View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21527_high_46 (Length: 239)
Name: NF21527_high_46
Description: NF21527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21527_high_46 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 41655161 - 41654957
Alignment:
| Q |
15 |
gagatgaattatacatttgttgtagaactttacgtctggtggatccaattagttcgcaagtcgtagacataaagctaaactaaaataaactgttttgcag |
114 |
Q |
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| T |
41655161 |
gagatgaattatacatttgttgtagaactttacgtctggtggatccaattagttcgcaagtcgtagacataaagctaaactaaaataaactgttttgcag |
41655062 |
T |
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| Q |
115 |
tgtaattccattcttggattatcatcatcattaccatacctttaaagacaagcatagctcgcaaagatccaaaaagctgttatgataatattttttaaat |
214 |
Q |
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| T |
41655061 |
tttaattccattcttggattatcatcatcattaccatacctttaaagacaagcatagctcgcaaaga--caaaaagctgttatgataatattttttaaat |
41654964 |
T |
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| Q |
215 |
actaact |
221 |
Q |
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||||||| |
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| T |
41654963 |
actaact |
41654957 |
T |
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