View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21523_low_5 (Length: 262)
Name: NF21523_low_5
Description: NF21523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21523_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 90 - 245
Target Start/End: Original strand, 23522614 - 23522769
Alignment:
| Q |
90 |
tcattgaaagagaaactcatgacttaatgaatgttgagtcattctctcaacttcccttcatccgtcctcctcctactaacaaagagaaaggcatccgcct |
189 |
Q |
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| T |
23522614 |
tcattgaaagagaaactcatgacttaatgaatgttgagtcattctctcaacttcccttcatccgtcctcctcctactaacaaagagaaaggcatccgcct |
23522713 |
T |
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| Q |
190 |
cttcggtatcgaattcggtggtggcgccaccgaagacgagtcctctgagtctccgg |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23522714 |
cttcggtatcgaattcggtggtggcgccaccgaagacgagtcctctgagtctccgg |
23522769 |
T |
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