||||||    
T  36175217 tgttgtttggacgaaacgacaatccttatggatacgatactctac 36175173  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 39434544 - 39434464
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgattgctatacttg 217  Q
    ||||||| || ||| || ||||| ||||||||||||  ||||||||||| || |||| ||| |||||||||| || |||||    
T  39434544 ttgtttggacaaaaggacaatccatgtggatacgattttctacttatcaatttattacttggtaaacgattggtacacttg 39434464  T

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Target: scaffold0062 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 43191 - 43307
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    ||||| |||||||||| ||||||||||| |||| ||||||||||||||| ||   | |||||  ||||||||| ||||| |||||||||| |||| ||||    
T  43191 ctaacccttatctcttttattttatatcgtcaatttaaaataagtaacacga---gctgtttagacgaaacgacaatccttgtggatacgttactttact 43287  T
Q  181 tatcatttcattatttgata 200  Q
    ||||| || |||| ||||||    
T  43288 tatcactttattacttgata 43307  T

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Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 35619 - 35549
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||||| ||||||||| ||||| ||||||||| |||||||| |||||| || |||| |||||||||||||    
T  35619 ttgtttggacgaaacgaaaatccatgtggatacaatactctatttatcactttattacttgataaacgatt 35549  T

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Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 202
Target Start/End: Complemental strand, 39720 - 39601
Alignment:
Q  81 ctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctact 180  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||||  ||| |  || |||| || |||| | ||||  |||||||||||| |||||||    
T  39720 ctaattcttatctcttttattttatatcgtcaacttaaaataagtaaagtgagt--ttttttggacaaaacaacaatcaatgtggatacgatgctctact 39623  T
Q  181 tatcatttcattatttgataaa 202  Q
    ||||| || |||| ||| ||||    
T  39622 tatcactttattacttggtaaa 39601  T

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Target: scaffold0333 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 5268 - 5315
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  5268 ggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 5315  T

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Target: scaffold0333; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 4808 - 4855
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttaca 80  Q
    ||||||||||||||||||  ||||||||||||||  ||||||||||||    
T  4808 ggtttgtagggtcagtcgacaatgcttaaagtcgactgggatgttaca 4855  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 54931 - 54872
Alignment:
Q  148 aaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    |||||| ||||||||||||||| ||||||||||||||| || |||| ||| |||||||||    
T  54931 aaacgacaatccctgtggatacaatactctacttatcactttattacttggtaaacgatt 54872  T

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Target: scaffold0650 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 6369 - 6271
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacga-ttgctatacttgcctaatatgaccatcaa 234  Q
    ||||||| ||||||| | ||||| ||||||||||||||| ||||||| | || |||| ||  ||||||| ||| || |||||||||||||||| |||||    
T  6369 ttgtttggacgaaacaacaatccatgtggatacgatactttacttatgactttattacttcgtaaacgatttgatacacttgcctaatatgactatcaa 6271  T

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Target: scaffold0838 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 2434 - 2382
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||| ||||||||||||||||||||||||  || |||||||| |||||||||    
T  2434 aatccatgtggatacgatactctacttatccctttattatttggtaaacgatt 2382  T

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Target: scaffold0832 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 2465 - 2413
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaacgatt 207  Q
    ||||| ||||||||||||||||||||||||  || |||||||| |||||||||    
T  2465 aatccatgtggatacgatactctacttatccctttattatttggtaaacgatt 2413  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 246685 - 246637
Alignment:
Q  33 ggtttgtagggtcagtcggtaatgcttaaagtcgtttgggatgttacac 81  Q
    ||||||||| ||| ||||| ||||||||||||||| |||||||||||||    
T  246685 ggtttgtagtgtctgtcggcaatgcttaaagtcgtctgggatgttacac 246637  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 35990 - 36060
Alignment:
Q  112 aacttaaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    |||||||||||||||||| ||||| ||   || | ||||||| ||| | |||||||||||||||||||||||||    
T  35990 aacttaaaataagtaacacgaattatt---tggatgaaacgacaattcatgtggatacgatactctacttatca 36060  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 3630 - 3565
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||||||||| ||||||||    | |||||| || ||||| |||||||||||||||||||||||||    
T  3630 aaaataagtaacaagaattgttc---ggacgaaaggacaatccatgtggatacgatactctacttatca 3565  T

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Target: scaffold1869 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 406 - 475
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgat 206  Q
    ||||||| |||||| || ||||||||| ||||||||||||||| ||||| || |||| ||  ||||||||    
T  406 ttgtttggacgaaatgacaatccctgttgatacgatactctacgtatcactttattactttgtaaacgat 475  T

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Target: scaffold0672 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 1805 - 1768
Alignment:
Q  148 aaacgataatccctgtggatacgatactctacttatca 185  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  1805 aaacgacaattcctgtggatacgatactctacttatca 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 21350 - 21277
Alignment:
Q  145 acgaaacgataatccctgtggatacgatactctacttatcatttcattatttgataaacgattgctatacttgc 218  Q
    |||||| || |||||||||||||| |||||||||||||||| || |||| ||  | |||||||| || ||||||    
T  21350 acgaaaggacaatccctgtggatatgatactctacttatcactttattactttgttaacgattggtacacttgc 21277  T

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Target: scaffold0638 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 840 - 888
Alignment:
Q  137 ttgtttgtacgaaacgataatccctgtggatacgatactctacttatca 185  Q
    ||||||| ||||||||| |||| |  |||||||||||||||||||||||    
T  840 ttgtttggacgaaacgacaatctcaatggatacgatactctacttatca 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 2818 - 2881
Alignment:
Q  117 aaaataagtaacatgaattgttgtttgtacgaaacgataatccctgtggatacgatactctacttat 183  Q
    ||||||||||||| ||||||||   || ||||||||| ||| | |||||||||||||||| ||||||    
T  2818 aaaataagtaacacgaattgtt---tggacgaaacgacaattcatgtggatacgatactcaacttat 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 11304 - 11256
Alignment:
Q  155 aatccctgtggatacgatactctacttatcatttcattatttgataaac 203  Q
    ||||| ||| |||| |||||||||||||||| || ||||||||||||||    
T  11304 aatccatgtagatatgatactctacttatcactttattatttgataaac 11256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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