View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21527_low_18 (Length: 375)
Name: NF21527_low_18
Description: NF21527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21527_low_18 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 286; Significance: 1e-160; HSPs: 21)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 41 - 358
Target Start/End: Complemental strand, 15020237 - 15019920
Alignment:
| Q |
41 |
tcatcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaa |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15020237 |
tcatcaccaaattaatcttatcaattgaagtcaacatcaaaccaggctgactcctaaatactcgaataacatcttcatcagaccaaccccatttcttaaa |
15020138 |
T |
|
| Q |
141 |
gacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaaccctta |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
15020137 |
gacgtcaactttcttatcccaaagtatgttacccaacaattgcttggtcatcaaagcagtcccaaaagcggtcgttgaaggtttaaaccctaaaccctta |
15020038 |
T |
|
| Q |
241 |
atttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaacca |
340 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15020037 |
atttcctccaataacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaacca |
15019938 |
T |
|
| Q |
341 |
tcaaattgatattagaca |
358 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
15019937 |
tcaaattgatattagaca |
15019920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 41 - 355
Target Start/End: Original strand, 15003699 - 15004013
Alignment:
| Q |
41 |
tcatcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaa |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15003699 |
tcatcaccaaattaatcttatcaattgaagccaacatcaaactaggctgacacctaaatactcgaataacatcttcatcagaccaaccccatttcttaaa |
15003798 |
T |
|
| Q |
141 |
gacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaaccctta |
240 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||| || ||||||||||| |||| |
|
|
| T |
15003799 |
gacgtcaactttcttatcccaaagtattttactcatacattgcttggtcatcaaagcagtcccaaaagtggtcgttgaagcgtcaaaccctaaacactta |
15003898 |
T |
|
| Q |
241 |
atttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaacca |
340 |
Q |
| |
|
| ||||||||||||| |||||| ||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
15003899 |
acttcctccaatgacataatcaaatcctttgaaccaaatatagatggccttttttgaagcaatctagcaatggtagaatcagaaacatcaaaatccacca |
15003998 |
T |
|
| Q |
341 |
tcaaattgatattag |
355 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
15003999 |
tcaaattgatattag |
15004013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 41 - 355
Target Start/End: Complemental strand, 15013742 - 15013428
Alignment:
| Q |
41 |
tcatcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaa |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15013742 |
tcatcaccaaattaatcttatcaattgaagccaacatcaaactaggctgacacctaaatactcgaataacatcttcatcagaccaaccccatttcttaaa |
15013643 |
T |
|
| Q |
141 |
gacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaaccctta |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | | |||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
15013642 |
gacgtcaactttcttatcccaaagtatgttactcatacaatgcttggtcaccaaagcagtcccaaaagcggccgttgaagggtcaaaccctaaaccctta |
15013543 |
T |
|
| Q |
241 |
atttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaacca |
340 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||| | |||||||| ||| |||||||||||||||||||||| ||||||| ||| |||||||||||||| |
|
|
| T |
15013542 |
acgtcctccaatgacttaatcaaatcatttgaacaatatatagatttcctagttcgaagcaatctagcaatggcagaatcacaaactccaaaatcaacca |
15013443 |
T |
|
| Q |
341 |
tcaaattgatattag |
355 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
15013442 |
tcaaattgatattag |
15013428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 51 - 355
Target Start/End: Complemental strand, 31969652 - 31969348
Alignment:
| Q |
51 |
attaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaagacgtcaact |
150 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
31969652 |
attaatcttatcaattgaagtcaacatcaaactaggctgactcctaaatactcgaataacatcttcatcagaccaaccccatttcttaaagacgtcaact |
31969553 |
T |
|
| Q |
151 |
ttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaacccttaatttcctcca |
250 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| || |||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
31969552 |
ttcttatcccaaagtatgttactcatacattgcttggtcaccaaagcagtcccaaatgcgatcgttgaagggtcaaaccctaaacccttaacgtcctcca |
31969453 |
T |
|
| Q |
251 |
atgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaaccatcaaattgat |
350 |
Q |
| |
|
|||||||||||| ||||||||||| | |||||||| ||| |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
31969452 |
atgacttaatcaaatcatttgaacaagatatagatttcctagttcgaagcaatctagcaatggcagaatcataaactccaaaatcaaccatcaaattgat |
31969353 |
T |
|
| Q |
351 |
attag |
355 |
Q |
| |
|
||||| |
|
|
| T |
31969352 |
attag |
31969348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 40 - 355
Target Start/End: Complemental strand, 15008336 - 15008021
Alignment:
| Q |
40 |
atcatcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaa |
139 |
Q |
| |
|
||||||| |||||||||||| ||||| |||| | ||| | | ||| | |||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
15008336 |
atcatcaacaaattaatcttttcaatggaagccaacaaaatattaggataactcctaaatgctcgaataacatcttcatcagaccaaccccatttcttaa |
15008237 |
T |
|
| Q |
140 |
agacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaaccctt |
239 |
Q |
| |
|
|| | |||||||||| |||||||||| | ||||| | || ||||| |||||||||||||||||| || |||||||| | ||||||||||| ||| |
|
|
| T |
15008236 |
aggcatcaactttctcatcccaaagttttttacttaaacctttcttggctgtcaaagcagtcccaaaagtagttgttgaaggatgaaaccctaaacgctt |
15008137 |
T |
|
| Q |
240 |
aatttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaacc |
339 |
Q |
| |
|
|| |||||| ||||||||||||| |||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||| || |
|
|
| T |
15008136 |
aacttcctctaatgacttaatcaaatcagttgaaccaaatatagatggccttttctgaagcaatttagcaatggtagaatcagaaactccaaaaccagtt |
15008037 |
T |
|
| Q |
340 |
atcaaattgatattag |
355 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
15008036 |
atcaaattgatattag |
15008021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 84 - 355
Target Start/End: Complemental strand, 14520607 - 14520339
Alignment:
| Q |
84 |
aggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaagacgtcaactttcttatcccaaagtatgttactcatcaattcc |
183 |
Q |
| |
|
||||||| |||||||||||| || ||| ||| ||||||||| ||||||||||||||||| |||||||||| |||||||||| | ||||| ||| | |
|
|
| T |
14520607 |
aggctgaaacctaaatactcggatgacaacttcatcagaccagccccatttcttaaagacatcaactttctcatcccaaagttttttactac---atttc |
14520511 |
T |
|
| Q |
184 |
ttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaacccttaatttcctccaatgacttaatcatatcatttgaaccaaatatag |
283 |
Q |
| |
|
|||| |||||||||| |||||||| ||| ||||||| | ||||||||||| ||||| |||||| ||||||||||||| |||| ||||||||||||||| |
|
|
| T |
14520510 |
ttggctatcaaagcagccccaaaagtagtctttgaaggatgaaaccctaaacacttaacttcctctaatgacttaatcaaatcagttgaaccaaatatag |
14520411 |
T |
|
| Q |
284 |
atggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaaccatcaaattgatattag |
355 |
Q |
| |
|
||| ||||||| ||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||| |
|
|
| T |
14520410 |
atgaccttgtttgaagcaatctagcaatgttagaatcagaaactccaaattcaatcatcaaattgatattag |
14520339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 41 - 358
Target Start/End: Complemental strand, 14529269 - 14528952
Alignment:
| Q |
41 |
tcatcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaa |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||| ||| ||||| ||| |||||| ||||||||| | | | |||||||||||||||||||||||| |
|
|
| T |
14529269 |
tcatcaccaaattaatcttatcaattgaagccaacaacaattcaggccgacatctaaatgctcgaataatagcctcatcagaccaaccccatttcttaaa |
14529170 |
T |
|
| Q |
141 |
gacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaaccctta |
240 |
Q |
| |
|
| |||| ||||| |||||||||| | |||||||| ||| ||||| ||||||||||||||||||| ||| ||||||| | |||||||||| ||||| |
|
|
| T |
14529169 |
ggtatcaattttctcatcccaaagttttttactcatacatttcttggccatcaaagcagtcccaaaattagtcattgaaggatgaaaccctaaatcctta |
14529070 |
T |
|
| Q |
241 |
atttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaacca |
340 |
Q |
| |
|
| |||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||| ||| |||| | |||||||| |||||||||| || |
|
|
| T |
14529069 |
acttcctccaatgacttaatcaaatcctttgaaccaaatatagacggccttgactgaagcaaactaccaataacattatcagaaactccaaaatcagaca |
14528970 |
T |
|
| Q |
341 |
tcaaattgatattagaca |
358 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
14528969 |
tcaaattgatattagaca |
14528952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 42 - 355
Target Start/End: Complemental strand, 14547635 - 14547322
Alignment:
| Q |
42 |
catcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaag |
141 |
Q |
| |
|
|||||| ||||||||||| |||||||||||| ||||||||| ||| || ||||||| || ||| || | || ||||||||||||||||||||||||| |
|
|
| T |
14547635 |
catcacaaaattaatcttttcaattgaagtcaacatcaaactaggatgcaacctaaatgcttgaaaaaaagtttcatcagaccaaccccatttcttaaag |
14547536 |
T |
|
| Q |
142 |
acgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaacccttaa |
241 |
Q |
| |
|
||| | ||||||| |||||| || | |||||||| ||| ||||| | |||||||| |||||||| | ||||||||| | ||||||||||| ||||| |
|
|
| T |
14547535 |
acggcgactttctcatcccatcgtgttttactcatacatttcttggcgaacaaagcagccccaaaagtagccgttgaaggatcaaaccctaaacacttaa |
14547436 |
T |
|
| Q |
242 |
tttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaaccat |
341 |
Q |
| |
|
|||||||||||||||||||| |||| | ||||||||||||||||||||| || ||||||| ||||||||| ||||||||||| |||||||||| ||| |
|
|
| T |
14547435 |
cttcctccaatgacttaatcaaatcagtcgaaccaaatatagatggccttttttgaagcaagctagcaatgacagaatcagaaactccaaaatcagtcat |
14547336 |
T |
|
| Q |
342 |
caaattgatattag |
355 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
14547335 |
caaattgatattag |
14547322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 41 - 355
Target Start/End: Complemental strand, 14534494 - 14534180
Alignment:
| Q |
41 |
tcatcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaa |
140 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||| | |||| |||| ||||||| | || |||||||||| ||||||||||||||||||||| || |
|
|
| T |
14534494 |
tcatcaccaaattaatcttttcaattgaagtcaacatcatatcaggatgacacctaaatgcccggataacatcttcatcagaccaaccccatttcttcaa |
14534395 |
T |
|
| Q |
141 |
gacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaaccctta |
240 |
Q |
| |
|
||| |||||||||| |||||||||| | |||||| | | | |||| | ||||||| |||||||| ||||||||||| | |||||||||||||||| |
|
|
| T |
14534394 |
gacatcaactttctcatcccaaagttttttactcgtacagttattggctaacaaagcatacccaaaagtagtcgttgaaggatcaaaccctaaaccctta |
14534295 |
T |
|
| Q |
241 |
atttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaacca |
340 |
Q |
| |
|
|||||||||||||| ||||||| ||| ||||||| || || | |||| || | ||||| ||||||||||||| ||||| || || |||||||||| || |
|
|
| T |
14534294 |
atttcctccaatgaattaatcaaatcctttgaacaaattaaaaatggtctagatcgaatcaatctagcaatgacagaatgaggaattccaaaatcagtca |
14534195 |
T |
|
| Q |
341 |
tcaaattgatattag |
355 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
14534194 |
tcaaattgatattag |
14534180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 41 - 358
Target Start/End: Complemental strand, 14543495 - 14543178
Alignment:
| Q |
41 |
tcatcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaa |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||| ||| |||| ||| |||||| ||||||||| | | | |||||||||||||||||||||||| |
|
|
| T |
14543495 |
tcatcaccaaattaatcttatcaattgaagccaacaacaattcaggacgacatctaaatgctcgaataatagcctcatcagaccaaccccatttcttaaa |
14543396 |
T |
|
| Q |
141 |
gacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaaccctta |
240 |
Q |
| |
|
| |||| ||||| |||||||||| | |||||||| ||| ||||| ||||||||||||||||||| ||| ||||||| | |||||||||| ||||| |
|
|
| T |
14543395 |
ggtatcaattttctcatcccaaagttttttactcatacatttcttggccatcaaagcagtcccaaaattagtcattgaaggatgaaaccctaaatcctta |
14543296 |
T |
|
| Q |
241 |
atttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaacca |
340 |
Q |
| |
|
| |||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||| ||| |||| | |||||||| |||||||||| || |
|
|
| T |
14543295 |
acttcctccaatgacttaatcaaatcctttgaaccaaatatagacggccttgactgaagcaaactaccaataacattatcagaaactccaaaatcagaca |
14543196 |
T |
|
| Q |
341 |
tcaaattgatattagaca |
358 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
14543195 |
tcaaattgatattagaca |
14543178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 41 - 355
Target Start/End: Complemental strand, 14552846 - 14552532
Alignment:
| Q |
41 |
tcatcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaa |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||| |||| ||| |||||| ||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14552846 |
tcatcaccaaattaatcttatcaattgaagtcaacaacaagtcaggacgacctctaaatgctcgaataacatcttcatcagaccaaccccatttcttaaa |
14552747 |
T |
|
| Q |
141 |
gacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaaccctta |
240 |
Q |
| |
|
||| |||||||||| |||||||||| | |||||||| || ||||| |||||||||| |||||||| || ||| || | |||||||||||| ||| |
|
|
| T |
14552746 |
gacatcaactttctcatcccaaagttttttactcatacctttcttggctatcaaagcagccccaaaagtagtgattgggggatgaaaccctaaaccttta |
14552647 |
T |
|
| Q |
241 |
atttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaacca |
340 |
Q |
| |
|
| |||||||||||||||||||| ||| ||||||| |||||||||||| | || ||||||||||||||||| ||||| ||| | ||||||||| || |
|
|
| T |
14552646 |
acttcctccaatgacttaatcaaatcctttgaacaaaatatagatggtttaatttgaagcaatctagcaatgacagaatgagacacgccaaaatcagaca |
14552547 |
T |
|
| Q |
341 |
tcaaattgatattag |
355 |
Q |
| |
|
||| ||| ||||||| |
|
|
| T |
14552546 |
tcagattaatattag |
14552532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 41 - 336
Target Start/End: Complemental strand, 15024272 - 15023977
Alignment:
| Q |
41 |
tcatcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaa |
140 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||| ||| ||| |||||||||||| || || || || || |||||||||||||||||||||||| |
|
|
| T |
15024272 |
tcatcaccaaattaatcttatcaattgaaaccaacattaaattaggttgactcctaaatgcttcaacaatattttcatcagaccaaccccatttcttaaa |
15024173 |
T |
|
| Q |
141 |
gacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaaccctta |
240 |
Q |
| |
|
| ||||||||||| |||||||||| | |||||||| || ||||| | ||||||| |||||||| | |||||||| | ||||||||||| |||| |
|
|
| T |
15024172 |
ggtgtcaactttctcatcccaaagttttttactcatacctttcttggctaccaaagcaaccccaaaagaagctgttgaaggatcaaaccctaaactctta |
15024073 |
T |
|
| Q |
241 |
atttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatca |
336 |
Q |
| |
|
| |||||||||||||||||||| ||| ||||||||||||||||||||| | || ||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
15024072 |
acttcctccaatgacttaatcaaatcctttgaaccaaatatagatggcttattttgaagcaatctagcaatgacagaatcagaaactccaaaatca |
15023977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 104 - 358
Target Start/End: Complemental strand, 14512756 - 14512502
Alignment:
| Q |
104 |
gaataacatctttatcagaccaaccccatttcttaaagacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtccc |
203 |
Q |
| |
|
|||||||| ||| | |||||||||||| |||||||||||| ||||||||||||||||||||| | ||| |||| || ||||| |||||||||| || |
|
|
| T |
14512756 |
gaataacagcttcaccagaccaaccccgtttcttaaagacatcaactttcttatcccaaagttttttagtcatacctttcttggctatcaaagcagccct |
14512657 |
T |
|
| Q |
204 |
aaaagccgtcgttgaagggttaaaccctaaacccttaatttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaat |
303 |
Q |
| |
|
||||| ||| |||||| | |||||||||| |||||| |||||| ||||||||||||| ||| ||||||||||||||||| ||||||| ||||||| |
|
|
| T |
14512656 |
aaaagtagtcaatgaaggatgaaaccctaaatccttaacttcctctaatgacttaatcaaatcctttgaaccaaatatagacggccttgactgaagcaaa |
14512557 |
T |
|
| Q |
304 |
ctagcaatggtagaatcagaaaatccaaaatcaaccatcaaattgatattagaca |
358 |
Q |
| |
|
||| |||| | |||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
14512556 |
ctaccaataacattatcagaaactccaaaatcagacatcaaattgatattagaca |
14512502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 92 - 355
Target Start/End: Original strand, 14850206 - 14850469
Alignment:
| Q |
92 |
tcctaaatactcgaataacatctttatcagaccaaccccatttcttaaagacgtcaactttcttatcccaaagtatgttactcat-caattccttggtca |
190 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||| | ||||||| | ||| ||| | |
|
|
| T |
14850206 |
tcctaaatactcgaataacatcttcatcagaccaaccccatttcttaaaggcatcaactttctcatcccaaagttttttactcaaacctttctttgctgc |
14850305 |
T |
|
| Q |
191 |
tcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaacccttaatttcctccaatgacttaatcatatcatttgaaccaaatatagatggcct |
290 |
Q |
| |
|
| |||||| | |||||| || ||||||| | ||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||| |||||||| |
|
|
| T |
14850306 |
t-aaagcaattccaaaactattctttgaaggatcaaaccctaaacacttaacttcctccaatgacttaatcaaatcctttgaaccaaatacagatggcca |
14850404 |
T |
|
| Q |
291 |
tgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaaccatcaaattgatattag |
355 |
Q |
| |
|
|| |||||| ||||||||| | |||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
14850405 |
tgactgaagcatactagcaatgacattatcagaaactccaaaatcagtcatcaaattgatattag |
14850469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 43 - 337
Target Start/End: Complemental strand, 14525406 - 14525112
Alignment:
| Q |
43 |
atcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaaga |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||| |||| ||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | |
|
|
| T |
14525406 |
atcaccaaattaatcttatcaattgaagtcaacaacaattcaggacgacctctaaatgctcgaataacatcttcatcagtccaaccccatttcttaaaaa |
14525307 |
T |
|
| Q |
143 |
cgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaacccttaat |
242 |
Q |
| |
|
| |||||||||| |||||||||| | |||||||| ||| ||| | | |||||| | |||||||| | |||||| ||| ||||||||||||||||| |
|
|
| T |
14525306 |
catcaactttctcatcccaaagtgttttactcatacatttctttgcaaccaaagctgccccaaaagttgaagttgaaaggtgaaaccctaaacccttaac |
14525207 |
T |
|
| Q |
243 |
ttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatcaa |
337 |
Q |
| |
|
||||||||| | |||| | |||| |||| |||| ||||| ||| ||||| ||||||||||||||| | |||||| ||| |||| |||||| |
|
|
| T |
14525206 |
ttcctccaaagtactaatgaaatcaattgatccaagtatagctggtcttgtcaaaagcaatctagcaatagcggaatcacaaactccataatcaa |
14525112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 104 - 354
Target Start/End: Complemental strand, 14567822 - 14567572
Alignment:
| Q |
104 |
gaataacatctttatcagaccaaccccatttcttaaagacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtccc |
203 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||||| | |||||||||| ||||||| || | || ||||| ||| ||||| ||||||| ||| |
|
|
| T |
14567822 |
gaataacagcttcatcagaccaaccccatttcttaaaggcatcaactttctcatcccaacgtttttttctcatacatttcttggctgccaaagcaacccc |
14567723 |
T |
|
| Q |
204 |
aaaagccgtcgttgaagggttaaaccctaaacccttaatttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaat |
303 |
Q |
| |
|
||||| | |||||||| | ||||||||||| ||||| |||||||||||||||||||| || |||||||||| |||||||||||||| ||||||| |
|
|
| T |
14567722 |
aaaagaagctgttgaaggatcaaaccctaaactcttaacttcctccaatgacttaatcaattcctttgaaccaactatagatggccttgactgaagcaaa |
14567623 |
T |
|
| Q |
304 |
ctagcaatggtagaatcagaaaatccaaaatcaaccatcaaattgatatta |
354 |
Q |
| |
|
||||||||| | |||||||| |||||||||| ||||||||||| |||| |
|
|
| T |
14567622 |
ctagcaatgacattatcagaaactccaaaatcagacatcaaattgacatta |
14567572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 336
Target Start/End: Original strand, 14847450 - 14847740
Alignment:
| Q |
41 |
tcatcaccaaattaatcttatcaattgaagtcgacatcaaaccaggctgactcctaaatactcgaataacatctttatcagaccaaccccatttcttaaa |
140 |
Q |
| |
|
||||||||||||||||||| | || ||||| | ||||||||| || ||| ||||||| || ||| || | ||| |||||||||||||| ||||| ||| |
|
|
| T |
14847450 |
tcatcaccaaattaatcttttgaactgaagccaacatcaaactagactgcaacctaaatgcttgaaaaatagcttcatcagaccaaccccgtttctcaaa |
14847549 |
T |
|
| Q |
141 |
gacgtcaactttcttatcccaaagtatgttactcatcaattccttggtcatcaaagcagtcccaaaagccgtcgttgaagggttaaaccctaaaccctta |
240 |
Q |
| |
|
||| ||||||| || ||||||| || | |||||| | ||| ||||| ||||| | || ||| |||| ||| ||||||| | ||| |||||||| ||| |
|
|
| T |
14847550 |
gacatcaactt-ctcatcccaacgtgttttactcctacatttcttggctatcaaggaagccccgaaagtagtcattgaaggatcaaaacctaaaccgtta |
14847648 |
T |
|
| Q |
241 |
atttcctccaatgacttaatcatatcatttgaaccaaatatagatggccttgttcgaagcaatctagcaatggtagaatcagaaaatccaaaatca |
336 |
Q |
| |
|
| |||||| ||||||||||| | || || |||||||||||||| |||| || ||||||||||| ||||||||||||| ||| |||||||||| |
|
|
| T |
14847649 |
a---cctcca-tgacttaatcaaaccagtttgaccaaatatagatgaccttttttgaagcaatctatcaatggtagaatcgcaaactccaaaatca |
14847740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 14485693 - 14485650
Alignment:
| Q |
109 |
acatctttatcagaccaaccccatttcttaaagacgtcaacttt |
152 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
14485693 |
acatcttcatcagaccatccccatttcttaaagacatcaacttt |
14485650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 14168644 - 14168689
Alignment:
| Q |
117 |
atcagaccaaccccatttcttaaagacgtcaactttcttatcccaa |
162 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
14168644 |
atcagaccaaccccatttcttaaagacaacaactttcgcatcccaa |
14168689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 14480917 - 14480965
Alignment:
| Q |
106 |
ataacatctttatcagaccaaccccatttcttaaagacgtcaactttct |
154 |
Q |
| |
|
|||| ||||| ||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
14480917 |
ataatatcttcatcagaccaaccccacttcttaaaggcatcaactttct |
14480965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 14495162 - 14495102
Alignment:
| Q |
94 |
ctaaatactcgaataacatctttatcagaccaaccccatttcttaaagacgtcaactttct |
154 |
Q |
| |
|
|||||| || ||| |||||||| ||| ||||||||||||||||| ||| | |||||||||| |
|
|
| T |
14495162 |
ctaaatgcttgaagaacatcttcatccgaccaaccccatttcttcaaggcatcaactttct |
14495102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6663215 - 6663259
Alignment:
| Q |
1 |
ctcaccctcctccaattcccctttctctttttcatcatcatcatc |
45 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
6663215 |
ctcaccctcctccaactccccttcctctttttcatcatcatcatc |
6663259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49315231 - 49315272
Alignment:
| Q |
1 |
ctcaccctcctccaattcccctttctctttttcatcatcatc |
42 |
Q |
| |
|
||||||||||||||| ||||||| |||||| ||||||||||| |
|
|
| T |
49315231 |
ctcaccctcctccaactccccttcctctttatcatcatcatc |
49315272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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