View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2151_low_3 (Length: 466)

Name: NF2151_low_3
Description: NF2151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2151_low_3
NF2151_low_3
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-67)||(685-751)
[»] chr6 (20 HSPs)
chr6 (1-67)||(26670043-26670109)
chr6 (1-67)||(9698367-9698433)
chr6 (1-65)||(30735984-30736048)
chr6 (1-67)||(7273369-7273435)
chr6 (1-67)||(26466799-26466865)
chr6 (1-65)||(24204021-24204085)
chr6 (1-67)||(13743255-13743321)
chr6 (1-67)||(13748755-13748821)
chr6 (1-67)||(30014343-30014409)
chr6 (1-67)||(3213400-3213466)
chr6 (1-67)||(21279929-21279995)
chr6 (1-67)||(7292747-7292813)
chr6 (1-67)||(7367549-7367615)
chr6 (1-67)||(31109256-31109322)
chr6 (1-65)||(27441544-27441608)
chr6 (382-421)||(32871845-32871884)
chr6 (1-67)||(21293711-21293777)
chr6 (1-67)||(33242403-33242469)
chr6 (6-67)||(33253913-33253974)
chr6 (382-410)||(34713489-34713517)
[»] chr3 (24 HSPs)
chr3 (1-67)||(25413681-25413747)
chr3 (1-67)||(42100688-42100754)
chr3 (1-67)||(40808865-40808931)
chr3 (1-67)||(46941053-46941119)
chr3 (1-67)||(54246182-54246248)
chr3 (1-66)||(54237097-54237162)
chr3 (1-67)||(24688436-24688502)
chr3 (1-67)||(45126962-45127028)
chr3 (1-67)||(47191060-47191125)
chr3 (1-66)||(42394453-42394518)
chr3 (1-67)||(4190299-4190365)
chr3 (8-65)||(1078229-1078286)
chr3 (1-65)||(27748565-27748629)
chr3 (1-67)||(36150130-36150196)
chr3 (1-67)||(51757593-51757659)
chr3 (1-66)||(40480750-40480815)
chr3 (1-65)||(53581892-53581956)
chr3 (1-67)||(9434124-9434190)
chr3 (1-67)||(10457926-10457992)
chr3 (1-67)||(34791829-34791895)
chr3 (1-67)||(53273718-53273784)
chr3 (374-438)||(45853018-45853082)
chr3 (31-67)||(52629840-52629876)
chr3 (1-67)||(52628011-52628077)
[»] chr8 (26 HSPs)
chr8 (1-67)||(29705362-29705428)
chr8 (1-65)||(30912596-30912660)
chr8 (1-65)||(42699259-42699323)
chr8 (1-67)||(2165997-2166063)
chr8 (1-67)||(2546996-2547062)
chr8 (1-67)||(11582766-11582832)
chr8 (1-67)||(36743517-36743583)
chr8 (1-65)||(42295197-42295261)
chr8 (1-67)||(30660776-30660842)
chr8 (1-66)||(45397317-45397382)
chr8 (1-65)||(20148762-20148826)
chr8 (1-67)||(1375542-1375608)
chr8 (1-67)||(5754903-5754969)
chr8 (1-67)||(42197469-42197535)
chr8 (1-65)||(29800984-29801048)
chr8 (1-67)||(31384664-31384730)
chr8 (1-67)||(35181516-35181582)
chr8 (1-65)||(26125637-26125701)
chr8 (77-140)||(37425945-37426008)
chr8 (1-67)||(18066752-18066818)
chr8 (1-67)||(34304788-34304854)
chr8 (32-67)||(28977146-28977181)
chr8 (1-67)||(40528668-40528735)
chr8 (229-274)||(37425808-37425853)
chr8 (1-65)||(33630027-33630091)
chr8 (382-410)||(38585180-38585208)
[»] chr7 (27 HSPs)
chr7 (1-67)||(35069721-35069787)
chr7 (1-67)||(5015395-5015461)
chr7 (1-67)||(24001046-24001112)
chr7 (1-67)||(42538465-42538531)
chr7 (1-67)||(42972852-42972918)
chr7 (1-67)||(5810958-5811024)
chr7 (1-65)||(44326180-44326244)
chr7 (1-58)||(32029851-32029908)
chr7 (1-65)||(43343658-43343722)
chr7 (1-65)||(44416968-44417032)
chr7 (1-65)||(10573751-10573815)
chr7 (1-64)||(26898436-26898499)
chr7 (1-67)||(5194265-5194331)
chr7 (1-67)||(9216302-9216367)
chr7 (1-67)||(39998408-39998474)
chr7 (1-67)||(40236919-40236985)
chr7 (10-67)||(41861674-41861731)
chr7 (14-67)||(47279744-47279797)
chr7 (1-65)||(4638233-4638297)
chr7 (1-44)||(38160613-38160656)
chr7 (382-421)||(46297590-46297629)
chr7 (1-51)||(27393294-27393344)
chr7 (1-67)||(31513287-31513353)
chr7 (1-67)||(43317443-43317509)
chr7 (1-59)||(45326028-45326086)
chr7 (1-66)||(31408667-31408732)
chr7 (34-67)||(38160661-38160694)
[»] chr4 (30 HSPs)
chr4 (1-67)||(1771300-1771366)
chr4 (1-67)||(27550309-27550375)
chr4 (1-65)||(43514720-43514784)
chr4 (1-67)||(25051693-25051759)
chr4 (1-67)||(12496956-12497022)
chr4 (1-67)||(27864564-27864630)
chr4 (1-67)||(28982856-28982922)
chr4 (1-67)||(33703141-33703207)
chr4 (1-58)||(39631109-39631167)
chr4 (1-67)||(55966380-55966446)
chr4 (1-65)||(27893876-27893940)
chr4 (1-64)||(23204812-23204875)
chr4 (1-67)||(23035980-23036046)
chr4 (1-67)||(27316747-27316813)
chr4 (1-67)||(28988473-28988539)
chr4 (1-67)||(35017733-35017798)
chr4 (1-58)||(43949835-43949893)
chr4 (1-65)||(3756280-3756344)
chr4 (4-67)||(45490350-45490413)
chr4 (1-67)||(711960-712026)
chr4 (1-67)||(17619186-17619252)
chr4 (1-66)||(41878407-41878472)
chr4 (1-65)||(43735744-43735808)
chr4 (382-421)||(37762782-37762821)
chr4 (9-67)||(21687006-21687064)
chr4 (1-67)||(32728357-32728423)
chr4 (1-67)||(48463484-48463550)
chr4 (1-67)||(55272410-55272476)
chr4 (382-423)||(24060551-24060592)
chr4 (392-429)||(35033017-35033054)
[»] chr2 (25 HSPs)
chr2 (1-67)||(1750414-1750480)
chr2 (1-67)||(16096747-16096813)
chr2 (1-67)||(12302287-12302353)
chr2 (1-66)||(19047158-19047223)
chr2 (1-65)||(43490435-43490499)
chr2 (1-72)||(30838627-30838698)
chr2 (1-58)||(33229310-33229368)
chr2 (1-67)||(43114557-43114623)
chr2 (1-67)||(43335797-43335863)
chr2 (10-67)||(4764769-4764826)
chr2 (10-67)||(18491705-18491762)
chr2 (374-423)||(20142943-20142992)
chr2 (1-65)||(11825688-11825752)
chr2 (382-426)||(38320292-38320336)
chr2 (1-65)||(41282008-41282072)
chr2 (374-421)||(13716794-13716841)
chr2 (28-67)||(42849907-42849946)
chr2 (1-67)||(12415494-12415560)
chr2 (1-67)||(12427554-12427620)
chr2 (1-67)||(16803968-16804034)
chr2 (1-67)||(16843250-16843316)
chr2 (10-67)||(966877-966934)
chr2 (15-66)||(34817824-34817875)
chr2 (24-65)||(7070418-7070459)
chr2 (386-423)||(31645194-31645231)
[»] chr1 (22 HSPs)
chr1 (1-67)||(43571120-43571186)
chr1 (1-67)||(5489776-5489842)
chr1 (1-67)||(48498996-48499062)
chr1 (1-67)||(50448294-50448360)
chr1 (1-67)||(750339-750405)
chr1 (1-67)||(24769533-24769599)
chr1 (1-67)||(37814778-37814844)
chr1 (1-67)||(44112677-44112743)
chr1 (1-67)||(48119628-48119694)
chr1 (10-67)||(14427347-14427404)
chr1 (1-65)||(7447828-7447891)
chr1 (1-67)||(35003294-35003360)
chr1 (374-423)||(10061567-10061616)
chr1 (382-422)||(35149756-35149796)
chr1 (7-67)||(41065153-41065213)
chr1 (1-67)||(23989557-23989624)
chr1 (1-58)||(4401336-4401394)
chr1 (382-416)||(26469926-26469960)
chr1 (1-67)||(35000147-35000213)
chr1 (1-67)||(38335918-38335984)
chr1 (10-67)||(38113238-38113295)
chr1 (1-65)||(2497596-2497660)
[»] chr5 (14 HSPs)
chr5 (8-68)||(33855084-33855144)
chr5 (1-67)||(2614683-2614749)
chr5 (1-67)||(18033982-18034048)
chr5 (1-67)||(22512305-22512371)
chr5 (1-67)||(7617133-7617199)
chr5 (1-67)||(33801469-33801535)
chr5 (79-125)||(39785635-39785681)
chr5 (1-68)||(41334697-41334764)
chr5 (1-65)||(5256997-5257061)
chr5 (9-65)||(25915029-25915085)
chr5 (1-67)||(32473428-32473494)
chr5 (1-67)||(38470579-38470645)
chr5 (374-451)||(39785554-39785632)
chr5 (382-423)||(3040352-3040393)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-67)||(14222-14288)
scaffold0187 (1-67)||(24550-24616)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-66)||(112656-112721)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-67)||(11251-11317)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-67)||(23455-23521)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-65)||(45753-45817)


Alignment Details
Target: scaffold0119 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 751 - 685
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  751 aaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26670043 - 26670109
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  26670043 aaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 26670109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9698367 - 9698433
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  9698367 aaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 9698433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30736048 - 30735984
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  30736048 aaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttt 30735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7273369 - 7273435
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||    
T  7273369 aaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcc 7273435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 26466865 - 26466799
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||| |||||| |||||||    
T  26466865 aaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcc 26466799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24204021 - 24204085
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| ||||||||||||| |||||    
T  24204021 aaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13743255 - 13743321
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| |||||||||| || |||| ||||||| ||||||||||||| |||||||    
T  13743255 aaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13748755 - 13748821
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| |||||||||| || |||| ||||||| ||||||||||||| |||||||    
T  13748755 aaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30014409 - 30014343
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||| ||||||||||| | |||| |||||| |||||||||||||||||||||||||| |||||||    
T  30014409 aaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3213466 - 3213400
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| ||||||||| ||||||||||| | |||| |||||||||||||| |||||| |||||||    
T  3213466 aaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 3213400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21279995 - 21279929
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| | ||| ||||||  ||||| |||||||||||||||||||| |||||||    
T  21279995 aaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttcc 21279929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7292813 - 7292747
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  |||||| |||| |||||| ||||||| ||||||| ||||| |||||||    
T  7292813 aaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcc 7292747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7367615 - 7367549
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| | ||||||||| |||||| ||||||| | ||||||| ||| |||||||    
T  7367615 aaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcc 7367549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31109256 - 31109322
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||| | |||| |||||| |||||| |||| || |||||||||||||||||| |||||||    
T  31109256 aaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttcc 31109322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 27441608 - 27441544
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||| ||||||||  | |||||||| ||||||| || |||||||||||||||||| |||||    
T  27441608 aaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 421
Target Start/End: Original strand, 32871845 - 32871884
Alignment:
Q  382 tttcttgataaattcttgataaaaactctttagagaaata 421  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  32871845 tttcttgataaattcttgataaaaactctctagataaata 32871884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21293711 - 21293777
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| ||||||||| |||||||| ||   |||| |||||||||||||| |||||| |||||||    
T  21293711 aaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcc 21293777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33242469 - 33242403
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| ||| ||||||||| ||||||||||  |||||| || |||| ||||||||||||| |||||||    
T  33242469 aaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcc 33242403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 33253974 - 33253913
Alignment:
Q  6 tccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| |||| |||||||||| ||||||  || |||| ||||||||||||| |||||||    
T  33253974 tccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttcc 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 410
Target Start/End: Complemental strand, 34713517 - 34713489
Alignment:
Q  382 tttcttgataaattcttgataaaaactct 410  Q
    |||||||||||||||||||||||||||||    
T  34713517 tttcttgataaattcttgataaaaactct 34713489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25413747 - 25413681
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25413747 aaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 25413681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42100754 - 42100688
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  42100754 aaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40808931 - 40808865
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| |||||||    
T  40808931 aaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcc 40808865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 46941119 - 46941053
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| |||||||    
T  46941119 aaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcc 46941053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 54246182 - 54246248
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||    
T  54246182 aaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 54246248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 54237162 - 54237097
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttc 66  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  54237162 aaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24688436 - 24688502
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  |||||||||||| |||||| |||||||||||||||||||| |||||||    
T  24688436 aaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 24688502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45126962 - 45127028
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||| |||||| |||||||    
T  45126962 aaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 47191060 - 47191125
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  47191060 aaatatctctaatacatg-ggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 47191125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42394453 - 42394518
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttc 66  Q
    |||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||| ||||||    
T  42394453 aaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4190299 - 4190365
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||| ||||||||| ||||||||||| ||||||| || |||||||||||||||||| |||||||    
T  4190299 aaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 4190365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 1078286 - 1078229
Alignment:
Q  8 cctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||||||||| |||||    
T  1078286 cctaatacattaggtgtacaatgaggtgcaggaataaagggtgttcatgtaacatttt 1078229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 27748629 - 27748565
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    ||||||||||||||||| ||||||| |||| |||||| ||||||| ||||||||||||| |||||    
T  27748629 aaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36150196 - 36150130
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||| ||||||  |||||| ||||||||||| ||||||||||| ||||||||| |||||||    
T  36150196 aaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51757659 - 51757593
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| ||| |||| ||||||||||||||| ||||||| || ||||||||||| ||||||||||||||    
T  51757659 aaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatattttcc 51757593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40480815 - 40480750
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttc 66  Q
    |||||||||||||||||  | ||||||||||||  || ||||||||||||||||||||| ||||||    
T  40480815 aaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 53581892 - 53581956
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||||||||||  | |||||||||| ||||| |||||||| |||||||||||| |||||    
T  53581892 aaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttt 53581956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9434190 - 9434124
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||| |||||||||| | ||||| || |||||||||||||||||| |||||||    
T  9434190 aaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 9434124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10457926 - 10457992
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| |||| |||| |||||||||| ||||||| || |||| ||||||||||||| |||||||    
T  10457926 aaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 10457992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34791895 - 34791829
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||||||| ||||||  |||||| || |||||||||||||||||| |||||||    
T  34791895 aaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 53273718 - 53273784
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| | ||||||||| ||| |||||||||| | ||||||| ||| |||||||    
T  53273718 aaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttcc 53273784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 438
Target Start/End: Original strand, 45853018 - 45853082
Alignment:
Q  374 tgagactgtttcttgataaattcttgataaaaactctttagagaaataacgatacttttttaaaa 438  Q
    ||||||| ||||||||| |||||||||||||| |||| |||| ||||||| || || ||||||||    
T  45853018 tgagactttttcttgattaattcttgataaaatctctatagataaataacaatgctcttttaaaa 45853082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 52629876 - 52629840
Alignment:
Q  31 gggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||||| |||||||||||||||||||||    
T  52629876 gggtgtaggaataaaaggtgttcatgtaatattttcc 52629840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 52628011 - 52628077
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||| | |||| ||||||||||||||| || |||| || ||||||||||||| |||| |||||||    
T  52628011 aaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttcc 52628077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29705428 - 29705362
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  29705428 aaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30912596 - 30912660
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  30912596 aaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42699323 - 42699259
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  42699323 aaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2165997 - 2166063
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  2165997 aaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttcc 2166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2547062 - 2546996
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| |||||||    
T  2547062 aaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 2546996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11582832 - 11582766
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  11582832 aaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36743517 - 36743583
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  36743517 aaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 36743583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42295261 - 42295197
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||| |||||    
T  42295261 aaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30660776 - 30660842
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  30660776 aaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttcc 30660842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45397382 - 45397317
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttc 66  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||| |||| ||||||    
T  45397382 aaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20148826 - 20148762
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||||||| |||||| |||||    
T  20148826 aaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1375608 - 1375542
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||| ||| |||||||||| ||||||| ||||||| ||||||||||||| |||||||    
T  1375608 aaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcc 1375542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5754969 - 5754903
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||| ||| | ||||||||||| |||||||||||| ||||||||||||| |||||||    
T  5754969 aaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcc 5754903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42197469 - 42197535
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||   |||| |||||||||||||||||||| ||||||||||||| |||||||    
T  42197469 aaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcc 42197535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29800984 - 29801048
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||| |||||| |||||| |||||    
T  29800984 aaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 29801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31384730 - 31384664
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||| ||||||||||| |||||||||| |  |||| ||||||||||||||||||||||| |||||    
T  31384730 aaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaatactttcc 31384664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35181582 - 35181516
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||| |||||||||| ||||||| || |||||||||||||||||| |||||||    
T  35181582 aaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35181516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 26125701 - 26125637
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||||||||||  ||||||||||||  |||| |||||||||||||| |||||| |||||    
T  26125701 aaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 37426008 - 37425945
Alignment:
Q  77 ctttgagaagctggtacacttatactacaggtgtacaacaacattgatttgcaatacacctgcc 140  Q
    ||||||||||||||| || ||||| | ||||| ||||||||||||||||||||| |||| ||||    
T  37426008 ctttgagaagctggtgcagttatattgcaggtctacaacaacattgatttgcaacacacttgcc 37425945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18066752 - 18066818
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| | |||||||| |  |||| || |||||||||||||||||| |||||||    
T  18066752 aaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttcc 18066818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34304854 - 34304788
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||| |||||||||| ||||||| || |||||| ||||||||||| |||||||    
T  34304854 aaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcc 34304788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 28977181 - 28977146
Alignment:
Q  32 ggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||||||||||||| |||||||    
T  28977181 ggtgtaggaataaagggtgttcatgtaacattttcc 28977146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40528668 - 40528735
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaat-aaagggtgttcatgtaatattttcc 67  Q
    |||| ||||||||| ||| ||||||||||||||| |  |||| |||||||||||||||| ||||||||    
T  40528668 aaatgtccctaatatatggggtgtacaatggggtttgtgaataaaagggtgttcatgtattattttcc 40528735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 37425853 - 37425808
Alignment:
Q  229 ttgtcaattgctaaatcagttgctcctcctgcaattgatagaatat 274  Q
    ||||||| |||| || |||||||||||||| |||||||||||||||    
T  37425853 ttgtcaaatgctgaagcagttgctcctcctacaattgatagaatat 37425808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33630027 - 33630091
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||| |||||||| |||  ||||||||||| |||||| || |||||||||||| ||||| |||||    
T  33630027 aaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 410
Target Start/End: Original strand, 38585180 - 38585208
Alignment:
Q  382 tttcttgataaattcttgataaaaactct 410  Q
    |||||||||||||||||||||||||||||    
T  38585180 tttcttgataaattcttgataaaaactct 38585208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35069787 - 35069721
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  35069787 aaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcc 35069721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5015461 - 5015395
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| |||||||    
T  5015461 aaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 5015395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24001046 - 24001112
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  24001046 aaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42538465 - 42538531
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  42538465 aaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42972918 - 42972852
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  42972918 aaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5810958 - 5811024
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  5810958 aaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44326244 - 44326180
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||||||| |||||| |||||    
T  44326244 aaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32029851 - 32029908
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgta 58  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  ||||| |||||    
T  32029851 aaatatccctaatacatggggtgtacaatggggtgtaggaataaaaagtgtttatgta 32029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43343658 - 43343722
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||||||||||| |||||||||| |||||||| |||||| | ||||||||||| |||||    
T  43343658 aaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44416968 - 44417032
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||||||||||| |||||||||| |||||||| |||||| | ||||||||||| |||||    
T  44416968 aaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10573815 - 10573751
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||| ||||||||||| |||||||||| || |||| |||||||||||||| |||||| |||||    
T  10573815 aaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26898436 - 26898499
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattt 64  Q
    ||||||||||||||||||   |||||||| ||||||| ||||||| ||||||||||||| ||||    
T  26898436 aaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5194265 - 5194331
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| ||| ||||  ||||||||||| |||||| ||||||| ||||||||||||| |||||||    
T  5194265 aaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 5194331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9216367 - 9216302
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||| ||||| |||| |||||||||| || | |||||||||||||||||||||||| |||||||    
T  9216367 aaatatctctaatgcatg-ggtgtacaataggatataggaataaagggtgttcatgtaacattttcc 9216302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39998474 - 39998408
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| |||||||||| || |||| || ||||  |||||||||||| |||||||    
T  39998474 aaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttcc 39998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40236985 - 40236919
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||| |||||||||| || |||| || |||||||||||||||||| |||||||    
T  40236985 aaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttcc 40236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 41861731 - 41861674
Alignment:
Q  10 taatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||  |||||| ||| ||||||| ||||||||||||||||||||| |||||||    
T  41861731 taatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacattttcc 41861674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 47279744 - 47279797
Alignment:
Q  14 acatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||| ||||||||||||| |||| ||||||||||| || ||||||||||||||    
T  47279744 acatggggtgtacaatgggatgtatgaataaagggtatttatgtaatattttcc 47279797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4638233 - 4638297
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||| ||||| ||| |||||||||| | ||||| ||||||| ||||||||||||| |||||    
T  4638233 aaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38160613 - 38160656
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataa 44  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||    
T  38160613 aaatatccctaatacatggggtgtacaatggagtgtaagaataa 38160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 421
Target Start/End: Complemental strand, 46297629 - 46297590
Alignment:
Q  382 tttcttgataaattcttgataaaaactctttagagaaata 421  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  46297629 tttcttgataaattcttgataaaaactctctagataaata 46297590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27393294 - 27393344
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgt 51  Q
    |||||||||||||||||   ||||||||| || ||||||||||||||||||    
T  27393294 aaatatccctaatacatagagtgtacaataggatgtaggaataaagggtgt 27393344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31513353 - 31513287
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| |||| |||| ||| |||||| ||||||| || ||||| |||||||||||| |||||||    
T  31513353 aaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttcc 31513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43317509 - 43317443
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||  |||  | ||||||||| |||||| ||||||| ||||||||||||| |||||||    
T  43317509 aaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 43317443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45326086 - 45326028
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaa 59  Q
    |||||||||||||| ||| ||||||||||| | |||| ||||||| |||||| ||||||    
T  45326086 aaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaa 45326028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31408667 - 31408732
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttc 66  Q
    |||||||| |||| |||| | |||||||| | ||||| || |||||||||||||||||| ||||||    
T  31408667 aaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 38160661 - 38160694
Alignment:
Q  34 tgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||||||||||| |||||||    
T  38160661 tgtaggaataaagggtgttcatgtaacattttcc 38160694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1771300 - 1771366
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  1771300 aaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1771366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27550375 - 27550309
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||    
T  27550375 aaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43514720 - 43514784
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  43514720 aaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25051759 - 25051693
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| | |||||||    
T  25051759 aaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcc 25051693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12497022 - 12496956
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||| |||||||||| | |||||||||| ||||||||||||||||||||||| ||| |||||||    
T  12497022 aaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27864630 - 27864564
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||| |||||| |||||| |||||||    
T  27864630 aaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcc 27864564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28982856 - 28982922
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||| ||| | |||||||| |||||||| |||||||||||||||||||| |||||||    
T  28982856 aaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcc 28982922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33703207 - 33703141
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| ||||||||||  | ||||| |||||||||||||||||||| |||||||    
T  33703207 aaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 33703141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39631167 - 39631109
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaat-aaagggtgttcatgta 58  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  39631167 aaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggttcatgta 39631109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 55966380 - 55966446
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| | ||||||||||| |||| |||||||||||||| |||||| |||||||    
T  55966380 aaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 55966446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27893876 - 27893940
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||| |||||| |||||| |||||    
T  27893876 aaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23204812 - 23204875
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattt 64  Q
    |||||||||||||||||  | ||||||||||| ||||||||||||| |||||||||||| ||||    
T  23204812 aaatatccctaatacataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23036046 - 23035980
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||| ||  |||||||||| |||||||||||||||||  |||||||||| |||||||    
T  23036046 aaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttcc 23035980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27316747 - 27316813
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| ||||||||| |||||| |||| |||||||||||||||||||||| | ||| |||||||    
T  27316747 aaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttcc 27316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28988539 - 28988473
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||| | |||| ||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  28988539 aaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttcc 28988473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35017798 - 35017733
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||| |||||| ||||||||||| | | |||||||||||||||||||||||| |||||||    
T  35017798 aaatatcccta-tacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43949835 - 43949893
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaat-aaagggtgttcatgta 58  Q
    |||||||||||||||||| ||||||||||| |||| |||||| ||||||||||||||||    
T  43949835 aaatatccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgta 43949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3756280 - 3756344
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||| |||| |||| |||||||||| ||||||| || |||||||||||||||||| |||||    
T  3756280 aaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 45490350 - 45490413
Alignment:
Q  4 tatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||||||||||| || ||||  ||||||  |||||||||||| |||||||    
T  45490350 tatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttcc 45490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 712026 - 711960
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| |||| |||  |||||||||| ||||||| || |||||||||||||||||| |||||||    
T  712026 aaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 711960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17619186 - 17619252
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| |||| |||| |||||||||| ||||||| || |||| ||||||||||||| |||||||    
T  17619186 aaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41878472 - 41878407
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttc 66  Q
    |||||||||||||  ||  ||||||||||| |||||| |||||||| |||||||||||| ||||||    
T  41878472 aaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43735808 - 43735744
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    ||||||| ||||||||||   |||| |||| | |||||||||||||| |||||||||||||||||    
T  43735808 aaatatctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttt 43735744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 421
Target Start/End: Complemental strand, 37762821 - 37762782
Alignment:
Q  382 tttcttgataaattcttgataaaaactctttagagaaata 421  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  37762821 tttcttgataaattcttgatgaaaactctttagataaata 37762782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 21687064 - 21687006
Alignment:
Q  9 ctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||| || |||| |||||||||||  |||||||| ||||||||||| |||||||    
T  21687064 ctaatacataagatgtataatggggtgtaaaaataaaggatgttcatgtaacattttcc 21687006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32728423 - 32728357
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| ||| |||| |||| |||||||||| ||||||| || |||||| ||||||||||| |||||||    
T  32728423 aaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcc 32728357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48463484 - 48463550
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| | |||||||||   |||| ||||||| |||||| |||||| |||||||    
T  48463484 aaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttcc 48463550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 55272410 - 55272476
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| |||| |||| |||||||||| | ||||| || |||||| ||||||||||| |||||||    
T  55272410 aaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 24060592 - 24060551
Alignment:
Q  382 tttcttgataaattcttgataaaaactctttagagaaataac 423  Q
    ||||||||| ||||||||||||||| |||||||| |||||||    
T  24060592 tttcttgatcaattcttgataaaaattctttagataaataac 24060551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Complemental strand, 35033054 - 35033017
Alignment:
Q  392 aattcttgataaaaactctttagagaaataacgatact 429  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  35033054 aattcttgataaaaactctttagataaataacaatact 35033017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1750480 - 1750414
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||    
T  1750480 aaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16096813 - 16096747
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  16096813 aaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12302287 - 12302353
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  12302287 aaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 12302353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19047223 - 19047158
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttc 66  Q
    |||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||| ||||||    
T  19047223 aaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43490435 - 43490499
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||||||||||| |||||    
T  43490435 aaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 30838698 - 30838627
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttccgacaa 72  Q
    |||||||||||||||||| ||||||||||  | ||||| |||||||||||||||||||| ||||||| ||||    
T  30838698 aaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcctacaa 30838627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33229368 - 33229310
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaat-aaagggtgttcatgta 58  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  33229368 aaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgta 33229310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43114623 - 43114557
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||| |||||||||| ||||||| || |||||||||||||||||| |||||||    
T  43114623 aaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 43114557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43335797 - 43335863
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| | ||||||||| |||||||||||||| | ||||||| ||| |||||||    
T  43335797 aaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcc 43335863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 4764769 - 4764826
Alignment:
Q  10 taatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||| |||||||||| ||||||||||||||| |||||| |||||| |||||||    
T  4764769 taatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttcc 4764826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 18491762 - 18491705
Alignment:
Q  10 taatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| ||||||||||||||| ||||||| || |||||||||||||||||| |||||||    
T  18491762 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 18491705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 20142992 - 20142943
Alignment:
Q  374 tgagactgtttcttgataaattcttgataaaaactctttagagaaataac 423  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  20142992 tgagactttttcttgataaattcttgataaaaactctctagataaataac 20142943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11825688 - 11825752
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||| |||||||| |||| |||||||||| ||||||| || |||||||||||||||||| |||||    
T  11825688 aaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 38320292 - 38320336
Alignment:
Q  382 tttcttgataaattcttgataaaaactctttagagaaataacgat 426  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  38320292 tttcttgataaattcttgataaaaactctctagataaataacgat 38320336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41282008 - 41282072
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||| |||||||| |||| |||||||||| ||||||| || |||||||||||||||||| |||||    
T  41282008 aaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 13716794 - 13716841
Alignment:
Q  374 tgagactgtttcttgataaattcttgataaaaactctttagagaaata 421  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||||    
T  13716794 tgagactttttcttgataaattcttgataaaaactctctagataaata 13716841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 42849907 - 42849946
Alignment:
Q  28 atggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  42849907 atggggtgtaggaataaagggtgttcatgtaacattttcc 42849946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12415494 - 12415560
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||| ||||||||||  |||||| || |||||||||||||||||| |||||||    
T  12415494 aaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12427554 - 12427620
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||| ||||||||||  |||||| || |||||||||||||||||| |||||||    
T  12427554 aaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16804034 - 16803968
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||| | |||||||| ||||||| || |||||||||||||||||| |||||||    
T  16804034 aaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 16803968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16843316 - 16843250
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||| | |||||||| ||||||| || |||||||||||||||||| |||||||    
T  16843316 aaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 16843250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 966877 - 966934
Alignment:
Q  10 taatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||| |||||||||| ||||||| || |||||||||||||||||| |||||||    
T  966877 taatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 966934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 34817824 - 34817875
Alignment:
Q  15 catgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttc 66  Q
    |||| ||||||||||| |||||  ||||||||||||||||||||| ||||||    
T  34817824 catggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 7070459 - 7070418
Alignment:
Q  24 tacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    ||||||||| |||| ||||||||||||||||||||| |||||    
T  7070459 tacaatgggatgtatgaataaagggtgttcatgtaacatttt 7070418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 423
Target Start/End: Original strand, 31645194 - 31645231
Alignment:
Q  386 ttgataaattcttgataaaaactctttagagaaataac 423  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  31645194 ttgataaattcttgataaaaactctctagataaataac 31645231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43571120 - 43571186
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  43571120 aaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5489842 - 5489776
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  5489842 aaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 5489776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48498996 - 48499062
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| |||||||    
T  48498996 aaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 48499062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 50448294 - 50448360
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||| |||||||    
T  50448294 aaatatccctaatacataaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 50448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 750339 - 750405
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||| ||||||| ||||||||||||||||||||||  ||||||||||| |||| |||||||    
T  750339 aaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttcc 750405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24769533 - 24769599
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| |||||||||||| |||||| |||||| |||||||||| || |||||||    
T  24769533 aaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttcc 24769599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37814844 - 37814778
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| ||||||||| ||||||||||| | |||| |||||||||||||| |||||| |||||||    
T  37814844 aaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44112743 - 44112677
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||| |||| |||||||||| ||||||| || |||||||||||||||||| |||||||    
T  44112743 aaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 44112677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48119694 - 48119628
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| |||| |||| |||||||||| ||||||| || |||||||||||||||||| |||||||    
T  48119694 aaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 14427404 - 14427347
Alignment:
Q  10 taatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| ||||||||||||||| ||||||| || |||||||||||||||||| |||||||    
T  14427404 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 14427347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7447891 - 7447828
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||  ||||||||| ||||||||||||| |||||||||||||| ||||||||||| |||||    
T  7447891 aaatatctgtaatacatg-ggtgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35003360 - 35003294
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| ||||  ||| |||||||||| ||||||| || |||||||||||||||||| |||||||    
T  35003360 aaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 10061616 - 10061567
Alignment:
Q  374 tgagactgtttcttgataaattcttgataaaaactctttagagaaataac 423  Q
    ||||||| ||| ||||||||||||||||||||||||| |||| |||||||    
T  10061616 tgagacttttttttgataaattcttgataaaaactctctagataaataac 10061567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 35149756 - 35149796
Alignment:
Q  382 tttcttgataaattcttgataaaaactctttagagaaataa 422  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  35149756 tttcttgataaattcttgataaaaactctctagataaataa 35149796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 41065213 - 41065153
Alignment:
Q  7 ccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||| |||| |||||||||  ||||||| || |||||||||||||||||| |||||||    
T  41065213 ccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttcc 41065153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23989557 - 23989624
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaat-aaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||| |||||| | ||||| |||| ||||||||||||||||| |||||||    
T  23989557 aaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttcc 23989624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4401394 - 4401336
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaat-aaagggtgttcatgta 58  Q
    ||||||| |||||||||| |||||||||||  |||||||||| |||| |||||||||||    
T  4401394 aaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgta 4401336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 416
Target Start/End: Complemental strand, 26469960 - 26469926
Alignment:
Q  382 tttcttgataaattcttgataaaaactctttagag 416  Q
    ||||||||||||||||||||||||||||| |||||    
T  26469960 tttcttgataaattcttgataaaaactctctagag 26469926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35000147 - 35000213
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||||||||||||| || |||||| | ||||| || |||| ||||||||||||| |||||||    
T  35000147 aaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacattttcc 35000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38335984 - 38335918
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| |||| |||| | ||||||||  |||||| || |||||||||||||||||| |||||||    
T  38335984 aaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 38113238 - 38113295
Alignment:
Q  10 taatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||| |||| |||||||||| ||||||| || |||||||||||||| ||| |||||||    
T  38113238 taatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttcc 38113295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2497596 - 2497660
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||| ||||| ||| ||||||||||||  |||| ||||||| |||||| |||||| |||||    
T  2497596 aaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

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Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 33855084 - 33855144
Alignment:
Q  8 cctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttccg 68  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33855084 cctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttccg 33855144  T

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Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2614683 - 2614749
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  2614683 aaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

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Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18034048 - 18033982
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18034048 aaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 18033982  T

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Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22512371 - 22512305
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  22512371 aaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

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Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7617199 - 7617133
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||| |||||| ||||| ||||| ||||||||||||||||||||| |||||||    
T  7617199 aaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcc 7617133  T

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Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33801535 - 33801469
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||| ||||||||||| |||||||    
T  33801535 aaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcc 33801469  T

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Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 39785681 - 39785635
Alignment:
Q  79 ttgagaagctggtacacttatactacaggtgtacaacaacattgatt 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39785681 ttgagaagctggtacacttatactacaggtgtacaacaacattgatt 39785635  T

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Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41334697 - 41334764
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttccg 68  Q
    |||||||||||||||||  |||||| |||| |||||| ||||||||||||||||||||| ||||||||    
T  41334697 aaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttccg 41334764  T

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Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5257061 - 5256997
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||| |||||| |||||| |||||    
T  5257061 aaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

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Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25915029 - 25915085
Alignment:
Q  9 ctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||||||| |||||    
T  25915029 ctaatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 25915085  T

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Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32473428 - 32473494
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||||||||| |||| ||||||||||  |||||| || |||||||||||||||||| |||||||    
T  32473428 aaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

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Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38470645 - 38470579
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||| ||||||||| ||||||||||||  |||| |||||||||||||| |||||| |||||||    
T  38470645 aaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcc 38470579  T

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Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 451
Target Start/End: Complemental strand, 39785632 - 39785554
Alignment:
Q  374 tgagactgtttcttgataaattcttgataaaaactctttagagaaataac-gatacttttttaaaagaccgttaatttt 451  Q
    |||||| ||||||||||||||| |||||||||| ||| || | ||||||| ||| |||||| ||||||| |||||||||    
T  39785632 tgagaccgtttcttgataaatttttgataaaaattctctaaataaataactgatgctttttgaaaagactgttaatttt 39785554  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 3040352 - 3040393
Alignment:
Q  382 tttcttgataaattcttgataaaaactctttagagaaataac 423  Q
    ||||||||||||||||||||||||||||| |||  |||||||    
T  3040352 tttcttgataaattcttgataaaaactctctaggtaaataac 3040393  T

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Target: scaffold0187 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14222 - 14288
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||| |||||||    
T  14222 aaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 14288  T

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Target: scaffold0187; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24550 - 24616
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||| |||||||    
T  24550 aaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 24616  T

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Target: scaffold0038 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 112721 - 112656
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttc 66  Q
    |||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||| ||||||    
T  112721 aaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

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Target: scaffold0385 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11317 - 11251
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    |||||||||||||| ||| |||||||||||||||||| |||||||| |||||||||| | |||||||    
T  11317 aaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcc 11251  T

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Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23455 - 23521
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatattttcc 67  Q
    ||||||| |||||||||| | |||||||||| ||||||||||||||||||||||| ||| |||||||    
T  23455 aaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45753 - 45817
Alignment:
Q  1 aaatatccctaatacatgaggtgtacaatggggtgtaggaataaagggtgttcatgtaatatttt 65  Q
    |||||||| ||||||||  | |||||||| ||||||| || |||||||||||||||||| |||||    
T  45753 aaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

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