View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21515_low_20 (Length: 224)
Name: NF21515_low_20
Description: NF21515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21515_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 36726904 - 36726686
Alignment:
| Q |
1 |
cttctttgcatcgtcttcttctctttagattcattcatgcgccttgatgaccttaacatttcttccatcctaggtggtttgattttcctttgggaatctc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
36726904 |
cttctttgcatcgtcttcttctctttagattcattcatgcgccttgatgaccttaacatttcttccatcctaggtggtttg-ttttcctttgggaatctc |
36726806 |
T |
|
| Q |
101 |
caacattctcactcaagcaaagcatatttgtcaccctaacatatttttc----taccaccaatcacacaacctcccctcttccaacaaaggatcaagcca |
196 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||||||||||||||| |
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| T |
36726805 |
caacattctcactcaagcaaagcatatttgtcaccctaacatatttttctacgtaccaccaattacacaatctctcctcttccaacaaaggatcaagcca |
36726706 |
T |
|
| Q |
197 |
aaaatatgtatcagtattat |
216 |
Q |
| |
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||||||||||||| |||||| |
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| T |
36726705 |
aaaatatgtatcattattat |
36726686 |
T |
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