View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21527_high_12 (Length: 414)
Name: NF21527_high_12
Description: NF21527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21527_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 25 - 397
Target Start/End: Original strand, 50931765 - 50932134
Alignment:
| Q |
25 |
tacagagagaattgattacttcaagacgacaatcttgttgaatgagaaggttgatccaacgagttccaggcattgattttgtgctaacaactctgtattt |
124 |
Q |
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| T |
50931765 |
tacagagagaattgattacttcaagacgacaatcttgttgaatgagaaggttgatccaacgagttccaggcattgattttgtgctaacaactctgtattt |
50931864 |
T |
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| Q |
125 |
tccatttgggttccatacttgaattgaaactggtttcgccattgaatgagtggagtgagtcaaggtggtgatgaacgaacttttcgtaacgggttgcttt |
224 |
Q |
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| T |
50931865 |
tccatttgggttccatacttgaattgaaactggtttcgccattgaatgagtggagtgagtcaaggtggtgatgaacgaacttttcgtaacgggttgcttt |
50931964 |
T |
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| Q |
225 |
gttgcttannnnnnnnnnnnnnnnnataataataatataagagattgattgactgattcggtgtgaaacagtggataatattaatatgtttctgaccaat |
324 |
Q |
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| T |
50931965 |
gttgctta---tagtagtagtagtaataataataatataagagattgattgactgattcggtgtgaaacagtggataatattaatatgtttctgaccaat |
50932061 |
T |
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| Q |
325 |
gaaattgatggatttagaagactttgactttttggttgcttgatcatggaatgatgatgtgtagaggatttgg |
397 |
Q |
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| T |
50932062 |
gaaattgatggatttagaagactttgactttttggttgcttgatcatggaatgatgatgtgtagaggatttgg |
50932134 |
T |
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