View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21518_high_6 (Length: 226)
Name: NF21518_high_6
Description: NF21518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21518_high_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 7861346 - 7861126
Alignment:
| Q |
6 |
acaattcgaccagttgagccataagtttatcttaactatggttcaattatgttgacgatttgattgttaactacgacattgatcacaattgtaacttagt |
105 |
Q |
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| T |
7861346 |
acaatttgaccagttgagccataagtttatcttaactatggttcaattatgttgacgatttgattgttaactacgacattgatcacaattgtaacttagt |
7861247 |
T |
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| Q |
106 |
tcaaatggtctaagatcattttaaagcattgatgtgagaaaacaagatcacattgaagtaaaaaatatatgctttataatcagaatcaggaaaacaacat |
205 |
Q |
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| T |
7861246 |
tcaaatggtctaagatcattttaaagcattgatgtgagaaaacaagatcacattgaagtaaaaaatatatgctttataatcagaatcaggaaaacaacat |
7861147 |
T |
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| Q |
206 |
ttggttctcataagaacttaa |
226 |
Q |
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| T |
7861146 |
ttggttctcataagaacttaa |
7861126 |
T |
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