View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21519_high_7 (Length: 239)

Name: NF21519_high_7
Description: NF21519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21519_high_7
NF21519_high_7
[»] chr3 (71 HSPs)
chr3 (32-108)||(6458377-6458453)
chr3 (18-108)||(6758383-6758471)
chr3 (109-151)||(6458026-6458068)
chr3 (109-151)||(6758780-6758822)
chr3 (200-239)||(6784463-6784502)
chr3 (200-239)||(26058546-26058585)
chr3 (47-99)||(49962112-49962168)
chr3 (205-239)||(8546909-8546943)
chr3 (198-236)||(29454787-29454825)
chr3 (200-238)||(47066934-47066972)
chr3 (193-234)||(27687979-27688020)
chr3 (206-239)||(32467431-32467464)
chr3 (198-239)||(43868101-43868142)
chr3 (200-237)||(46878439-46878476)
chr3 (199-239)||(4759349-4759389)
chr3 (199-239)||(12050390-12050430)
chr3 (195-239)||(20862191-20862235)
chr3 (199-239)||(22103927-22103967)
chr3 (199-239)||(24087333-24087373)
chr3 (199-239)||(25149120-25149160)
chr3 (199-239)||(35868081-35868121)
chr3 (199-239)||(41392878-41392918)
chr3 (199-239)||(43978159-43978199)
chr3 (199-239)||(44543781-44543821)
chr3 (199-239)||(46845490-46845530)
chr3 (199-239)||(51284060-51284100)
chr3 (200-239)||(8321925-8321964)
chr3 (200-239)||(9499495-9499534)
chr3 (200-239)||(10220933-10220972)
chr3 (200-239)||(21756486-21756525)
chr3 (206-237)||(22527621-22527652)
chr3 (200-239)||(26593763-26593802)
chr3 (200-239)||(35165960-35165999)
chr3 (199-238)||(37728712-37728751)
chr3 (200-239)||(45252773-45252812)
chr3 (200-239)||(45324085-45324124)
chr3 (204-239)||(46703031-46703066)
chr3 (196-239)||(52177796-52177839)
chr3 (200-239)||(54604586-54604625)
chr3 (199-237)||(7181349-7181387)
chr3 (205-239)||(20918224-20918258)
chr3 (205-239)||(20927186-20927220)
chr3 (196-234)||(28875254-28875292)
chr3 (200-234)||(33360885-33360919)
chr3 (197-239)||(50433387-50433429)
chr3 (206-239)||(1572337-1572370)
chr3 (194-239)||(7051718-7051763)
chr3 (200-237)||(14428610-14428647)
chr3 (198-239)||(22832605-22832646)
chr3 (198-239)||(23700783-23700824)
chr3 (198-239)||(23719238-23719279)
chr3 (198-239)||(23737694-23737735)
chr3 (198-239)||(26221286-26221327)
chr3 (200-237)||(29719710-29719747)
chr3 (198-239)||(32963103-32963144)
chr3 (198-239)||(33868446-33868487)
chr3 (198-239)||(43701176-43701217)
chr3 (200-237)||(46049986-46050023)
chr3 (200-236)||(4024052-4024088)
chr3 (199-239)||(10656690-10656730)
chr3 (207-239)||(25148466-25148498)
chr3 (199-239)||(26306605-26306645)
chr3 (199-239)||(28673292-28673332)
chr3 (206-234)||(31186764-31186792)
chr3 (205-237)||(31397771-31397803)
chr3 (199-239)||(35572452-35572492)
chr3 (207-239)||(36098973-36099005)
chr3 (207-239)||(46862364-46862396)
chr3 (193-233)||(50647677-50647717)
chr3 (195-239)||(53164158-53164202)
chr3 (199-239)||(53361853-53361893)
[»] chr7 (45 HSPs)
chr7 (18-108)||(39677058-39677146)
chr7 (200-239)||(31457997-31458036)
chr7 (196-239)||(38858294-38858337)
chr7 (200-239)||(41003152-41003191)
chr7 (197-239)||(2290014-2290056)
chr7 (198-239)||(29286035-29286076)
chr7 (198-239)||(36698129-36698170)
chr7 (199-239)||(25950830-25950870)
chr7 (207-239)||(28060724-28060756)
chr7 (199-239)||(32814432-32814472)
chr7 (199-239)||(33858864-33858904)
chr7 (199-239)||(34012515-34012555)
chr7 (195-239)||(34979075-34979119)
chr7 (200-239)||(19920563-19920602)
chr7 (200-239)||(21295151-21295190)
chr7 (200-239)||(26255096-26255135)
chr7 (200-239)||(32872373-32872412)
chr7 (200-239)||(39197718-39197757)
chr7 (200-239)||(41026094-41026133)
chr7 (200-239)||(41252359-41252398)
chr7 (200-239)||(48521029-48521068)
chr7 (205-239)||(31769330-31769364)
chr7 (200-234)||(35569654-35569688)
chr7 (199-237)||(39871613-39871651)
chr7 (200-238)||(44719127-44719165)
chr7 (198-239)||(8290901-8290942)
chr7 (206-239)||(9140531-9140564)
chr7 (200-237)||(12631816-12631853)
chr7 (195-236)||(24211149-24211190)
chr7 (199-236)||(33381574-33381611)
chr7 (109-150)||(39676719-39676760)
chr7 (198-239)||(44547424-44547465)
chr7 (198-239)||(46415003-46415044)
chr7 (195-239)||(6799545-6799588)
chr7 (207-239)||(11647832-11647864)
chr7 (199-239)||(12616381-12616421)
chr7 (197-233)||(20075111-20075147)
chr7 (207-239)||(26299323-26299355)
chr7 (198-234)||(27813494-27813530)
chr7 (207-239)||(28016543-28016575)
chr7 (198-238)||(29177251-29177291)
chr7 (199-239)||(36646635-36646675)
chr7 (197-233)||(38858562-38858598)
chr7 (199-239)||(39135094-39135134)
chr7 (200-236)||(40300230-40300266)
[»] chr2 (43 HSPs)
chr2 (47-102)||(38176825-38176880)
chr2 (198-239)||(8841655-8841696)
chr2 (195-239)||(34062663-34062707)
chr2 (199-239)||(44573880-44573920)
chr2 (198-239)||(20252208-20252249)
chr2 (200-237)||(23788969-23789006)
chr2 (198-239)||(41450514-41450555)
chr2 (207-239)||(1859554-1859586)
chr2 (199-239)||(11201682-11201722)
chr2 (199-239)||(12360456-12360496)
chr2 (199-239)||(26322291-26322331)
chr2 (199-239)||(34883846-34883886)
chr2 (200-239)||(2438225-2438264)
chr2 (200-239)||(7491844-7491883)
chr2 (200-239)||(8716890-8716929)
chr2 (200-239)||(8912872-8912911)
chr2 (199-234)||(9701069-9701104)
chr2 (200-239)||(15404705-15404744)
chr2 (200-239)||(16669626-16669665)
chr2 (200-239)||(17408292-17408331)
chr2 (200-239)||(36131026-36131065)
chr2 (200-239)||(45628877-45628916)
chr2 (197-239)||(34113528-34113570)
chr2 (195-233)||(39833734-39833772)
chr2 (199-237)||(40607701-40607739)
chr2 (200-237)||(2060316-2060353)
chr2 (198-239)||(4711726-4711767)
chr2 (200-237)||(7116299-7116336)
chr2 (200-237)||(27560206-27560243)
chr2 (200-237)||(28566151-28566188)
chr2 (196-233)||(31751065-31751102)
chr2 (198-239)||(40680725-40680766)
chr2 (199-239)||(5664637-5664677)
chr2 (199-239)||(11865287-11865327)
chr2 (199-239)||(15228147-15228187)
chr2 (197-233)||(16108212-16108248)
chr2 (207-239)||(16456870-16456902)
chr2 (199-239)||(16805789-16805829)
chr2 (199-239)||(16845070-16845110)
chr2 (199-239)||(22897390-22897430)
chr2 (199-239)||(25624732-25624772)
chr2 (207-239)||(28840646-28840678)
chr2 (198-234)||(41422510-41422546)
[»] chr5 (40 HSPs)
chr5 (64-106)||(42633255-42633297)
chr5 (195-239)||(14913643-14913687)
chr5 (196-239)||(26894871-26894914)
chr5 (197-239)||(6673226-6673268)
chr5 (198-239)||(22527690-22527731)
chr5 (198-239)||(40004407-40004448)
chr5 (197-237)||(3028010-3028050)
chr5 (199-239)||(16127258-16127298)
chr5 (197-237)||(23260138-23260178)
chr5 (195-239)||(41384170-41384214)
chr5 (200-239)||(1265949-1265988)
chr5 (200-239)||(5527974-5528013)
chr5 (200-239)||(9828393-9828432)
chr5 (196-239)||(16440927-16440970)
chr5 (200-239)||(23286472-23286511)
chr5 (200-239)||(43060409-43060448)
chr5 (199-237)||(8949811-8949849)
chr5 (197-239)||(13759445-13759487)
chr5 (197-239)||(22657765-22657807)
chr5 (205-239)||(24308138-24308172)
chr5 (205-239)||(24365151-24365185)
chr5 (197-239)||(32147291-32147333)
chr5 (198-236)||(34662202-34662240)
chr5 (205-239)||(39984775-39984809)
chr5 (205-239)||(42561347-42561381)
chr5 (109-151)||(42632868-42632910)
chr5 (206-239)||(14789558-14789591)
chr5 (198-239)||(15190813-15190854)
chr5 (198-239)||(25601058-25601099)
chr5 (198-239)||(26605620-26605661)
chr5 (206-239)||(27873343-27873376)
chr5 (206-239)||(32478144-32478177)
chr5 (198-234)||(7940450-7940486)
chr5 (200-236)||(7951562-7951598)
chr5 (199-239)||(15521940-15521980)
chr5 (207-239)||(16153253-16153285)
chr5 (205-237)||(18251019-18251051)
chr5 (200-236)||(19571940-19571976)
chr5 (199-239)||(21239098-21239138)
chr5 (199-239)||(40643093-40643133)
[»] scaffold0012 (1 HSPs)
scaffold0012 (195-239)||(47635-47679)
[»] chr4 (48 HSPs)
chr4 (199-239)||(36391853-36391893)
chr4 (200-239)||(26866861-26866900)
chr4 (200-239)||(43387991-43388030)
chr4 (200-239)||(47228726-47228765)
chr4 (205-239)||(37352549-37352583)
chr4 (205-239)||(37357448-37357482)
chr4 (199-236)||(375423-375460)
chr4 (198-239)||(4035823-4035864)
chr4 (197-238)||(4415962-4416003)
chr4 (198-239)||(20455179-20455220)
chr4 (197-238)||(46949989-46950030)
chr4 (195-239)||(9328238-9328282)
chr4 (199-239)||(45742804-45742844)
chr4 (199-239)||(49793090-49793130)
chr4 (199-239)||(56432517-56432557)
chr4 (200-239)||(5375555-5375594)
chr4 (200-239)||(30771528-30771567)
chr4 (200-239)||(31937076-31937115)
chr4 (200-239)||(32032991-32033030)
chr4 (200-239)||(34273217-34273256)
chr4 (195-234)||(37776740-37776779)
chr4 (200-239)||(44294789-44294828)
chr4 (200-239)||(47806860-47806899)
chr4 (200-239)||(49373691-49373730)
chr4 (200-239)||(52977982-52978021)
chr4 (205-239)||(16545981-16546015)
chr4 (199-237)||(28501386-28501424)
chr4 (198-236)||(32899219-32899257)
chr4 (205-239)||(41620519-41620553)
chr4 (195-237)||(51335788-51335830)
chr4 (200-237)||(5743659-5743696)
chr4 (199-236)||(24073127-24073164)
chr4 (198-239)||(24754076-24754117)
chr4 (200-237)||(25124246-25124283)
chr4 (200-237)||(29520164-29520201)
chr4 (200-237)||(33413518-33413555)
chr4 (200-237)||(53564356-53564393)
chr4 (206-238)||(6083290-6083322)
chr4 (199-239)||(6807428-6807468)
chr4 (199-239)||(17610018-17610058)
chr4 (198-234)||(18872715-18872751)
chr4 (199-239)||(20768214-20768254)
chr4 (200-236)||(26626003-26626039)
chr4 (199-239)||(28298369-28298409)
chr4 (207-239)||(45097163-45097195)
chr4 (199-239)||(48030312-48030352)
chr4 (200-236)||(55563128-55563164)
chr4 (207-239)||(55876387-55876419)
[»] chr1 (43 HSPs)
chr1 (195-239)||(25509204-25509248)
chr1 (200-239)||(38261340-38261379)
chr1 (197-239)||(52431172-52431214)
chr1 (198-239)||(4102712-4102753)
chr1 (199-239)||(1427198-1427238)
chr1 (199-239)||(7763747-7763787)
chr1 (199-239)||(11741396-11741436)
chr1 (199-239)||(27037268-27037308)
chr1 (199-239)||(37951947-37951987)
chr1 (199-239)||(39497432-39497472)
chr1 (199-239)||(45039411-45039451)
chr1 (200-239)||(943635-943674)
chr1 (200-239)||(1039379-1039418)
chr1 (200-239)||(1046285-1046324)
chr1 (200-239)||(15811230-15811269)
chr1 (199-234)||(23530541-23530576)
chr1 (200-239)||(23541979-23542018)
chr1 (200-239)||(36694854-36694893)
chr1 (200-239)||(36710955-36710994)
chr1 (200-239)||(39363192-39363231)
chr1 (200-239)||(43456619-43456658)
chr1 (200-239)||(44649629-44649668)
chr1 (200-239)||(49907021-49907060)
chr1 (205-239)||(30289860-30289894)
chr1 (205-239)||(32169952-32169986)
chr1 (199-237)||(42276161-42276199)
chr1 (200-238)||(46075866-46075904)
chr1 (199-232)||(2279952-2279985)
chr1 (197-234)||(9413328-9413365)
chr1 (205-238)||(13343778-13343811)
chr1 (200-237)||(30290265-30290302)
chr1 (200-233)||(45039676-45039709)
chr1 (198-239)||(52601989-52602030)
chr1 (199-239)||(5765988-5766028)
chr1 (199-239)||(11907228-11907268)
chr1 (199-239)||(18237093-18237133)
chr1 (198-234)||(28885840-28885876)
chr1 (197-233)||(39362931-39362967)
chr1 (197-233)||(39750118-39750154)
chr1 (207-239)||(41855471-41855503)
chr1 (197-237)||(48853811-48853851)
chr1 (199-239)||(50246927-50246967)
chr1 (199-239)||(50937778-50937818)
[»] scaffold0339 (1 HSPs)
scaffold0339 (200-239)||(7138-7177)
[»] scaffold0308 (1 HSPs)
scaffold0308 (200-239)||(14346-14385)
[»] chr8 (40 HSPs)
chr8 (196-239)||(38781139-38781182)
chr8 (197-239)||(18754141-18754183)
chr8 (198-239)||(2152238-2152279)
chr8 (199-236)||(13568906-13568943)
chr8 (199-239)||(8251931-8251971)
chr8 (207-239)||(8797295-8797327)
chr8 (197-237)||(12802608-12802648)
chr8 (199-239)||(13153927-13153967)
chr8 (199-239)||(28572045-28572085)
chr8 (199-239)||(28579638-28579678)
chr8 (199-239)||(34568489-34568529)
chr8 (200-239)||(51093-51132)
chr8 (200-239)||(1774342-1774381)
chr8 (200-239)||(2944270-2944309)
chr8 (200-239)||(5162304-5162343)
chr8 (200-239)||(8951426-8951465)
chr8 (200-239)||(14699452-14699491)
chr8 (200-239)||(18641378-18641417)
chr8 (200-235)||(19176136-19176171)
chr8 (195-234)||(23487059-23487098)
chr8 (200-239)||(28192173-28192212)
chr8 (196-239)||(40529303-40529346)
chr8 (199-237)||(32675757-32675795)
chr8 (198-239)||(5593419-5593460)
chr8 (200-237)||(17069844-17069881)
chr8 (200-237)||(17578392-17578429)
chr8 (200-233)||(17856517-17856550)
chr8 (197-234)||(26016566-26016603)
chr8 (206-239)||(33865539-33865572)
chr8 (200-237)||(36786467-36786504)
chr8 (200-237)||(39029178-39029215)
chr8 (199-239)||(5774047-5774087)
chr8 (207-239)||(8948349-8948381)
chr8 (199-239)||(14584129-14584169)
chr8 (198-234)||(17856779-17856815)
chr8 (199-239)||(29598223-29598263)
chr8 (199-239)||(29806220-29806260)
chr8 (197-233)||(40530410-40530446)
chr8 (199-239)||(40784890-40784930)
chr8 (199-239)||(43654201-43654241)
[»] scaffold0122 (1 HSPs)
scaffold0122 (197-239)||(12062-12104)
[»] chr6 (28 HSPs)
chr6 (197-239)||(402619-402661)
chr6 (197-239)||(4844397-4844439)
chr6 (198-239)||(30248645-30248686)
chr6 (200-236)||(13648130-13648166)
chr6 (199-239)||(13901640-13901680)
chr6 (199-239)||(15498628-15498668)
chr6 (199-239)||(25045641-25045681)
chr6 (199-239)||(34915541-34915581)
chr6 (200-239)||(231103-231142)
chr6 (200-239)||(2090658-2090697)
chr6 (200-239)||(8743188-8743227)
chr6 (199-234)||(16272971-16273006)
chr6 (198-237)||(23604458-23604497)
chr6 (200-239)||(34301830-34301869)
chr6 (197-239)||(5576375-5576417)
chr6 (199-237)||(11161850-11161888)
chr6 (198-239)||(5457410-5457451)
chr6 (198-239)||(9341836-9341877)
chr6 (200-237)||(13011120-13011157)
chr6 (198-239)||(27581385-27581426)
chr6 (199-239)||(7772175-7772215)
chr6 (199-239)||(7847306-7847346)
chr6 (199-239)||(9388789-9388829)
chr6 (199-239)||(11847570-11847610)
chr6 (194-234)||(13321329-13321369)
chr6 (205-237)||(17227527-17227559)
chr6 (199-239)||(19097799-19097839)
chr6 (197-233)||(34741730-34741766)
[»] scaffold0029 (1 HSPs)
scaffold0029 (198-239)||(51680-51721)
[»] scaffold0008 (1 HSPs)
scaffold0008 (199-239)||(259120-259160)
[»] scaffold0674 (1 HSPs)
scaffold0674 (200-239)||(5151-5190)
[»] scaffold0604 (1 HSPs)
scaffold0604 (200-239)||(3780-3819)
[»] scaffold0549 (1 HSPs)
scaffold0549 (200-239)||(10180-10219)
[»] scaffold0240 (1 HSPs)
scaffold0240 (200-239)||(18497-18536)
[»] scaffold0161 (1 HSPs)
scaffold0161 (200-239)||(3438-3477)
[»] scaffold0107 (1 HSPs)
scaffold0107 (200-239)||(48654-48693)
[»] scaffold0019 (1 HSPs)
scaffold0019 (200-239)||(117846-117885)
[»] scaffold0130 (1 HSPs)
scaffold0130 (207-236)||(24224-24253)
[»] scaffold0002 (1 HSPs)
scaffold0002 (197-234)||(355334-355371)
[»] scaffold0250 (1 HSPs)
scaffold0250 (199-239)||(9424-9464)
[»] scaffold0025 (1 HSPs)
scaffold0025 (199-239)||(65635-65675)


Alignment Details
Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 6458453 - 6458377
Alignment:
Q  32 atgcaatcttagtccgaaaaaactaaaattagacacacacactactatgttcaactacataaatagtagtagtatat 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6458453 atgcaatcttagtccgaaaaaactaaaattagacacacacactactatgttcaactacataaatagtagtagtatat 6458377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 6758383 - 6758471
Alignment:
Q  18 agtattttgactacatgcaatcttagtccgaaaaaactaaaattagacacacacactactatgttcaactacataaatagtagtagtatat 108  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  6758383 agtattttgactacttgcaatcttagtctgaaaaaactaaaattag--acacacactactatgttcaactacataaatagtagtagtatat 6758471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 6458068 - 6458026
Alignment:
Q  109 ttttggtcaagtaaacaaggtacacatattgatttcggtgttg 151  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  6458068 ttttggtcaagtaaacaaggtacaaatattgatttcggtgttg 6458026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 6758780 - 6758822
Alignment:
Q  109 ttttggtcaagtaaacaaggtacacatattgatttcggtgttg 151  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  6758780 ttttggtcaagtaaacaaggtacaaatattgatttcggtgttg 6758822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 6784463 - 6784502
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  6784463 tactacctccgtccttaattataagacccttttgagaatt 6784502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 26058546 - 26058585
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  26058546 tacttcctccgtccctaattataagacccttttgagaatt 26058585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 49962168 - 49962112
Alignment:
Q  47 gaaaaaactaaaattagacacac----acactactatgttcaactacataaatagta 99  Q
    |||||||||| ||||||||||||    ||||||||||||||||||||||||||||||    
T  49962168 gaaaaaactataattagacacacacacacactactatgttcaactacataaatagta 49962112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 8546909 - 8546943
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||||||||||||||||||||||||    
T  8546909 cctccgtccttaattataagacccttttgagaatt 8546943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 29454825 - 29454787
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgaga 236  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  29454825 tatactacctccgtccttaattataagacccttttgaga 29454787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 47066934 - 47066972
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaat 238  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  47066934 tacttcctccgtccctaattataagacccttttgagaat 47066972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 27687979 - 27688020
Alignment:
Q  193 ttaattatacttcctccgtccttaattataagacccttttga 234  Q
    ||||| ||||| ||||||||||||||||||||||||||||||    
T  27687979 ttaataatactacctccgtccttaattataagacccttttga 27688020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 32467431 - 32467464
Alignment:
Q  206 ctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||||||||||||||||||||||||||||    
T  32467431 ctccgtccttaattataagacccttttgagaatt 32467464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 43868101 - 43868142
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  43868101 tatactccctccgtccctaattataagacccttttgagaatt 43868142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 46878476 - 46878439
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| |||||||||||||||||||||||||||||||||    
T  46878476 tactccctccgtccttaattataagacccttttgagaa 46878439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 4759389 - 4759349
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  4759389 atactacctccgtccctaattataagacccttttgagaatt 4759349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 12050430 - 12050390
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  12050430 atactccctccgtccctaattataagacccttttgagaatt 12050390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 20862191 - 20862235
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||    
T  20862191 aattatactccatccgtccctaattataagacccttttgagaatt 20862235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 22103967 - 22103927
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  22103967 atactccctccgtccctaattataagacccttttgagaatt 22103927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 24087373 - 24087333
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  24087373 atactacctccgtccctaattataagacccttttgagaatt 24087333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 25149160 - 25149120
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  25149160 atactccctccgtccctaattataagacccttttgagaatt 25149120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 35868121 - 35868081
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  35868121 atactccctccgtccctaattataagacccttttgagaatt 35868081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 41392918 - 41392878
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  41392918 atactacctccgtccctaattataagacccttttgagaatt 41392878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 43978159 - 43978199
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  43978159 atacttcctccgtccctaattataagacccttttaagaatt 43978199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 44543781 - 44543821
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  44543781 atactccctccgtccctaattataagacccttttgagaatt 44543821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 46845530 - 46845490
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  46845530 atactacctccgtccctaattataagacccttttgagaatt 46845490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 51284100 - 51284060
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  51284100 atactccctccgtccctaattataagacccttttgagaatt 51284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 8321925 - 8321964
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  8321925 tactacctccgtccctaattataagacccttttgagaatt 8321964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 9499534 - 9499495
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  9499534 tactccctccgtccctaattataagacccttttgagaatt 9499495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 10220933 - 10220972
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  10220933 tactccctccgtccctaattataagacccttttgagaatt 10220972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 21756486 - 21756525
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  21756486 tactccctccgtccctaattataagacccttttgagaatt 21756525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 237
Target Start/End: Complemental strand, 22527652 - 22527621
Alignment:
Q  206 ctccgtccttaattataagacccttttgagaa 237  Q
    ||||||||||||||||||||||||||||||||    
T  22527652 ctccgtccttaattataagacccttttgagaa 22527621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 26593802 - 26593763
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  26593802 tactccctccgtccctaattataagacccttttgagaatt 26593763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 35165999 - 35165960
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  35165999 tactcccttcgtccttaattataagacccttttgagaatt 35165960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 37728712 - 37728751
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaat 238  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  37728712 atactccctccgtccctaattataagacccttttgagaat 37728751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 45252773 - 45252812
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  45252773 tactccctccgtccctaattataagacccttttgagaatt 45252812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 45324124 - 45324085
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  45324124 tactacctccgtccttaattataagaccattttgagaatt 45324085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 46703031 - 46703066
Alignment:
Q  204 tcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||| |||||||||||||||||||||||||    
T  46703031 tcctccgtccctaattataagacccttttgagaatt 46703066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 52177796 - 52177839
Alignment:
Q  196 attatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||    
T  52177796 attatactacctccgtccctaattataggacccttttgagaatt 52177839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 54604625 - 54604586
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  54604625 tactccctccgtccttaattataagacccttttgataatt 54604586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 7181349 - 7181387
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  7181349 atactccctccgtccctaattataagacccttttgagaa 7181387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 20918224 - 20918258
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| |||||||||||||||||||||||||    
T  20918224 cctccgtccctaattataagacccttttgagaatt 20918258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 20927186 - 20927220
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| |||||||||||||||||||||||||    
T  20927186 cctccgtccctaattataagacccttttgagaatt 20927220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 28875292 - 28875254
Alignment:
Q  196 attatacttcctccgtccttaattataagacccttttga 234  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  28875292 attatactacctccgtccctaattataagacccttttga 28875254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 33360885 - 33360919
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttga 234  Q
    |||| ||||||||||||||||||||||||||||||    
T  33360885 tactacctccgtccttaattataagacccttttga 33360919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 50433429 - 50433387
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||    
T  50433429 ttatactacctccgtccctaattataagacccttgtgagaatt 50433387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 1572337 - 1572370
Alignment:
Q  206 ctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| |||||||||||||||||||||||||    
T  1572337 ctccgtccctaattataagacccttttgagaatt 1572370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 7051763 - 7051718
Alignment:
Q  194 taattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||| ||||||||| ||||||||||| |||||||||||||    
T  7051763 taataatactccctccgtccctaattataagatccttttgagaatt 7051718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 14428610 - 14428647
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  14428610 tactccctccgtccctaattataagacccttttgagaa 14428647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 22832646 - 22832605
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| | ||||||| |||||||||||||||||||||||||    
T  22832646 tatactccttccgtccctaattataagacccttttgagaatt 22832605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 23700824 - 23700783
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| ||||||||||||| |||||||||||    
T  23700824 tatactccctccgtccctaattataagacctttttgagaatt 23700783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 23719279 - 23719238
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| ||||||||||||| |||||||||||    
T  23719279 tatactccctccgtccctaattataagacctttttgagaatt 23719238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 23737735 - 23737694
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| ||||||||||||| |||||||||||    
T  23737735 tatactccctccgtccctaattataagacctttttgagaatt 23737694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 26221286 - 26221327
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||| ||||||||||||    
T  26221286 tatactccctccgtccctaattataagactcttttgagaatt 26221327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 29719747 - 29719710
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  29719747 tactacctccgtccataattataagacccttttgagaa 29719710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 32963144 - 32963103
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| ||||||||||| |||||||||||||    
T  32963144 tatactccctccgtccctaattataagatccttttgagaatt 32963103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 33868446 - 33868487
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| ||||||||||| |||||||||||||    
T  33868446 tatactccctccgtccctaattataagatccttttgagaatt 33868487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 43701176 - 43701217
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| |||| |||| |||||||||||||||||||||||||    
T  43701176 tatactccctctgtccctaattataagacccttttgagaatt 43701217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 46050023 - 46049986
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  46050023 tactccctccgtccctaattataagacccttttgagaa 46049986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 4024052 - 4024088
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgaga 236  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  4024052 tactccctccgtccctaattataagacccttttgaga 4024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 10656690 - 10656730
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| |||||| || |||||||||||||||||||||||||    
T  10656690 atactacctccgcccctaattataagacccttttgagaatt 10656730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 25148466 - 25148498
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  25148466 tccgtccctaattataagacccttttgagaatt 25148498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 26306645 - 26306605
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||| | |||||||||||||||||||||||||    
T  26306645 atactccctccgttcctaattataagacccttttgagaatt 26306605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 28673332 - 28673292
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||| |||||||||||||    
T  28673332 atactacctccgtccctaattataagatccttttgagaatt 28673292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 234
Target Start/End: Original strand, 31186764 - 31186792
Alignment:
Q  206 ctccgtccttaattataagacccttttga 234  Q
    |||||||||||||||||||||||||||||    
T  31186764 ctccgtccttaattataagacccttttga 31186792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 31397771 - 31397803
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaa 237  Q
    ||||| |||||||||||||||||||||||||||    
T  31397771 cctccttccttaattataagacccttttgagaa 31397803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 35572492 - 35572452
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||||||| |||||||| ||||||||||||    
T  35572492 atactacctccgtccttaagtataagactcttttgagaatt 35572452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 36098973 - 36099005
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  36098973 tccgtccctaattataagacccttttgagaatt 36099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 46862396 - 46862364
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  46862396 tccgtccctaattataagacccttttgagaatt 46862364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 50647677 - 50647717
Alignment:
Q  193 ttaattatacttcctccgtccttaattataagacccttttg 233  Q
    ||||| ||||| ||||||||| |||||||||||||||||||    
T  50647677 ttaataatactccctccgtccctaattataagacccttttg 50647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 53164158 - 53164202
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| |||| ||||||||| ||||||||||| |||||||||||||    
T  53164158 aattgtactacctccgtccctaattataagatccttttgagaatt 53164202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 53361893 - 53361853
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||||| |||||||||||    
T  53361893 atactccctccgtccctaattataagaccattttgagaatt 53361853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 39677146 - 39677058
Alignment:
Q  18 agtattttgactacatgcaatcttagtccgaaaaaactaaaattagacacacacactactatgttcaactacataaatagtagtagtatat 108  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  39677146 agtattttgactacatgcaatcttagtccgaaaaaattaaaattagacac--acactactatgttcaactacataaatagtagtagtatat 39677058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 31457997 - 31458036
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  31457997 tacttcctccgtccctaattataagacccttttgagaatt 31458036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 38858294 - 38858337
Alignment:
Q  196 attatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| ||||||||| |||||||||||||||||||||||||    
T  38858294 attatactccctccgtccctaattataagacccttttgagaatt 38858337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 41003191 - 41003152
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  41003191 tactccctccgtccttaattataagacccttttgagaatt 41003152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 2290056 - 2290014
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  2290056 ttatactacctccgtccctaattataagacccttttgagaatt 2290014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 29286076 - 29286035
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  29286076 tatactccctccgtccctaattataagacccttttgagaatt 29286035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 36698170 - 36698129
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  36698170 tatactccctccgtccctaattataagacccttttgagaatt 36698129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 25950830 - 25950870
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  25950830 atactacctccgtccttaattataagacctttttgagaatt 25950870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 28060724 - 28060756
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||||||||||||||||||||||    
T  28060724 tccgtccttaattataagacccttttgagaatt 28060756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 32814432 - 32814472
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  32814432 atactccctccgtccctaattataagacccttttgagaatt 32814472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 33858904 - 33858864
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  33858904 atactccctccgtccctaattataagacccttttgagaatt 33858864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 34012555 - 34012515
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  34012555 atactacctccgtccctaattataagacccttttgagaatt 34012515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 34979119 - 34979075
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||    
T  34979119 aattatactccctccgtccctaattataagactcttttgagaatt 34979075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 19920563 - 19920602
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  19920563 tactccctccgtccctaattataagacccttttgagaatt 19920602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 21295151 - 21295190
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  21295151 tactccctccgtccctaattataagacccttttgagaatt 21295190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 26255096 - 26255135
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  26255096 tactccctccgtccctaattataagacccttttgagaatt 26255135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 32872412 - 32872373
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  32872412 tactccctccgtccctaattataagacccttttgagaatt 32872373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 39197718 - 39197757
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  39197718 tactccctccgtccctaattataagacccttttgagaatt 39197757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 41026133 - 41026094
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  41026133 tactccctccgtccctaattataagacccttttgagaatt 41026094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 41252398 - 41252359
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  41252398 tactccctccgtccctaattataagacccttttgagaatt 41252359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 48521029 - 48521068
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  48521029 tactccctccgtccctaattataagacccttttgagaatt 48521068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 31769364 - 31769330
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| |||||||||||||||||||||||||    
T  31769364 cctccgtccctaattataagacccttttgagaatt 31769330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 35569688 - 35569654
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttga 234  Q
    |||| ||||||||||||||||||||||||||||||    
T  35569688 tactacctccgtccttaattataagacccttttga 35569654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 39871651 - 39871613
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  39871651 atactccctccgtccctaattataagacccttttgagaa 39871613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 44719127 - 44719165
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaat 238  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  44719127 tactacctccgtccttaattataagaccattttgagaat 44719165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 8290901 - 8290942
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||||| ||||||||||| || ||||||||||    
T  8290901 tatacttcctccgtccctaattataagatccctttgagaatt 8290942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 9140564 - 9140531
Alignment:
Q  206 ctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| |||||||||||||||||||||||||    
T  9140564 ctccgtccctaattataagacccttttgagaatt 9140531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 12631853 - 12631816
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  12631853 tactacctccgtccttaattataagaccattttgagaa 12631816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 24211190 - 24211149
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgaga 236  Q
    ||||||||| |  |||||||||||||||||||||||||||||    
T  24211190 aattatactacaaccgtccttaattataagacccttttgaga 24211149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 33381611 - 33381574
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgaga 236  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  33381611 atactacctccgtccctaattataagacccttttgaga 33381574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 39676760 - 39676719
Alignment:
Q  109 ttttggtcaagtaaacaaggtacacatattgatttcggtgtt 150  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  39676760 ttttggtcaagtaaacaaggtgcaaatattgacttcggtgtt 39676719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 44547424 - 44547465
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| ||||||||||||| |||||||||||    
T  44547424 tatactccctccgtccctaattataagacctttttgagaatt 44547465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 46415044 - 46415003
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| ||||||||||||| |||||||||||    
T  46415044 tatactacctccgtccctaattataagaccattttgagaatt 46415003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 6799588 - 6799545
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||    
T  6799588 aattatactacctccgtccctaattataaga-ccttttgagaatt 6799545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 11647864 - 11647832
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  11647864 tccgtccctaattataagacccttttgagaatt 11647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 12616421 - 12616381
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  12616421 atactacctccgtcccttattataagacccttttgagaatt 12616381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 20075147 - 20075111
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttg 233  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  20075147 ttatactccctccgtccctaattataagacccttttg 20075111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 26299323 - 26299355
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  26299323 tccgtccctaattataagacccttttgagaatt 26299355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 27813494 - 27813530
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttga 234  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  27813494 tatactacctccgtccctaattataagacccttttga 27813530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 28016575 - 28016543
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  28016575 tccgtccctaattataagacccttttgagaatt 28016543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 29177291 - 29177251
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaat 238  Q
    |||||| ||||||||| ||||||||||| ||||||||||||    
T  29177291 tatactccctccgtccctaattataagatccttttgagaat 29177251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 36646675 - 36646635
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||| ||||||||||||||||||    
T  36646675 atactccctccgtccctaattagaagacccttttgagaatt 36646635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 38858598 - 38858562
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttg 233  Q
    ||||||||||||||||| | |||||||||||||||||    
T  38858598 ttatacttcctccgtcccttattataagacccttttg 38858562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 39135094 - 39135134
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||| ||||||||||||||||||    
T  39135094 atactacctccgtccctaattacaagacccttttgagaatt 39135134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 40300230 - 40300266
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgaga 236  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  40300230 tactccctccgtccctaattataagacccttttgaga 40300266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 38176825 - 38176880
Alignment:
Q  47 gaaaaaactaaaattagacacacacactactatgttcaactacataaatagtagta 102  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  38176825 gaaaaaactataattagacacacacactactatggtcaactacataaatagtagta 38176880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 8841696 - 8841655
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  8841696 tatactccctccgtccttaattataagacccttttgagaatt 8841655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 34062707 - 34062663
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  34062707 aattatactccctccgtccctaattataagacccttttgagaatt 34062663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 44573920 - 44573880
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  44573920 atactacctccgtccttaattataagacccttttgagaatt 44573880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 20252208 - 20252249
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  20252208 tatactccctccgtccctaattataagacccttttgagaatt 20252249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 23788969 - 23789006
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| |||||||||||||||||||||||||||||||||    
T  23788969 tactccctccgtccttaattataagacccttttgagaa 23789006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 41450514 - 41450555
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  41450514 tatactccctccgtccctaattataagacccttttgagaatt 41450555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 1859554 - 1859586
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||||||||||||||||||||||    
T  1859554 tccgtccttaattataagacccttttgagaatt 1859586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 11201682 - 11201722
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  11201682 atactccctccgtccctaattataagacccttttgagaatt 11201722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 12360456 - 12360496
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  12360456 atactacctccgtctttaattataagacccttttgagaatt 12360496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 26322331 - 26322291
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  26322331 atactacctccgtccctaattataagacccttttgagaatt 26322291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 34883886 - 34883846
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  34883886 atactccctccgtccctaattataagacccttttgagaatt 34883846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 2438225 - 2438264
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  2438225 tactccctccgtccctaattataagacccttttgagaatt 2438264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 7491844 - 7491883
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  7491844 tactccctccgtccctaattataagacccttttgagaatt 7491883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 8716929 - 8716890
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  8716929 tactccctccgtccctaattataagacccttttgagaatt 8716890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 8912911 - 8912872
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  8912911 tactacctccgtccctaattataagacccttttgagaatt 8912872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 234
Target Start/End: Original strand, 9701069 - 9701104
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttga 234  Q
    ||||| ||||||||||||||||||||||||||||||    
T  9701069 atactacctccgtccttaattataagacccttttga 9701104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 15404744 - 15404705
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  15404744 tactccctccgtccttaattgtaagacccttttgagaatt 15404705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 16669626 - 16669665
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  16669626 tactccctccgttcttaattataagacccttttgagaatt 16669665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 17408331 - 17408292
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  17408331 tactccctccgtccctaattataagacccttttgagaatt 17408292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 36131065 - 36131026
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  36131065 tactccctccgtccctaattataagacccttttgagaatt 36131026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 45628916 - 45628877
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  45628916 tactacctccatccttaattataagacccttttgagaatt 45628877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 34113528 - 34113570
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| | ||||||| |||||||||||||||||||||||||    
T  34113528 ttatactccatccgtccctaattataagacccttttgagaatt 34113570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 39833734 - 39833772
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttg 233  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  39833734 aattatactccctccgtccctaattataagacccttttg 39833772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 40607701 - 40607739
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  40607701 atactccctccgtccctaattataagacccttttgagaa 40607739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 2060316 - 2060353
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  2060316 tactacctccgtccctaattataagacccttttgagaa 2060353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 4711726 - 4711767
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  4711726 tatactccctccgtccctaattaaaagacccttttgagaatt 4711767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 7116336 - 7116299
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  7116336 tactacctccgtccctaattataagacccttttgagaa 7116299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 27560206 - 27560243
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  27560206 tactccctccgtccctaattataagacccttttgagaa 27560243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 28566151 - 28566188
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  28566151 tactacctccgtccctaattataagacccttttgagaa 28566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 31751065 - 31751102
Alignment:
Q  196 attatacttcctccgtccttaattataagacccttttg 233  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  31751065 attatactacctccgtccctaattataagacccttttg 31751102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 40680725 - 40680766
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| | ||||||| |||||||||||||||||||||||||    
T  40680725 tatactccatccgtccctaattataagacccttttgagaatt 40680766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 5664637 - 5664677
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||||| |||||||||||    
T  5664637 atactccctccgtccctaattataagacctttttgagaatt 5664677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 11865327 - 11865287
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||| ||||||||||||    
T  11865327 atactacctccgtccctaattataagactcttttgagaatt 11865287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 15228187 - 15228147
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||| |||||||||||||    
T  15228187 atactccctccgtccctaattataagatccttttgagaatt 15228147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 16108212 - 16108248
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttg 233  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  16108212 ttatactccctccgtccctaattataagacccttttg 16108248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 16456902 - 16456870
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  16456902 tccgtccctaattataagacccttttgagaatt 16456870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 16805829 - 16805789
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||| |||||||||||||    
T  16805829 atactccctccgtccctaattataagatccttttgagaatt 16805789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 16845110 - 16845070
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||| |||||||||||||    
T  16845110 atactccctccgtccctaattataagatccttttgagaatt 16845070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 22897390 - 22897430
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||| |||||||||||||    
T  22897390 atactccctccgtccctaattataagatccttttgagaatt 22897430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 25624732 - 25624772
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||||| |||||||||||    
T  25624732 atactccctccgtccctaattataagacctttttgagaatt 25624772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 28840646 - 28840678
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  28840646 tccgtccctaattataagacccttttgagaatt 28840678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 41422510 - 41422546
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttga 234  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  41422510 tatactacctccgtccctaattataagacccttttga 41422546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 42633255 - 42633297
Alignment:
Q  64 acacacacactactatgttcaactacataaatagtagtagtat 106  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42633255 acacacacactactatgttcaactacataaatagtagtagtat 42633297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 14913643 - 14913687
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  14913643 aattatactccctccgtccctaattataagacccttttgagaatt 14913687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 26894914 - 26894871
Alignment:
Q  196 attatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| ||||||||| |||||||||||||||||||||||||    
T  26894914 attatactccctccgtccctaattataagacccttttgagaatt 26894871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 6673268 - 6673226
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  6673268 ttatactccctccgtccctaattataagacccttttgagaatt 6673226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 22527690 - 22527731
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  22527690 tatactccctccgtccctaattataagacccttttgagaatt 22527731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 40004448 - 40004407
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  40004448 tatactccctccgtccctaattataagacccttttgagaatt 40004407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 3028010 - 3028050
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  3028010 ttatactacctccgtccctaattataagacccttttgagaa 3028050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 16127258 - 16127298
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  16127258 atactccctccgtccctaattataagacccttttgagaatt 16127298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 23260178 - 23260138
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  23260178 ttatactacctccgtccctaattataagacccttttgagaa 23260138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 41384214 - 41384170
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||    
T  41384214 aattatactccctccgtccctaattataagatccttttgagaatt 41384170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 1265949 - 1265988
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  1265949 tactccctccgtccctaattataagacccttttgagaatt 1265988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 5527974 - 5528013
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  5527974 tactccctccgtccttaattataagacctttttgagaatt 5528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 9828393 - 9828432
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  9828393 tactccctccgtccctaattataagacccttttgagaatt 9828432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 16440927 - 16440970
Alignment:
Q  196 attatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||    
T  16440927 attatactccctccgtccctaattataagacccttttaagaatt 16440970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 23286511 - 23286472
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  23286511 tactacctccgtccctaattataagacccttttgagaatt 23286472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 43060448 - 43060409
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  43060448 tactacctccgtccctaattataagacccttttgagaatt 43060409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 8949811 - 8949849
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  8949811 atactacctccgtccctaattataagacccttttgagaa 8949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 13759487 - 13759445
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||| | |||||||||||||||||||||||||    
T  13759487 ttatactacctccgttcctaattataagacccttttgagaatt 13759445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 22657765 - 22657807
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||    
T  22657765 ttatactacctccgtccctaattataagatccttttgagaatt 22657807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 24308172 - 24308138
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||||||||||| ||||||||||||    
T  24308172 cctccgtccttaattataagactcttttgagaatt 24308138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 24365151 - 24365185
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||||||||||| ||||||||||||    
T  24365151 cctccgtccttaattataagactcttttgagaatt 24365185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 32147291 - 32147333
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||    
T  32147291 ttatactccctccgtccctaattataagacctttttgagaatt 32147333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 34662202 - 34662240
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgaga 236  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  34662202 tatactccctccgtccctaattataagacccttttgaga 34662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 39984775 - 39984809
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||||||||||||||||| ||||||    
T  39984775 cctccgtccttaattataagacccttttaagaatt 39984809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 42561381 - 42561347
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||||||||||||||| |||||||||||||    
T  42561381 cctccgtccttaattataagatccttttgagaatt 42561347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 42632910 - 42632868
Alignment:
Q  109 ttttggtcaagtaaacaaggtacacatattgatttcggtgttg 151  Q
    ||||||||||||||||||||| || |||||||||| |||||||    
T  42632910 ttttggtcaagtaaacaaggtgcaaatattgattttggtgttg 42632868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 14789558 - 14789591
Alignment:
Q  206 ctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||| |||||||||||||||||||||||    
T  14789558 ctccgtcctttattataagacccttttgagaatt 14789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 15190854 - 15190813
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||| ||||||||||||    
T  15190854 tatactccctccgtccctaattataagactcttttgagaatt 15190813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 25601099 - 25601058
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||| | |||||||||||||||||||||||||    
T  25601099 tatactccctccgttcctaattataagacccttttgagaatt 25601058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 26605661 - 26605620
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||| ||| |||||||||||||||||||||||||||    
T  26605661 tatactaccttcgttcttaattataagacccttttgagaatt 26605620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 27873376 - 27873343
Alignment:
Q  206 ctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| |||||||||||||||||||||||||    
T  27873376 ctccgtccctaattataagacccttttgagaatt 27873343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 32478144 - 32478177
Alignment:
Q  206 ctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| |||||||||||||||||||||||||    
T  32478144 ctccgtccctaattataagacccttttgagaatt 32478177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 7940450 - 7940486
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttga 234  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  7940450 tatactacctccgtccctaattataagacccttttga 7940486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 7951562 - 7951598
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgaga 236  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  7951562 tactccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 15521980 - 15521940
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||| |||||||||||||||    
T  15521980 atactccctccgtccctaattataaaacccttttgagaatt 15521940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 16153285 - 16153253
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  16153285 tccgtccctaattataagacccttttgagaatt 16153253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 18251019 - 18251051
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaa 237  Q
    |||||||||||||||||||||||||||| ||||    
T  18251019 cctccgtccttaattataagacccttttaagaa 18251051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 19571976 - 19571940
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgaga 236  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  19571976 tactacctccgtccctaattataagacccttttgaga 19571940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 21239098 - 21239138
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||| ||||||||||||||||||    
T  21239098 atactacctccgtccctaattagaagacccttttgagaatt 21239138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 40643093 - 40643133
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||| |||||||||||||    
T  40643093 atactacctccgtccctaattataagatccttttgagaatt 40643133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 47635 - 47679
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  47635 aattatactccctccgtccctaattataagacccttttgagaatt 47679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 36391853 - 36391893
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  36391853 atactccctccgtccttaattataagacccttttgagaatt 36391893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 26866900 - 26866861
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  26866900 tactacctccgtccttaattataagacccttttgagaatt 26866861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 43388030 - 43387991
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  43388030 tacttcctccgtccctaattataagacccttttgagaatt 43387991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 47228765 - 47228726
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  47228765 tacttcctccgtccctaattataagacccttttgagaatt 47228726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 37352549 - 37352583
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||||||||||||||||||||||||    
T  37352549 cctccgtccttaattataagacccttttgagaatt 37352583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 37357448 - 37357482
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||||||||||||||||||||||||    
T  37357448 cctccgtccttaattataagacccttttgagaatt 37357482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 375423 - 375460
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgaga 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  375423 atactacctccgtccttaattataagacccttttgaga 375460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 4035823 - 4035864
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  4035823 tatactccctccgtccctaattataagacccttttgagaatt 4035864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 4415962 - 4416003
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaat 238  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  4415962 ttatactacctccgtccctaattataagacccttttgagaat 4416003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 20455220 - 20455179
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  20455220 tatactacctccgtccctaattataagacccttttgagaatt 20455179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 46949989 - 46950030
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaat 238  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  46949989 ttatactacctccgtccctaattataagacccttttgagaat 46950030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 9328282 - 9328238
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||    
T  9328282 aattgtactccctccgtccctaattataagacccttttgagaatt 9328238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 45742844 - 45742804
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  45742844 atactccctccgtccctaattataagacccttttgagaatt 45742804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 49793090 - 49793130
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  49793090 atactacctccgtccctaattataagacccttttgagaatt 49793130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 56432517 - 56432557
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  56432517 atactacctccgtccctaattataagacccttttgagaatt 56432557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 5375594 - 5375555
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  5375594 tactccctccgtccctaattataagacccttttgagaatt 5375555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 30771528 - 30771567
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  30771528 tactccctccgtccctaattataagacccttttgagaatt 30771567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 31937076 - 31937115
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  31937076 tactacctccgtccctaattataagacccttttgagaatt 31937115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 32033030 - 32032991
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  32033030 tactccctccgtccctaattataagacccttttgagaatt 32032991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 34273256 - 34273217
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  34273256 tactccctccgtccctaattataagacccttttgagaatt 34273217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 37776779 - 37776740
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttga 234  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  37776779 aattctactacctccgtccttaattataagacccttttga 37776740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 44294789 - 44294828
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  44294789 tactccctccgtccctaattataagacccttttgagaatt 44294828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 47806860 - 47806899
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  47806860 tactccctccgtccctaattataagacccttttgagaatt 47806899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 49373730 - 49373691
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  49373730 tactacctccgtccctaattataagacccttttgagaatt 49373691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 52977982 - 52978021
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  52977982 tactccctccgtccctaattataagacccttttgagaatt 52978021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 16546015 - 16545981
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||||||||||||||| |||||||||||||    
T  16546015 cctccgtccttaattataagatccttttgagaatt 16545981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 28501424 - 28501386
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  28501424 atactacctccgtccctaattataagacccttttgagaa 28501386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 32899257 - 32899219
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgaga 236  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  32899257 tatactacctccgtccctaattataagacccttttgaga 32899219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 41620519 - 41620553
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| |||||||||||||||||||||||||    
T  41620519 cctccgtccctaattataagacccttttgagaatt 41620553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 51335788 - 51335830
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||||||| ||||| || ||||||||||||||||||||||||    
T  51335788 aattatactacctccatctttaattataagacccttttgagaa 51335830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 5743696 - 5743659
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  5743696 tactccctccgtccctaattataagacccttttgagaa 5743659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 24073164 - 24073127
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgaga 236  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  24073164 atactacctccgtccttaattataagacctttttgaga 24073127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 24754076 - 24754117
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| ||||||||||| |||||||||||||    
T  24754076 tatactccctccgtccctaattataagatccttttgagaatt 24754117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 25124283 - 25124246
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  25124283 tactacctccgtccctaattataagacccttttgagaa 25124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 29520201 - 29520164
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  29520201 tactacctccgtccctaattataagacccttttgagaa 29520164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 33413518 - 33413555
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  33413518 tactccctccgtccctaattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 53564393 - 53564356
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  53564393 tactacctccgtccctaattataagacccttttgagaa 53564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 6083290 - 6083322
Alignment:
Q  206 ctccgtccttaattataagacccttttgagaat 238  Q
    |||||||||||||||||||||| ||||||||||    
T  6083290 ctccgtccttaattataagacctttttgagaat 6083322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 6807428 - 6807468
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| |||| |||| |||||||||||||||||||||||||    
T  6807428 atactccctctgtccctaattataagacccttttgagaatt 6807468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 17610058 - 17610018
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||| |||||||||||||    
T  17610058 atactccctccgtccctaattataagatccttttgagaatt 17610018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 18872715 - 18872751
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttga 234  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  18872715 tatactacctccgtccctaattataagacccttttga 18872751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 20768254 - 20768214
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||||||||||||| |||||||| ||||||    
T  20768254 atactacctccgtccttaattataaaacccttttaagaatt 20768214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 26626039 - 26626003
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgaga 236  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  26626039 tactccctccgtccctaattataagacccttttgaga 26626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 28298409 - 28298369
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||| |||||||||||||    
T  28298409 atactacctccgtccctaattataagatccttttgagaatt 28298369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 45097195 - 45097163
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  45097195 tccgtccctaattataagacccttttgagaatt 45097163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 48030312 - 48030352
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||| ||| |||||||||||||||||||||||||    
T  48030312 atactccctccatccctaattataagacccttttgagaatt 48030352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 55563164 - 55563128
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgaga 236  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  55563164 tactacctccgtccctaattataagacccttttgaga 55563128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 55876387 - 55876419
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  55876387 tccgtccctaattataagacccttttgagaatt 55876419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 25509204 - 25509248
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  25509204 aattatactacctccgtccctaattataagacccttttgagaatt 25509248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 38261340 - 38261379
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  38261340 tactacctccgtccttaattataagacccttttgagaatt 38261379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 52431214 - 52431172
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  52431214 ttatactccctccgtccctaattataagacccttttgagaatt 52431172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 4102753 - 4102712
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  4102753 tatactccctccgtccctaattataagacccttttgagaatt 4102712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 1427198 - 1427238
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  1427198 atactacctccgtccttaaatataagacccttttgagaatt 1427238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 7763787 - 7763747
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  7763787 atactacctccgtccctaattataagacccttttgagaatt 7763747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 11741396 - 11741436
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  11741396 atactccctccgtccctaattataagacccttttgagaatt 11741436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 27037268 - 27037308
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  27037268 atactacctccgtccctaattataagacccttttgagaatt 27037308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 37951987 - 37951947
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  37951987 atactccctccgtccctaattataagacccttttgagaatt 37951947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 39497432 - 39497472
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  39497432 atactccctccgtccctaattataagacccttttgagaatt 39497472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 45039411 - 45039451
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  45039411 atactccctccgtccctaattataagacccttttgagaatt 45039451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 943674 - 943635
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  943674 tactccctccgtccctaattataagacccttttgagaatt 943635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 1039418 - 1039379
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  1039418 tactccctccgtccctaattataagacccttttgagaatt 1039379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 1046324 - 1046285
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  1046324 tactccctccgtccctaattataagacccttttgagaatt 1046285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 15811269 - 15811230
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  15811269 tactccctccgtccctaattataagacccttttgagaatt 15811230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 234
Target Start/End: Original strand, 23530541 - 23530576
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttga 234  Q
    ||||| ||||||||||||||||||||||||||||||    
T  23530541 atactacctccgtccttaattataagacccttttga 23530576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 23541979 - 23542018
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  23541979 tactccctccgtccctaattataagacccttttgagaatt 23542018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 36694854 - 36694893
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  36694854 tactccctccgtccctaattataagacccttttgagaatt 36694893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 36710955 - 36710994
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  36710955 tactccctccgtccctaattataagacccttttgagaatt 36710994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 39363231 - 39363192
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  39363231 tactccctccgtccctaattataagacccttttgagaatt 39363192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 43456658 - 43456619
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  43456658 tactacctccgtccctaattataagacccttttgagaatt 43456619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 44649629 - 44649668
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  44649629 tactccctccgtccctaattataagacccttttgagaatt 44649668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 49907021 - 49907060
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  49907021 tactccctccgtccctaattataagacccttttgagaatt 49907060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 30289894 - 30289860
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||| |||||||||||||||||||||||||    
T  30289894 cctccgtccctaattataagacccttttgagaatt 30289860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 32169986 - 32169952
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||||||||||||||||| |||||||||||    
T  32169986 cctccgtccttaattataagaccattttgagaatt 32169952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 42276199 - 42276161
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  42276199 atactacctccgtccctaattataagacccttttgagaa 42276161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 46075904 - 46075866
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaat 238  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  46075904 tactccctccgtccctaattataagacccttttgagaat 46075866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 232
Target Start/End: Original strand, 2279952 - 2279985
Alignment:
Q  199 atacttcctccgtccttaattataagaccctttt 232  Q
    ||||||||||||||| ||||||||||||||||||    
T  2279952 atacttcctccgtccctaattataagaccctttt 2279985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 9413365 - 9413328
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttga 234  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  9413365 ttatactacctccgtccctaattataagacccttttga 9413328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 13343778 - 13343811
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaat 238  Q
    ||||||||| ||||||||||||||||||||||||    
T  13343778 cctccgtccctaattataagacccttttgagaat 13343811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 30290265 - 30290302
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  30290265 tactccctccgtccctaattataagacccttttgagaa 30290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 45039709 - 45039676
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttg 233  Q
    |||||||||||||| |||||||||||||||||||    
T  45039709 tacttcctccgtccctaattataagacccttttg 45039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 52601989 - 52602030
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||| ||||||    
T  52601989 tatactccctccgtccctaattataagacccttttaagaatt 52602030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 5766028 - 5765988
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||||||||||| |||||    
T  5766028 atactacctccgtccctaattataagacccttttgtgaatt 5765988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 11907268 - 11907228
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||||||||  |||||||||||||||||| ||||||    
T  11907268 atacttcctccgtctctaattataagacccttttaagaatt 11907228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 18237093 - 18237133
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||| ||||||||||||    
T  18237093 atactacctccgtccctaattataagactcttttgagaatt 18237133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 28885840 - 28885876
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttga 234  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  28885840 tatactacctccgtccctaattataagacccttttga 28885876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 39362931 - 39362967
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttg 233  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  39362931 ttatactccctccgtccctaattataagacccttttg 39362967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 39750118 - 39750154
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttg 233  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  39750118 ttatactccctccgtccctaattataagacccttttg 39750154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 41855503 - 41855471
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  41855503 tccgtccctaattataagacccttttgagaatt 41855471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 48853811 - 48853851
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||||| ||||||||| ||||||||| |||||||||||||    
T  48853811 ttatactacctccgtccataattataaaacccttttgagaa 48853851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 50246967 - 50246927
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||| |||||||||||||    
T  50246967 atactccctccgtccgtaattataagatccttttgagaatt 50246927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 50937778 - 50937818
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||||| |||||||||||    
T  50937778 atactacctccgtccctaattataagaccattttgagaatt 50937818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 7177 - 7138
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  7177 tacttcctccgtccctaattataagacccttttgagaatt 7138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 14385 - 14346
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  14385 tactccctccgtccttaattataagacccttttgagaatt 14346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 38781182 - 38781139
Alignment:
Q  196 attatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| ||||||||| |||||||||||||||||||||||||    
T  38781182 attatactacctccgtccataattataagacccttttgagaatt 38781139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 18754141 - 18754183
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  18754141 ttatactccctccgtccctaattataagacccttttgagaatt 18754183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 2152279 - 2152238
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  2152279 tatactacctccgtccctaattataagacccttttgagaatt 2152238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 13568943 - 13568906
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgaga 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  13568943 atactacctccgtccttaattataagacccttttgaga 13568906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 8251971 - 8251931
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  8251971 atactccctccgtccctaattataagacccttttgagaatt 8251931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 8797327 - 8797295
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||||||||||||||||||||||    
T  8797327 tccgtccttaattataagacccttttgagaatt 8797295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 12802608 - 12802648
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  12802608 ttatactacctccgtccctaattataagacccttttgagaa 12802648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 13153927 - 13153967
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  13153927 atactccctccgtccctaattataagacccttttgagaatt 13153967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 28572045 - 28572085
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  28572045 atactccctccgtccctaattataagacccttttgagaatt 28572085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 28579638 - 28579678
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  28579638 atactccctccgtccctaattataagacccttttgagaatt 28579678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 34568489 - 34568529
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  34568489 atactccctccgtccctaattataagacccttttgagaatt 34568529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 51132 - 51093
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  51132 tactccctccgtccctaattataagacccttttgagaatt 51093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 1774342 - 1774381
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  1774342 tactccctccgtccctaattataagacccttttgagaatt 1774381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 2944309 - 2944270
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  2944309 tactccctccgtccctaattataagacccttttgagaatt 2944270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 5162304 - 5162343
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  5162304 tactacctccgtccctaattataagacccttttgagaatt 5162343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 8951465 - 8951426
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  8951465 tactccctccgtccctaattataagacccttttgagaatt 8951426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 14699452 - 14699491
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  14699452 tacttcctccgtccctaattataagatccttttgagaatt 14699491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 18641417 - 18641378
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  18641417 tactacctccgtccctaattataagacccttttgagaatt 18641378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 19176136 - 19176171
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgag 235  Q
    |||| |||||||||||||||||||||||||||||||    
T  19176136 tactacctccgtccttaattataagacccttttgag 19176171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 23487059 - 23487098
Alignment:
Q  195 aattatacttcctccgtccttaattataagacccttttga 234  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  23487059 aattatactacctccgtccctaattataagacccttttga 23487098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 28192212 - 28192173
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  28192212 tactccctccgtccctaattataagacccttttgagaatt 28192173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 40529303 - 40529346
Alignment:
Q  196 attatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  40529303 attatactccctccgtccctaattataagatccttttgagaatt 40529346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 32675795 - 32675757
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  32675795 atactccctccgtccctaattataagacccttttgagaa 32675757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 5593419 - 5593460
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| | ||||||| |||||||||||||||||||||||||    
T  5593419 tatactccttccgtccctaattataagacccttttgagaatt 5593460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 17069881 - 17069844
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  17069881 tactacctccgtccctaattataagacccttttgagaa 17069844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 17578392 - 17578429
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  17578392 tactacctccgtccctaattataagacccttttgagaa 17578429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 17856517 - 17856550
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttg 233  Q
    |||| |||||||||||||||||||||||||||||    
T  17856517 tactccctccgtccttaattataagacccttttg 17856550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 26016566 - 26016603
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttga 234  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  26016566 ttatactccctccgtccctaattataagacccttttga 26016603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 33865572 - 33865539
Alignment:
Q  206 ctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||| |||||||||||||||||||||||||    
T  33865572 ctccgtccctaattataagacccttttgagaatt 33865539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 36786467 - 36786504
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  36786467 tacttcctccgtccctaattataagacctttttgagaa 36786504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 39029178 - 39029215
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  39029178 tactccctccgtccctaattataagacccttttgagaa 39029215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 5774047 - 5774087
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||| ||||||||||||    
T  5774047 atactacctccgtccctaattataagactcttttgagaatt 5774087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 8948381 - 8948349
Alignment:
Q  207 tccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| |||||||||||||||||||||||||    
T  8948381 tccgtccctaattataagacccttttgagaatt 8948349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 14584169 - 14584129
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||| | |||||||||||||||||||||||||    
T  14584169 atactacctccgttcctaattataagacccttttgagaatt 14584129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 17856815 - 17856779
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttga 234  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  17856815 tatactccctccgtccctaattataagacccttttga 17856779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 29598223 - 29598263
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||  |||||||||||||||||||||||||    
T  29598223 atactccctccgtctctaattataagacccttttgagaatt 29598263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 29806260 - 29806220
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||| |||||||||||||||    
T  29806260 atactacctccgtccctaattataaaacccttttgagaatt 29806220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 40530446 - 40530410
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttg 233  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  40530446 ttatactccctccgtccctaattataagacccttttg 40530410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 40784890 - 40784930
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||||| |||||||||||    
T  40784890 atactacctccgtccctaattataagacctttttgagaatt 40784930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 43654241 - 43654201
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||| ||||||||||||    
T  43654241 atactccctccgtccctaattataagactcttttgagaatt 43654201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 12062 - 12104
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  12062 ttatactccctccgtccctaattataagacccttttgagaatt 12104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 402661 - 402619
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  402661 ttatactacctccgtccctaattataagacccttttgagaatt 402619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 4844397 - 4844439
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  4844397 ttatactccctccgtccctaattataagacccttttgagaatt 4844439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 30248645 - 30248686
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  30248645 tatactccctccgtccctaattataagacccttttgagaatt 30248686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 13648166 - 13648130
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgaga 236  Q
    |||| ||||||||||||||||||||||||||||||||    
T  13648166 tactccctccgtccttaattataagacccttttgaga 13648130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 13901640 - 13901680
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  13901640 atactacctccgtccctaattataagacccttttgagaatt 13901680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 15498628 - 15498668
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  15498628 atactacctccgtccctaattataagacccttttgagaatt 15498668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 25045681 - 25045641
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  25045681 atactacctccgtccctaattataagacccttttgagaatt 25045641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 34915581 - 34915541
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  34915581 atactacctccgtccctaattataagacccttttgagaatt 34915541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 231142 - 231103
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  231142 tactccctccgtccctaattataagacccttttgagaatt 231103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 2090658 - 2090697
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  2090658 tactacctccgtccctaattataagacccttttgagaatt 2090697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 8743188 - 8743227
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  8743188 tactccctccgtccctaattataagacccttttgagaatt 8743227  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 234
Target Start/End: Complemental strand, 16273006 - 16272971
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttga 234  Q
    ||||||||||||||| ||||||||||||||||||||    
T  16273006 atacttcctccgtccctaattataagacccttttga 16272971  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 23604458 - 23604497
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  23604458 tatactacctccgtccctaattataagacccttttgagaa 23604497  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 34301869 - 34301830
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  34301869 tactccctccgtccctaattataagacccttttgagaatt 34301830  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 5576417 - 5576375
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||| ||||||||||||||||||||||  |||||||||||    
T  5576417 ttatactacctccgtccttaattataagacgtttttgagaatt 5576375  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 11161850 - 11161888
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaa 237  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  11161850 atactacctccgtccttaattataagagccttttgagaa 11161888  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 5457410 - 5457451
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| ||||||||||||| |||||||||||    
T  5457410 tatactccctccgtccctaattataagacctttttgagaatt 5457451  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 9341836 - 9341877
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| ||||||||||| |||||||||||||    
T  9341836 tatactacctccgtccctaattataagatccttttgagaatt 9341877  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 13011157 - 13011120
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaa 237  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  13011157 tactacctccgtccttaattataagatccttttgagaa 13011120  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 27581385 - 27581426
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| |||||||||  ||||||||||||||||||||||||    
T  27581385 tatactacctccgtccccaattataagacccttttgagaatt 27581426  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 7772175 - 7772215
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||| ||||||||||||    
T  7772175 atactacctccgtccctaattataagactcttttgagaatt 7772215  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 7847346 - 7847306
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||| |||||||||||||||||||||    
T  7847346 atactacctccgtccctaaatataagacccttttgagaatt 7847306  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 9388829 - 9388789
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||||| |||||||||||    
T  9388829 atactccctccgtccctaattataagacctttttgagaatt 9388789  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 11847570 - 11847610
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||||||||||||| ||||||||||| |||||| ||||||    
T  11847570 atacttcctccgtccctaattataagatccttttaagaatt 11847610  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 13321369 - 13321329
Alignment:
Q  194 taattatacttcctccgtccttaattataagacccttttga 234  Q
    |||| ||||| ||||||||| ||||||||||||||||||||    
T  13321369 taataatactacctccgtccctaattataagacccttttga 13321329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 17227559 - 17227527
Alignment:
Q  205 cctccgtccttaattataagacccttttgagaa 237  Q
    ||||||||| |||||||||||||||||||||||    
T  17227559 cctccgtccctaattataagacccttttgagaa 17227527  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 19097839 - 19097799
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||  |||||||||||||||||||||||||    
T  19097839 atactccctccgtctctaattataagacccttttgagaatt 19097799  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 34741766 - 34741730
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttg 233  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  34741766 ttatactccctccgtccctaattataagacccttttg 34741730  T

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Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 51721 - 51680
Alignment:
Q  198 tatacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  51721 tatactccctccgtccctaattataagacccttttgagaatt 51680  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 259160 - 259120
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  259160 atactccctccgtccctaattataagacccttttgagaatt 259120  T

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Target: scaffold0674 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 5151 - 5190
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  5151 tactacctccgtccctaattataagacccttttgagaatt 5190  T

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Target: scaffold0604 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 3819 - 3780
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  3819 tactccctccgtccctaattataagacccttttgagaatt 3780  T

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Target: scaffold0549 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 10219 - 10180
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  10219 tactacctccgtccctaattataagacccttttgagaatt 10180  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 18497 - 18536
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  18497 tactacctccgtccctaattataagacccttttgagaatt 18536  T

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Target: scaffold0161 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 3438 - 3477
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  3438 tactacctccgtccctaattataagacccttttgagaatt 3477  T

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Target: scaffold0107 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 48654 - 48693
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  48654 tactacctccgtccctaattataagacccttttgagaatt 48693  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 117846 - 117885
Alignment:
Q  200 tacttcctccgtccttaattataagacccttttgagaatt 239  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  117846 tacttcctccgtccctaattataagatccttttgagaatt 117885  T

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Target: scaffold0130 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 24224 - 24253
Alignment:
Q  207 tccgtccttaattataagacccttttgaga 236  Q
    ||||||||||||||||||||||||||||||    
T  24224 tccgtccttaattataagacccttttgaga 24253  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 355371 - 355334
Alignment:
Q  197 ttatacttcctccgtccttaattataagacccttttga 234  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  355371 ttatactccctccgtccctaattataagacccttttga 355334  T

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Target: scaffold0250 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 9464 - 9424
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||| |||||||||||||    
T  9464 atactacctccgtccctaattataagatccttttgagaatt 9424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 65675 - 65635
Alignment:
Q  199 atacttcctccgtccttaattataagacccttttgagaatt 239  Q
    ||||| ||||||||| ||||||||||||| |||||||||||    
T  65675 atactccctccgtccctaattataagacctttttgagaatt 65635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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