View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21516_low_17 (Length: 296)
Name: NF21516_low_17
Description: NF21516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21516_low_17 |
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Alignment Details
Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 126 - 241
Target Start/End: Original strand, 30268405 - 30268521
Alignment:
| Q |
126 |
tttcaaagattacttaagctacattgtctttctttcagtatgcattaaccctaaatcaaaacaaacaaattaact-atnnnnnnnttcaaaatttcatag |
224 |
Q |
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| T |
30268405 |
tttcaaagattacttaagctacattgtttttccttcagtatgcattaaccctaaaccaaaacaaacaaattaactaaaaaaaaaaatcaaaatttcatag |
30268504 |
T |
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| Q |
225 |
attacttaacccacaag |
241 |
Q |
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||||||||||||||||| |
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| T |
30268505 |
attacttaacccacaag |
30268521 |
T |
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