View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21517_low_4 (Length: 406)

Name: NF21517_low_4
Description: NF21517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21517_low_4
NF21517_low_4
[»] chr4 (47 HSPs)
chr4 (1-257)||(2713797-2714054)
chr4 (313-406)||(2713649-2713742)
chr4 (125-257)||(31876787-31876920)
chr4 (126-257)||(25370346-25370478)
chr4 (137-257)||(28223574-28223695)
chr4 (125-257)||(33569719-33569852)
chr4 (126-257)||(48091049-48091181)
chr4 (124-257)||(12639963-12640097)
chr4 (137-257)||(20075536-20075657)
chr4 (126-257)||(20422685-20422817)
chr4 (126-256)||(388753-388884)
chr4 (127-257)||(26424358-26424489)
chr4 (126-256)||(36944610-36944741)
chr4 (137-257)||(389359-389480)
chr4 (137-257)||(52597501-52597622)
chr4 (126-257)||(32291015-32291147)
chr4 (126-257)||(37567428-37567560)
chr4 (126-256)||(55815825-55815956)
chr4 (137-257)||(32902419-32902540)
chr4 (137-257)||(36945177-36945298)
chr4 (137-257)||(55816404-55816525)
chr4 (137-256)||(199010-199130)
chr4 (126-257)||(52597665-52597797)
chr4 (127-257)||(32901852-32901983)
chr4 (137-257)||(48782028-48782149)
chr4 (137-256)||(25369794-25369914)
chr4 (125-222)||(199216-199313)
chr4 (137-257)||(12640540-12640661)
chr4 (165-257)||(20076140-20076233)
chr4 (137-257)||(40345084-40345205)
chr4 (124-257)||(29809041-29809175)
chr4 (126-216)||(40847677-40847767)
chr4 (137-257)||(36111171-36111291)
chr4 (139-257)||(40344516-40344635)
chr4 (137-211)||(26423770-26423844)
chr4 (126-257)||(31842677-31842808)
chr4 (137-257)||(20422142-20422260)
chr4 (137-253)||(35427257-35427373)
chr4 (164-252)||(37566941-37567030)
chr4 (137-257)||(40848084-40848205)
chr4 (170-257)||(31877386-31877474)
chr4 (169-256)||(48781525-48781613)
chr4 (160-257)||(3708807-3708905)
chr4 (124-238)||(6862645-6862759)
chr4 (137-211)||(48090477-48090551)
chr4 (142-211)||(47328397-47328466)
chr4 (212-256)||(35427837-35427882)
[»] chr8 (35 HSPs)
chr8 (126-256)||(11999035-11999166)
chr8 (126-256)||(33114143-33114274)
chr8 (124-257)||(16889193-16889327)
chr8 (126-257)||(7818474-7818606)
chr8 (124-257)||(16879886-16880020)
chr8 (137-257)||(11998467-11998588)
chr8 (156-257)||(30115397-30115499)
chr8 (156-256)||(16889783-16889884)
chr8 (137-257)||(39852757-39852878)
chr8 (137-257)||(44061996-44062117)
chr8 (126-257)||(39852154-39852286)
chr8 (126-257)||(40309454-40309586)
chr8 (126-257)||(43591570-43591702)
chr8 (156-257)||(2209036-2209138)
chr8 (156-257)||(38778184-38778286)
chr8 (156-257)||(43481235-43481337)
chr8 (137-257)||(43591018-43591139)
chr8 (126-249)||(43480616-43480740)
chr8 (124-257)||(35237257-35237391)
chr8 (124-257)||(44062550-44062684)
chr8 (137-257)||(7819051-7819172)
chr8 (137-257)||(30115950-30116071)
chr8 (137-257)||(33113586-33113707)
chr8 (170-257)||(4374255-4374343)
chr8 (170-257)||(10805992-10806080)
chr8 (131-257)||(10806391-10806518)
chr8 (125-257)||(4374946-4375079)
chr8 (137-238)||(16880492-16880593)
chr8 (137-254)||(38778752-38778870)
chr8 (137-257)||(36848155-36848272)
chr8 (137-257)||(4373697-4373818)
chr8 (137-211)||(35237865-35237938)
chr8 (137-216)||(40907610-40907688)
chr8 (126-175)||(43434701-43434750)
chr8 (126-170)||(37532576-37532620)
[»] chr3 (46 HSPs)
chr3 (124-257)||(3944893-3945027)
chr3 (126-257)||(23584837-23584969)
chr3 (126-257)||(23599660-23599792)
chr3 (126-257)||(37373965-37374097)
chr3 (126-257)||(50687662-50687794)
chr3 (126-257)||(32672166-32672298)
chr3 (126-257)||(48219189-48219321)
chr3 (137-257)||(29342352-29342473)
chr3 (125-257)||(44868006-44868139)
chr3 (137-257)||(48218602-48218723)
chr3 (126-257)||(25025174-25025306)
chr3 (137-257)||(25025718-25025839)
chr3 (126-257)||(31014878-31015010)
chr3 (134-257)||(37375422-37375546)
chr3 (137-256)||(55281846-55281966)
chr3 (124-253)||(42356231-42356364)
chr3 (125-257)||(19555269-19555402)
chr3 (137-249)||(24220590-24220703)
chr3 (137-257)||(44868572-44868693)
chr3 (137-256)||(8427698-8427818)
chr3 (125-256)||(37374819-37374946)
chr3 (171-257)||(32672737-32672824)
chr3 (139-257)||(41875570-41875689)
chr3 (164-257)||(29342947-29343041)
chr3 (156-257)||(47737627-47737729)
chr3 (137-257)||(37374560-37374681)
chr3 (170-257)||(49752317-49752405)
chr3 (176-257)||(19555877-19555959)
chr3 (164-257)||(38575596-38575690)
chr3 (156-257)||(49752864-49752966)
chr3 (160-256)||(31014371-31014468)
chr3 (126-257)||(50675079-50675211)
chr3 (137-253)||(23584248-23584365)
chr3 (137-253)||(23599071-23599188)
chr3 (170-252)||(43658854-43658937)
chr3 (172-249)||(40887903-40887981)
chr3 (137-257)||(50674640-50674756)
chr3 (170-257)||(38575065-38575153)
chr3 (126-238)||(55282395-55282506)
chr3 (179-257)||(8427269-8427348)
chr3 (170-253)||(24221130-24221214)
chr3 (171-257)||(47737108-47737195)
chr3 (128-256)||(43103901-43104030)
chr3 (198-256)||(3945464-3945523)
chr3 (137-201)||(41459141-41459204)
chr3 (178-257)||(42356763-42356843)
[»] chr2 (35 HSPs)
chr2 (125-257)||(20244125-20244258)
chr2 (137-257)||(3595257-3595378)
chr2 (125-257)||(9224265-9224398)
chr2 (126-257)||(11256694-11256826)
chr2 (125-253)||(7583751-7583880)
chr2 (131-256)||(16903045-16903170)
chr2 (126-257)||(4386914-4387046)
chr2 (126-257)||(16571118-16571250)
chr2 (126-256)||(28223788-28223919)
chr2 (139-257)||(39477279-39477398)
chr2 (137-257)||(10883298-10883419)
chr2 (137-257)||(11256127-11256248)
chr2 (126-256)||(6849497-6849628)
chr2 (137-257)||(28224342-28224463)
chr2 (126-257)||(3595849-3595981)
chr2 (137-256)||(7583143-7583263)
chr2 (126-238)||(7716671-7716783)
chr2 (129-256)||(8113255-8113383)
chr2 (126-257)||(30161933-30162065)
chr2 (137-257)||(6849299-6849420)
chr2 (137-257)||(16887594-16887715)
chr2 (126-257)||(33847873-33848005)
chr2 (156-257)||(20243583-20243685)
chr2 (137-257)||(16571680-16571801)
chr2 (177-257)||(17918639-17918720)
chr2 (126-257)||(8963504-8963636)
chr2 (160-257)||(467139-467237)
chr2 (137-253)||(7717243-7717359)
chr2 (156-257)||(39476545-39476647)
chr2 (141-257)||(467295-467412)
chr2 (137-257)||(8112691-8112809)
chr2 (169-257)||(17918064-17918153)
chr2 (160-232)||(40165907-40165979)
chr2 (137-257)||(40166803-40166918)
chr2 (126-167)||(18949909-18949950)
[»] chr7 (29 HSPs)
chr7 (126-257)||(36682835-36682967)
chr7 (126-257)||(46732567-46732699)
chr7 (126-257)||(47813971-47814103)
chr7 (137-253)||(30711799-30711916)
chr7 (129-256)||(4895037-4895165)
chr7 (126-257)||(27855566-27855697)
chr7 (137-257)||(36683418-36683539)
chr7 (125-257)||(46815016-46815148)
chr7 (125-256)||(42455920-42456052)
chr7 (148-257)||(32499827-32499936)
chr7 (137-257)||(34853402-34853523)
chr7 (137-257)||(47814589-47814710)
chr7 (137-256)||(24043998-24044118)
chr7 (132-257)||(22276030-22276156)
chr7 (137-257)||(19816275-19816396)
chr7 (142-257)||(4894515-4894631)
chr7 (126-257)||(34853950-34854082)
chr7 (134-257)||(46814413-46814537)
chr7 (129-257)||(19816846-19816975)
chr7 (137-257)||(42456470-42456591)
chr7 (170-256)||(32499293-32499380)
chr7 (160-257)||(33806003-33806101)
chr7 (137-253)||(22275436-22275552)
chr7 (137-257)||(24323936-24324056)
chr7 (170-257)||(18520901-18520989)
chr7 (172-257)||(36620694-36620780)
chr7 (126-257)||(36620118-36620250)
chr7 (174-257)||(46012894-46012978)
chr7 (198-257)||(27856097-27856157)
[»] chr1 (31 HSPs)
chr1 (139-257)||(51248437-51248556)
chr1 (128-257)||(27816958-27817088)
chr1 (137-257)||(43368789-43368910)
chr1 (126-257)||(49534350-49534482)
chr1 (126-257)||(1403040-1403172)
chr1 (126-257)||(6288158-6288290)
chr1 (140-257)||(42839502-42839620)
chr1 (156-256)||(49533773-49533874)
chr1 (126-257)||(42838937-42839069)
chr1 (171-257)||(41563746-41563833)
chr1 (137-253)||(8560701-8560817)
chr1 (137-257)||(27797128-27797249)
chr1 (126-257)||(8560156-8560288)
chr1 (126-257)||(27797690-27797822)
chr1 (137-257)||(42839712-42839832)
chr1 (170-257)||(48843916-48844004)
chr1 (139-252)||(41563192-41563306)
chr1 (164-257)||(51247866-51247960)
chr1 (137-257)||(7219602-7219722)
chr1 (169-256)||(37725422-37725510)
chr1 (134-257)||(42840267-42840391)
chr1 (170-257)||(48369526-48369614)
chr1 (137-257)||(52859740-52859863)
chr1 (139-257)||(43368203-43368322)
chr1 (164-257)||(6287658-6287752)
chr1 (148-257)||(27934249-27934358)
chr1 (137-249)||(1403650-1403762)
chr1 (137-257)||(48843591-48843712)
chr1 (170-256)||(7219052-7219139)
chr1 (126-249)||(7782653-7782777)
chr1 (170-257)||(52859193-52859281)
[»] scaffold0007 (1 HSPs)
scaffold0007 (126-257)||(11266-11397)
[»] chr6 (15 HSPs)
chr6 (126-257)||(6032707-6032839)
chr6 (126-257)||(5523800-5523932)
chr6 (126-257)||(30611299-30611431)
chr6 (126-257)||(33668221-33668353)
chr6 (126-257)||(31723833-31723965)
chr6 (127-257)||(12809656-12809787)
chr6 (137-257)||(5523211-5523332)
chr6 (137-257)||(6032169-6032290)
chr6 (125-257)||(13936594-13936727)
chr6 (138-257)||(30610723-30610843)
chr6 (137-257)||(12809080-12809201)
chr6 (139-257)||(13944303-13944422)
chr6 (137-257)||(33668785-33668905)
chr6 (130-257)||(33648117-33648245)
chr6 (170-256)||(31724403-31724491)
[»] chr5 (20 HSPs)
chr5 (125-257)||(3957499-3957632)
chr5 (137-257)||(4928882-4929003)
chr5 (125-256)||(33430042-33430173)
chr5 (126-248)||(5324366-5324489)
chr5 (164-257)||(42408519-42408613)
chr5 (137-257)||(3739617-3739738)
chr5 (125-253)||(4929464-4929593)
chr5 (126-257)||(28075923-28076055)
chr5 (126-256)||(8813638-8813769)
chr5 (137-257)||(26687511-26687632)
chr5 (137-257)||(26957242-26957363)
chr5 (137-257)||(3958088-3958209)
chr5 (177-257)||(26688010-26688092)
chr5 (177-257)||(26957741-26957823)
chr5 (170-257)||(3739044-3739132)
chr5 (173-257)||(21770045-21770130)
chr5 (170-257)||(13738104-13738191)
chr5 (148-257)||(42408014-42408124)
chr5 (205-257)||(8813134-8813187)
chr5 (138-175)||(21770490-21770527)
[»] scaffold0229 (1 HSPs)
scaffold0229 (126-257)||(15187-15319)
[»] scaffold1095 (1 HSPs)
scaffold1095 (137-257)||(1496-1617)
[»] scaffold0368 (1 HSPs)
scaffold0368 (126-257)||(11739-11870)


Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 2714054 - 2713797
Alignment:
Q  1 taatatccatttacagtcggatgtaactaacgttctatttgaatcgccctaactttctaaaatgtgtcataataaatctctatcaaatttgtatgaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2714054 taatatccatttacagtcggatgtaactaacgttctatttgaatcgccctaactttctaaaatgtgtcataataaatctctatcaaatttgtatgaaaag 2713955  T
Q  101 gacaactcttcttgcattgaaacttggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaa 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||  |||||||||||| |||||||||||||||| ||||||| ||| |||    
T  2713954 gacaactcttcttgcattgaaacttggtggcatttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaa 2713855  T
Q  201 gaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||    
T  2713854 gaacatattcttaacatgctctctcaacattagatttttcttcacactatcttccaac 2713797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 313 - 406
Target Start/End: Complemental strand, 2713742 - 2713649
Alignment:
Q  313 cagaattttatttcaaaaaccttattagtgtccatgtgaacacacaccttgaaacttctatgtatgaagctgaaattgttaaattttttagtgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2713742 cagaattttatttcaaaaaccttattagtgtccatgtgaacacacaccttgaaacttctatgtatgaagctgaaattgttaaattttttagtgt 2713649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 125 - 257
Target Start/End: Original strand, 31876787 - 31876920
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||||||| ||||||  ||| |||||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||     
T  31876787 tggtggcatttcacatgggaaaggttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctct 31876886  T
Q  225 caacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||| |||||||||||||||||||||||    
T  31876887 caacactagatttttcttcacactatcttccaac 31876920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 25370478 - 25370346
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    ||||||||||||||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  25370478 ggtggcattttacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 25370379  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    || |||||| |||||||||||||||||||||||    
T  25370378 aaaactagatttttcttcacactatcttccaac 25370346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 28223574 - 28223695
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| |||||| ||||||| | |||| ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||| |    
T  28223574 acatgggaaaggttaatcttttccctctatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacacgctctctcaacactagatt 28223673  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  28223674 tttcttcacactatcttccaac 28223695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 125 - 257
Target Start/End: Original strand, 33569719 - 33569852
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||||||| || |||  |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||| |||||      
T  33569719 tggtggcatttcacatgggaaaggtcaatcctttcccaccatggaaaagttggattcaataattagattaagtgaagaacatattctcaacatgctcttt 33569818  T
Q  225 caacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||| |||||||||||||||||||||||    
T  33569819 caacactagatttttcttcacactatcttccaac 33569852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 48091181 - 48091049
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| | |||||||| |||||| |||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  48091181 ggtggcatttcatatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 48091082  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||| ||||||    
T  48091081 aacactagatttttcttcacactatcatccaac 48091049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 12639963 - 12640097
Alignment:
Q  124 ttggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctc 223  Q
    |||||||||||| |||||||||| ||||||  ||| ||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||    
T  12639963 ttggtggcatttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctc 12640062  T
Q  224 ccaacactaga-ttttcttcacactatcttccaac 257  Q
     |||||||||| ||||||||||||| |||||||||    
T  12640063 tcaacactagatttttcttcacactgtcttccaac 12640097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 20075536 - 20075657
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  20075536 acatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 20075635  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  20075636 tttcttcacactatcttccaac 20075657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 20422817 - 20422685
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| ||||||||||  |||||  ||| |||||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  20422817 ggtggcatttcacatgggaaagcttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 20422718  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| ||||||||||||||| |||||||    
T  20422717 aacactagatttttcttcacactatattccaac 20422685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 388753 - 388884
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||| |||||||| |||||| |||||| |    
T  388753 ggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaaaaacatatttttaacatgctctctc 388852  T
Q  226 aacactaga-ttttcttcacactatcttccaa 256  Q
    ||||||||| ||||||||||||||||||||||    
T  388853 aacactagatttttcttcacactatcttccaa 388884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 257
Target Start/End: Complemental strand, 26424489 - 26424358
Alignment:
Q  127 gtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccca 226  Q
    ||||||||| |||||||||| |||| || ||| ||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||  ||    
T  26424489 gtggcatttcacatgggaaaggttagttcttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttca 26424390  T
Q  227 acactaga-ttttcttcacactatcttccaac 257  Q
    |||||||| |||||||||||||||||||||||    
T  26424389 acactagatttttcttcacactatcttccaac 26424358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 36944610 - 36944741
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| ||| | |||| |||||| |||| |||||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||  |    
T  36944610 ggtggcatttcacacgtgaaaggttaatctttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttc 36944709  T
Q  226 aacactaga-ttttcttcacactatcttccaa 256  Q
    ||||||||| ||||||||||||||||||||||    
T  36944710 aacactagatttttcttcacactatcttccaa 36944741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 389480 - 389359
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  |||||||||||| |||||||||||||| | ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  389480 acatgggaaaggttaatcctttcccaccatggaaaagttggattcagtgattagattaagtgaagaacatattcttaacatgttctctcaacactagatt 389381  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  389380 tttcttcacactatcttccaac 389359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 52597501 - 52597622
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| |||||| |||||||||||||  |||||| |||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  52597501 acatgggaaaggttaatcttttcccaccatgggaaagttagattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatt 52597600  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  52597601 tttcttcacactatcttccaac 52597622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 32291015 - 32291147
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||| | ||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  32291015 ggtggcatttcacatgggaaaggttaatcatttccaatcatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 32291114  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||| ||||    
T  32291115 aacactagatttttcttcacactatctttcaac 32291147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 37567560 - 37567428
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||||||| ||||||  ||| ||||||||  ||||||||||||||| ||||||| |||  |||||||||||||||||| |||||| |    
T  37567560 ggtgtcatttcacatgggaaaggttaatacttttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctc 37567461  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  37567460 aacactagatttttcttcacactatcttccaac 37567428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 55815825 - 55815956
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  |||||||| |||  ||||||||||||||| ||||||| ||| |||||||||||||||| || ||||||      
T  55815825 ggtggcatttcacatgggaaaggttaatcctttcccactatgggaaagttggattcaatgattagattaagtgaagaacatattcttatcatgctctctt 55815924  T
Q  226 aacactaga-ttttcttcacactatcttccaa 256  Q
    ||||||||| ||||||||||||||||||||||    
T  55815925 aacactagatttttcttcacactatcttccaa 55815956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 32902540 - 32902419
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||| |||| |||||| |||||||||||||  ||||||| ||||||| ||||||| ||| ||||||||||||||||||| |||||  |||||||||| |    
T  32902540 acatgagaaaggttaatattttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactagatt 32902441  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  32902440 tttcttcacactatcttccaac 32902419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 36945298 - 36945177
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||| ||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  36945298 acatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatt 36945199  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  36945198 tttcttcacactatcttccaac 36945177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 55816525 - 55816404
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||  |||||||||| |    
T  55816525 acatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctttcaacactagatt 55816426  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  55816425 tttcttcacactatcttccaac 55816404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 199010 - 199130
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||  ||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  199010 acatgggaaaggttaatcctttcccaccatgggaaagttaaattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 199109  T
Q  236 tttcttcacactatcttccaa 256  Q
    |||||||||||||||||||||    
T  199110 tttcttcacactatcttccaa 199130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 52597797 - 52597665
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  |||  ||||||   ||||||||||||||| ||||||| ||| |||||||||||||||| || |||||| |    
T  52597797 ggtggcatttcacatgggaaaggttaatcctttttcaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaccatgctctctc 52597698  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  52597697 aacactagatttttcttcacactatcttccaac 52597665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 32901852 - 32901983
Alignment:
Q  127 gtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccca 226  Q
    ||||||||| |||||||||||| | ||  ||| ||||||||  ||||||||||||||| ||||||| |||  |||||||||||||||||| ||| || ||    
T  32901852 gtggcatttcacatgggaaaagattatccttttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctttctca 32901951  T
Q  227 acactaga-ttttcttcacactatcttccaac 257  Q
    |||||||| |||||||||||||||||||||||    
T  32901952 acactagatttttcttcacactatcttccaac 32901983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 48782149 - 48782028
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  |||| |||||||  ||||||||||||||| ||||||| ||| |||||||||||| |||||| | |||| |||||||||| |    
T  48782149 acatgggaaaggttaatcatttcgcaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgttctctcaacactagatt 48782050  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  48782049 tttcttcacactatcttccaac 48782028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 25369794 - 25369914
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||| |||| |||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  25369794 acatgggaaaggttaatccttttccactatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 25369893  T
Q  236 tttcttcacactatcttccaa 256  Q
    |||||||||| ||||||||||    
T  25369894 tttcttcacaatatcttccaa 25369914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 199313 - 199216
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctct 222  Q
    ||||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||    
T  199313 tggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctct 199216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 12640661 - 12640540
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||||||||  |||||  ||||||||||||  ||||||||||||||| ||||||| |||||||||||||||| |||||| | |||| |||||||| | |    
T  12640661 acatgggaaagcttaatcctttcccaccatgggaaagttggattcaatgattagattaagcgaagaacatatttttaacatgttctctcaacactaaatt 12640562  T
Q  236 tttcttcacactatcttccaac 257  Q
    |||||||||||||| |||||||    
T  12640561 tttcttcacactattttccaac 12640540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 20076233 - 20076140
Alignment:
Q  165 atgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||| ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||| ||||| |||||||||||||||||||||||    
T  20076233 atgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaactctagatttttcttcacactatcttccaac 20076140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 40345205 - 40345084
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| |||||| ||||||||| |||  |||||| |||||||| ||||||| ||| |||||||||||| |||| | | |||| |||||||||| |    
T  40345205 acatgggaaaggttaatcttttcccacaatgggaaagttagattcaatgattagattaagtgaagaacatatttttaatatggtctctcaacactagatt 40345106  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  40345105 tttcttcacactatcttccaac 40345084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 29809175 - 29809041
Alignment:
Q  124 ttggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctc 223  Q
    |||||||||||| | |||||||| ||||||  ||||  | ||||  ||||||| ||||||| ||||||| ||| ||||||||||||||||||| |||||     
T  29809175 ttggtggcatttcatatgggaaaggttaatcatttcttatcatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgctctt 29809076  T
Q  224 ccaacactaga-ttttcttcacactatcttccaac 257  Q
     |||||||||| ||||||||||||||| |||||||    
T  29809075 tcaacactagatttttcttcacactattttccaac 29809041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 40847677 - 40847767
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaaca 216  Q
    |||||||||| |||||| ||| ||||||  ||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  40847677 ggtggcatttcacatggaaaaggttaatcctttcccaccatgagaaagttggattcaatgattagattaagtgaagaacatattcttaaca 40847767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 36111291 - 36111171
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||| ||||||||||| ||||||| ||| |||||||||||||||||||   ||||  ||||||||| |    
T  36111291 acatgggaaaggttaatcctttcccaccatgggaaa-ttggattcaatgattagattaagtgaagaacatattcttaacatattctctaaacactagatt 36111193  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  36111192 tttcttcacactatcttccaac 36111171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 40344516 - 40344635
Alignment:
Q  139 atgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttt 237  Q
    ||||||||  |||||  |||| || ||||| ||||||||||| ||| ||||||| ||| ||||||||||||||||||| | ||||  ||||||||| |||    
T  40344516 atgggaaagtttaatcctttctcatcatgagaaagttggattaaattattagattaagtgaagaacatattcttaacatgttctcttaacactagatttt 40344615  T
Q  238 tcttcacactatcttccaac 257  Q
    ||||||||||||||||||||    
T  40344616 tcttcacactatcttccaac 40344635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 26423770 - 26423844
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattct 211  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  26423770 acatgggaaaggttaatcctttcccaccatgaaaaagttggattcaatgattagattaagtgaagaacatattct 26423844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 31842808 - 31842677
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||||||||  |||| ||||||  ||||| ||||||  ||||| ||||||||| ||||||| ||| |||||||||||| |||||| | |||| |    
T  31842808 ggtgacattttacatatgaaaggttaatcatttccaaccatgggaaagt-ggattcaatgattagattaagtgaagaacatattattaacatgttctctc 31842710  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    |||||| || |||||||||||||||||||||||    
T  31842709 aacactggatttttcttcacactatcttccaac 31842677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 20422142 - 20422260
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  |||| | |||||||| ||||||| ||| |||   ||||||||||||| |||||| |||||||||| |    
T  20422142 acatgggaaaggttaatcctttcccaccatgggaaaggtagattcaatgattagattaagtgaa---catattcttaacatgctctctcaacactagatt 20422238  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||| ||||||||||||||    
T  20422239 tttcttcgcactatcttccaac 20422260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 35427257 - 35427373
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||| || |||||  ||| ||||||||||| ||||||| ||| ||||||||||||||||||| | ||||  ||||||||| |    
T  35427257 acatgggaaaggttaatccttttccgccatgggaaa-ttggattcaatgattagattaagtgaagaacatattcttaacatgttctctaaacactagatt 35427355  T
Q  236 tttcttcacactatcttc 253  Q
    ||||||||||||||||||    
T  35427356 tttcttcacactatcttc 35427373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 37566941 - 37567030
Alignment:
Q  164 catgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatctt 252  Q
    ||||| ||| || |||||||| |||| || ||| ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  37566941 catgagaaaattagattcaatgattaaattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatctt 37567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 40848205 - 40848084
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacact-agat 235  Q
    |||||| ||| ||||||  |||| ||| |||  |||||| |||||||| ||||||| ||| ||||||||||||||||||| | |||| ||||||| |  |    
T  40848205 acatggaaaaggttaatcatttctcactatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactgaatt 40848106  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||| ||||    
T  40848105 tttcttcacactatctttcaac 40848084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 31877474 - 31877386
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||| ||| ||||||| ||| |||||||||||| |||||| | | || |||||||||| ||||||||||||||| |||||||    
T  31877474 aaagttggatttaatgattagattaagtgaagaacatatttttaacatgttatctcaacactagatttttcttcacactattttccaac 31877386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 48781525 - 48781613
Alignment:
Q  169 aaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaa 256  Q
    |||||||||||||||| ||||||| ||| || ||| |||||||||||| ||| |  |||||||| | ||||||||||||||||||||||    
T  48781525 aaaagttggattcaatgattagattaagtgatgaatatattcttaacatgctttttcaacactaaatttttcttcacactatcttccaa 48781613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 3708807 - 3708905
Alignment:
Q  160 ccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||  ||||||||||||||| ||||||| |||  ||||||||| ||||| || | |||| || ||||||| |||||||||||||||||| ||||    
T  3708807 ccaccatgggaaagttggattcaatgattagattaagtaaagaacatactcttatcatgttctctcagcactagatttttcttcacactatctttcaac 3708905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 6862645 - 6862759
Alignment:
Q  124 ttggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctc 223  Q
    |||||||||||| |||| ||||| || ||| |||| | |||||   ||||||||||||||  ||||||| ||| ||||||||||||||||||| || ||     
T  6862645 ttggtggcatttcacataggaaaggtcaatctttttctaccataggaaagttggattcaaagattagattaagtgaagaacatattcttaacatgcactt 6862744  T
Q  224 ccaacactagatttt 238  Q
     |||||||| |||||    
T  6862745 tcaacactaaatttt 6862759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 48090477 - 48090551
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattct 211  Q
    |||||||||| ||||||   |||||||||||  ||||||||||||||| ||||||| ||| | ||||||||||||    
T  48090477 acatgggaaaggttaatccattcccaccatgggaaagttggattcaatgattagattaagtgtagaacatattct 48090551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 47328466 - 47328397
Alignment:
Q  142 ggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattct 211  Q
    ||||| ||| || |||||| || ||| ||||||| |||||||||||||||| ||| ||||||||||||||    
T  47328466 ggaaaggttcatcttttcctactatggaaaagttagattcaataattagattaagtgaagaacatattct 47328397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 35427882 - 35427837
Alignment:
Q  212 taacacgctctcccaacactagatttt-cttcacactatcttccaa 256  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||    
T  35427882 taacatgctctctcaacactagatttttcttcacactatcttccaa 35427837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 8e-40; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 11999166 - 11999035
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |    
T  11999166 ggtggcatttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagatgaagtgaagaacatattcttaacatgctctctc 11999067  T
Q  226 aacactaga-ttttcttcacactatcttccaa 256  Q
    ||||||||| ||||||||||||||||||||||    
T  11999066 aacactagatttttcttcacactatcttccaa 11999035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 33114274 - 33114143
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  33114274 ggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 33114175  T
Q  226 aacactaga-ttttcttcacactatcttccaa 256  Q
    ||||||||| ||||||||||||||||||||||    
T  33114174 aacactagatttttcttcacactatcttccaa 33114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 16889193 - 16889327
Alignment:
Q  124 ttggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctc 223  Q
    |||||||||||| |||||||||| |||||| |||||||||||||  ||||||||||||||| ||||||| ||| |||||||||||||||| || |||||     
T  16889193 ttggtggcatttcacatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttatcatgctctt 16889292  T
Q  224 ccaacactaga-ttttcttcacactatcttccaac 257  Q
     |||||||||| |||||||||||||||||||||||    
T  16889293 tcaacactagatttttcttcacactatcttccaac 16889327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 7818474 - 7818606
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| |||||||||||||||| || |||||| |    
T  7818474 ggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttatcatgctctctc 7818573  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  7818574 aacactagatttttcttcacactatcttccaac 7818606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 16879886 - 16880020
Alignment:
Q  124 ttggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctc 223  Q
    |||||||||||| |||||||||||||||||  ||||| | ||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||    
T  16879886 ttggtggcatttcacatgggaaaagttaatcatttcctatcatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctc 16879985  T
Q  224 ccaacactaga-ttttcttcacactatcttccaac 257  Q
     ||| | | || |||||||||||||||||||||||    
T  16879986 tcaatatttgatttttcttcacactatcttccaac 16880020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 11998467 - 11998588
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  11998467 acatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatt 11998566  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  11998567 tttcttcacactatcttccaac 11998588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 30115397 - 30115499
Alignment:
Q  156 tttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttcc 254  Q
    |||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||||    
T  30115397 tttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactagatttttcttcacactatcttcc 30115496  T
Q  255 aac 257  Q
    |||    
T  30115497 aac 30115499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 16889884 - 16889783
Alignment:
Q  156 tttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttcc 254  Q
    ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||    
T  16889884 tttcccaccatgggaaagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcc 16889785  T
Q  255 aa 256  Q
    ||    
T  16889784 aa 16889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 39852878 - 39852757
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||| |||| ||||||  ||||||||||| |||||||| |||||||| ||||||| ||| |||||| |||||||||||| |||||| |||||||||| |    
T  39852878 acatgagaaaggttaatcctttcccaccataaaaaagttagattcaattattagattaagtgaagaatatattcttaacatgctctctcaacactagatt 39852779  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  39852778 tttcttcacactatcttccaac 39852757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 44061996 - 44062117
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||| |||| ||||||  ||||| ||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  44061996 acatgagaaaggttaatactttccaaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 44062095  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  44062096 tttcttcacactatcttccaac 44062117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 39852154 - 39852286
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| | |||||||| ||||||  ||||||||||||  |||||| |||||||| ||||||| ||| ||||||||||||||||||| |||| | |    
T  39852154 ggtggcatttcaaatgggaaaggttaatcctttcccaccatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctccctc 39852253  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||| ||||||||||||||||||    
T  39852254 aacactagattttttttcacactatcttccaac 39852286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 40309586 - 40309454
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||| | ||| ||||||  |||||||||||   ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  40309586 ggtgacatttcacatagaaaaggttaatcatttcccaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 40309487  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  40309486 aacactagatttttcttcacactatcttccaac 40309454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 43591702 - 43591570
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||||||| ||||||| ||||||||||||  |||||| || ||||| ||||||| ||| ||||||||||||||||||| ||||||      
T  43591702 ggtgtcatttcacatgggaaaggttaattatttcccaccatgggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctctt 43591603  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| ||||||||||| |||||||||||    
T  43591602 aacactagatttttcttcacaatatcttccaac 43591570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 2209036 - 2209138
Alignment:
Q  156 tttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttcc 254  Q
    ||||||||||||| |||||| |||||||| ||||||| ||| ||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||||||    
T  2209036 tttcccaccatgagaaagttcgattcaatgattagattaagtgaataacatattcttaacatgctctctcaacactagatttttcttcacactatcttcc 2209135  T
Q  255 aac 257  Q
    |||    
T  2209136 aac 2209138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 38778184 - 38778286
Alignment:
Q  156 tttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttcc 254  Q
    ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||||    
T  38778184 tttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactagatttttcttcacactatcttcc 38778283  T
Q  255 aac 257  Q
    |||    
T  38778284 aac 38778286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 43481337 - 43481235
Alignment:
Q  156 tttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttcc 254  Q
    ||||||||||||  ||||||||||||||| ||||||| ||| |||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||    
T  43481337 tttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgctctctcaacactagatttttcttcacactatcttcc 43481238  T
Q  255 aac 257  Q
    |||    
T  43481237 aac 43481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 43591018 - 43591139
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||| ||||||| ||||||| ||  ||||||||||||||||||| | |||| |||||||||| |    
T  43591018 acatgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaaatgaagaacatattcttaacatgatctctcaacactagatt 43591117  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  43591118 tttcttcacactatcttccaac 43591139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 249
Target Start/End: Original strand, 43480616 - 43480740
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| |||||| ||||  |||||||  ||||||||||| ||| ||||||| ||| ||||||||||||||||||| | |||| |    
T  43480616 ggtggcatttcacatgggaaaggttaatctttttacaccatgggaaagttggattaaatgattagattaagtgaagaacatattcttaacatgttctctc 43480715  T
Q  226 aacactaga-ttttcttcacactat 249  Q
    ||||||||| |||||||||||||||    
T  43480716 aacactagatttttcttcacactat 43480740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 35237257 - 35237391
Alignment:
Q  124 ttggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctc 223  Q
    |||||| ||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||| ||||||||||||||| |||||     
T  35237257 ttggtgacatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaataacatattcttaacatgctctt 35237356  T
Q  224 ccaacactaga-ttttcttcacactatcttccaac 257  Q
     ||| |||| | |||||||||||||||||| ||||    
T  35237357 tcaatactaaatttttcttcacactatctttcaac 35237391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 44062684 - 44062550
Alignment:
Q  124 ttggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctc 223  Q
    |||||||||||| | || ||||| ||||||  ||| ||||||||  ||||||||||||||| ||||||| ||| | |||| ||||| |||||| ||||||    
T  44062684 ttggtggcatttcatataggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtggagaatatattattaacatgctctc 44062585  T
Q  224 ccaacactaga-ttttcttcacactatcttccaac 257  Q
     |||||||||| |||||||||||||||||||||||    
T  44062584 tcaacactagatttttcttcacactatcttccaac 44062550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 7819172 - 7819051
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||||||||  ||||| |||||||||||||  |||||| |||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  7819172 acatgggaaagattaatcttttcccaccatgcgaaagttagattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatt 7819073  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||| || |||||    
T  7819072 tttcttcacactaactaccaac 7819051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 30116071 - 30115950
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||| ||||||||  ||||||||||||||| ||||||| |||  ||||| |||||||||||| | |||| |||||||||| |    
T  30116071 acatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtaaagaatatattcttaacatgttctctcaacactagatt 30115972  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  30115971 tttcttcacactatcttccaac 30115950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 33113586 - 33113707
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||||||||  |||||  ||||||||||||  ||||||||||||||| ||||||| ||| |||||| |||||||||||| | ||||  ||||||||| |    
T  33113586 acatgggaaagattaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaatatattcttaacatgttctcttaacactagatt 33113685  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  33113686 tttcttcacactatcttccaac 33113707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 4374343 - 4374255
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||    
T  4374343 aaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattagatttttcttcacactatcttccaac 4374255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 10805992 - 10806080
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||||||| ||||||| ||  ||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  10805992 aaagttggattcaatgattagattaaatgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaac 10806080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 10806518 - 10806391
Alignment:
Q  131 cattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacac 230  Q
    ||||| |||||||||| |||||| |||||| ||||||  |||||| |||||||| |||| || |||  |||||||||||||||||| ||||||  || ||    
T  10806518 catttcacatgggaaaggttaatcttttcctaccatgggaaagtttgattcaatgattaaattaagtaaagaacatattcttaacatgctctcttaaaac 10806419  T
Q  231 taga-ttttcttcacactatcttccaac 257  Q
    |||| |||||||||||||||||||||||    
T  10806418 tagatttttcttcacactatcttccaac 10806391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 125 - 257
Target Start/End: Complemental strand, 4375079 - 4374946
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| | ||||||||  | |||  ||| ||||||||| ||||||||||||||| ||| ||| ||| |||||||||||| |||||| |||||      
T  4375079 tggtggcatttcatatgggaaagatgaatcattttccaccatgagaaagttggattcaatgattggattaagtgaagaacatatttttaacatgctcttt 4374980  T
Q  225 caacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||| ||||||| |||||||||||||||    
T  4374979 caacactagatttttctttacactatcttccaac 4374946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 238
Target Start/End: Complemental strand, 16880593 - 16880492
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactagatt 236  Q
    ||||||||||  |||||  ||||||||||||  |||||| |||||||| ||||||| ||| ||||||||||||||||||| |||||| ||||||||||||    
T  16880593 acatgggaaagattaatcctttcccaccatgtgaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 16880494  T
Q  237 tt 238  Q
    ||    
T  16880493 tt 16880492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 38778870 - 38778752
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||| |||| ||||||  |||| |||||||| ||||||| ||||||| ||||||| ||| |||||| ||||| ||||||  ||||| |||||||||| |    
T  38778870 acatgagaaaggttaatcatttctcaccatgagaaagttgtattcaatgattagattaagtgaagaatatatttttaacatactctctcaacactagatt 38778771  T
Q  236 tttcttcacactatcttcc 254  Q
    |||||||||||||||||||    
T  38778770 tttcttcacactatcttcc 38778752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 36848272 - 36848155
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||||||||  |||||  ||| |||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||||     || |||||||||| |    
T  36848272 acatgggaaagcttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaaca----ttctcaacactagatt 36848177  T
Q  236 tttcttcacactatcttccaac 257  Q
    |||||||||||||| |||||||    
T  36848176 tttcttcacactattttccaac 36848155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 4373697 - 4373818
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||| |||   ||||||| ||||||| |||| || ||| ||||||||||||||||||| | |||| |||||||||| |    
T  4373697 acatgggaaatgttaatcatttcccatcataggaaagttgaattcaatgattatattaagtgaagaacatattcttaacatgttctcgcaacactagatt 4373796  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||| || |||||    
T  4373797 tttcttcacactaactaccaac 4373818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 35237938 - 35237865
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattct 211  Q
    |||||||||| ||||||  |||||||||||  |||||||| ||||||||||||||| ||| ||||||||||||||    
T  35237938 acatgggaaaggttaatcctttcccaccatagaaaagttg-attcaataattagattaagtgaagaacatattct 35237865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 40907610 - 40907688
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaaca 216  Q
    |||||||||| ||||||  |||||||||| |  ||||||| ||||||| ||||||| ||| |||||||||||||||||||    
T  40907610 acatgggaaaggttaatcctttcccaccacgggaaagttg-attcaatgattagattaagtgaagaacatattcttaaca 40907688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 43434750 - 43434701
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagtt 175  Q
    |||||||||| |||||||||| || ||| ||||||||||||| |||||||    
T  43434750 ggtggcatttaacatgggaaaggtgaatcttttcccaccatggaaaagtt 43434701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 37532576 - 37532620
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaa 170  Q
    |||||||||| |||||||||| ||||||  |||||||||||||||    
T  37532576 ggtggcatttcacatgggaaaggttaatcctttcccaccatgaaa 37532620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 3944893 - 3945027
Alignment:
Q  124 ttggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctc 223  Q
    |||||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||    
T  3944893 ttggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctc 3944992  T
Q  224 ccaacactaga-ttttcttcacactatcttccaac 257  Q
     |||||||||| |||||||||||||||||||||||    
T  3944993 tcaacactagatttttcttcacactatcttccaac 3945027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 23584969 - 23584837
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  23584969 ggtggcatttcacatgggaaaggttaatcctttcccaccatggtaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 23584870  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||| ||||||||    
T  23584869 aacactagatttttcttcacactaccttccaac 23584837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 23599792 - 23599660
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  23599792 ggtggcatttcacatgggaaaggttaatcctttcccaccatggtaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 23599693  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||| ||||||||    
T  23599692 aacactagatttttcttcacactaccttccaac 23599660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 37373965 - 37374097
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    ||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| |||| || ||| ||||||||||||||||||| | | || |    
T  37373965 ggtggcattttacatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattcttaacatgttttctc 37374064  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  37374065 aacactagatttttcttcacactatcttccaac 37374097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 50687794 - 50687662
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||||||| ||||||| ||||||||||||  |||||| |||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  50687794 ggtgacatttcacatgggaaaggttaattctttcccaccatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctctctc 50687695  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  50687694 aacactagatttttcttcacactatcttccaac 50687662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 32672166 - 32672298
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||  ||||||||||| ||| ||||||| ||| ||||||||||||||||| | |||||| |    
T  32672166 ggtggcattttacatgggaaaggttaatcctttcccaacatgggaaagttggatttaatgattagattaagtgaagaacatattcttaatatgctctctc 32672265  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  32672266 aacactagatttttcttcacactatcttccaac 32672298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 48219321 - 48219189
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    ||||||||||||||||||||| ||||||| |||| |||||||  ||| ||||||||||| ||||||| ||| || ||| |||||||||||| |||||| |    
T  48219321 ggtggcattttacatgggaaaggttaattctttctcaccatgggaaaattggattcaatgattagattaagtgatgaatatattcttaacatgctctctc 48219222  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  48219221 aacactagacttttcttcacactatcttccaac 48219189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 29342352 - 29342473
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| |||||| |||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||| | | |||||||| |    
T  29342352 acatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctccctccacactagatt 29342451  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  29342452 tttcttcacactatcttccaac 29342473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 125 - 257
Target Start/End: Original strand, 44868006 - 44868139
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||| ||||| ||||||  ||| ||||||||  ||||||||||||||| ||||||| |||  |||||||||||||||||| ||||||     
T  44868006 tggtggcatttcacataggaaaggttaatcattttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctct 44868105  T
Q  225 caacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||| |||||||||||||||||||||||    
T  44868106 caacactagatttttcttcacactatcttccaac 44868139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 48218602 - 48218723
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||| |||| |||||| ||||||||| ||| |||||||||||||||| ||||||| ||| ||| ||||||||||||||| |||||| |||||||||| |    
T  48218602 acatgagaaaggttaatcttttcccactatggaaaagttggattcaatgattagattaagtgaataacatattcttaacatgctctctcaacactagatt 48218701  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  48218702 tttcttcacactatcttccaac 48218723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 25025174 - 25025306
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||| ||||  |||||| |||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  25025174 ggtggcatttcacatgggaaaggttaatcctttcccatcatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctctctc 25025273  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||| ||||||||||||||||||    
T  25025274 aacactagattttttttcacactatcttccaac 25025306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 25025839 - 25025718
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  |||||| |||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  25025839 acatgggaaaggttaatcctttcccaccatgggaaagtttgattcaatgattagattaagagaagaacatattcttaacatgttctctcaacactagatt 25025740  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  25025739 tttcttcacactatcttccaac 25025718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 31015010 - 31014878
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| | |||||||| |||||| |||||||| |||   ||||||||||||||| ||||||| ||| |||||||||||||||| || |||||| |    
T  31015010 ggtggcatttcatatgggaaaggttaatcttttcccatcataggaaagttggattcaatgattagattaagtgaagaacatattcttaccatgctctctc 31014911  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||| | |||||||||||||||||||||||    
T  31014910 aacactaaatttttcttcacactatcttccaac 31014878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 37375546 - 37375422
Alignment:
Q  134 tttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactag 233  Q
    ||||||||||||| ||||||  ||||||||||| | |||||||||||| || ||||||| ||| ||||||||| ||||||||| | |||| |||||||||    
T  37375546 tttacatgggaaaggttaatcctttcccaccataagaaagttggattcgatgattagattaagtgaagaacatcttcttaacatgttctctcaacactag 37375447  T
Q  234 a-ttttcttcacactatcttccaac 257  Q
    | |||||||||||||||||||||||    
T  37375446 atttttcttcacactatcttccaac 37375422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 55281846 - 55281966
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||| ||||||| ||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  55281846 acatgggaaaggttaatcctttcccaccatgggaaaattggatttaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 55281945  T
Q  236 tttcttcacactatcttccaa 256  Q
    |||||||||||||||||||||    
T  55281946 tttcttcacactatcttccaa 55281966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 124 - 253
Target Start/End: Original strand, 42356231 - 42356364
Alignment:
Q  124 ttggtggcattttacatgggaaaagttaattttttcccacca---tgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgct 220  Q
    |||||||||||| |||||||||| || |||  ||||||||||   ||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||    
T  42356231 ttggtggcatttcacatgggaaaggtcaatcctttcccaccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgct 42356330  T
Q  221 ctcccaacactaga-ttttcttcacactatcttc 253  Q
    ||| |||||||||| |||||||||||||||||||    
T  42356331 ctctcaacactagatttttcttcacactatcttc 42356364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 257
Target Start/End: Original strand, 19555269 - 19555402
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||  ||| |||||| |||||||| ||||  ||||||||||| ||| ||||||| ||| ||||||||||||||||||| | ||||     
T  19555269 tggtggcatttcacatgaaaaaggttaatcttttcccatcatgggaaagttggattaaatgattagattaagtgaagaacatattcttaacatgttctct 19555368  T
Q  225 caacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||| ||||||||||||||| |||||||    
T  19555369 caacactagatttttcttcacactatattccaac 19555402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 249
Target Start/End: Original strand, 24220590 - 24220703
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||| ||||| |||||| |||| ||||||||||| || |||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  24220590 acatgggaaaggttaattctttcctaccatggaaaaattggattcaatgatcagattaagtgaagaacatattcttaacatgctctctcaacactagatt 24220689  T
Q  236 tttcttcacactat 249  Q
    ||||||||||||||    
T  24220690 tttcttcacactat 24220703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 44868693 - 44868572
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||| || |||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  44868693 acatgggaaaggttaatcctttcccaccatgggaaaatttgattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 44868594  T
Q  236 tttcttcacactatcttccaac 257  Q
    |||||| |||||||||||||||    
T  44868593 tttcttaacactatcttccaac 44868572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 256
Target Start/End: Complemental strand, 8427818 - 8427698
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||||| || ||||||  ||||||||||||  |||||| |||| ||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  8427818 acatggggaaggttaatcctttcccaccatgggaaagttagatttaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 8427719  T
Q  236 tttcttcacactatcttccaa 256  Q
    |||||||||||||||||||||    
T  8427718 tttcttcacactatcttccaa 8427698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 37374819 - 37374946
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||||||| ||||||  ||||||     |  ||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||     
T  37374819 tggtggcatttcacatgggaaaggttaatcctttccc-----gggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctct 37374913  T
Q  225 caacactaga-ttttcttcacactatcttccaa 256  Q
    |||||||||| ||||||||||||||||||||||    
T  37374914 caacactagatttttcttcacactatcttccaa 37374946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 32672824 - 32672737
Alignment:
Q  171 aagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  32672824 aagttggatttaatgattagattaagcgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaac 32672737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 41875689 - 41875570
Alignment:
Q  139 atgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttt 237  Q
    |||||||||||||||  |||   ||||||  |||||||| |||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||    
T  41875689 atgggaaaagttaatcattttttaccatgggaaagttgggttcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttt 41875590  T
Q  238 tcttcacactatcttccaac 257  Q
    ||||||||||||||||||||    
T  41875589 tcttcacactatcttccaac 41875570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 29343041 - 29342947
Alignment:
Q  164 catgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||| |||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||||| ||||||||||||||||    
T  29343041 catggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttctgcacactatcttccaac 29342947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 47737729 - 47737627
Alignment:
Q  156 tttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttcc 254  Q
    ||||||||||||  || |||||||||||| ||||||| ||| |||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||    
T  47737729 tttcccaccatgggaatgttggattcaatgattagattaagtgaagaacatattcttatcatgctctctcaacactagatttttcttcacactatcttcc 47737630  T
Q  255 aac 257  Q
    |||    
T  47737629 aac 47737627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 37374681 - 37374560
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| |||||  |||||||| |||   ||||||||||||||| ||||||| ||| |||||||||||| |||||| | |||| |||||||||| |    
T  37374681 acatgggaaatgttaaccttttcccatcataggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgttctctcaacactagatt 37374582  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  37374581 tttcttcacactatcttccaac 37374560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 49752317 - 49752405
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||| ||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  49752317 aaagtaggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaac 49752405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 19555959 - 19555877
Alignment:
Q  176 ggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  19555959 ggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaac 19555877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 38575690 - 38575596
Alignment:
Q  164 catgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||| |||||||||||||||| |||| || ||| ||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||    
T  38575690 catggaaaagttggattcaatgattaaattaagtgaagaacatattcttaacatgctctctcaacattagatttttcttcacactatcttccaac 38575596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 49752966 - 49752864
Alignment:
Q  156 tttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttcc 254  Q
    ||||| ||||||  ||||||||||||||| ||||||| ||| |||||| ||||| |||||| |||||| |||||||||| ||||||||||||||||||||    
T  49752966 tttcctaccatgggaaagttggattcaatgattagattaagtgaagaatatatttttaacatgctctctcaacactagatttttcttcacactatcttcc 49752867  T
Q  255 aac 257  Q
    |||    
T  49752866 aac 49752864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 31014371 - 31014468
Alignment:
Q  160 ccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaa 256  Q
    ||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||| | ||||||||||||||||||||||    
T  31014371 ccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactaaatttttcttcacactatcttccaa 31014468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 50675211 - 50675079
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||||||| ||||||  |||  ||| |||  ||||||| ||||||| ||||||| ||| |||||||||||| |||||| || ||| |    
T  50675211 ggtgacatttcacatgggaaaggttaatcctttttcacaatgggaaagttgaattcaatgattagattaagtgaagaacatattattaacatgcactctc 50675112  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  50675111 aacactagatttttcttcacactatcttccaac 50675079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 23584248 - 23584365
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||| | ||||||  ||||||||||||  |||||| |||||||| ||||||| ||| ||| ||||||||||||||| | |||| ||||| |||| |    
T  23584248 acatgggacaggttaatcctttcccaccatgggaaagttcgattcaatgattagattaagtgaaaaacatattcttaacatgttctctcaacagtagatt 23584347  T
Q  236 tttcttcacactatcttc 253  Q
    ||||||||||||||||||    
T  23584348 tttcttcacactatcttc 23584365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 23599071 - 23599188
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||| | ||||||  ||||||||||||  |||||| |||||||| ||||||| ||| ||| ||||||||||||||| | |||| ||||| |||| |    
T  23599071 acatgggacaggttaatcctttcccaccatgggaaagttcgattcaatgattagattaagtgaaaaacatattcttaacatgttctctcaacagtagatt 23599170  T
Q  236 tttcttcacactatcttc 253  Q
    ||||||||||||||||||    
T  23599171 tttcttcacactatcttc 23599188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 43658937 - 43658854
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatctt 252  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||  ||||| |||| ||||||||||||||||||    
T  43658937 aaagttggattcaatgattagattaagtgaagaacatattcttaacaggctctttcaacattagatttttcttcacactatctt 43658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 40887981 - 40887903
Alignment:
Q  172 agttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactat 249  Q
    ||||| ||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  40887981 agttgtattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactat 40887903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 50674640 - 50674756
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||| |||| |||||| |||||||||||||  |||||||||||     ||||||| ||| | |||||||||| ||| || |||||| |||||||||| |    
T  50674640 acatgagaaaggttaatcttttcccaccatgggaaagttggatt-----attagattaagtgtagaacatatttttagcatgctctctcaacactagatt 50674734  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  50674735 tttcttcacactatcttccaac 50674756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 38575065 - 38575153
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||||||| ||||||| ||  ||||||||||||||||||| | |||| |||||||||| ||||||||| |||||||| ||||    
T  38575065 aaagttggattcaatgattagattaaatgaagaacatattcttaacatgttctctcaacactagatttttcttcaaactatctttcaac 38575153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 55282506 - 55282395
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||   |||||  ||||||||||||  ||||||||||| ||| ||||||| ||| ||||||||||||||||||| |||| | |    
T  55282506 ggtggcatttcacatgggaagt-ttaatcctttcccaccatgggaaagttggatttaatgattagattaagtgaagaacatattcttaacatgctccctc 55282408  T
Q  226 aacactagatttt 238  Q
     ||||||||||||    
T  55282407 gacactagatttt 55282395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 8427269 - 8427348
Alignment:
Q  179 ttcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||||| ||||||| ||  |||||||||||||||| || |||||| |||||||||| |||||||||||||||||||||||    
T  8427269 ttcaatgattagattaaatgaagaacatattcttatcatgctctctcaacactagatttttcttcacactatcttccaac 8427348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 24221214 - 24221130
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttc 253  Q
    ||||||||||| ||| |||| || ||| |||||||| |||||||||| |||||| |||||||||| ||||||||| |||||||||    
T  24221214 aaagttggatttaatgattatattaagtgaagaacacattcttaacatgctctctcaacactagatttttcttcaaactatcttc 24221130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 47737108 - 47737195
Alignment:
Q  171 aagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||||||  ||||||| ||| | ||||||||||||||||| | |||| ||| |||||| |||||||| ||||||||||||||    
T  47737108 aagttggattcaacgattagattaagtggagaacatattcttaacatgttctctcaatactagatttttcttcgcactatcttccaac 47737195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 256
Target Start/End: Original strand, 43103901 - 43104030
Alignment:
Q  128 tggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaa 227  Q
    |||| ||| |||||| |||||  |||| |||||||||||   ||||||||||||||  ||| ||| ||| ||| ||||||||||||||| |||||  |||    
T  43103901 tggcgtttcacatggaaaaagccaattctttcccaccataggaaagttggattcaacgattggattaagtgaataacatattcttaacatgctctttcaa 43104000  T
Q  228 cactaga-ttttcttcacactatcttccaa 256  Q
     |||| | ||||||||||||||||| ||||    
T  43104001 tactatatttttcttcacactatctcccaa 43104030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 3945523 - 3945464
Alignment:
Q  198 gaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaa 256  Q
    |||||||||||| |||||| | |||| |||||||||| ||||||||||||||||||||||    
T  3945523 gaagaacatatttttaacatgttctctcaacactagatttttcttcacactatcttccaa 3945464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 41459141 - 41459204
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaag 201  Q
    |||||||||| ||||||  ||||||||||||| |||||| |||||||| ||||||| ||| ||||    
T  41459141 acatgggaaaggttaatcctttcccaccatgagaaagtt-gattcaatgattagattaagtgaag 41459204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 42356843 - 42356763
Alignment:
Q  178 attcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactagatttt-cttcacactatcttccaac 257  Q
    ||||||| ||||||| ||  ||| || |||||| || ||  ||||| |||||||||||||| |||||||||||||||||||    
T  42356843 attcaatgattagattaaatgaataatatattcctagcattctctctcaacactagatttttcttcacactatcttccaac 42356763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 125 - 257
Target Start/End: Complemental strand, 20244258 - 20244125
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||||||| ||||||  |||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||     
T  20244258 tggtggcatttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctct 20244159  T
Q  225 caacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||| | |||||||||||||||||||||||    
T  20244158 caacactaaatttttcttcacactatcttccaac 20244125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 3595257 - 3595378
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||| ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  3595257 acatgggaaaggttaattctttcccaccatgggaaagttggattcaatgattagataaagtgaagaacatattcttaacatgctctctcaacactagatt 3595356  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  3595357 tttcttcacactatcttccaac 3595378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 125 - 257
Target Start/End: Original strand, 9224265 - 9224398
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||     
T  9224265 tggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctct 9224364  T
Q  225 caacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||| ||||||||||| |||||||||||    
T  9224365 caacactagatttttcttcacattatcttccaac 9224398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 11256826 - 11256694
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    ||||||||||||||||| ||| ||||||  ||| ||||||||| ||||||||||||||| ||||||| ||| |||||| |||||||||||| |||||| |    
T  11256826 ggtggcattttacatggaaaaggttaatcattttccaccatgagaaagttggattcaatgattagattaagtgaagaatatattcttaacatgctctctc 11256727  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  11256726 aacactagatttttcttcacactatcttccaac 11256694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 7583880 - 7583751
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||||||| |||||| ||||||||| |||  ||||||||||||||| ||||| | ||| ||||||||||||||||||| ||||||     
T  7583880 tggtggcatttcacatgggaaaggttaatcttttcccactatgggaaagttggattcaatgattagcttaagtgaagaacatattcttaacatgctctct 7583781  T
Q  225 caacactaga-ttttcttcacactatcttc 253  Q
    |||||||||| |||||||||||||||||||    
T  7583780 caacactagatttttcttcacactatcttc 7583751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 131 - 256
Target Start/End: Complemental strand, 16903170 - 16903045
Alignment:
Q  131 cattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacac 230  Q
    |||||||||||||||| ||||||  ||| ||||||||| ||||||||||||||| ||||||| ||| ||| |||||||| |||||| |||||  ||||||    
T  16903170 cattttacatgggaaaggttaatccttttccaccatgagaaagttggattcaatgattagattaagtgaataacatatttttaacatgctctttcaacac 16903071  T
Q  231 tagattttcttcacactatcttccaa 256  Q
    ||||||||||||||||||||||||||    
T  16903070 tagattttcttcacactatcttccaa 16903045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 4387046 - 4386914
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| | ||||      
T  4387046 ggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctt 4386947  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  4386946 aacactagatttttcttcacactatcttccaac 4386914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 16571118 - 16571250
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||| ||||||||||||||| |||||| |    
T  16571118 ggtgccatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaaaaacatattcttaacatgctctctc 16571217  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  16571218 aacactagatttttcttcacactatcttccaac 16571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 28223788 - 28223919
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  |||||||||||   ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  28223788 ggtggcatttcacatgggaaaggttaatcctttcccaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 28223887  T
Q  226 aacactaga-ttttcttcacactatcttccaa 256  Q
    ||||||||| ||||| ||||||||||||||||    
T  28223888 aacactagatttttcgtcacactatcttccaa 28223919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 39477398 - 39477279
Alignment:
Q  139 atgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttt 237  Q
    |||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||    
T  39477398 atgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttt 39477299  T
Q  238 tcttcacactatcttccaac 257  Q
    ||||||||||||||||||||    
T  39477298 tcttcacactatcttccaac 39477279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 10883298 - 10883419
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| |||  |||||||||||||||||| |||||| |||||||||| |    
T  10883298 acatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctcaacactagatt 10883397  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  10883398 tttcttcacactatcttccaac 10883419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 11256127 - 11256248
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  |||| |||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  11256127 acatgggaaaggttaatcatttctcaccatggtaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 11256226  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  11256227 tttcttcacactatcttccaac 11256248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 6849628 - 6849497
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    ||||||||||||||||| ||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| |||||||||||| |||||| ||||||      
T  6849628 ggtggcattttacatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgctctctt 6849529  T
Q  226 aacactaga-ttttcttcacactatcttccaa 256  Q
    ||||||||| ||||||||||||||| ||||||    
T  6849528 aacactagatttttcttcacactattttccaa 6849497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 28224463 - 28224342
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||| | |    
T  28224463 acatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactaaatt 28224364  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  28224363 tttcttcacactatcttccaac 28224342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 3595981 - 3595849
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||||||| ||||||  |||  || |||| |||||||||||||||| ||||||| ||| ||| ||||||||||||||| |||||| |    
T  3595981 ggtgacatttcacatgggaaatgttaatcctttttcatcatggaaaagttggattcaatgattagattaagtgaaaaacatattcttaacatgctctctc 3595882  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  3595881 aacactagatttttcttcacactatcttccaac 3595849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 7583143 - 7583263
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||| ||||| ||||||  ||||||||||||| ||| ||||||||||| ||||||| | | ||||||||||||||||||| |||||| |||||||||| |    
T  7583143 acatcggaaaggttaatcctttcccaccatgagaaaattggattcaatgattagattaggtgaagaacatattcttaacatgctctctcaacactagatt 7583242  T
Q  236 tttcttcacactatcttccaa 256  Q
    |||||||||||||||||||||    
T  7583243 tttcttcacactatcttccaa 7583263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 238
Target Start/End: Original strand, 7716671 - 7716783
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||  |    
T  7716671 ggtggcatttcacatgggaaatgttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttc 7716770  T
Q  226 aacactagatttt 238  Q
    |||||||||||||    
T  7716771 aacactagatttt 7716783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 8113383 - 8113255
Alignment:
Q  129 ggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaac 228  Q
    ||||||| |||||||||| ||||||  ||| ||||||||  |||||||||||| || ||||||| | | ||||||||||||||||||| |||||| ||||    
T  8113383 ggcatttcacatgggaaaggttaatccttttccaccatgggaaagttggattcgatgattagattatgtgaagaacatattcttaacatgctctctcaac 8113284  T
Q  229 actaga-ttttcttcacactatcttccaa 256  Q
    |||||| ||||||||||||||||||||||    
T  8113283 actagatttttcttcacactatcttccaa 8113255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 30161933 - 30162065
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| || ||||||||||||||  ||||||| |||| |||||||||||||||| ||||||| ||| |||||||||||||||||||  ||||  |    
T  30161933 ggtggcatttcacgtgggaaaagttaatcctttcccatcatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatactctttc 30162032  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    |||| |||| ||||||||||| |||||||||||    
T  30162033 aacattagatttttcttcacattatcttccaac 30162065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 6849299 - 6849420
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| |||||||||||| |||||| | |||| |||||||||| |    
T  6849299 acatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgttctctcaacactagatt 6849398  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||| ||||    
T  6849399 tttcttcacactatctttcaac 6849420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 16887594 - 16887715
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  | ||||||||||||| ||||||| ||| ||||||||||||||||||| | ||||  ||||||||| |    
T  16887594 acatgggaaaggttaatcctttcccaccatgggatagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctgaacactagatt 16887693  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  16887694 tttcttcacactatcttccaac 16887715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 33847873 - 33848005
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| |  |||  ||| ||||||||  |||| ||||||||| |||||||| ||| ||||||||||||||||||| |||||| |    
T  33847873 ggtggcatttcacatgggaaaggccaatccttttccaccatgggaaagatggattcaacaattagattaagtgaagaacatattcttaacatgctctctc 33847972  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||| | |||||||||||||||||||||||    
T  33847973 aacactatatttttcttcacactatcttccaac 33848005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 20243583 - 20243685
Alignment:
Q  156 tttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttcc 254  Q
    ||||||||||||  ||||||||||||||| ||||||| ||| |||||| |||||||||||| | |||| ||||| |||| ||||||||||||||||||||    
T  20243583 tttcccaccatgggaaagttggattcaatgattagattaagtgaagaatatattcttaacatgttctctcaacattagatttttcttcacactatcttcc 20243682  T
Q  255 aac 257  Q
    |||    
T  20243683 aac 20243685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 16571801 - 16571680
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||| ||||  ||| ||||||||||| ||||||| ||| ||||||||||||||||||| |||||| ||||| |||| |    
T  16571801 acatgggaaaggttaatcctttcccatcatgggaaaattggattcaatgattagatcaagtgaagaacatattcttaacatgctctctcaacattagatt 16571702  T
Q  236 tttcttcacactatcttccaac 257  Q
    |||||| |||||| ||||||||    
T  16571701 tttcttaacactaccttccaac 16571680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 17918720 - 17918639
Alignment:
Q  177 gattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  17918720 gattcaattattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaac 17918639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 8963504 - 8963636
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||| | | ||||  ||||||||||||||| ||||||| ||| ||| |||||||| |||||| |||||| |    
T  8963504 ggtggcatttcacatgggaaaggttaatccttttctatcatgggaaagttggattcaatgattagattaagtgaaaaacatatttttaacatgctctctc 8963603  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| ||||||| ||| |||||||||||    
T  8963604 aacactagatttttctttacattatcttccaac 8963636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 467139 - 467237
Alignment:
Q  160 ccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||  ||||||||||||||| |||| || ||| ||||||||||||||||||| | |||| |||||||||| |||||||||||||||| ||||||    
T  467139 ccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattcttaacatggtctctcaacactagatttttcttcacactatcatccaac 467237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 7717359 - 7717243
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  |||| |||||||  ||||||| ||||||| |||| || ||| ||||||||||||||||||| | |||| |||||||||| |    
T  7717359 acatgggaaaggttaatcctttctcaccatgggaaagttg-attcaatgattatattaagtgaagaacatattcttaacatgttctctcaacactagatt 7717261  T
Q  236 tttcttcacactatcttc 253  Q
    ||||||||||||||||||    
T  7717260 tttcttcacactatcttc 7717243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 39476545 - 39476647
Alignment:
Q  156 tttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttcc 254  Q
    |||||||| |||  ||||||  ||||||| ||||||| ||| |||||| |||||||||||| | |||| |||||||||| ||||||||||||||||||||    
T  39476545 tttcccactatgggaaagtttaattcaatgattagattaagtgaagaatatattcttaacatgatctctcaacactagatttttcttcacactatcttcc 39476644  T
Q  255 aac 257  Q
    |||    
T  39476645 aac 39476647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 467412 - 467295
Alignment:
Q  141 gggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttc 239  Q
    |||||| ||||||  ||| ||||| ||||||||||| |||||||||||| || ||| ||||||||||||||||||| | |||| ||| | |||| |||||    
T  467412 gggaaaggttaatcattttccaccgtgaaaaagttgaattcaataattaaattaagtgaagaacatattcttaacatgttctctcaatattagatttttc 467313  T
Q  240 ttcacactatcttccaac 257  Q
    |||| |||||||| ||||    
T  467312 ttcaaactatctttcaac 467295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 8112691 - 8112809
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||| |||| ||||||  |||| |||||||  ||||||||||||||| ||||||| |||    ||||||||| |||||| | |||| |||||||||| |    
T  8112691 acatgagaaatgttaatcctttctcaccatgggaaagttggattcaatgattagattaag---tgaacatatttttaacatgttctctcaacactagatt 8112787  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  8112788 tttcttcacactatcttccaac 8112809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 17918064 - 17918153
Alignment:
Q  169 aaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||| |||||||| ||||||| ||| |||||| |||||||||||| | |||| |||||||||| |||| ||||||||||||| ||||    
T  17918064 aaaagttagattcaatgattagattaagtgaagaatatattcttaacatgttctctcaacactagatttttattcacactatctttcaac 17918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 40165907 - 40165979
Alignment:
Q  160 ccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacacta 232  Q
    ||||||||  ||||||||||||||| ||| ||| ||| ||||||||||||||||||| |||||  ||||||||    
T  40165907 ccaccatgggaaagttggattcaatgattggattaagtgaagaacatattcttaacatgctctttcaacacta 40165979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 40166918 - 40166803
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||| ||||| ||||||  ||||||||||||  ||| ||||||||||| ||||||| |||  ||||||||||| |||||| |      |||||||||| |    
T  40166918 acataggaaaggttaatcctttcccaccatgggaaaattggattcaatgattagattaagtcaagaacatatttttaacatg------caacactagatt 40166825  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||| ||||||||||||||||||    
T  40166824 ttttttcacactatcttccaac 40166803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 18949909 - 18949950
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatg 167  Q
    |||||||||| ||||||||||||||||| ||||| |||||||    
T  18949909 ggtggcatttcacatgggaaaagttaatcttttctcaccatg 18949950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 5e-38; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 36682835 - 36682967
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  36682835 ggtggcatttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 36682934  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  36682935 aacactagatttttcttcacactatcttccaac 36682967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 46732567 - 46732699
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||| |||||||| ||| |||||||||||||||| ||||||| ||| ||| |||||||||||||||  ||||| |    
T  46732567 ggtggcatttcacatgggaaaggttaattctttcccactatggaaaagttggattcaatgattagattaagtgaataacatattcttaacattctctctc 46732666  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  46732667 aacactagatttttcttcacactatcttccaac 46732699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 47813971 - 47814103
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |  ||||||| ||||||  |||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  47813971 ggtggcatttcatgtgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 47814070  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  47814071 aacactagatttttcttcacactatcttccaac 47814103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 30711799 - 30711916
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||| ||| |||||||||||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| ||||| |||| |    
T  30711799 acatggaaaaggttaattttttcccaccatggaaaagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaacattagatt 30711898  T
Q  236 tttcttcacactatcttc 253  Q
    ||||||||||||||||||    
T  30711899 tttcttcacactatcttc 30711916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 4895165 - 4895037
Alignment:
Q  129 ggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaac 228  Q
    ||||||| |||||||||| ||||||  ||| ||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| ||||    
T  4895165 ggcatttcacatgggaaaggttaatcattttccaccatgggaaagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaac 4895066  T
Q  229 actaga-ttttcttcacactatcttccaa 256  Q
    |||||| ||||||||||||||||||||||    
T  4895065 actagatttttcttcacactatcttccaa 4895037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 27855566 - 27855697
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||| ||||||| ||||||| ||||||| ||| |||||||||||||||| || |||||| |    
T  27855566 ggtggcatttcacatgggaaaggttaatcatttcccaccatgagaaagttg-attcaatgattagattaagtgaagaacatattcttatcatgctctctc 27855664  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  27855665 aacactagatttttcttcacactatcttccaac 27855697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 36683539 - 36683418
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| |||||||||||| |||||| |||||| |||||||||| |    
T  36683539 acatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgctctctcaacactagatt 36683440  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  36683439 tttcttcacactatcttccaac 36683418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 125 - 257
Target Start/End: Complemental strand, 46815148 - 46815016
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||  ||||||||||||||| ||||||| ||  ||||||||||||||||||| ||||||     
T  46815148 tggtggcatttcacatgg-aaaagttaattatttcccaccatgggaaagttggattcaatgattagattaaatgaagaacatattcttaacatgctctct 46815050  T
Q  225 caacactaga-ttttcttcacactatcttccaac 257  Q
    ||||| |||| ||||||| |||||||||||||||    
T  46815049 caacattagatttttcttaacactatcttccaac 46815016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 42455920 - 42456052
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||||||| ||||||  |||||||||| |  ||| ||||||||||| |||| || ||| ||||||||||||||||||| ||||||     
T  42455920 tggtggcatttcacatgggaaaggttaatcctttcccaccacgggaaaattggattcaatgattaaattaagtgaagaacatattcttaacatgctctct 42456019  T
Q  225 caacactaga-ttttcttcacactatcttccaa 256  Q
    |||||||||| ||||||||||||||||||||||    
T  42456020 caacactagatttttcttcacactatcttccaa 42456052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 32499936 - 32499827
Alignment:
Q  148 gttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactagattttcttcacact 247  Q
    ||||||| |||||||| | |  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  32499936 gttaattctttcccacaacgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttttcacact 32499837  T
Q  248 atcttccaac 257  Q
    ||||||||||    
T  32499836 atcttccaac 32499827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 34853402 - 34853523
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||| ||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  34853402 acatgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgatctctcaacactagatt 34853501  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  34853502 tttcttcacactatcttccaac 34853523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 47814710 - 47814589
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||||||||  |||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  47814710 acatgggaaagcttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 47814611  T
Q  236 tttcttcacactatcttccaac 257  Q
    |||||||||||||| |||||||    
T  47814610 tttcttcacactattttccaac 47814589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 256
Target Start/End: Complemental strand, 24044118 - 24043998
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||  ||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  24044118 acatgggaaaggttaatcctttcccaccatgggaaagttttattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 24044019  T
Q  236 tttcttcacactatcttccaa 256  Q
    |||||||||||||||||||||    
T  24044018 tttcttcacactatcttccaa 24043998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 22276156 - 22276030
Alignment:
Q  132 attttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacact 231  Q
    ||||||||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||  |||||||||||| |||||| |||||  |||||||    
T  22276156 attttacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaaatgaagaacatatttttaacatgctctttcaacact 22276057  T
Q  232 aga-ttttcttcacactatcttccaac 257  Q
    ||| |||||||||||||||||| ||||    
T  22276056 agatttttcttcacactatctttcaac 22276030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 19816275 - 19816396
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| | | ||||||||||||||| |||||| |||||||||| |    
T  19816275 acatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgtaaaacatattcttaacatgctctctcaacactagatt 19816374  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||| ||||    
T  19816375 tttcttcacactatctttcaac 19816396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 4894515 - 4894631
Alignment:
Q  142 ggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttct 240  Q
    ||||| ||||||  ||||||||||||  ||||||| ||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| ||||||    
T  4894515 ggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatttttct 4894614  T
Q  241 tcacactatcttccaac 257  Q
    |||||||||||||||||    
T  4894615 tcacactatcttccaac 4894631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 34854082 - 34853950
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||||||| ||||||  |||||||||||   |||||| || ||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  34854082 ggtgccatttcacatgggaaaggttaatcctttcccaccataggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctctc 34853983  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| ||||||||||| |||||||||||    
T  34853982 aacactagatttttcttcacaatatcttccaac 34853950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 257
Target Start/End: Original strand, 46814413 - 46814537
Alignment:
Q  134 tttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactag 233  Q
    ||||||||||||| ||||||  ||||||||||||  ||||||| ||||||  ||||||| ||| ||||||||||||||||||| |||||  ||||| |||    
T  46814413 tttacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaacgattagattaagtgaagaacatattcttaacatgctctttcaacattag 46814512  T
Q  234 a-ttttcttcacactatcttccaac 257  Q
    | |||||||||||||||||||||||    
T  46814513 atttttcttcacactatcttccaac 46814537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 257
Target Start/End: Complemental strand, 19816975 - 19816846
Alignment:
Q  129 ggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaac 228  Q
    ||||||| | |||||||| ||||||  ||| ||||||||  ||||||||||| ||| ||||||| ||| |||||||||||| |||||| |||||| ||||    
T  19816975 ggcatttcatatgggaaaggttaatccttttccaccatgggaaagttggattaaatgattagattaagtgaagaacatatttttaacatgctctctcaac 19816876  T
Q  229 actaga-ttttcttcacactatcttccaac 257  Q
    |||||| ||||||||||||||| |||||||    
T  19816875 actagatttttcttcacactatattccaac 19816846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 42456591 - 42456470
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||||||||  ||||||||||||||| |||| || ||| |||||||||||| |||||| | |||| |||||| ||| |    
T  42456591 acatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattacattaagtgaagaacatatttttaacatgttctctcaacacaagatt 42456492  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  42456491 tttcttcacactatcttccaac 42456470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 32499293 - 32499380
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaa 256  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||    
T  32499293 aaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcatcacactatcttccaa 32499380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 33806003 - 33806101
Alignment:
Q  160 ccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||| |||||||||||||||| |||| || ||| ||||||||||||||||||| |||||  |||||||||| |||||||| ||||||||||||||    
T  33806003 ccaccatggaaaagttggattcaatgattaaattaagtgaagaacatattcttaacatgctctttcaacactagatttttcttcgcactatcttccaac 33806101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 22275436 - 22275552
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||| ||| ||||||  ||||||||||||  ||||||| ||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  22275436 acatggaaaaggttaatcatttcccaccatgggaaagttg-attcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatt 22275534  T
Q  236 tttcttcacactatcttc 253  Q
    ||||||||||||||||||    
T  22275535 tttcttcacactatcttc 22275552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 24324056 - 24323936
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  |||||||| |||  ||| ||||||||||||||||||| ||| ||||||||||||||||||| | ||||  ||||||||| |    
T  24324056 acatgggaaaggttaatcatttcccactatgggaaa-ttggattcaataattagattaagtgaagaacatattcttaacatgttctctgaacactagatt 24323958  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||| ||||||||||||||    
T  24323957 tttcttctcactatcttccaac 24323936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 18520901 - 18520989
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||  |||||||||| |||||||||||||||||| ||||    
T  18520901 aaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctttcaacactagatttttcttcacactatctttcaac 18520989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 36620780 - 36620694
Alignment:
Q  172 agttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||||| ||||||| ||| |||||||||||| |||||| |||| | |||||||||| ||||||| |||||||||||||||    
T  36620780 agttggattcaatgattagattaagtgaagaacatattattaacatgctcactcaacactagatttttctttacactatcttccaac 36620694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 36620118 - 36620250
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| | |||||||| |||||| |||| | | ||||| ||||||| ||||||| |||| || ||| ||| |||||||| |||||| |||||  |    
T  36620118 ggtggcatttcatatgggaaaggttaatctttttctatcatgagaaagttgaattcaatgattaaattaagtgaaaaacatattattaacatgctctttc 36620217  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||| |||||| |||||||||||    
T  36620218 aacactagattttttttcacaatatcttccaac 36620250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 46012978 - 46012894
Alignment:
Q  174 ttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga--ttttcttcacactatcttccaac 257  Q
    ||||||||||| ||||||| ||| |||||||||||| |||||| |||||| ||||||||||  |||||||||||||||||| ||||    
T  46012978 ttggattcaatgattagattaagtgaagaacatatt-ttaacatgctctctcaacactagattttttcttcacactatctttcaac 46012894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 27856157 - 27856097
Alignment:
Q  198 gaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||||||||||| | |||| |||||||||| |||||||||||||| || |||||    
T  27856157 gaagaacatattcttaacatgttctctcaacactagatttttcttcacactaactaccaac 27856097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 51248556 - 51248437
Alignment:
Q  139 atgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttt 237  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||||||||||| ||| |||||||||||||||||||  ||||| |||||||||| |||    
T  51248556 atgggaaaggttaattttttcccaccatggaaaagtttgattcaataattagattaagtgaagaacatattcttaacatactctctcaacactagatttt 51248457  T
Q  238 tcttcacactatcttccaac 257  Q
    ||||||||||||||||||||    
T  51248456 tcttcacactatcttccaac 51248437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 128 - 257
Target Start/End: Complemental strand, 27817088 - 27816958
Alignment:
Q  128 tggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaa 227  Q
    |||||||| ||||||| || ||||||  |||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||| ||||| |||||| |||    
T  27817088 tggcatttcacatgggtaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcctaacatgctctctcaa 27816989  T
Q  228 cactaga-ttttcttcacactatcttccaac 257  Q
    ||||||| |||||||||||||||||||||||    
T  27816988 cactagatttttcttcacactatcttccaac 27816958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 43368910 - 43368789
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||| ||||||||||||  ||||||| ||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  43368910 acatgggaaaggttaattctttcccaccatgggaaagttgtattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatt 43368811  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  43368810 tttcttcacactatcttccaac 43368789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 49534482 - 49534350
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  |||||||||||| |||||||||||||||| ||||||| |||  || |||||||||||| || |||||| |    
T  49534482 ggtggcatttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagttaaaaacatattcttatcatgctctctc 49534383  T
Q  226 aacacta-gattttcttcacactatcttccaac 257  Q
    ||||||| | |||||||||||||||||||||||    
T  49534382 aacactaggtttttcttcacactatcttccaac 49534350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 1403040 - 1403172
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||| ||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||  |    
T  1403040 ggtggcatttcacatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttc 1403139  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    || |||||| |||||||||||||||||| ||||    
T  1403140 aatactagatttttcttcacactatctttcaac 1403172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 6288290 - 6288158
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  |||| ||||||| | |||||||||||||| ||||||| ||| ||||||||||||||||||| |||||  |    
T  6288290 ggtggcatttcacatgggaaaggttaatcctttctcaccatggagaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttc 6288191  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||| | |||||||| ||||||||||||||    
T  6288190 aacactaaatttttcttcccactatcttccaac 6288158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 42839620 - 42839502
Alignment:
Q  140 tgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-tttt 238  Q
    ||||||| ||||||  ||||||||||||  ||||||| ||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| ||||    
T  42839620 tgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgatctctcaacactagattttt 42839521  T
Q  239 cttcacactatcttccaac 257  Q
    |||||||||||||||||||    
T  42839520 cttcacactatcttccaac 42839502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 49533773 - 49533874
Alignment:
Q  156 tttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttcc 254  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||    
T  49533773 tttcccaccacgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcc 49533872  T
Q  255 aa 256  Q
    ||    
T  49533873 aa 49533874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 42838937 - 42839069
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||| ||| ||||||  ||||||||||||  |||||| || ||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  42838937 ggtgccatttcacatggtaaaggttaatcctttcccaccatgggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctctc 42839036  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| ||||||||||| |||||||||||    
T  42839037 aacactagatttttcttcacaatatcttccaac 42839069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 41563833 - 41563746
Alignment:
Q  171 aagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  41563833 aagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaac 41563746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 8560817 - 8560701
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  |||||||||||| |||||||| ||||||| ||||||| ||| ||||||||||||||||||| | |||  |||||||||| |    
T  8560817 acatgggaaaggttaatcctttcccaccatggaaaagttg-attcaatgattagattaagtgaagaacatattcttaacatgttctttcaacactagatt 8560719  T
Q  236 tttcttcacactatcttc 253  Q
    ||||||||||||||||||    
T  8560718 tttcttcacactatcttc 8560701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 27797128 - 27797249
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||| ||| ||||||  ||||||||||||  || |||| ||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  27797128 acatggaaaaggttaatcctttcccaccatgggaaggttgaattcaatgattagattaagtgaagaacatattcttaacatgatctctcaacactagatt 27797227  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  27797228 tttcttcacactatcttccaac 27797249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 8560156 - 8560288
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||| ||||||||  || |||||||||||  ||||||| ||| ||||||||||||||||||| |||||  |    
T  8560156 ggtggcatttcacatgggaaaggttaatccttttccaccatgggaatgttggattcaaagattagattaagtgaagaacatattcttaacatgctctttc 8560255  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| ||||||||| |||||||| ||||    
T  8560256 aacactagatttttcttcatactatctttcaac 8560288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 27797822 - 27797690
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||||||| ||||||  ||| |||| |||  |||||| || ||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  27797822 ggtgccatttcacatgggaaaggttaatccttttccactatgggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctctc 27797723  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| ||||||||||| |||||||||||    
T  27797722 aacactagatttttcttcacaatatcttccaac 27797690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 42839712 - 42839832
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactagatt 236  Q
    |||||||||| ||||||  ||||||||||||  |||||| || ||||| || |||| ||| ||||||||||||||||||| |||||| |||||||| |||    
T  42839712 acatgggaaaggttaatcctttcccaccatgggaaagttagagtcaatgatcagattaagtgaagaacatattcttaacatgctctctcaacactaaatt 42839811  T
Q  237 ttcttcacactatcttccaac 257  Q
    || |||||| |||||||||||    
T  42839812 tttttcacaatatcttccaac 42839832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 48844004 - 48843916
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||    
T  48844004 aaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattagatttttcttcacactatcttccaac 48843916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 139 - 252
Target Start/End: Original strand, 41563192 - 41563306
Alignment:
Q  139 atgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttt 237  Q
    |||||||| ||||||| ||| | ||||||  ||||||||||||||| ||||||| ||  ||||||| ||||||||||| |||||| |||||||||| |||    
T  41563192 atgggaaatgttaattcttttctaccatgggaaagttggattcaattattagattaaatgaagaacgtattcttaacatgctctctcaacactagatttt 41563291  T
Q  238 tcttcacactatctt 252  Q
    |||||||||||||||    
T  41563292 tcttcacactatctt 41563306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 51247866 - 51247960
Alignment:
Q  164 catgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||| |||| ||||||||||| ||||||| ||| |||||| |||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  51247866 catggaaaaattggattcaatgattagattaagtgaagaatatattcttaacatgctctctcaacactagatttttcttcacactatcttccaac 51247960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 7219722 - 7219602
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||| ||||  ||| ||||||||||| ||||||| ||| ||||||||||||||||||| | ||||  ||||||||| |    
T  7219722 acatgggaaaggttaatcctttcccatcatgggaaa-ttggattcaatgattagattaagtgaagaacatattcttaacatgttctctaaacactagatt 7219624  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  7219623 tttcttcacactatcttccaac 7219602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 37725422 - 37725510
Alignment:
Q  169 aaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaa 256  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||| ||||||    
T  37725422 aaaagttggattcaatcattagattaagtgaagaacatattcttaacatactctctcaacactagatttttcttcacactattttccaa 37725510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 42840391 - 42840267
Alignment:
Q  134 tttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactag 233  Q
    ||||||||||||| ||||||  ||| |||| |||  ||||||| ||||||| ||||||| ||| |||||||||||| ||||||   |||| |||||||||    
T  42840391 tttacatgggaaaggttaatcattttccactatgggaaagttgaattcaatgattagattaagtgaagaacatatttttaacataatctctcaacactag 42840292  T
Q  234 a-ttttcttcacactatcttccaac 257  Q
    | |||||||||||||||||||||||    
T  42840291 atttttcttcacactatcttccaac 42840267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 48369526 - 48369614
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||||||| ||| ||| ||| ||||||||||||||||||| |||||  |||||||||| |||||||||||||||||||||||    
T  48369526 aaagttggattcaatgattggattaagtgaagaacatattcttaacatgctctttcaacactagatttttcttcacactatcttccaac 48369614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 52859863 - 52859740
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||| ||||||  ||||||| ||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||| ||| |    
T  52859863 acatgggaaaggttaatcctttccaaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacaccagatt 52859764  T
Q  236 tttctt--cacactatcttccaac 257  Q
    ||||||  ||||||||||||||||    
T  52859763 tttcttcacacactatcttccaac 52859740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 43368203 - 43368322
Alignment:
Q  139 atgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttt 237  Q
    |||||||| ||||||  ||||||||||||  || ||| |||||||| |||| || ||| ||||||||||||||||||| | ||||  ||||||||| |||    
T  43368203 atgggaaaggttaatcctttcccaccatgggaatgttagattcaatgattaaattaagtgaagaacatattcttaacatgttctcttaacactagatttt 43368302  T
Q  238 tcttcacactatcttccaac 257  Q
    ||||||||||||||||||||    
T  43368303 tcttcacactatcttccaac 43368322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 6287658 - 6287752
Alignment:
Q  164 catgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||| |  ||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |||||||||||||||||||||||    
T  6287658 catgaaaaagattaattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatttttcttcacactatcttccaac 6287752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 27934358 - 27934249
Alignment:
Q  148 gttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacac 246  Q
    ||||||| ||| ||| ||||  |||||||||| |||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||||||| |||    
T  27934358 gttaattcttttccaacatgggaaagttggat-caatgattagattaagagaagaacatattcttaacatgctctctcaacactagatttttcttcgcac 27934260  T
Q  247 tatcttccaac 257  Q
    |||||||||||    
T  27934259 tatcttccaac 27934249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 1403762 - 1403650
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||| ||||| ||||||  ||||||||||||  ||||||| ||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  1403762 acataggaaaggttaatcctttcccaccatgggaaagttg-attcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatt 1403664  T
Q  236 tttcttcacactat 249  Q
    ||||||||||||||    
T  1403663 tttcttcacactat 1403650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 48843591 - 48843712
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| |||||| ||||| ||||||   ||||||||||||||| |||| || ||| ||| ||||||||||||||| | |||| |||||||||| |    
T  48843591 acatgggaaaggttaatcttttcacaccataggaaagttggattcaatgattatattaagtgaataacatattcttaacatgttctctcaacactagatt 48843690  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||| || |||||    
T  48843691 tttcttcacactaactaccaac 48843712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 7219052 - 7219139
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaa 256  Q
    ||||||||||||||| ||||||| ||  |||||| |||||||||||| ||| || |||||||||| ||||||||||||||||||||||    
T  7219052 aaagttggattcaatgattagattaaatgaagaatatattcttaacatgctttctcaacactagatttttcttcacactatcttccaa 7219139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 249
Target Start/End: Complemental strand, 7782777 - 7782653
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| |  |||  ||||| ||||||  ||||||||||||||| ||| ||| ||| |||||||||||||||| || |||||  |    
T  7782777 ggtggcatttcacatgggaaaggccaatcctttcctaccatgggaaagttggattcaatgattggatcaagtgaagaacatattcttatcatgctctttc 7782678  T
Q  226 aacactaga-ttttcttcacactat 249  Q
    |||| |||| |||||||||||||||    
T  7782677 aacattagatttttcttcacactat 7782653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 52859193 - 52859281
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||||| |||||||| ||||||| ||  ||| ||||||||||||||| |||||| || || |||| ||||||| |||||||||||||||    
T  52859193 aaagttagattcaatgattagattaaatgaataacatattcttaacatgctctctcatcattagatttttctttacactatcttccaac 52859281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 11266 - 11397
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| |||||| |||||| ||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  11266 ggtggcatttcacatgggaaaggttaatcttttcc-accatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 11364  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  11365 aacactagatttttcttcacactatcttccaac 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 6032839 - 6032707
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| | |||| ||| |||||||||||| |||||||| |||||| |||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  6032839 ggtggcatttcatatggaaaaggttaattttttctcaccatgagaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctctc 6032740  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  6032739 aacactagatttttcttcacactatcttccaac 6032707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 5523932 - 5523800
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| |||||| ||||||||||||   |||||| |||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  5523932 ggtggcatttcacatgggaaaggttaatcttttcccaccattggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctctctc 5523833  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    || |||||| |||||||||||||||||||||||    
T  5523832 aagactagatttttcttcacactatcttccaac 5523800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 30611431 - 30611299
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| ||||| |||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||  ||||||||||||||||||| |||||| |    
T  30611431 ggtggcatttcacatgagaaatgttaatcctttcccaccatgggaaagttggattcaatgattagattaactgaagaacatattcttaacatgctctctc 30611332  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  30611331 aacactagatttttcttcacactatcttccaac 30611299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 33668221 - 33668353
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| |||| || ||| ||||||||||||||||| | |||||| |    
T  33668221 ggtggcatttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattcttaatatgctctctc 33668320  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  33668321 aacactagatttttcttcacactatcttccaac 33668353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 31723833 - 31723965
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||||| |||||||| ||||||  ||||| ||||||  ||| ||||||| ||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  31723833 ggtggcattttatatgggaaaggttaatcctttcctaccatgggaaatttggatttaatgattagattaagtgaagaacatattcttaacatgctctctc 31723932  T
Q  226 aacactag-attttcttcacactatcttccaac 257  Q
    | |||||| ||||||||||||||||||||||||    
T  31723933 agcactagaattttcttcacactatcttccaac 31723965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 127 - 257
Target Start/End: Complemental strand, 12809787 - 12809656
Alignment:
Q  127 gtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccca 226  Q
    ||||||||| |||||||||| ||||||  |||||||   ||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||  ||    
T  12809787 gtggcatttcacatgggaaaggttaatcctttcccatggtgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttca 12809688  T
Q  227 acactaga-ttttcttcacactatcttccaac 257  Q
    |||||||| |||||||||||||||||||||||    
T  12809687 acactagatttttcttcacactatcttccaac 12809656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 5523211 - 5523332
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||| |||||||   ||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  5523211 acatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatt 5523310  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  5523311 tttcttcacactatcttccaac 5523332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 6032169 - 6032290
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  |||||||| |||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||| ||| |||||| |    
T  6032169 acatgggaaaggttaatcctttcccactatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaagactagatt 6032268  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  6032269 tttcttcacactatcttccaac 6032290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 257
Target Start/End: Complemental strand, 13936727 - 13936594
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||| ||||| |||||||||| ||||||  ||||||||||||  |||||| || ||||| ||||||| |||  |||||||||||||||||| ||||||     
T  13936727 tggtgccatttcacatgggaaaggttaatcctttcccaccatgggaaagttagagtcaatgattagattaagtaaagaacatattcttaacatgctctct 13936628  T
Q  225 caacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||| ||||||||||| |||||||||||    
T  13936627 caacactagatttttcttcacaatatcttccaac 13936594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 138 - 257
Target Start/End: Original strand, 30610723 - 30610843
Alignment:
Q  138 catgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-tt 236  Q
    ||||||||| ||||||  ||| ||||||||  ||| ||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| ||    
T  30610723 catgggaaaggttaatcattttccaccatgggaaaattggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagattt 30610822  T
Q  237 ttcttcacactatcttccaac 257  Q
    ||||| |||||||||||||||    
T  30610823 ttcttgacactatcttccaac 30610843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 12809080 - 12809201
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  |||||||| ||   |||||||||| |||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  12809080 acatgggaaaggttaatcctttcccactataggaaagttggatgcaatgattagattaagtgaagaacatattcttaacaagttctctcaacactagatt 12809179  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  12809180 tttcttcacactatcttccaac 12809201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 13944303 - 13944422
Alignment:
Q  139 atgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttt 237  Q
    ||||||||  |||||  ||||||| ||||  ||||||| ||||||| ||||||| ||  ||||||||||||||||||| | |||| |||||||||| |||    
T  13944303 atgggaaagattaatcatttcccatcatgggaaagttgaattcaatgattagattaaatgaagaacatattcttaacatgatctctcaacactagatttt 13944402  T
Q  238 tcttcacactatcttccaac 257  Q
    ||||||||||||||||||||    
T  13944403 tcttcacactatcttccaac 13944422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 33668905 - 33668785
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||| ||||| ||||||  |||||||||||  |||||||||||||||| ||||||| ||| |||||| ||||| |||||| | | || |||||||||| |    
T  33668905 acattggaaatgttaatcatttcccaccatagaaaagttggattcaatgattagattaagtgaagaatatatttttaacatg-tttctcaacactagatt 33668807  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  33668806 tttcttcacactatcttccaac 33668785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 33648245 - 33648117
Alignment:
Q  130 gcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaaca 229  Q
    |||||| |||||||||| || |||| |||| ||||||   ||| ||||||||||| |||  || ||| |||||| |||||||||||  | |||  |||||    
T  33648245 gcatttcacatgggaaaggtcaattctttcacaccataggaaaattggattcaatgattgaattaagtgaagaatatattcttaacgtgttctttcaaca 33648146  T
Q  230 ctaga-ttttcttcacactatcttccaac 257  Q
    ||||| |||||||||||||||||||||||    
T  33648145 ctagatttttcttcacactatcttccaac 33648117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 31724491 - 31724403
Alignment:
Q  170 aaagttggattcaataatta-gatgaagcgaagaacatattcttaacacgctctcccaacactagatttt-cttcacactatcttccaa 256  Q
    ||||||||||||||| |||  ||| ||| |||||| |||||||||||| |||||  |||||| ||||||| ||||||||||||||||||    
T  31724491 aaagttggattcaatgattttgattaagtgaagaatatattcttaacatgctctttcaacacaagatttttcttcacactatcttccaa 31724403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 8e-34; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 125 - 257
Target Start/End: Original strand, 3957499 - 3957632
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||||||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||| | | ||||     
T  3957499 tggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaatatgttctct 3957598  T
Q  225 caacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||| |||||||||||||||||||||||    
T  3957599 caacactagatttttcttcacactatcttccaac 3957632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 4928882 - 4929003
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||||||||||  |||||||||||  |||||||||||| ||| ||||||| ||| ||||||||||||||||||| | |||| |||||||||| |    
T  4928882 acatgggaaaagttaatcctttcccaccatagaaaagttggatttaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatt 4928981  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  4928982 tttcttcacactatcttccaac 4929003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 33430042 - 33430173
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||| ||| ||||||  ||||| |||||| ||| |||||||||||| ||||||| ||| ||||||||||||||||||| ||||||     
T  33430042 tggtggcatttcacatggaaaaggttaatcctttcctaccatggaaa-gttggattcaatgattagattaagtgaagaacatattcttaacatgctctct 33430140  T
Q  225 caacactaga-ttttcttcacactatcttccaa 256  Q
    |||||||||| |||||||| |||||||||||||    
T  33430141 caacactagatttttcttcgcactatcttccaa 33430173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 126 - 248
Target Start/End: Complemental strand, 5324489 - 5324366
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||||||| ||||||| ||||  ||||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |    
T  5324489 ggtgacatttcacatgggaaaggttaattctttcataccatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 5324390  T
Q  226 aacactaga-ttttcttcacacta 248  Q
    ||||||| | ||||||||||||||    
T  5324389 aacactaaatttttcttcacacta 5324366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 42408613 - 42408519
Alignment:
Q  164 catgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||| |||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  42408613 catggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaac 42408519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 3739738 - 3739617
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||| |||||| |||||  ||||| || |||| ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  3739738 acataggaaaacttaatcctttcctactatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatt 3739639  T
Q  236 tttcttcacactatcttccaac 257  Q
    |||||||||||||| |||||||    
T  3739638 tttcttcacactattttccaac 3739617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 4929593 - 4929464
Alignment:
Q  125 tggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcc 224  Q
    ||||||||||| |||||||||| ||||||  ||| ||||||||  ||||||||||||||| ||||||| ||| |||||| ||||| |||||| ||||||     
T  4929593 tggtggcatttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaatatatttttaacatgctctct 4929494  T
Q  225 caacactaga-ttttcttcacactatcttc 253  Q
    |||||||||| |||||||| ||||||||||    
T  4929493 caacactagatttttcttcgcactatcttc 4929464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 28076055 - 28075923
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||| ||| ||||||  ||| ||||||||  ||||||||||||||| ||||||| ||| ||| || |||||||||||| |||||| |    
T  28076055 ggtgacatttcacatggaaaaggttaatcattttccaccatgggaaagttggattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 28075956  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||| |||||||||||||||||||||||    
T  28075955 aacactagatttttcttcacactatcttccaac 28075923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 8813769 - 8813638
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| | |||||||| ||||||  ||| ||| ||||  ||||||||||||||| ||||||| |||  |||||||||||||||||| |||||| |    
T  8813769 ggtggcatttcatatgggaaaggttaatccttttccatcatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctc 8813670  T
Q  226 aacactagattt-tcttcacactatcttccaa 256  Q
     ||||||||||| |||||||||||||||||||    
T  8813669 tacactagatttgtcttcacactatcttccaa 8813638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 26687511 - 26687632
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||| | ||||||  |||||| |||||||| ||||||| ||| ||||||||||||||||||| |||||| ||||| |||| |    
T  26687511 acatgggaaaggttaatccttttctaccatgggaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattagatt 26687610  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  26687611 tttcttcacactatcttccaac 26687632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 26957242 - 26957363
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||| | ||||||  |||||| |||||||| ||||||| ||| ||||||||||||||||||| |||||| ||||| |||| |    
T  26957242 acatgggaaaggttaatccttttctaccatgggaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattagatt 26957341  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  26957342 tttcttcacactatcttccaac 26957363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 3958209 - 3958088
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    |||||||||| ||||||  ||||||| ||    |||||| |||||||||||||||| ||| |||||||||||| ||||||  ||||| |||||||| | |    
T  3958209 acatgggaaaggttaatcctttcccatcaatggaaagtttgattcaataattagattaagtgaagaacatatttttaacatactctctcaacactaaatt 3958110  T
Q  236 tttcttcacactatcttccaac 257  Q
    ||||||||||||||||||||||    
T  3958109 tttcttcacactatcttccaac 3958088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 26688092 - 26688010
Alignment:
Q  177 gattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga--ttttcttcacactatcttccaac 257  Q
    |||||||| |||| || ||| ||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||    
T  26688092 gattcaatgattatattaagtgaagaacatattcttaacatgctctctcaacactagattttttcttcacactatcttccaac 26688010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 26957823 - 26957741
Alignment:
Q  177 gattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga--ttttcttcacactatcttccaac 257  Q
    |||||||| |||| || ||| ||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||    
T  26957823 gattcaatgattatattaagtgaagaacatattcttaacatgctctctcaacactagattttttcttcacactatcttccaac 26957741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 3739044 - 3739132
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||||||| ||||||| ||| ||| || ||||||||||||  ||||| |||||||||| ||||||||||| |||||||||||    
T  3739044 aaagttggattcaatgattagattaagtgaaaaatatattcttaacatactctctcaacactagatttttcttcacaatatcttccaac 3739132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 21770045 - 21770130
Alignment:
Q  173 gttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||| | |||| ||||| || | ||||||||||||||| |||||||    
T  21770045 gttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacattaaatttttcttcacactatattccaac 21770130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 13738104 - 13738191
Alignment:
Q  170 aaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacactatcttccaac 257  Q
    ||||||||||||||| ||| ||| ||| ||||||||||||||| ||| | |||  |||||||||| |||||||||||||||||||||||    
T  13738104 aaagttggattcaatgattggattaagtgaagaacatattctttacatg-tctttcaacactagatttttcttcacactatcttccaac 13738191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 257
Target Start/End: Original strand, 42408014 - 42408124
Alignment:
Q  148 gttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-ttttcttcacac 246  Q
    |||||| ||||||||| |||  ||| ||||||||||| ||||||| ||  ||||||||||||||||||| | |||| ||| | |||| ||||||||| ||    
T  42408014 gttaatcttttcccactatgggaaaattggattcaatgattagattaaatgaagaacatattcttaacatgttctctcaatattagatttttcttcaaac 42408113  T
Q  247 tatcttccaac 257  Q
    |||||| ||||    
T  42408114 tatctttcaac 42408124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 8813134 - 8813187
Alignment:
Q  205 atattcttaacacgctctcccaacactagatttt-cttcacactatcttccaac 257  Q
    |||||||||||| | |||| |||||||| ||||| |||||||||||||||||||    
T  8813134 atattcttaacatgttctctcaacactatatttttcttcacactatcttccaac 8813187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 21770490 - 21770527
Alignment:
Q  138 catgggaaaagttaattttttcccaccatgaaaaagtt 175  Q
    |||||||||||||| || ||||||||||||||||||||    
T  21770490 catgggaaaagttagttgtttcccaccatgaaaaagtt 21770527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 15319 - 15187
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||||||||| |||||| ||| ||||||  ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||  |    
T  15319 ggtggcatttcacatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttc 15220  T
Q  226 aacactaga-ttttcttcacactatcttccaac 257  Q
    || |||||| |||||||||||||||||| ||||    
T  15219 aatactagatttttcttcacactatctttcaac 15187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 1496 - 1617
Alignment:
Q  137 acatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctcccaacactaga-t 235  Q
    ||||||||||  |||||  |||| ||||||| |||||||||||||||| ||||||| ||| ||| |||||||||||| || |||||| |||||||||| |    
T  1496 acatgggaaagcttaatcatttcgcaccatggaaaagttggattcaatgattagattaagtgaataacatattcttagcatgctctctcaacactagatt 1595  T
Q  236 tttcttcacactatcttccaac 257  Q
    |||||||||||||| |||||||    
T  1596 tttcttcacactattttccaac 1617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 11870 - 11739
Alignment:
Q  126 ggtggcattttacatgggaaaagttaattttttcccaccatgaaaaagttggattcaataattagatgaagcgaagaacatattcttaacacgctctccc 225  Q
    |||| ||||| |||||| ||| ||||||  ||||||||||||  |||||| || ||||| || |||| ||| ||||||||||||||||||| |||||| |    
T  11870 ggtgccatttcacatggtaaaggttaatcctttcccaccatgggaaagttagagtcaatgatcagattaagtgaagaacatattcttaacatgctctctc 11771  T
Q  226 aacactagattttcttcacactatcttccaac 257  Q
    ||||||| ||||| |||||| |||||||||||    
T  11770 aacactaaatttttttcacaatatcttccaac 11739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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