View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21517_high_7 (Length: 279)
Name: NF21517_high_7
Description: NF21517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21517_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 18 - 264
Target Start/End: Original strand, 39413064 - 39413310
Alignment:
| Q |
18 |
gttccttaataaattgccagtggaatttgtggaggaagggaaaaataacaagttagaaagtgatttgaatggtgttgatgattcatcacaaagcattgag |
117 |
Q |
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| T |
39413064 |
gttccttaataaattgccagtggaatttgtggaggaagggaaaaataacaagttagaaagtgatttgaatggtgttgatgattcatcacaaagcattgag |
39413163 |
T |
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| Q |
118 |
gaaatactgtccataattcaagaggcaaggaaaccagttgagggcccaaaaattgatagtcaatttgttggaggagaaatggattttgatgagatggatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39413164 |
gaaatactgtccataattcaagaggcaaggaaaccagttgagggcccaaaaattgatagtcaatttgttggaggagaaatggattttgatgagatggatg |
39413263 |
T |
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| Q |
218 |
cagatgatgattttgataatgatatagaaactagtgacgattttgat |
264 |
Q |
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| T |
39413264 |
cagatgatgattttgataatgatatagaaactagtgacgattttgat |
39413310 |
T |
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