View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21528_low_1 (Length: 692)

Name: NF21528_low_1
Description: NF21528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21528_low_1
NF21528_low_1
[»] chr6 (40 HSPs)
chr6 (63-692)||(22702948-22703577)
chr6 (63-622)||(21401709-21402254)
chr6 (63-629)||(29490812-29491385)
chr6 (292-622)||(21396653-21396983)
chr6 (221-622)||(34375873-34376270)
chr6 (221-629)||(24191126-24191531)
chr6 (221-629)||(24192223-24192628)
chr6 (63-338)||(22697772-22698044)
chr6 (233-611)||(34142041-34142418)
chr6 (233-611)||(34154657-34155034)
chr6 (221-611)||(2817901-2818277)
chr6 (221-611)||(31981528-31981904)
chr6 (410-622)||(22698172-22698386)
chr6 (63-210)||(2817401-2817548)
chr6 (63-210)||(34142781-34142928)
chr6 (63-210)||(34155397-34155544)
chr6 (63-210)||(6727777-6727924)
chr6 (63-210)||(34376464-34376611)
chr6 (63-210)||(24190654-24190802)
chr6 (63-210)||(31983475-31983622)
chr6 (473-586)||(19478138-19478251)
chr6 (476-586)||(13605087-13605197)
chr6 (349-469)||(6728285-6728394)
chr6 (475-587)||(10642698-10642811)
chr6 (483-586)||(3901902-3902006)
chr6 (479-576)||(12182998-12183096)
chr6 (13-59)||(22699738-22699784)
chr6 (480-576)||(5600971-5601068)
chr6 (543-616)||(6728397-6728472)
chr6 (476-586)||(17281558-17281669)
chr6 (221-274)||(6728193-6728246)
chr6 (473-554)||(31476007-31476088)
chr6 (473-522)||(31495833-31495882)
chr6 (473-522)||(31501219-31501268)
chr6 (481-525)||(12689022-12689066)
chr6 (481-556)||(17964559-17964635)
chr6 (481-525)||(24589164-24589208)
chr6 (473-586)||(29325525-29325639)
chr6 (473-522)||(31515723-31515772)
chr6 (481-525)||(11614092-11614136)
[»] chr4 (55 HSPs)
chr4 (63-629)||(8984987-8985553)
chr4 (63-629)||(13700457-13701023)
chr4 (63-622)||(21304535-21305094)
chr4 (63-629)||(8979867-8980433)
chr4 (63-629)||(21299415-21299981)
chr4 (63-629)||(54991433-54991989)
chr4 (221-629)||(41393192-41393584)
chr4 (211-629)||(51019117-51019521)
chr4 (63-357)||(54990392-54990686)
chr4 (221-616)||(53797589-53797970)
chr4 (221-627)||(9763771-9764167)
chr4 (221-611)||(13710634-13711010)
chr4 (89-338)||(39999363-39999609)
chr4 (89-338)||(40004321-40004567)
chr4 (89-338)||(54343497-54343743)
chr4 (89-338)||(54348651-54348897)
chr4 (221-611)||(13695124-13695503)
chr4 (221-611)||(47046060-47046438)
chr4 (89-293)||(36359664-36359868)
chr4 (89-338)||(36354436-36354682)
chr4 (410-629)||(36359239-36359460)
chr4 (410-622)||(54348309-54348523)
chr4 (409-629)||(36354121-36354343)
chr4 (410-622)||(40003979-40004193)
chr4 (410-622)||(39999021-39999235)
chr4 (410-622)||(54343155-54343369)
chr4 (89-210)||(53798329-53798450)
chr4 (63-210)||(41393858-41394005)
chr4 (89-210)||(51018732-51018853)
chr4 (63-210)||(9763273-9763420)
chr4 (63-210)||(13695757-13695904)
chr4 (63-210)||(13711370-13711517)
chr4 (63-210)||(4207042-4207188)
chr4 (473-584)||(653035-653146)
chr4 (473-586)||(10120801-10120914)
chr4 (90-210)||(47045647-47045767)
chr4 (473-565)||(8083019-8083112)
chr4 (13-59)||(13699067-13699113)
chr4 (13-59)||(21301325-21301371)
chr4 (476-585)||(24490022-24490132)
chr4 (13-59)||(36357870-36357916)
chr4 (13-59)||(40002798-40002844)
chr4 (13-59)||(54346932-54346978)
chr4 (481-576)||(37259877-37259973)
chr4 (13-59)||(8981777-8981823)
chr4 (13-59)||(13702945-13702991)
chr4 (479-587)||(34644546-34644655)
chr4 (481-576)||(31269033-31269129)
chr4 (637-692)||(12889052-12889107)
chr4 (475-561)||(17359546-17359633)
chr4 (502-586)||(39319621-39319706)
chr4 (419-464)||(54990687-54990732)
chr4 (481-566)||(31765895-31765981)
chr4 (481-525)||(10318779-10318823)
chr4 (481-525)||(51697968-51698012)
[»] chr5 (44 HSPs)
chr5 (63-629)||(17510005-17510571)
chr5 (63-622)||(42019527-42020086)
chr5 (89-629)||(17504900-17505440)
chr5 (89-629)||(41858541-41859071)
chr5 (89-499)||(43579737-43580147)
chr5 (282-629)||(41853496-41853842)
chr5 (221-630)||(36253772-36254177)
chr5 (63-363)||(42024566-42024866)
chr5 (221-629)||(1413806-1414200)
chr5 (221-622)||(26709056-26709444)
chr5 (221-622)||(26978790-26979178)
chr5 (221-611)||(24776563-24776945)
chr5 (221-611)||(24771108-24771487)
chr5 (89-199)||(41853846-41853956)
chr5 (90-210)||(1413100-1413220)
chr5 (89-210)||(36254517-36254638)
chr5 (63-210)||(24770605-24770752)
chr5 (94-210)||(26709688-26709804)
chr5 (94-210)||(26979422-26979538)
chr5 (120-210)||(24776116-24776206)
chr5 (473-584)||(13582682-13582793)
chr5 (473-584)||(14374127-14374238)
chr5 (473-584)||(24435861-24435972)
chr5 (473-581)||(7805066-7805174)
chr5 (481-587)||(28857850-28857958)
chr5 (13-59)||(17508630-17508676)
chr5 (13-59)||(41857149-41857195)
chr5 (13-59)||(42023542-42023588)
chr5 (629-692)||(36607110-36607173)
chr5 (13-59)||(24772849-24772895)
chr5 (481-576)||(37248795-37248891)
chr5 (481-576)||(26667271-26667367)
chr5 (481-576)||(26938868-26938964)
chr5 (481-576)||(29167973-29168069)
chr5 (481-576)||(36423636-36423732)
chr5 (481-566)||(12103034-12103120)
chr5 (481-594)||(31986708-31986822)
chr5 (481-576)||(556694-556790)
chr5 (481-576)||(561466-561562)
chr5 (481-576)||(36428708-36428804)
chr5 (481-576)||(36937511-36937607)
chr5 (481-576)||(36942265-36942361)
chr5 (481-565)||(35679875-35679960)
chr5 (481-525)||(10759820-10759864)
[»] scaffold0517 (2 HSPs)
scaffold0517 (89-629)||(3510-4050)
scaffold0517 (13-59)||(2120-2166)
[»] chr1 (36 HSPs)
chr1 (89-631)||(37409145-37409687)
chr1 (89-629)||(37404026-37404564)
chr1 (89-629)||(27716390-27716930)
chr1 (63-561)||(27711319-27711836)
chr1 (89-596)||(11250731-11251228)
chr1 (221-616)||(5730065-5730446)
chr1 (221-611)||(3584566-3584942)
chr1 (336-629)||(11387666-11387978)
chr1 (89-292)||(34317840-34318043)
chr1 (89-338)||(36684270-36684516)
chr1 (211-629)||(48246427-48246823)
chr1 (323-616)||(5724939-5725221)
chr1 (410-622)||(36684644-36684858)
chr1 (417-628)||(34318160-34318373)
chr1 (63-210)||(5725365-5725512)
chr1 (63-210)||(3585301-3585448)
chr1 (64-210)||(5730771-5730917)
chr1 (89-210)||(48245998-48246119)
chr1 (473-584)||(10106095-10106206)
chr1 (473-586)||(38734265-38734378)
chr1 (473-586)||(39747157-39747270)
chr1 (473-584)||(13890805-13890916)
chr1 (473-586)||(5602417-5602530)
chr1 (475-586)||(26651160-26651271)
chr1 (473-565)||(14582110-14582202)
chr1 (89-148)||(50959010-50959069)
chr1 (13-59)||(27715000-27715046)
chr1 (13-59)||(37405908-37405954)
chr1 (481-565)||(25188272-25188357)
chr1 (588-629)||(27711274-27711315)
chr1 (481-576)||(10135455-10135551)
chr1 (473-586)||(19422866-19422983)
chr1 (13-59)||(5728674-5728721)
chr1 (475-562)||(33055052-33055139)
chr1 (481-576)||(51041463-51041557)
chr1 (541-581)||(8267891-8267931)
[»] chr3 (60 HSPs)
chr3 (96-629)||(17368666-17369199)
chr3 (89-622)||(55128743-55129276)
chr3 (221-611)||(54270609-54270986)
chr3 (221-611)||(34128923-34129299)
chr3 (221-611)||(4117345-4117730)
chr3 (221-616)||(3482166-3482560)
chr3 (221-611)||(17357801-17358179)
chr3 (221-616)||(3476699-3477083)
chr3 (221-622)||(10321396-10321784)
chr3 (63-338)||(20090191-20090463)
chr3 (63-338)||(20095316-20095588)
chr3 (89-338)||(15762585-15762831)
chr3 (89-338)||(15767746-15767992)
chr3 (410-629)||(30341773-30341993)
chr3 (410-618)||(20090591-20090801)
chr3 (410-618)||(20095716-20095926)
chr3 (410-622)||(15762959-15763173)
chr3 (410-622)||(15768120-15768334)
chr3 (63-210)||(3481649-3481796)
chr3 (473-611)||(17364028-17364168)
chr3 (89-210)||(34128437-34128558)
chr3 (89-210)||(17358566-17358686)
chr3 (89-210)||(30338126-30338247)
chr3 (63-210)||(30341204-30341351)
chr3 (89-210)||(54271312-54271433)
chr3 (120-210)||(3476249-3476339)
chr3 (120-210)||(4117007-4117097)
chr3 (473-586)||(33089335-33089448)
chr3 (473-586)||(13022017-13022130)
chr3 (473-586)||(20810362-20810475)
chr3 (473-586)||(38436983-38437096)
chr3 (473-586)||(53119517-53119630)
chr3 (473-586)||(26962049-26962162)
chr3 (480-587)||(2617255-2617363)
chr3 (13-59)||(3478439-3478485)
chr3 (13-59)||(15764511-15764557)
chr3 (13-59)||(17362634-17362680)
chr3 (13-59)||(17367276-17367322)
chr3 (13-59)||(20092142-20092188)
chr3 (221-309)||(30338506-30338595)
chr3 (479-525)||(21494300-21494346)
chr3 (481-576)||(758368-758464)
chr3 (481-576)||(23666123-23666219)
chr3 (481-576)||(24038371-24038467)
chr3 (481-576)||(39775728-39775824)
chr3 (475-522)||(795399-795446)
chr3 (497-566)||(1688902-1688972)
chr3 (486-559)||(25023929-25024003)
chr3 (530-576)||(25726843-25726889)
chr3 (479-587)||(27605133-27605242)
chr3 (481-576)||(3672583-3672679)
chr3 (481-576)||(3692615-3692711)
chr3 (221-272)||(30341720-30341771)
chr3 (483-525)||(26706835-26706877)
chr3 (481-549)||(1741109-1741178)
chr3 (246-291)||(10321816-10321861)
chr3 (481-522)||(27708988-27709029)
chr3 (481-525)||(18472056-18472100)
chr3 (481-525)||(23661464-23661508)
chr3 (481-525)||(32474680-32474724)
[»] chr2 (31 HSPs)
chr2 (63-629)||(40392266-40392832)
chr2 (89-629)||(40518075-40518620)
chr2 (221-629)||(28751483-28751877)
chr2 (89-338)||(42728175-42728421)
chr2 (90-293)||(42723007-42723210)
chr2 (89-338)||(44096596-44096842)
chr2 (89-280)||(44754161-44754352)
chr2 (89-280)||(44759327-44759518)
chr2 (92-280)||(40519929-40520122)
chr2 (410-622)||(42723380-42723594)
chr2 (410-622)||(42728549-42728763)
chr2 (410-630)||(44096246-44096468)
chr2 (410-622)||(44754525-44754739)
chr2 (410-622)||(44759691-44759905)
chr2 (63-210)||(4162895-4163042)
chr2 (63-210)||(28751021-28751168)
chr2 (221-400)||(4163331-4163507)
chr2 (476-586)||(42914632-42914742)
chr2 (478-566)||(5089288-5089376)
chr2 (13-59)||(42724940-42724986)
chr2 (13-59)||(44756092-44756138)
chr2 (481-576)||(30658262-30658358)
chr2 (578-617)||(4163525-4163564)
chr2 (481-576)||(9180724-9180820)
chr2 (481-576)||(10160724-10160820)
chr2 (504-584)||(19538377-19538458)
chr2 (481-576)||(9189803-9189899)
chr2 (637-692)||(36594228-36594283)
chr2 (532-584)||(28854996-28855048)
chr2 (475-565)||(39542912-39543004)
chr2 (485-525)||(42926763-42926803)
[»] chr7 (48 HSPs)
chr7 (221-616)||(2234384-2234765)
chr7 (221-629)||(16539166-16539559)
chr7 (221-629)||(16626103-16626496)
chr7 (221-611)||(12934363-12934738)
chr7 (221-622)||(21080793-21081182)
chr7 (221-616)||(43892816-43893210)
chr7 (221-616)||(42571904-42572286)
chr7 (63-338)||(33238296-33238568)
chr7 (89-338)||(47994094-47994340)
chr7 (221-611)||(17495367-17495744)
chr7 (221-611)||(17557470-17557847)
chr7 (233-611)||(32212419-32212784)
chr7 (63-293)||(33243515-33243745)
chr7 (89-338)||(47999269-47999515)
chr7 (221-616)||(19309365-19309746)
chr7 (385-616)||(47177024-47177256)
chr7 (410-622)||(33237954-33238168)
chr7 (410-622)||(33243131-33243345)
chr7 (410-618)||(47998931-47999141)
chr7 (410-620)||(47993754-47993966)
chr7 (63-210)||(21080321-21080468)
chr7 (89-210)||(2233978-2234099)
chr7 (63-210)||(32211965-32212112)
chr7 (63-210)||(42572600-42572747)
chr7 (89-210)||(17496100-17496221)
chr7 (89-210)||(17556993-17557114)
chr7 (63-210)||(12935084-12935231)
chr7 (63-210)||(19308876-19309023)
chr7 (63-210)||(47176496-47176643)
chr7 (509-630)||(22857715-22857836)
chr7 (89-203)||(16538699-16538813)
chr7 (89-203)||(16626849-16626963)
chr7 (63-210)||(43893542-43893689)
chr7 (473-586)||(9973452-9973565)
chr7 (473-586)||(24528344-24528457)
chr7 (473-566)||(33226424-33226517)
chr7 (63-142)||(47544749-47544828)
chr7 (473-586)||(28292496-28292607)
chr7 (13-59)||(33241732-33241778)
chr7 (13-59)||(47997529-47997575)
chr7 (629-688)||(5888399-5888458)
chr7 (637-690)||(36935090-36935143)
chr7 (221-309)||(47176904-47176993)
chr7 (481-576)||(4579507-4579603)
chr7 (481-585)||(8076040-8076145)
chr7 (481-576)||(23246933-23247029)
chr7 (481-576)||(26341198-26341294)
chr7 (481-585)||(12254069-12254174)
[»] scaffold0594 (2 HSPs)
scaffold0594 (221-629)||(8962-9356)
scaffold0594 (63-210)||(8534-8681)
[»] scaffold0060 (2 HSPs)
scaffold0060 (211-631)||(36956-37361)
scaffold0060 (152-210)||(37654-37712)
[»] chr8 (39 HSPs)
chr8 (221-622)||(21643835-21644222)
chr8 (211-629)||(24884660-24885064)
chr8 (307-611)||(17955626-17955919)
chr8 (89-338)||(32010820-32011066)
chr8 (221-611)||(43998984-43999360)
chr8 (89-338)||(32015994-32016240)
chr8 (63-318)||(2165394-2165650)
chr8 (341-622)||(42514245-42514515)
chr8 (410-629)||(32015645-32015866)
chr8 (221-495)||(21643395-21643652)
chr8 (63-210)||(43998546-43998693)
chr8 (63-210)||(17955134-17955281)
chr8 (89-210)||(24885324-24885445)
chr8 (221-388)||(21641520-21641684)
chr8 (221-388)||(21641895-21642059)
chr8 (221-388)||(21642270-21642434)
chr8 (221-388)||(21643020-21643184)
chr8 (63-210)||(42513848-42513995)
chr8 (221-388)||(21642645-21642809)
chr8 (473-586)||(19430004-19430117)
chr8 (473-586)||(19435506-19435619)
chr8 (473-586)||(19566153-19566266)
chr8 (473-586)||(19571655-19571768)
chr8 (473-576)||(33616719-33616822)
chr8 (120-210)||(21641184-21641273)
chr8 (473-586)||(31030518-31030631)
chr8 (529-629)||(32010483-32010585)
chr8 (480-566)||(13584360-13584454)
chr8 (13-59)||(21645574-21645620)
chr8 (13-59)||(32014255-32014301)
chr8 (637-692)||(38148704-38148759)
chr8 (229-292)||(42514182-42514245)
chr8 (410-464)||(32010605-32010659)
chr8 (637-692)||(20519763-20519818)
chr8 (481-525)||(43302718-43302762)
chr8 (481-576)||(44925923-44926019)
chr8 (481-566)||(15875668-15875754)
chr8 (17-57)||(19434003-19434043)
chr8 (17-57)||(19570152-19570192)
[»] scaffold0166 (5 HSPs)
scaffold0166 (221-616)||(13493-13877)
scaffold0166 (221-611)||(18946-19328)
scaffold0166 (63-210)||(12986-13133)
scaffold0166 (120-210)||(18500-18590)
scaffold0166 (13-59)||(15233-15279)
[»] scaffold0014 (5 HSPs)
scaffold0014 (89-338)||(31839-32085)
scaffold0014 (89-338)||(26667-26913)
scaffold0014 (410-629)||(31492-31711)
scaffold0014 (410-622)||(26325-26539)
scaffold0014 (13-59)||(30102-30148)
[»] scaffold0055 (2 HSPs)
scaffold0055 (89-338)||(3318-3564)
scaffold0055 (410-629)||(3003-3224)
[»] scaffold0052 (2 HSPs)
scaffold0052 (89-338)||(80971-81217)
scaffold0052 (410-629)||(81311-81532)
[»] scaffold0011 (2 HSPs)
scaffold0011 (473-566)||(1575-1668)
scaffold0011 (473-566)||(7056-7149)
[»] scaffold0132 (2 HSPs)
scaffold0132 (474-586)||(2765-2877)
scaffold0132 (474-586)||(10725-10837)
[»] scaffold0165 (1 HSPs)
scaffold0165 (13-59)||(15542-15588)
[»] scaffold0067 (1 HSPs)
scaffold0067 (481-586)||(33968-34074)
[»] scaffold0352 (1 HSPs)
scaffold0352 (481-576)||(7103-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (481-576)||(9887-9983)
[»] scaffold0002 (1 HSPs)
scaffold0002 (481-576)||(4073-4169)
[»] scaffold0057 (1 HSPs)
scaffold0057 (481-525)||(35685-35729)


Alignment Details
Target: chr6 (Bit Score: 533; Significance: 0; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 533; E-Value: 0
Query Start/End: Original strand, 63 - 692
Target Start/End: Original strand, 22702948 - 22703577
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22702948 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 22703047  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703048 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 22703147  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  22703148 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttattg 22703247  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  22703248 agtggtctacgtaccatattagagtggttttttgaaacttttcgaaaaccatattgaggtgttattctcgagtgatttctgacagtgcagcctttaatcg 22703347  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  22703348 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgac 22703447  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaacactactgaataggatgagggacgccggagatgag 662  Q
     |   || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  22703448 ataatcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaacactaccgaataggatgagggacgccggaggtgag 22703547  T
Q  663 gtgatgcggaggctgcgcctcgtcgcacca 692  Q
    ||||||||||||||||||||||||||||||    
T  22703548 gtgatgcggaggctgcgcctcgtcgcacca 22703577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 63 - 622
Target Start/End: Complemental strand, 21402254 - 21401709
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21402254 ggaacactagtgtataatgaaaaaaacttggagtatagtagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21402155  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  21402154 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagcttgggaatagtattcatcactcaaaaac 21402055  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    | |||||||||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21402054 taagaatcgaatactcttctttggttttctctcctctcttctccctcctgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 21401955  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21401954 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 21401855  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| |               ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  21401854 tacagttag--------------aatcctggagacggcgcggttgctagtctaccttccacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 21401769  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 622  Q
    |||| || |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  21401768 ctggtcgtgactcatcccggtaatagtttcaaagctctatcgtaattttcaaattacaaa 21401709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 63 - 629
Target Start/End: Original strand, 29490812 - 29491385
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29490812 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcttttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 29490911  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcggg--aata----gtattc-ttcact 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    ||||    || ||  ||||||    
T  29490912 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagag-tggtttaaatactcagttttggttcact 29491010  T
Q  256 ccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttgg 355  Q
    ||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  29491011 ccaaaactgagaatcaaatactcttctctgattttatctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttttttcctccttctttgg 29491110  T
Q  356 tttatcgagtggtctacgtaccatattagagtggtttt-tcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacc 454  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29491111 tttatcgagtggtctacgtaccatattagagtggttttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcc 29491210  T
Q  455 tttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaag 554  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  29491211 tttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag 29491310  T
Q  555 aaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  29491311 aaagcgacttggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacacaaacaaca 29491385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 292 - 622
Target Start/End: Complemental strand, 21396983 - 21396653
Alignment:
Q  292 tctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtt 391  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21396983 tctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtt 21396884  T
Q  392 tttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcct 491  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  21396883 tttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcct 21396784  T
Q  492 ggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagttt 591  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  21396783 ggagatggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagttt 21396684  T
Q  592 caaagctctgtcgtaattttcaaattacaaa 622  Q
    |||||||||||||||||||||||||||||||    
T  21396683 caaagctctgtcgtaattttcaaattacaaa 21396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 221 - 622
Target Start/End: Complemental strand, 34376270 - 34375873
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  34376270 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 34376175  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  ||||||| |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||    
T  34376174 tgttgacgaaccgttcttttcttcctccctctttggtttctcgagtggtctgcgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactga 34376076  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| ||||| ||    
T  34376075 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctaatctacgtt 34375976  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 619  Q
    |||||||  |||||||||||||||||||||||||||||||||||||  || ||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  34375975 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccgataatagtttcaaaactccgtcgtaattttcaaattac 34375876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 221 - 629
Target Start/End: Original strand, 24191126 - 24191531
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24191126 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 24191221  T
Q  320 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 418  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  24191222 tgttgacgaaccgtttttttctttcctccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactg 24191320  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 518  Q
    |||||||||||||||| |||||||||||||||| ||||||||| ||||||| | |||||||||||||||||||||||||||||||||| |||||||||||    
T  24191321 aggtgttattctcgagagatttctggcagtgcagcctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttactagtctacct 24191420  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttca-aagctctgtcgtaattttcaaatt 617  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||| |||||||||||||| |||||||||    
T  24191421 tgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagcttcataagctctgtcgtaa-tttcaaatt 24191519  T
Q  618 acaaatacaaca 629  Q
    ||||| ||||||    
T  24191520 acaaaaacaaca 24191531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 221 - 629
Target Start/End: Original strand, 24192223 - 24192628
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24192223 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 24192318  T
Q  320 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 418  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  24192319 tgttgacgaaccgtttttttctttcctccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactg 24192417  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 518  Q
    |||||||||||||||| |||||||||||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  24192418 aggtgttattctcgagagatttctggcagtgcagcctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 24192517  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttca-aagctctgtcgtaattttcaaatt 617  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||| |||||||||||||| |||||||||    
T  24192518 tgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagcttcataagctctgtcgtaa-tttcaaatt 24192616  T
Q  618 acaaatacaaca 629  Q
     |||| ||||||    
T  24192617 tcaaaaacaaca 24192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 63 - 338
Target Start/End: Original strand, 22697772 - 22698044
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697772 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 22697871  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697872 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 22697971  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  22697972 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 22698044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 233 - 611
Target Start/End: Complemental strand, 34142418 - 34142041
Alignment:
Q  233 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggtttatgttgacgaacc 331  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    ||||| ||||||||||||    
T  34142418 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttgtgttgacgaacc 34142323  T
Q  332 gttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattct 430  Q
    ||||||| ||| |||||||||||||||| |||||| |||| || ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  34142322 gttcttttcttccctccttctttggtttctcgagttgtctgcgaaccatattagagtggtttttcgaa--ttttcgaaa-ccatactgaggtgttattct 34142226  T
Q  431 cgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggag 530  Q
    |||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  34142225 cgagcgatttctagcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgg 34142126  T
Q  531 gtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc----aaagctctgtcgtaatttt 611  Q
    |||| ||| ||||||||||||||||||||||||||| || ||||||||||||||| ||||||    | |||||||||||||||||    
T  34142125 gtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaacagtttcatatatagctctgtcgtaatttt 34142041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 233 - 611
Target Start/End: Complemental strand, 34155034 - 34154657
Alignment:
Q  233 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggtttatgttgacgaacc 331  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    ||||| ||||||||||||    
T  34155034 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttgtgttgacgaacc 34154939  T
Q  332 gttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattct 430  Q
    ||||||| ||| |||||||||||||||| |||||| |||| || ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  34154938 gttcttttcttccctccttctttggtttctcgagttgtctgcgaaccatattagagtggtttttcgaa--ttttcgaaa-ccatactgaggtgttattct 34154842  T
Q  431 cgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggag 530  Q
    |||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  34154841 cgagcgatttctagcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgg 34154742  T
Q  531 gtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc----aaagctctgtcgtaatttt 611  Q
    |||| ||| ||||||||||||||||||||||||||| || ||||||||||||||| ||||||    | |||||||||||||||||    
T  34154741 gtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaacagtttcatatatagctctgtcgtaatttt 34154657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 221 - 611
Target Start/End: Original strand, 2817901 - 2818277
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| ||||||||||||||   |||||| ||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  2817901 tataaatagagagctcgggaatgagattctttactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 2817996  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  2817997 tgttgacgaaccgttcttttcttcctccttgtttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 2818085  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   | ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  2818086 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagaaagaatctgagctgttttatcctggagacggcgcggtttctagtctacctt 2818185  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    |||||||  |||||||  ||| ||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||    
T  2818186 gcacaacttaggtagtaacgcaaaacgtcttaaagaaagcgacctggtcgtgattcacctcggtaatagtttcaaagctctgtcgtaatttt 2818277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 221 - 611
Target Start/End: Complemental strand, 31981904 - 31981528
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  31981904 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 31981809  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 418  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  31981808 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 31981720  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgcggttgctagtctac 516  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||   | |||||| |||||||||||||||||||||||||||||||||||||    
T  31981719 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttttagaatctggcctgttttatcctggagacggcgcggttgctagtctac 31981620  T
Q  517 cttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    |||||||||   |||||||||||||||||||||||||||||||||||||| || |||||||||||||||   |||| ||||||||||||||||||    
T  31981619 cttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaa---tttcgaagctctgtcgtaatttt 31981528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 410 - 622
Target Start/End: Original strand, 22698172 - 22698386
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  22698172 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 22698271  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  22698272 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 22698371  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  22698372 ttttcaaattacaaa 22698386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 2817401 - 2817548
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2817401 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 2817500  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  2817501 aattgaaaatttaatgtcccacattgggtagatcacacactctagtag 2817548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 34142928 - 34142781
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  34142928 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 34142829  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34142828 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 34142781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 34155544 - 34155397
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  34155544 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 34155445  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34155444 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 34155397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 6727777 - 6727924
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  6727777 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 6727876  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  6727877 aattgaaaattttatgttccacattgggtagatcacacactctagtag 6727924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 34376611 - 34376464
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  34376611 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 34376512  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  34376511 aattgaaaattttatgtcccacattgggtagataacacactctagtag 34376464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 24190654 - 24190802
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  24190654 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 24190753  T
Q  163 aattgaaaa-ttttatgtcccacatcgggtagatcacacactctagtag 210  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24190754 aattgaaaatttttatgtcccacattgggtagatcacacactctagtag 24190802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 31983622 - 31983475
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||| ||||||||||||||    
T  31983622 ggaacactagtgtatattggcaaaaacttggagtatactagtttttatgaggagacattggaatgtaaacacaatgatgtagaaattagtgtaaagtgtg 31983523  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  31983522 aattgaaaattttatgtcccgcattgggtagatcacacactctagtag 31983475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 19478251 - 19478138
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||| || ||    
T  19478251 atctgggctgttttatcgtggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19478152  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  19478151 ctcaacccggtaat 19478138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 476 - 586
Target Start/End: Original strand, 13605087 - 13605197
Alignment:
Q  476 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactc 575  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| ||| |||| | || |||||    
T  13605087 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtgactc 13605186  T
Q  576 accccggtaat 586  Q
    | |||||||||    
T  13605187 aacccggtaat 13605197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 349 - 469
Target Start/End: Original strand, 6728285 - 6728394
Alignment:
Q  349 tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagt 448  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||           |||| ||||||||||||||||||||||||||||||||    
T  6728285 tctttggtttctcgagtggtctacgtgccatattagactggtttttcgaaac-----------catactgaggtgttattctcgagcgatttctggcagt 6728373  T
Q  449 gcaacctttaatcgtacagtt 469  Q
    ||| |||||||||||||||||    
T  6728374 gcagcctttaatcgtacagtt 6728394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 587
Target Start/End: Complemental strand, 10642811 - 10642698
Alignment:
Q  475 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggagg-tagtgccgcgaaacgtcttaaagaaagcgacctgggcgggac 573  Q
    ||||| |||||||||| |||| ||||||||||| ||||||||||||||||||   || ||||||| ||||||||||||||||||||||| | | || |||    
T  10642811 ctgggatgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgac 10642712  T
Q  574 tcaccccggtaata 587  Q
    ||| ||||||||||    
T  10642711 tcaacccggtaata 10642698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 483 - 586
Target Start/End: Complemental strand, 3902006 - 3901902
Alignment:
Q  483 ttttatcctggagacggcgcggttgctagtctaccttgcacaacggagg-tagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccg 581  Q
    ||||||||||||| ||||||||||| || ||||||||||||||    || ||||||||| |||||||||||||| |||||||||| || |||||| ||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccg 3901907  T
Q  582 gtaat 586  Q
    |||||    
T  3901906 gtaat 3901902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 576
Target Start/End: Original strand, 12182998 - 12183096
Alignment:
Q  479 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    |||||||||| |||||| || |||||||| |||||||| |||||||| |   |||||||||||||||||||||||||| |||||||||| || ||||||    
T  12182998 gctgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 12183096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 22699738 - 22699784
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22699738 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 22699784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 480 - 576
Target Start/End: Original strand, 5600971 - 5601068
Alignment:
Q  480 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    |||||||||| ||||| ||||||||||| || |||||||| ||||| |   ||||||| ||||||||||||||||||||||||||||| || ||||||    
T  5600971 ctgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5601068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 6728397 - 6728472
Alignment:
Q  543 aacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 616  Q
    |||||||||||||||||||||||| || |||||||||||||||| |||||  |||||||| |||||||||| ||||    
T  6728397 aacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattgtttcaaaaagctctatcgtaatttttaaat 6728472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 476 - 586
Target Start/End: Original strand, 17281558 - 17281669
Alignment:
Q  476 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa---cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||  || ||  ||||||| ||||||||||| |||||   |||  |||||||||||||||||||||||||||||||| ||  || ||    
T  17281558 tgggctgttttatcctaaaggcgatgcggttgttagtctaccttacacaaatacgg--gtagtgccgcgaaacgtcttaaagaaagcgacatgctcgtga 17281655  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  17281656 ctcaacccggtaat 17281669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 6728193 - 6728246
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaat 274  Q
    ||||||| |||||||||||||| | ||||||||||||||||| |||||||||||    
T  6728193 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaat 6728246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 554
Target Start/End: Original strand, 31476007 - 31476088
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaag 554  Q
    ||||| ||||||||||||||||||||||| ||||| ||||  |||||||| |||  |  ||||||||| |||| ||||||||    
T  31476007 atctgagctgttttatcctggagacggcgtggttgttagttgaccttgcataacttaaatagtgccgccaaacatcttaaag 31476088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 522
Target Start/End: Original strand, 31495833 - 31495882
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgca 522  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||| |||||    
T  31495833 atctgggctgttttatcctggagacggcgtggttgttagtttactttgca 31495882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 522
Target Start/End: Original strand, 31501219 - 31501268
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgca 522  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||| |||||    
T  31501219 atctgggctgttttatcctggagacggcgtggttgttagtttactttgca 31501268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 12689066 - 12689022
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||    
T  12689066 tgttttatcctggagacggcgtggttgatagtctgccttgcacaa 12689022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 556
Target Start/End: Original strand, 17964559 - 17964635
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacggagg-tagtgccgcgaaacgtcttaaagaa 556  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    || ||||||| |||||||||||||||||    
T  17964559 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagaa 17964635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 525
Target Start/End: Original strand, 24589164 - 24589208
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||    
T  24589164 tgttttatcctggagacggcgtggttgatagtctatcttgcacaa 24589208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 29325639 - 29325525
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggg 571  Q
    ||||||||| ||||||| ||||| || | | |||| ||||||||||||||| |||  |||||||| ||  |||||||||||| | |||||| ||  || |    
T  29325639 atctgggctattttatcttggaggcgtcacagttgttagtctaccttgcacaaacttaggtagtgtcgtaaaacgtcttaaaaagagcgacttgatcgtg 29325540  T
Q  572 actcaccccggtaat 586  Q
    ||||| |||||||||    
T  29325539 actcaacccggtaat 29325525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 522
Target Start/End: Original strand, 31515723 - 31515772
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgca 522  Q
    |||| |||||||||||||||||||||||| ||||| |||| ||| |||||    
T  31515723 atctaggctgttttatcctggagacggcgtggttgttagtttactttgca 31515772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 525
Target Start/End: Original strand, 11614092 - 11614136
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  11614092 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 11614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 506; Significance: 0; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 63 - 629
Target Start/End: Original strand, 8984987 - 8985553
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8984987 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8985086  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985087 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 8985186  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8985187 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 8985286  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8985287 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 8985386  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  8985387 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 8985486  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8985487 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaacacaaca 8985553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 63 - 629
Target Start/End: Complemental strand, 13701023 - 13700457
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13701023 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 13700924  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700923 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 13700824  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13700823 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 13700724  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13700723 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 13700624  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  13700623 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 13700524  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13700523 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 13700457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 503; E-Value: 0
Query Start/End: Original strand, 63 - 622
Target Start/End: Original strand, 21304535 - 21305094
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304535 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21304634  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304635 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 21304734  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21304735 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 21304834  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304835 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 21304934  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  21304935 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaaagtcttaaagaaagcgac 21305034  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 622  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21305035 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 21305094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 63 - 629
Target Start/End: Original strand, 8979867 - 8980433
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8979867 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8979966  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8979967 aattgaaaattttatgtcccatatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgagaatagtattcttcactccaaaac 8980066  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8980067 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 8980166  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8980167 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 8980266  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  8980267 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 8980366  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8980367 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 8980433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 63 - 629
Target Start/End: Original strand, 21299415 - 21299981
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21299415 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtg 21299514  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21299515 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactccaaaac 21299614  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21299615 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 21299714  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21299715 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 21299814  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  21299815 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 21299914  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21299915 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 21299981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 63 - 629
Target Start/End: Complemental strand, 54991989 - 54991433
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991989 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 54991890  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  54991889 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgaaagctcgggaatagtattcttcacttcaaaac 54991790  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  54991789 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttcttttctccttctttggtttatcg 54991690  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    |||||| ||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54991689 agtggtttacgtaccatattagagtggtttttc----------gaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 54991600  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  54991599 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 54991500  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  54991499 ctggtcgtgactcaccccggtaatagtttcaaagctttgtcgtaattttcaaattacaaaaacaaca 54991433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 221 - 629
Target Start/End: Complemental strand, 41393584 - 41393192
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttat 320  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| || ||| ||||| ||    ||||| |    
T  41393584 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctcccc-ctcatctccatc----ggtttgt 41393490  T
Q  321 gttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgag 420  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||           |||||||||    
T  41393489 gttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgaaccatattagagtggtttttcgaaac-----------catattgag 41393401  T
Q  421 gtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 520  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41393400 gtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgtgctgttttatcctggagacggcgcggttgctagtctaccttg 41393301  T
Q  521 cacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 620  Q
    ||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41393300 cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 41393201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 211 - 629
Target Start/End: Original strand, 51019117 - 51019521
Alignment:
Q  211 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 309  Q
    ||||||||  ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    
T  51019117 aaatcctctctataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 51019216  T
Q  310 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 409  Q
        ||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||             
T  51019217 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac--------- 51019303  T
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
      |||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||    
T  51019304 --catattgaagtgttattctcgagcgatttctggcaatgcagcatttaatcgtacagttagaatctgggatgttttatcctggagacggcgcggttgct 51019401  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatt 609  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  51019402 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 51019501  T
Q  610 ttcaaattacaaatacaaca 629  Q
    |||||||||||||| |||||    
T  51019502 ttcaaattacaaattcaaca 51019521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 63 - 357
Target Start/End: Original strand, 54990392 - 54990686
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    ||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54990392 ggaacactaatgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaagtgtg 54990491  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  54990492 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaattctccttataaattgagagctcgggtatagtattcttcactccaaaac 54990591  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtt 357  Q
    |||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54990592 tgagaatcaaatactcttctcttgttttctctcctctctactccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtt 54990686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 221 - 616
Target Start/End: Complemental strand, 53797970 - 53797589
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  53797970 tataaatagagagctcgggattagcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 53797875  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    ||||||||||| |||||||  |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||           ||||||||    
T  53797874 tgttgacgaactgttcttttcttcctccttctttggttttttgagtggtctacgtgccatattagagtggtttttcgaaac-----------catattga 53797786  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  53797785 ggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 53797686  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 616  Q
    ||||||   |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||    
T  53797685 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttaaaat 53797589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 221 - 627
Target Start/End: Original strand, 9763771 - 9764167
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttat 320  Q
    ||||||| |||||||||||| | ||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| |||  ||  ||||||||||| |    
T  9763771 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatcctcttctctggttttctcccct-tctcatc--tcccgcggtttgt 9763867  T
Q  321 gttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggttttt-cgaaacttttcgaaaaccatattga 419  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||| ||       |||||||||||||||| ||||||||||||||| |||||||||    
T  9763868 gttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtata-------tattagagtggttttttcgaaacttttcgaaa-ccatattga 9763959  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  9763960 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctagagacggtgcggttgttagtctacctt 9764059  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 619  Q
    |||||||  |||||||||| |||||| |||||||| | ||||||||| || ||||| ||| ||||||||||||||| ||| |||||||||||||||||||    
T  9764060 gcacaacttaggtagtgccacgaaacatcttaaagtaggcgacctggtcgtgactctccctggtaatagtttcaaacctccgtcgtaattttcaaattac 9764159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 221 - 611
Target Start/End: Complemental strand, 13711010 - 13710634
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  13711010 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 13710915  T
Q  320 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 418  Q
    |||||||||||| ||||||  |||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||           |||| ||    
T  13710914 tgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaac-----------catactg 13710826  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 518  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  13710825 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 13710726  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||| |||| |||||| |||||||||||    
T  13710725 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcga-ctggtcgtgactcaccccggtaatattttcgaagctccgtcgtaatttt 13710634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 39999609 - 39999363
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39999609 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 39999510  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39999509 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 39999410  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  39999409 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 39999363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 40004567 - 40004321
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40004567 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 40004468  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40004467 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 40004368  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  40004367 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 40004321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 54343743 - 54343497
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54343743 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 54343644  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54343643 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 54343544  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  54343543 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 54343497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 54348897 - 54348651
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54348897 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 54348798  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54348797 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 54348698  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  54348697 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 54348651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 221 - 611
Target Start/End: Complemental strand, 13695503 - 13695124
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  13695503 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 13695408  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 418  Q
    ||||||| |||| ||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  13695407 tgttgacaaaccattcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 13695319  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgcggttgctagtctac 516  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||   | |||| |||||||||||||||||||||||||||||||||||||||    
T  13695318 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttttagaatctaggctgttttatcctggagacggcgcggttgctagtctac 13695219  T
Q  517 cttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||| ||||||  ||||||||||    
T  13695218 cttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactcaccccggtaatattttcgaagctccctcgtaatttt 13695124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 221 - 611
Target Start/End: Original strand, 47046060 - 47046438
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| |||||||||||  |||| |||||||||||| ||| ||| ||||||||  |    ||     
T  47046060 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcatcttctctggttttctccccttctcatctccctcagg----ttg 47046155  T
Q  320 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 418  Q
    ||||||||||||||||||| ||| ||||| |||||||||| ||| ||||||| ||| |||||||||||||||||| ||||||||||||||| ||||| ||    
T  47046156 tgttgacgaaccgttcttttcttccctccctctttggtttctcgggtggtctgcgtgccatattagagtggtttt-cgaaacttttcgaaa-ccatactg 47046253  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 518  Q
    |||||||||||||||||||||||||||||||         ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  47046254 aggtgttattctcgagcgatttctggcagtg---------atcgtacagtttgaatctgagctgttttatcctggagacggcgcggttgctagtctacct 47046344  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgtaatttt 611  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| ||| | |||||||||||||| ||||    
T  47046345 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactcaccccggtaattgttccaaaagctctgtcgtattttt 47046438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 89 - 293
Target Start/End: Complemental strand, 36359868 - 36359664
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36359868 cttggagtatactagtgagtttgtggagcctttgaaatgttaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36359769  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36359768 ggtagatcacacactctagtagaaattctccttataaattgagagctcaggaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 36359669  T
Q  289 ttctc 293  Q
    |||||    
T  36359668 ttctc 36359664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 36354682 - 36354436
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36354682 cttggagtatactagtgaatttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36354583  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36354582 ggtagatcacacactctagtagaaatcctctttataaattgagagctcagaaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 36354483  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  36354482 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 36354436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 410 - 629
Target Start/End: Complemental strand, 36359460 - 36359239
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  36359460 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 36359361  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaa-gctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| |||||||||||||||||| ||||  ||||| |    
T  36359360 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaggctccatcgtata 36359261  T
Q  608 ttttcaaattacaaatacaaca 629  Q
    ||||||||||||||| ||||||    
T  36359260 ttttcaaattacaaaaacaaca 36359239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 410 - 622
Target Start/End: Complemental strand, 54348523 - 54348309
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  54348523 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 54348424  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  54348423 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 54348324  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  54348323 ttttcaaattacaaa 54348309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 409 - 629
Target Start/End: Complemental strand, 36354343 - 36354121
Alignment:
Q  409 aaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgc 508  Q
    |||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  36354343 aaccatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgc 36354244  T
Q  509 tagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaa-gctctgtcgta- 606  Q
    |||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| |||| ||||||||||||| ||||  |||||     
T  36354243 tagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccgataatagtttcaaaggctccatcgtat 36354144  T
Q  607 attttcaaattacaaatacaaca 629  Q
    ||||| |||||||||| ||||||    
T  36354143 atttttaaattacaaaaacaaca 36354121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 410 - 622
Target Start/End: Complemental strand, 40004193 - 40003979
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  40004193 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 40004094  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| ||||||   ||||| |    
T  40004093 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 40003994  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  40003993 ttttcaaattacaaa 40003979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 410 - 622
Target Start/End: Complemental strand, 39999235 - 39999021
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  39999235 accatatcgaggtgtcattctcgagcgatttctggcagtgtagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 39999136  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| ||||||   ||||| |    
T  39999135 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 39999036  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  39999035 ttttcaaattacaaa 39999021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 410 - 622
Target Start/End: Complemental strand, 54343369 - 54343155
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||| ||||||||||||||||    
T  54343369 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctgtagacggcgcggttgct 54343270  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||    |||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  54343269 agtctaccttgcacaattcgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 54343170  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  54343169 ttttcaaattacaaa 54343155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 53798450 - 53798329
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  53798450 cttggagtatactagttggtttgtggagcctttggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcctacattg 53798351  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  53798350 ggtagatcacacactctagtag 53798329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 41394005 - 41393858
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41394005 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtgaagcctttggaatgtaaacacaaggatggaaaaactagtgtaaagtgtg 41393906  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  41393905 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 41393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 51018732 - 51018853
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||||| |||||||||   | ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  51018732 cttggaatatactagttgttatgtggagactttggaatgtacacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 51018831  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  51018832 ggtagatcacacactctagtag 51018853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 9763273 - 9763420
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||  ||    
T  9763273 ggaacactagtgtatattggcataaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagcatg 9763372  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  9763373 aattgaaaattttatgtcccacattgagtagatcacacactctagtag 9763420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 13695904 - 13695757
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  13695904 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13695805  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13695804 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13695757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 13711517 - 13711370
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  13711517 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13711418  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13711417 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 4207188 - 4207042
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||| ||||| |||| ||||||||||||||||||||    
T  4207188 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaa-cacaatgatgtagaaactagtgtaaagtgtg 4207090  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4207089 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 4207042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 473 - 584
Target Start/End: Complemental strand, 653146 - 653035
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||||||||||||||| |||||||||| || ||    
T  653146 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 653047  T
Q  573 ctcaccccggta 584  Q
    |||| |||||||    
T  653046 ctcatcccggta 653035  T

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Target: chr4; HSP #35
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 473 - 586
Target Start/End: Original strand, 10120801 - 10120914
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||  || ||    
T  10120801 atctgggctattttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtga 10120900  T
Q  573 ctcaccccggtaat 586  Q
    |||| || ||||||    
T  10120901 ctcaacctggtaat 10120914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 47045647 - 47045767
Alignment:
Q  90 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 189  Q
    |||||||||||||||   | || |||| | || |||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||| ||    
T  47045647 ttggagtatactagttgttatgaggagacattagaatgtaaacacaatgaaatagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 47045746  T
Q  190 gtagatcacacactctagtag 210  Q
     ||||||||||||||||||||    
T  47045747 atagatcacacactctagtag 47045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 565
Target Start/End: Original strand, 8083019 - 8083112
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacggaggtagtgccgcgaaacgtcttaaagaaagcgacctg 565  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||   | |||||||| ||||||||||||||| |||||||||    
T  8083019 atctgggctgttttatcttggaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctg 8083112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 13699113 - 13699067
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13699113 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 13699067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 21301325 - 21301371
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21301325 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 21301371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 585
Target Start/End: Complemental strand, 24490132 - 24490022
Alignment:
Q  476 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggact 574  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||| |||     ||||| |||||||||||||||||| ||||| |||| || ||||    
T  24490132 tgggctgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgact 24490033  T
Q  575 caccccggtaa 585  Q
    || ||||||||    
T  24490032 caacccggtaa 24490022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 36357916 - 36357870
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36357916 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 36357870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 40002844 - 40002798
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  40002844 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 40002798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 54346978 - 54346932
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  54346978 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 54346932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 37259877 - 37259973
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacggag-gtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    | |||||||| ||||||||||||||||||||||||||| || ||||||    
T  37259877 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtcgtgactca 37259973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 8981777 - 8981823
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  8981777 catcactaagaatggtatttttgttgggaaagggtacgccattgatg 8981823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 13702991 - 13702945
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  13702991 catcactaagaatggtacttttgttgggaaagggtacgccactgatg 13702945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 34644655 - 34644546
Alignment:
Q  479 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa---cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactc 575  Q
    |||||||||||||| || ||||||||||| |||| |||||| |||||   ||||  ||||| ||||||||||||||||||||||||| ||  || |||||    
T  34644655 gctgttttatcctgtaggcggcgcggttgttagtttaccttacacaaactcgga--tagtgtcgcgaaacgtcttaaagaaagcgacatgatcgtgactc 34644558  T
Q  576 accccggtaata 587  Q
    | ||||||||||    
T  34644557 aacccggtaata 34644546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 31269129 - 31269033
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    ||| |||||| |||||||||||||||| |||||||||| || ||||||    
T  31269129 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 31269033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 637 - 692
Target Start/End: Original strand, 12889052 - 12889107
Alignment:
Q  637 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcacca 692  Q
    |||||||||||||| |||||| |||||||||||||||||  |||||||||||||||    
T  12889052 ataggatgagggacaccggaggtgaggtgatgcggaggcctcgcctcgtcgcacca 12889107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 561
Target Start/End: Complemental strand, 17359633 - 17359546
Alignment:
Q  475 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcga 561  Q
    ||||| ||||| |||||||||  ||||| |||| |||||||||||| |||| |   |||||||||| |||||||||||||||||||||    
T  17359633 ctgggttgtttaatcctggaggtggcgcagttgttagtctaccttgaacaaactcgggtagtgccgggaaacgtcttaaagaaagcga 17359546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 586
Target Start/End: Complemental strand, 39319706 - 39319621
Alignment:
Q  502 cggttgctagtctaccttgcacaacggag-gtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaat 586  Q
    |||||| |||||||||||||||||    | |||||| || |||||||||||||||||||||||||  || |||||| |||||||||    
T  39319706 cggttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtcttaaagaaagcgacctgatcgtgactcaacccggtaat 39319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 54990687 - 54990732
Alignment:
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgta 464  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||    
T  54990687 aggtgttattctcgagcaatttctggtagtgcagcctttaatcgta 54990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 566
Target Start/End: Complemental strand, 31765981 - 31765895
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgg 566  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| || |||||||    
T  31765981 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgacctgg 31765895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 525
Target Start/End: Original strand, 10318779 - 10318823
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    |||| |||||| ||| ||||||||||| |||||||||||||||||    
T  10318779 tgttctatcctagaggcggcgcggttgttagtctaccttgcacaa 10318823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 51698012 - 51697968
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  51698012 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 51697968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 494; Significance: 0; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 63 - 629
Target Start/End: Complemental strand, 17510571 - 17510005
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510571 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 17510472  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510471 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 17510372  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17510371 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 17510272  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17510271 agtggtctacgtaccatattagagtggtttttcgaaattttttgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 17510172  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  17510171 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 17510072  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  17510071 ctggtcgtgactcaccccggtaatggtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 17510005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 63 - 622
Target Start/End: Complemental strand, 42020086 - 42019527
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  42020086 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactaatgtaaaatgtg 42019987  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019986 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 42019887  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  42019886 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccattctttctttcctccttctttggtttatcg 42019787  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42019786 agtggtttacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 42019687  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  42019686 tacagttagaatctgggctgttttatcctggagacggcacggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 42019587  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 622  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42019586 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaaatacaaa 42019527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 89 - 629
Target Start/End: Complemental strand, 17505440 - 17504900
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  17505440 cttggaatatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaactattgtaaagtgtgaattgaaaattttatgtcccacatcg 17505341  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17505340 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 17505241  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17505240 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 17505141  T
Q  389 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttat 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  17505140 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagggatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 17505041  T
Q  489 cctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatag 588  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  17505040 cctggagacgacgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactcaccccggtaatag 17504941  T
Q  589 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  17504940 tttcaaagctctgtcataattttcaaattacaaaaacaaca 17504900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 89 - 629
Target Start/End: Complemental strand, 41859071 - 41858541
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  41859071 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaattagtgtaaagtgtgaattgaaaattctatgtcccacatcg 41858972  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41858971 ggtagatcacac--tctagtagaaattctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 41858874  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||| ||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  41858873 ttctcttctctcttc-------cgcggtttgtgttgacgaaccgttctttctttcctcattctttggtttatcgagtggtctacataccatattagagtg 41858781  T
Q  389 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttat 488  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  41858780 gttttttgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 41858681  T
Q  489 cctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatag 588  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||  || |||||| |||||||||||    
T  41858680 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctgatcgtgactca-cccggtaatag 41858582  T
Q  589 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  41858581 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 41858541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 89 - 499
Target Start/End: Complemental strand, 43580147 - 43579737
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43580147 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 43580048  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||| ||    
T  43580047 ggtagatcacatactctagtagaaatcctccttataaattgagagctcgggaatagtatttttcacaccaaaactgagaatcgaatactcttctctgatt 43579948  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43579947 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttattgagtggtctacgtaccatattagagtg 43579848  T
Q  389 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttat 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  43579847 gtttttcgaaacttttcgaaaactatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 43579748  T
Q  489 cctggagacgg 499  Q
    |||||||||||    
T  43579747 cctggagacgg 43579737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 282 - 629
Target Start/End: Complemental strand, 41853842 - 41853496
Alignment:
Q  282 tctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatat 381  Q
    ||||||||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41853842 tctggttttctctgctctcttctccctcccgcggtttgttttaacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatat 41853743  T
Q  382 tagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggct 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | |||||||||    
T  41853742 tagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgtagcctttaatcgtacagttagaatctgggct 41853643  T
Q  482 gttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccg 581  Q
    |||||||| | |||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||||||||||||| || |||||| ||||    
T  41853642 gttttatcgtagagacggcgcggttgctagtctactttgcacaacttaggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactca-cccg 41853544  T
Q  582 gtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41853543 gtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 41853496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 221 - 630
Target Start/End: Complemental strand, 36254177 - 36253772
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttat 320  Q
    ||||||| ||||||| |||||| | ||||||||||||||||| ||||||||||| ||||| ||| |||||||| ||| |||  ||  |||| | |||| |    
T  36254177 tataaatagagagcttgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctagttttctc-cctttctcatc--tccctcagtttgt 36254081  T
Q  321 gttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgag 420  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36254080 gttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtttgcgtaccatattagagtggtttttcgaaacttttcgaaa-ccatattgag 36253982  T
Q  421 gtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 520  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36253981 gtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggaggcggcgcggttgctagtctaccttg 36253882  T
Q  521 cacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 620  Q
    ||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36253881 cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 36253782  T
Q  621 aatacaacac 630  Q
    || |||||||    
T  36253781 aaaacaacac 36253772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 42024866 - 42024566
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  42024866 ggaacactagtgtataatgaaaaaaacttgaagtatactagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaaatgtg 42024767  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42024766 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaat 42024667  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||    
T  42024666 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaatcgttctttctttcctccttctttggtttttcg 42024567  T
Q  363 a 363  Q
    |    
T  42024566 a 42024566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 221 - 629
Target Start/End: Original strand, 1413806 - 1414200
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||| ||||||||    |||||     
T  1413806 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctggttttctccccttctcatctccctc----ggtttg 1413901  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||           ||||||||    
T  1413902 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgc-taccatattagagtggtttttcgaaac-----------catattga 1413989  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| | ||||||||| |||||||||||||||||||||||||||||    
T  1413990 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgagttgttttatcttggagacggcgcggttgctagtctacctt 1414089  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaa-ttttcaaatta 618  Q
    |||||||  |||||||||||||||||||||||||||||||||||||  || |||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  1414090 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccagtaatagtttcaaagctttgtcgtaatttttcaaatta 1414189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 221 - 622
Target Start/End: Complemental strand, 26709444 - 26709056
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| | | |||||||||||||||||||||||| |||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  26709444 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 26709349  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||| ||||| ||||||  |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||           ||||||||    
T  26709348 tgttgatgaaccattcttttcttcctccttctttggtttctcgagtggtctg-gtaccatattagagtggtttttcgaaac-----------catattga 26709261  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| | | |||||||||||||||||||||||| | ||||||||||||||||||||    
T  26709260 ggtgttattctcgagcgattactggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagatgacgcggttgctagtctacctt 26709161  T
Q  520 gcaca--acggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatt 617  Q
    |||||  |   |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26709160 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaatt 26709061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 221 - 622
Target Start/End: Complemental strand, 26979178 - 26978790
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| | | |||||||||||||||||||||||| |||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  26979178 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 26979083  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||| ||||| ||||||  |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||           ||||||||    
T  26979082 tgttgatgaaccattcttttcttcctccttctttggtttctcgagtggtctg-gtaccatattagagtggtttttcgaaac-----------catattga 26978995  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| | | |||||||||||||||||||||||| | ||||||||||||||||||||    
T  26978994 ggtgttattctcgagcgattactggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagatgacgcggttgctagtctacctt 26978895  T
Q  520 gcaca--acggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatt 617  Q
    |||||  |   |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26978894 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaatt 26978795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 221 - 611
Target Start/End: Original strand, 24776563 - 24776945
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||| ||| | |||||||| |||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24776563 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 24776658  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 418  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  24776659 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 24776747  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgc---ggttgctagtc 513  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||   | ||||||||||||||||||||||||||||||   |||||||||||    
T  24776748 aggtgttattctcgagcgatttctggcagtgaatcctttaatcgtacagttttagaatctgggctgttttatcctggagacggcgccgcggttgctagtc 24776847  T
Q  514 taccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||| || |||||||||| |||||| |||| ||||||||||||||||||    
T  24776848 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaatattttcgaagctctgtcgtaatttt 24776945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 221 - 611
Target Start/End: Original strand, 24771108 - 24771487
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||| ||| | |||||||| ||||||||||  |||||| || |||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24771108 tataaatagagagctcaggattggtattctttactccaaaaccaagaatcaaacactcttctctggttttctccccttctcatctccctc----ggtttg 24771203  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| | ||| | |||| |||| |||||||||||||||||  |         || ||||    
T  24771204 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcgatctgcataccgtatttgagtggtttttcgaaaccgt---------at-ttga 24771293  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgcggttgctagtctacc 517  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||   | ||||||| ||||||||||||||||||||||||||| |||||||||    
T  24771294 ggtgttattctcgagcgatttctagcagtgtagcctttaatcgtacagttttagaatctgggttgttttatcctggagacggcgcggttgttagtctacc 24771393  T
Q  518 ttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    |||||||||  ||||||||||||||||| |||||||||||||||||||| || |||||| |||||||||| |||| ||||||||||||||||||    
T  24771394 ttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactcatcccggtaatattttcgaagctctgtcgtaatttt 24771487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 41853956 - 41853846
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41853956 cttggagtatactagggagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattctatgtcccacatcg 41853857  T
Q  189 ggtagatcaca 199  Q
    |||||||||||    
T  41853856 ggtagatcaca 41853846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 1413100 - 1413220
Alignment:
Q  90 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 189  Q
    |||||||||||||||   | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |     
T  1413100 ttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattga 1413199  T
Q  190 gtagatcacacactctagtag 210  Q
    |||||||||||||||||||||    
T  1413200 gtagatcacacactctagtag 1413220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 36254638 - 36254517
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||   | ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |    
T  36254638 cttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgttccacattg 36254539  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  36254538 ggtagatcacacactctagtag 36254517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 24770605 - 24770752
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  24770605 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 24770704  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  24770705 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 24770752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 26709804 - 26709688
Alignment:
Q  94 agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtag 193  Q
    |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  26709804 agtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtag 26709705  T
Q  194 atcacacactctagtag 210  Q
    || ||||| | ||||||    
T  26709704 attacacattgtagtag 26709688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 26979538 - 26979422
Alignment:
Q  94 agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtag 193  Q
    |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  26979538 agtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtag 26979439  T
Q  194 atcacacactctagtag 210  Q
    || ||||| | ||||||    
T  26979438 attacacattgtagtag 26979422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 24776116 - 24776206
Alignment:
Q  120 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24776116 ttggaatgtaaacacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 24776206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 473 - 584
Target Start/End: Original strand, 13582682 - 13582793
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||||||||||||||| |||||||||| || ||    
T  13582682 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 13582781  T
Q  573 ctcaccccggta 584  Q
    |||| |||||||    
T  13582782 ctcatcccggta 13582793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 473 - 584
Target Start/End: Complemental strand, 14374238 - 14374127
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||   |||||||||||||||||||||||||| |||||||||| || ||    
T  14374238 atctgggctgttttatcctggagacggcgtggttgttagtctaccctgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 14374139  T
Q  573 ctcaccccggta 584  Q
    |||| |||||||    
T  14374138 ctcaacccggta 14374127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 473 - 584
Target Start/End: Original strand, 24435861 - 24435972
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||   | |||||||||||||||||||||||| |||||||||| || ||    
T  24435861 atctgggctgttttatcctggagacggcgtggttgatagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 24435960  T
Q  573 ctcaccccggta 584  Q
    |||| |||||||    
T  24435961 ctcatcccggta 24435972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 473 - 581
Target Start/End: Complemental strand, 7805174 - 7805066
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| || ||||||| || ||    
T  7805174 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagggacctggtcgtga 7805075  T
Q  573 ctcaccccg 581  Q
    |||| ||||    
T  7805074 ctcaacccg 7805066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 481 - 587
Target Start/End: Complemental strand, 28857958 - 28857850
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtctt-aaagaaagcgacctgggcgggactcacc 578  Q
    |||||||||||| || ||||| ||||| | ||||||||||||||| |  |||||||||||||||||||||| |||||||||||| ||| || |||||| |    
T  28857958 tgttttatcctgtaggcggcgtggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 28857859  T
Q  579 ccggtaata 587  Q
    |||||||||    
T  28857858 ccggtaata 28857850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 17508676 - 17508630
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17508676 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 17508630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 41857195 - 41857149
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41857195 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 41857149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 42023588 - 42023542
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42023588 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 42023542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 629 - 692
Target Start/End: Complemental strand, 36607173 - 36607110
Alignment:
Q  629 actactgaataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcacca 692  Q
    ||||| |||||||||||||||||||| || ||||||||||||||||| || |||||||||||||    
T  36607173 actaccgaataggatgagggacgccgaaggtgaggtgatgcggaggccgcacctcgtcgcacca 36607110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 24772849 - 24772895
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  24772849 catcactaagaatggtatttttgttgggaaaaggtacgccactgatg 24772895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 37248795 - 37248891
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    |||||||||| ||||| |||||||||| |||||||||| || ||||||    
T  37248795 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 37248891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 26667367 - 26667271
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| |||||||||| || ||||||    
T  26667367 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 26667271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 26938964 - 26938868
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| |||||||||| || ||||||    
T  26938964 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 26938868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 29167973 - 29168069
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| |||||||||| || ||||||    
T  29167973 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 29168069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 36423732 - 36423636
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggt-agtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    |||||||| |||||| ||||| ||||| |||||| ||||||||||    ||  ||||||||||||||||||||||| |||||||||| || ||||||    
T  36423732 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtcgcgactca 36423636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 566
Target Start/End: Complemental strand, 12103120 - 12103034
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgg 566  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| ||||||||||    
T  12103120 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctgg 12103034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 594
Target Start/End: Complemental strand, 31986822 - 31986708
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccc 579  Q
    |||||||||||| || ||||||  ||| || ||||||||||| || |   ||||||| |||||||||||||||||||||||||||   || |||||| ||    
T  31986822 tgttttatcctgaaggcggcgcaattgttaatctaccttgcataaactcgggtagtgtcgcgaaacgtcttaaagaaagcgaccttatcgtgactcaacc 31986723  T
Q  580 cggtaatagtttcaa 594  Q
    || ||||| ||||||    
T  31986722 cgataatattttcaa 31986708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 556790 - 556694
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| | |||||||||||||| |||||||||| || ||||||    
T  556790 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 556694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 561562 - 561466
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| | |||||||||||||| |||||||||| || ||||||    
T  561562 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 36428804 - 36428708
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || ||| |||| |||||||||||||| |||||||||| || ||||||    
T  36428804 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtcttaaagagagcgacctggtcgtgactca 36428708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 36937511 - 36937607
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || ||||||  ||||||||||||||| |||||||||| || ||||||    
T  36937511 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 36937607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 36942265 - 36942361
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || ||||||  ||||||||||||||| |||||||||| || ||||||    
T  36942265 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 36942361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 35679875 - 35679960
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctg 565  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     |  |||||| |||||||||||||||| |||||||||    
T  35679875 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagagcgacctg 35679960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 525
Target Start/End: Original strand, 10759820 - 10759864
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  10759820 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 10759864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 489; Significance: 0; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 89 - 629
Target Start/End: Complemental strand, 4050 - 3510
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4050 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 3951  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3950 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 3851  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3850 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttttttctttcctccttctttggtttatcgagtggtctatgtaccatattagagtg 3751  T
Q  389 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  3750 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 3651  T
Q  489 cctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatag 588  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  3650 cctggaaacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 3551  T
Q  589 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  3550 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 3510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 2166 - 2120
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2166 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 2120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 487; Significance: 0; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 89 - 631
Target Start/End: Original strand, 37409145 - 37409687
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409145 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 37409244  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37409245 ggtagatcacacactctagtataaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 37409344  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37409345 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttttttctttcctccttctttggtttatcgagtggtctatgtaccatattagagtg 37409444  T
Q  389 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  37409445 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 37409544  T
Q  489 cctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatag 588  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  37409545 cctggaaacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 37409644  T
Q  589 tttcaaagctctgtcgtaattttcaaattacaaatacaacact 631  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  37409645 tttcaaagctctgtcgtaattttcaaattacaaaaacaacact 37409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 89 - 629
Target Start/End: Original strand, 37404026 - 37404564
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404026 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 37404125  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37404126 ggtagatcacacactctagtagaaatcctccttataaattgagagcccgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 37404225  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404226 ttctctcctctcttctccctcccg--gtttgtgttgacgaaccgttatttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 37404323  T
Q  389 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  37404324 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 37404423  T
Q  489 cctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatag 588  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  37404424 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 37404523  T
Q  589 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  37404524 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 37404564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 89 - 629
Target Start/End: Complemental strand, 27716930 - 27716390
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27716930 cttggagtatactagtgagtttgtggagcctttggaacgtaagcacaaggatggagaaactagtgtaaagtgtgaattgaaatttttatgtcccacatcg 27716831  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27716830 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgataatcgaatactcttatctggtt 27716731  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27716730 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 27716631  T
Q  389 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttat 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||||||||    
T  27716630 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagtctttaatcgtacagttagaatctgggctgttttat 27716531  T
Q  489 cctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatag 588  Q
    |||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  27716530 cctggagacgacgctgttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 27716431  T
Q  589 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  27716430 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 27716390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 63 - 561
Target Start/End: Complemental strand, 27711836 - 27711319
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711836 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 27711737  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711736 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 27711637  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27711636 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 27711537  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27711536 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 27711437  T
Q  463 tacagttggcatctgggctgttttatcctggaga-------------------cggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaa 543  Q
    ||||||| | ||||||||||||||||||||||||                   ||||||||||||||||||||||||||||||  |||||||||||||||    
T  27711436 tacagttagaatctgggctgttttatcctggagatggcgcggttgctaggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaa 27711337  T
Q  544 acgtcttaaagaaagcga 561  Q
    ||||||||||||||||||    
T  27711336 acgtcttaaagaaagcga 27711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 89 - 596
Target Start/End: Original strand, 11250731 - 11251228
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11250731 cttggagtataccagtgagtttgtggagtctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 11250830  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  11250831 gttagatcacacactctagtagaaatcctccttataaattgagagctcgtgaatagtattctttactccaaaattgagaatcgaatactcttctctggtt 11250930  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11250931 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtatcatattagagtg 11251030  T
Q  389 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttat 488  Q
    ||          ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||| | ||||||||||||||||    
T  11251031 gt----------ttttcgaaaaccatattgaggtgttattctcgagcgattactggcagtgcagtctttaatcgtacagttagaatctgggctgttttat 11251120  T
Q  489 cctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatag 588  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  11251121 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 11251220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 221 - 616
Target Start/End: Complemental strand, 5730446 - 5730065
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  5730446 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 5730351  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||           ||||||||    
T  5730350 tgttgacgaaccgttcttttattcctccttctttggtttctcgagtggtctgtgtaccatattagagtggtttttcgaaac-----------catattga 5730262  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||| | | ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  5730261 ggtgttattctcgagcgatttttggcagtgtagcctttaatcgtacagatagaatctgtgctgttttatcctggagacggtgcggttgctagtctacctt 5730162  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 616  Q
    ||||||   ||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||    
T  5730161 gcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttaaaat 5730065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 221 - 611
Target Start/End: Complemental strand, 3584942 - 3584566
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||| ||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  3584942 tataaatagagagctcaggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 3584847  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  3584846 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 3584758  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    ||||||||| ||||||||||| ||| |||||| |||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  3584757 ggtgttattgtcgagcgatttatggtagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 3584658  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    ||||||   ||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  3584657 gcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 3584566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 336 - 629
Target Start/End: Original strand, 11387666 - 11387978
Alignment:
Q  336 tttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagc 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11387666 tttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagc 11387765  T
Q  436 gatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcct-------------------ggagacggcgcggttgctagtctac 516  Q
    |||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||                   |||||||||||||||||||||||||    
T  11387766 gatttctgccagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagatggcgcggttgctaggagacggcgcggttgctagtctac 11387865  T
Q  517 cttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 616  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||||||| || ||||||||||| |||||||||||||||||||| |||||||||||||    
T  11387866 cttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcaccccgataatagtttcaaagctctgttgtaattttcaaat 11387965  T
Q  617 tacaaatacaaca 629  Q
    |||||| ||||||    
T  11387966 tacaaaaacaaca 11387978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 89 - 292
Target Start/End: Original strand, 34317840 - 34318043
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317840 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 34317939  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34317940 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 34318039  T
Q  289 ttct 292  Q
    ||||    
T  34318040 ttct 34318043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 89 - 338
Target Start/End: Original strand, 36684270 - 36684516
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684270 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36684369  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36684370 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttgactccaaaactgagaatcgaatactcttctctggtt 36684469  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  36684470 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 36684516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 211 - 629
Target Start/End: Original strand, 48246427 - 48246823
Alignment:
Q  211 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 309  Q
    ||||||||  ||||||| |||| ||||| ||| | |||||||||| |||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    
T  48246427 aaatcctctctataaatagagacctcggaaatgggattcttcactacaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 48246526  T
Q  310 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 409  Q
        ||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||             
T  48246527 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttaccgagtggtctacgtaccatataagagtggttttttgaaac--------- 48246613  T
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
      ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||   | |||||||||||||||||||||||||||||||||||||    
T  48246614 --catattgaggtgttattctcgagcgatttctggcaatgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgct 48246711  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatt 609  Q
    |||||||||||||||||  ||||||||||||||||||||||||||       |   | || |||||||||||||||||||||||||||||| |||||| |    
T  48246712 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag-------ctctgtcgtgactcaccccggtaatagtttcaaagctctatcgtaa-t 48246803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 323 - 616
Target Start/End: Complemental strand, 5725221 - 5724939
Alignment:
Q  323 tgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggt 422  Q
    ||||||||| ||||||  ||||| |||||||||||| |||||||| || |||||||||||||||||||||||||||||           |||||||||||    
T  5725221 tgacgaaccattcttttcttccttcttctttggtttctcgagtggcctgcgtaccatattagagtggtttttcgaaac-----------catattgaggt 5725133  T
Q  423 gttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgca 522  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5725132 gttattctcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgtgctgttttatcctggagacggcgcggttgctagtctaccttgca 5725033  T
Q  523 caacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 616  Q
    |||   |||||||||||||||||||||||||||||||||||||| || |||||||| || ||||| ||||||||||||||||||||||| ||||    
T  5725032 caatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacctcgataataatttcaaagctctgtcgtaattttaaaat 5724939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 410 - 622
Target Start/End: Original strand, 36684644 - 36684858
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  36684644 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 36684743  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| ||||||   ||||| |    
T  36684744 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 36684843  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  36684844 ttttcaaattacaaa 36684858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 417 - 628
Target Start/End: Original strand, 34318160 - 34318373
Alignment:
Q  417 tgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctac 516  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||||||  | || |||||||||||||||||||||||||||||||||||||||||    
T  34318160 tgaggtgtcattttcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatttgggctgttttatcctggagacggcgcggttgctagtctac 34318259  T
Q  517 cttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-attttcaa 614  Q
    |||||||||   ||||||||||||||||||||||||||| |||||| ||| || |||||| ||||||||||||||| |||||||  ||||| ||||||||    
T  34318260 cttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttggtcgtgactcatcccggtaatagtttcaaaagctccatcgtatattttcaa 34318359  T
Q  615 attacaaatacaac 628  Q
    |||||||| |||||    
T  34318360 attacaaaaacaac 34318373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 5725512 - 5725365
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725512 ggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 5725413  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  5725412 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 5725365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 3585448 - 3585301
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3585448 ggaacactagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaaatgtg 3585349  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  3585348 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 3585301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 5730917 - 5730771
Alignment:
Q  64 gaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtga 163  Q
    ||||||||||||||||||        |||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  5730917 gaacactagtgtataatggaaaaaatttggagtatactagttggtttgtgaaacctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtga 5730818  T
Q  164 attgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  5730817 attgaaaattttatgtcccacattgggtagatcacacactctagtag 5730771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 48245998 - 48246119
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||   | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| |    
T  48245998 cttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattaaaatttttatgtcccacattg 48246097  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  48246098 ggtagatcacacactctagtag 48246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 473 - 584
Target Start/End: Complemental strand, 10106206 - 10106095
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||| || ||    
T  10106206 atctgggttgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 10106107  T
Q  573 ctcaccccggta 584  Q
    |||| |||||||    
T  10106106 ctcaacccggta 10106095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 38734378 - 38734265
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||| || ||    
T  38734378 atctggactgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 38734279  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||| ||||    
T  38734278 ctcaacccgataat 38734265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 586
Target Start/End: Original strand, 39747157 - 39747270
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||   |||||||||||||||||||||||||| ||| |||||| || ||    
T  39747157 atctgggctgttttatcctggagacgacgtggttgctagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctggtcgtga 39747256  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||| ||||    
T  39747257 ctcaacccgataat 39747270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 473 - 584
Target Start/End: Complemental strand, 13890916 - 13890805
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||||||||   ||||||||||| |||||||||||||| |||||||||| || ||    
T  13890916 atctgggctgttttatcctggagacggtgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtga 13890817  T
Q  573 ctcaccccggta 584  Q
    |||| |||||||    
T  13890816 ctcaacccggta 13890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 586
Target Start/End: Original strand, 5602417 - 5602530
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    |||||| |||||||||| ||||||||||| ||||| ||||||||||||||||||   |||||||| ||||||||||||||||| ||||| |||| || ||    
T  5602417 atctggactgttttatcttggagacggcgtggttgttagtctaccttgcacaactagggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtga 5602516  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  5602517 ctcaacccggtaat 5602530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 475 - 586
Target Start/End: Original strand, 26651160 - 26651271
Alignment:
Q  475 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggact 574  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||   ||||||||||| |||| ||||||||| || ||||||| || ||||    
T  26651160 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacatcttaaagagagtgacctggtcgtgact 26651259  T
Q  575 caccccggtaat 586  Q
    || |||| ||||    
T  26651260 caacccgataat 26651271  T

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Target: chr1; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 473 - 565
Target Start/End: Complemental strand, 14582202 - 14582110
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctg 565  Q
    |||||| |||||||||||||||||||| | ||||| ||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||    
T  14582202 atctggactgttttatcctggagacggtgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacttcttaaagagagcgacctg 14582110  T

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Target: chr1; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 50959010 - 50959069
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaac 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50959010 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaagaatggagaaac 50959069  T

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Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 27715046 - 27715000
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27715046 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 27715000  T

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Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 37405908 - 37405954
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  37405908 catcactaagaatgataattttgttgggaaagggtacgccactgatg 37405954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 25188272 - 25188357
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacggaggtagtgccgcgaaacgtcttaaagaaagcgacctg 565  Q
    ||||||||| |||||||| | |||||| ||||||||||||||| |||  | ||||||||||||||| |||| |||||||| |||||    
T  25188272 tgttttatcttggagacgacacggttgttagtctaccttgcacaaactcaagtagtgccgcgaaacttcttcaagaaagcaacctg 25188357  T

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Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 588 - 629
Target Start/End: Complemental strand, 27711315 - 27711274
Alignment:
Q  588 gtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  27711315 gtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 27711274  T

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Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 10135551 - 10135455
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacgg-aggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||| ||| ||||| ||||| | |||| ||||||||||    |||||||||| |||||||||||||||| |||||||||| || ||||||    
T  10135551 tgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 10135455  T

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Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 586
Target Start/End: Original strand, 19422866 - 19422983
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctac----cttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggc 568  Q
    ||||||||| |||||||||||||| ||||  |||| ||||||||    ||||||||||   |||||||| ||||||||||||||||| ||||| |||  |    
T  19422866 atctgggctattttatcctggagatggcgtagttgttagtctacctaccttgcacaacttgggtagtgcagcgaaacgtcttaaagagagcgatctgatc 19422965  T
Q  569 gggactcaccccggtaat 586  Q
    | |||||| ||| |||||    
T  19422966 gtgactcaacccagtaat 19422983  T

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Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 5728721 - 5728674
Alignment:
Q  13 catcactaagaatggtattttt-gttgggaaagggtacgccactgatg 59  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  5728721 catcactaagaatgatattttttgttgggaaagggtacgccactgatg 5728674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 562
Target Start/End: Complemental strand, 33055139 - 33055052
Alignment:
Q  475 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||||||||||||||||| | || |||||| ||||||||||||||| |||   |||||||||| ||   |||||||||||||||||    
T  33055139 ctgggctgttttatcctggaggc-gcacggttgatagtctaccttgcacaaactcgggtagtgccgtgattagtcttaaagaaagcgac 33055052  T

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Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 51041463 - 51041557
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||| ||||| ||||| ||||| |||||| ||||||||||    || |||||| |||||||||||||| | |||||||||| || ||||||    
T  51041463 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaatttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 51041557  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 8267891 - 8267931
Alignment:
Q  541 gaaacgtcttaaagaaagcgacctgggcgggactcaccccg 581  Q
    |||||||||||||||||||||||||| || |||||| ||||    
T  8267891 gaaacgtcttaaagaaagcgacctggtcgtgactcaacccg 8267931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 486; Significance: 0; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 96 - 629
Target Start/End: Complemental strand, 17369199 - 17368666
Alignment:
Q  96 tatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagat 195  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17369199 tatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagat 17369100  T
Q  196 cacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17369099 cacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggttttctctc 17369000  T
Q  296 ctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttc 395  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368999 ctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttc 17368900  T
Q  396 gaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggag 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  17368899 gaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggag 17368800  T
Q  496 acggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaa 595  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  17368799 acggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaa 17368700  T
Q  596 gctctgtcgtaattttcaaattacaaatacaaca 629  Q
    ||||||||||||||||||||||||||| ||||||    
T  17368699 gctctgtcgtaattttcaaattacaaaaacaaca 17368666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 89 - 622
Target Start/End: Complemental strand, 55129276 - 55128743
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55129276 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaag-atggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 55129178  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55129177 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 55129078  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55129077 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacataccatattagagtg 55128978  T
Q  389 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttat 488  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  55128977 gtttttcgaaacttttcgaaaaccatgttgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttgaaatctgggctgttttat 55128878  T
Q  489 cctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatag 588  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||| || |||||| |||| |||| |    
T  55128877 cctggagacggcgcggttgctagtctaccttacacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca-cccgataattg 55128779  T
Q  589 tttcaaa--gctctgtcgtaattttcaaattacaaa 622  Q
    |||||||  |||||||||||||||||||||||||||    
T  55128778 tttcaaaaggctctgtcgtaattttcaaattacaaa 55128743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 221 - 611
Target Start/End: Complemental strand, 54270986 - 54270609
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  54270986 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 54270891  T
Q  320 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 418  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |  |||||||||||||||||||||           ||||||||||||    
T  54270890 tgttgacgaaccgttcttttcttccctccttctttggtttctcgagtggtctgcaaaccatattagagtggtttttc-----------aaaaccatattg 54270802  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 518  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||  |||||||||||||||||||||||||||||||||||||||    
T  54270801 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtttgaatctgaactgttttatcctggagacggcgcggttgctagtctacct 54270702  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  54270701 tgcacaacttaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 54270609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 221 - 611
Target Start/End: Original strand, 34128923 - 34129299
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| ||||| |||||| | | ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  34128923 tataaatagagaggtcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 34129018  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  34129019 tgttgacgaaccgttcttttcttcatccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattga 34129107  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  34129108 ggtgttattctcgagcgatttctggtggtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 34129207  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    ||||||   |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||    
T  34129208 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcagcccggtaatagtttcaaagctctgtcgtaatttt 34129299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 221 - 611
Target Start/End: Original strand, 4117345 - 4117730
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  4117345 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 4117440  T
Q  320 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 418  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||  ||||||||| ||||| ||    
T  4117441 tgttgacgaaccgttcttttcttccctccttctttggtttctcgagtggtctatgaaccatattacagtggtttttcgaa--ttttcgaaa-ccatactg 4117537  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 518  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  4117538 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacagcgcggttgctagtctacct 4117637  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    ||||||||  |||||||||||||||| ||||||| ||||||||||||| || |||||||||| |||||| |||| |||||| |||||||||||    
T  4117638 tgcacaacttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtcgtgactcaccccagtaatattttcgaagctccgtcgtaatttt 4117730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 221 - 616
Target Start/End: Original strand, 3482166 - 3482560
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||| ||||||||    |||||     
T  3482166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctggttttctccccttctcatctccctc----ggtttg 3482261  T
Q  320 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 418  Q
    |||||||||||||||||||  |||||||| | ||||| || || |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  3482262 tgttgacgaaccgttcttttcttcctcctctatttggattctcaagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactg 3482360  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 518  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  3482361 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 3482460  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 616  Q
    |||||||   ||||| |||||||||| ||||||||||||||||||||| || ||||||| ||| |||| |||||  ||| ||||||||||||||| ||||    
T  3482461 tgcacaaattaggtaatgccgcgaaaagtcttaaagaaagcgacctggtcgtgactcactccgataattgtttcaaaaaactctgtcgtaatttttaaat 3482560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 221 - 611
Target Start/End: Complemental strand, 17358179 - 17357801
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| | | ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  17358179 tataaatagagagctcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 17358084  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  17358083 tgttgacgaaccgttcttttcttcttccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattga 17357995  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  17357994 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 17357895  T
Q  520 gcaca--acggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    |||||  |   ||||||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||||||||||| ||||||||||||    
T  17357894 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgtgactcacctcggtaatagtttcaaagctttgtcgtaatttt 17357801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 221 - 616
Target Start/End: Original strand, 3476699 - 3477083
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||   |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  3476699 tataaatagagagctcgggaatgggattcttcactccaaaaacaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 3476794  T
Q  320 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 418  Q
    |||||||||||| ||||||  |||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||           |||| ||    
T  3476795 tgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaac-----------catactg 3476883  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 518  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  3476884 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 3476983  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 616  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  3476984 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattgtttcaaaaagctctgtcgtaatttttaaat 3477083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 221 - 622
Target Start/End: Complemental strand, 10321784 - 10321396
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| | | ||||||||||||||||| |||||| |||| ||||| || ||||||||| ||| ||| ||||||||    |||||     
T  10321784 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaattgaatcctcttctcaggttttctccccttctcatctccctc----ggtttg 10321689  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  10321688 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 10321600  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgtttt-atcctggagacggcgcggttgctagtctacct 518  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||| || ||||||||  |||||||||||||||||||    
T  10321599 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagatggaatctgggctgtttttattctggagacaacgcggttgctagtctacct 10321500  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatta 618  Q
    |||||||   | |||||||||||||||||||||||||||||||||||| || |||| | || ||||||| |||||||||||||||||||||||||||||     
T  10321499 tgcacaatttaagtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactgatcctggtaataatttcaaagctctgtcgtaattttcaaattc 10321400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 63 - 338
Target Start/End: Original strand, 20090191 - 20090463
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  20090191 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaagtgtg 20090290  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20090291 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 20090390  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  20090391 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 20090463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 63 - 338
Target Start/End: Original strand, 20095316 - 20095588
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  20095316 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaagtgtg 20095415  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20095416 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 20095515  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  20095516 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 20095588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 89 - 338
Target Start/End: Original strand, 15762585 - 15762831
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15762585 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 15762684  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15762685 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 15762784  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  15762785 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 15762831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 89 - 338
Target Start/End: Original strand, 15767746 - 15767992
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15767746 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 15767845  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15767846 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 15767945  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  15767946 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 15767992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 410 - 629
Target Start/End: Original strand, 30341773 - 30341993
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||||||||| || |||||||||    
T  30341773 accatattgaggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagatggtgcggttgct 30341872  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatt 609  Q
    |||||||||| |||||   |||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||| |||||||||||||||||||||    
T  30341873 agtctaccttacacaatttaggtagtgccgcgaaacgtcttaaagaaagtgacctggtcgtgactcaccccgataatactttcaaagctctgtcgtaatt 30341972  T
Q  610 tt-caaattacaaatacaaca 629  Q
    || |||||| |||| ||||||    
T  30341973 ttccaaattccaaaaacaaca 30341993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 410 - 618
Target Start/End: Original strand, 20090591 - 20090801
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  20090591 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 20090690  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  20090691 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 20090790  T
Q  608 ttttcaaatta 618  Q
    |||||||||||    
T  20090791 ttttcaaatta 20090801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 410 - 618
Target Start/End: Original strand, 20095716 - 20095926
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  20095716 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 20095815  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  20095816 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 20095915  T
Q  608 ttttcaaatta 618  Q
    |||||||||||    
T  20095916 ttttcaaatta 20095926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 410 - 622
Target Start/End: Original strand, 15762959 - 15763173
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  15762959 accatatcgaggtgtaattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 15763058  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    |||||||||||||||    ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| ||||||   ||||| |    
T  15763059 agtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 15763158  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  15763159 ttttcaaattacaaa 15763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 410 - 622
Target Start/End: Original strand, 15768120 - 15768334
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  15768120 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 15768219  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    |||||||||||||||    ||||||||||||||||||||||||||| |||||||||| || |||||| ||| ||||||||||| ||||||   ||||| |    
T  15768220 agtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccagtaatagtttcaaaagcttcatcgtata 15768319  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  15768320 ttttcaaattacaaa 15768334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 3481649 - 3481796
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3481649 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 3481748  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  3481749 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 3481796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 473 - 611
Target Start/End: Complemental strand, 17364168 - 17364028
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--acggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgg 570  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |   |||||||||||||||||||||||||||||||||||||| ||     
T  17364168 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 17364069  T
Q  571 gactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17364068 gactcaccccggtaatagtttcaaagctctgtcgtaatttt 17364028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 34128437 - 34128558
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34128437 cttggagtatactagttgatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 34128536  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  34128537 ggtagatcacacactctagtag 34128558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 17358686 - 17358566
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  17358686 cttggattatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaa-tagtgtaaagtgtgaattgaaaattttatgtcccacattg 17358588  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  17358587 ggtagatcacacactctagtag 17358566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 30338126 - 30338247
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  30338126 cttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacattg 30338225  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  30338226 ggtagatcacacactctagtag 30338247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 30341204 - 30341351
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30341204 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 30341303  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||    
T  30341304 aattgaaaattttatggcccacattaggtagatcacacactctagtag 30341351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 54271433 - 54271312
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||| |||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  54271433 cttgaagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtctaaagtgtgaattgaaaattttatgtcccacattg 54271334  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  54271333 ggtagatcacacactctagtag 54271312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 3476249 - 3476339
Alignment:
Q  120 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3476249 ttggaatgtaaacacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 3476339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 4117007 - 4117097
Alignment:
Q  120 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4117007 ttggaatgtaaacacaatgatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 4117097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 586
Target Start/End: Original strand, 33089335 - 33089448
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||| ||||||||||||| ||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||| || ||    
T  33089335 atctgagctgttttatcctagagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 33089434  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  33089435 ctcaacccggtaat 33089448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 13022130 - 13022017
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||   |||||||||||||||||| ||||| | |||||||||| || ||    
T  13022130 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtga 13022031  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||| ||||    
T  13022030 ctcaacccgataat 13022017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 20810475 - 20810362
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||   |||||||| ||||||||||||||||| | |||||||| || ||    
T  20810475 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtga 20810376  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||| ||||    
T  20810375 ctcaacccgataat 20810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 586
Target Start/End: Original strand, 38436983 - 38437096
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||   | ||||||| ||||||||||||||||||| ||||||  || ||    
T  38436983 atctgggctgttttatcctggagacggcgtggttgttagtctacctttcacaacttggatagtgccacgaaacgtcttaaagaaagtgacctgatcgtga 38437082  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  38437083 ctcaacccggtaat 38437096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 53119630 - 53119517
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    |||||| |||||||||||| ||||||||| ||||| ||||||||||||||||||    ||||||||||||||||||||||||| |||||||||  || ||    
T  53119630 atctggcctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgagtagtgccgcgaaacgtcttaaagagagcgacctgatcgtga 53119531  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  53119530 ctcaacccggtaat 53119517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 26962162 - 26962049
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||    |||||||| |||||||||||||||| ||||| |||| || ||    
T  26962162 atctgtgctgttttatcctggagacggcgtgtttgttagtctaccttgcacaacttgtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtga 26962063  T
Q  573 ctcaccccggtaat 586  Q
    |||| ||| |||||    
T  26962062 ctcaacccagtaat 26962049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 480 - 587
Target Start/End: Original strand, 2617255 - 2617363
Alignment:
Q  480 ctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcacc 578  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| |||    |||||||||||||||||||||||||||||||| |||  | |||||| |    
T  2617255 ctgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggttgtgactcaac 2617354  T
Q  579 ccggtaata 587  Q
    || ||||||    
T  2617355 cctgtaata 2617363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 3478439 - 3478485
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3478439 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 3478485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 15764511 - 15764557
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15764511 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 15764557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 17362680 - 17362634
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17362680 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 17362634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 17367322 - 17367276
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17367322 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 17367276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 20092142 - 20092188
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20092142 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 20092188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 30338506 - 30338595
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcc-tctcttctccctc 309  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| || |||| ||||||||    
T  30338506 tataaatagagagctcgggatttggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 30338595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 525
Target Start/End: Original strand, 21494300 - 21494346
Alignment:
Q  479 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||    
T  21494300 gctgttttatcccggagacggcgcggttgttagtctaccttgcacaa 21494346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 758368 - 758464
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     ||||||||| |||||||||||||||| ||||| |||| || ||||||    
T  758368 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 758464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 23666123 - 23666219
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| |||||||||| || ||||||    
T  23666123 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 23666219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 24038371 - 24038467
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| |||||||||| || ||||||    
T  24038371 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 24038467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 39775728 - 39775824
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| |||||||||| || ||||||    
T  39775728 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 39775824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 522
Target Start/End: Original strand, 795399 - 795446
Alignment:
Q  475 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgca 522  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  795399 ctgggctgttttatcctggaggcggcacggttgttagtctaccttgca 795446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 497 - 566
Target Start/End: Original strand, 1688902 - 1688972
Alignment:
Q  497 cggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgg 566  Q
    ||||||| ||| || |||||||||||||| |   ||||||||||| |||||||||||||||||||||||||    
T  1688902 cggcgcgattgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtcttaaagaaagcgacctgg 1688972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 559
Target Start/End: Original strand, 25023929 - 25024003
Alignment:
Q  486 tatcctggagacggcgcggttgctagtctaccttgcac-aacggaggtagtgccgcgaaacgtcttaaagaaagc 559  Q
    |||||||||| |||| |||||| ||||||||||||||| ||| ||||||||| || ||||||||| || ||||||    
T  25023929 tatcctggaggcggcacggttgttagtctaccttgcacaaactgaggtagtgtcgtgaaacgtctcaaggaaagc 25024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 576
Target Start/End: Original strand, 25726843 - 25726889
Alignment:
Q  530 ggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    |||||||||||||||||||||||||| |||||||||| || ||||||    
T  25726843 ggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 25726889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 27605133 - 27605242
Alignment:
Q  479 gctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcac 577  Q
    ||||||||||||| ||| ||| |  |||| ||||||||||||||| |||   |||||||| |||||| |||||||||| |||||| ||| || ||||||     
T  27605133 gctgttttatcctagaggcggtgtagttgttagtctaccttgcacaaactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtcgtgactcaa 27605232  T
Q  578 cccggtaata 587  Q
    || |||||||    
T  27605233 cctggtaata 27605242  T

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Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 3672679 - 3672583
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || ||||||  ||||||||||||||| |||||||||| || ||||||    
T  3672679 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 3692711 - 3692615
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || ||||||  ||||||||||||||| |||||||||| || ||||||    
T  3692711 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3692615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 30341720 - 30341771
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcga 272  Q
    ||||||| |||||||||||| | | ||||||||||||||||| |||||||||    
T  30341720 tataaatagagagctcgggattgggattcttcactccaaaaccgagaatcga 30341771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 483 - 525
Target Start/End: Complemental strand, 26706877 - 26706835
Alignment:
Q  483 ttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||| |||||| |||| |||||||||||||||||    
T  26706877 ttttatcctggaggcggcgcagttgttagtctaccttgcacaa 26706835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 549
Target Start/End: Original strand, 1741109 - 1741178
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacggaggtagtgccgcgaaacgtct 549  Q
    ||||||||||||||| ||||||||||| || | | |||||||| |||  |||||||| ||||||||||||    
T  1741109 tgttttatcctggaggcggcgcggttgttaatttgccttgcacaaactcaggtagtgtcgcgaaacgtct 1741178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 10321861 - 10321816
Alignment:
Q  246 attcttcactccaaaactgagaatcgaatactcttatctggttttc 291  Q
    ||||||||| ||||||| ||||||||||| ||||| ||||||||||    
T  10321861 attcttcaccccaaaaccgagaatcgaatcctcttctctggttttc 10321816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 522
Target Start/End: Complemental strand, 27709029 - 27708988
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgca 522  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||    
T  27709029 tgttttatcctggaggcggcgtggttgatagtctaccttgca 27708988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 18472100 - 18472056
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  18472100 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 18472056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 525
Target Start/End: Original strand, 23661464 - 23661508
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  23661464 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 23661508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 525
Target Start/End: Original strand, 32474680 - 32474724
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||    
T  32474680 tgttttatcctggagacggcgtggttgatagtctgtcttgcacaa 32474724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 450; Significance: 0; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 63 - 629
Target Start/End: Complemental strand, 40392832 - 40392266
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  40392832 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttgcaatgtaaacataaggatggagaaactagtgtaaagtgtg 40392733  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40392732 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 40392633  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 362  Q
    ||||||||||||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40392632 tgagaatcgaatacttttctctgattttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 40392533  T
Q  363 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40392532 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 40392433  T
Q  463 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgac 562  Q
    ||||||| | || |||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |       
T  40392432 tacagttagaatttgggctgttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacagt 40392333  T
Q  563 ctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||| || ||||||||||| |||||||||||||  ||| ||||||||||||||||||||| ||||||    
T  40392332 ctggtcgtgactcaccccgataatagtttcaaaattctatcgtaattttcaaattacaaaaacaaca 40392266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 89 - 629
Target Start/End: Original strand, 40518075 - 40518620
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40518075 cttggagtataatagtgagtttgtggagcctttggaatataaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 40518174  T
Q  189 gg-tagatcacacactctagtagaaatcctccttat----aaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatc 283  Q
    || |||||||||||||||||||||||||||||||||    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  40518175 gggtagatcacacactctagtagaaatcctccttattaataaattgagagctcgtgaatagtattcttcactccaaaactgagaatcgaatactcttctc 40518274  T
Q  284 tggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttcttt-ggtttatcgagtggtctacgtaccatatt 382  Q
    | ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  40518275 ttgttttctctcctctcttctccctccagcggtttgtgttgacgaaccgttctttctt-cctccttcttttggtttatcgagtggtctacgtaccatatt 40518373  T
Q  383 agagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctg 482  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||    
T  40518374 agagtggtttttcgaaactttttgaaaaccatattgaggtgttattctcgagcgatttttggcagtgcagcctttaatcgtacagttagaatctgggctg 40518473  T
Q  483 ttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccgg 582  Q
    ||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  40518474 ttttatcctggagacggcgcggttgctagtctaccttgcactatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccgg 40518573  T
Q  583 taatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 629  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  40518574 taatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 40518620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 221 - 629
Target Start/End: Original strand, 28751483 - 28751877
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  28751483 tataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 28751578  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||           |||||||||||||    
T  28751579 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttc-----------aaaaccatattga 28751667  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  28751668 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggtgcggttgcttgtctacctt 28751767  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 619  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28751768 gcacaacttaggtagtgccgcgaaacgtctaaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaattac 28751867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 89 - 338
Target Start/End: Original strand, 42728175 - 42728421
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42728175 cttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 42728274  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42728275 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 42728374  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  42728375 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 42728421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 90 - 293
Target Start/End: Original strand, 42723007 - 42723210
Alignment:
Q  90 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 189  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42723007 ttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 42723106  T
Q  190 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttt 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42723107 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggttt 42723206  T
Q  290 tctc 293  Q
    ||||    
T  42723207 tctc 42723210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 44096842 - 44096596
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44096842 cttggagtatactagtgagtttgtggagcatttggaatgtaaacaaaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44096743  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  44096742 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 44096643  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  44096642 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 44096596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 89 - 280
Target Start/End: Original strand, 44754161 - 44754352
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44754161 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44754260  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44754261 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 44754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 89 - 280
Target Start/End: Original strand, 44759327 - 44759518
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44759327 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44759426  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44759427 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 44759518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 92 - 280
Target Start/End: Complemental strand, 40520122 - 40519929
Alignment:
Q  92 ggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatc-ggg 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40520122 ggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggg 40520023  T
Q  191 tagatcacacactctagtagaaatcctcctt----ataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 280  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40520022 tagatcacacactctagtagaaatcctccttatgaataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 40519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 410 - 622
Target Start/End: Original strand, 42723380 - 42723594
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  42723380 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 42723479  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  42723480 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 42723579  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  42723580 ttttcaaattacaaa 42723594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 410 - 622
Target Start/End: Original strand, 42728549 - 42728763
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  42728549 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 42728648  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  42728649 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 42728748  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  42728749 ttttcaaattacaaa 42728763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 410 - 630
Target Start/End: Complemental strand, 44096468 - 44096246
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  44096468 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44096369  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  44096368 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 44096269  T
Q  608 ttttcaaattacaaatacaacac 630  Q
    |||| |||||||||| |||||||    
T  44096268 tttttaaattacaaaaacaacac 44096246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 410 - 622
Target Start/End: Original strand, 44754525 - 44754739
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  44754525 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44754624  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| ||||||   ||||| |    
T  44754625 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 44754724  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  44754725 ttttcaaattacaaa 44754739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 410 - 622
Target Start/End: Original strand, 44759691 - 44759905
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  44759691 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44759790  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| ||||||   ||||| |    
T  44759791 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 44759890  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  44759891 ttttcaaattacaaa 44759905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 4162895 - 4163042
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||| ||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4162895 ggaacactggtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 4162994  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4162995 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 4163042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 28751021 - 28751168
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28751021 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 28751120  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  28751121 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 28751168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 221 - 400
Target Start/End: Original strand, 4163331 - 4163507
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  4163331 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 4163426  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaac 400  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  4163427 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac 4163507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 476 - 586
Target Start/End: Complemental strand, 42914742 - 42914632
Alignment:
Q  476 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactc 575  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||||| | |||||||| || |||||    
T  42914742 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtgactc 42914643  T
Q  576 accccggtaat 586  Q
    | |||| ||||    
T  42914642 aacccgctaat 42914632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 478 - 566
Target Start/End: Complemental strand, 5089376 - 5089288
Alignment:
Q  478 ggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgg 566  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||   | |||||||||||||||||||||||| ||||||||||    
T  5089376 ggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctgg 5089288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 42724940 - 42724986
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42724940 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 42724986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 44756092 - 44756138
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44756092 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 44756138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 30658358 - 30658262
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacggag-gtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    | |||||||| |||||||||||||||| |||||||||| || ||||||    
T  30658358 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 30658262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 578 - 617
Target Start/End: Original strand, 4163525 - 4163564
Alignment:
Q  578 cccggtaatagtttcaaagctctgtcgtaattttcaaatt 617  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4163525 cccggtaatagtttcaaagctctgtcgtaattttcaaatt 4163564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 9180724 - 9180820
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacggagg-tagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    ||  |||||| |||||||||||||||| |||||||||| || ||||||    
T  9180724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9180820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 10160724 - 10160820
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| |||||||||| || ||||||    
T  10160724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 10160820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 584
Target Start/End: Complemental strand, 19538458 - 19538377
Alignment:
Q  504 gttgctagtctaccttgcacaa---cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggta 584  Q
    |||| |||||||||||||||||   ||||  |||||||| |||| ||||||||||||||||||||| || |||||| |||||||    
T  19538458 gttgttagtctaccttgcacaaactcgga--tagtgccgtgaaatgtcttaaagaaagcgacctggtcgtgactcaacccggta 19538377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 9189803 - 9189899
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacggagg-tagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    ||  |||||| |||||||||||||||| ||| |||||| || ||||||    
T  9189803 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtcgtgactca 9189899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 692
Target Start/End: Original strand, 36594228 - 36594283
Alignment:
Q  637 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcacca 692  Q
    ||||||||||||||| | ||| ||||||| ||||||||| ||||||| ||||||||    
T  36594228 ataggatgagggacgacagaggtgaggtgttgcggaggccgcgcctcatcgcacca 36594283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 532 - 584
Target Start/End: Complemental strand, 28855048 - 28854996
Alignment:
Q  532 tagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggta 584  Q
    |||||||| ||||||||||||||||||||||| ||  | |||||| |||||||    
T  28855048 tagtgccgtgaaacgtcttaaagaaagcgaccgggttgtgactcaacccggta 28854996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 39543004 - 39542912
Alignment:
Q  475 ctgggctgttttatcctggagacggcgcggttgctagtct-accttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctg 565  Q
    ||||||| ||||||||||||| |   ||||||| |||||| ||||| ||||| |  | ||||||||| ||||||||||||||| |||||||||    
T  39543004 ctgggctattttatcctggaggcaatgcggttgttagtcttaccttacacaaactcatgtagtgccgtgaaacgtcttaaagagagcgacctg 39542912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 42926763 - 42926803
Alignment:
Q  485 ttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||| ||||| ||||| |||||||||||||||||    
T  42926763 ttatcctggaggcggcgtggttgatagtctaccttgcacaa 42926803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 238; Significance: 1e-131; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 221 - 616
Target Start/End: Original strand, 2234384 - 2234765
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  2234384 tataaatagagagctcgggattagtattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 2234479  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  2234480 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 2234568  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  2234569 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 2234668  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 616  Q
    ||||||   ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||| ||||    
T  2234669 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcaacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttaaaat 2234765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 221 - 629
Target Start/End: Original strand, 16539166 - 16539559
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||  ||| ||||| |||||||||||| | | ||| ||||||||    |||||     
T  16539166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctggttttctcccattctcatctccctc----ggtttg 16539261  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    ||||||||||| |||||||  |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||           |||| |||    
T  16539262 tgttgacgaacagttcttttcttcctccttctttggtttctcgagtggtctacgtgtcatattagagtggtttttcgaaac-----------catactga 16539350  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  16539351 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 16539450  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 619  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16539451 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaa-cttcaaattac 16539549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 221 - 629
Target Start/End: Complemental strand, 16626496 - 16626103
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||  ||| ||||| |||||||||||| | | ||| ||||||||    |||||     
T  16626496 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctggttttctcccattctcatctccctc----ggtttg 16626401  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    ||||||||||| |||||||  |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||           |||| |||    
T  16626400 tgttgacgaacagttcttttcttcctccttctttggtttctcgagtggtctacgtgtcatattagagtggtttttcgaaac-----------catactga 16626312  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  16626311 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 16626212  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 619  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16626211 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaa-cttcaaattac 16626113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 221 - 611
Target Start/End: Complemental strand, 12934738 - 12934363
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  12934738 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 12934643  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||| ||||||||||||  |||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||||||           ||||||||    
T  12934642 tgttgatgaaccgttcttttcttcctccttctttgttttctcgagtggtctacgaaccatatttgagtggtttttcgaaac-----------catattga 12934554  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  12934553 ggtgttattctcgagagatttctggcagtgcaacctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 12934454  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||    
T  12934453 gcacaactcaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactca-cccggtaatagtttcaaagctctgtcgtaatttt 12934363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 221 - 622
Target Start/End: Original strand, 21080793 - 21081182
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| | | |||||||||| |||||||||||||||||| ||||| |||||||||||| ||| ||| ||| ||||    |||||     
T  21080793 tataaatagagagctcgggatttgcattcttcacttcaaaactgagaatcgaatcctcttctctggttttctccccttctcatcttcctc----ggtttg 21080888  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||           ||||||||    
T  21080889 tgttgacgaaccgttcttttcttcctccttctttggtttcttaagtggtctacgtaccatattagagtggttttttgaaac-----------catattga 21080977  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||||||||||| |||||||||||||||||||    
T  21080978 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggtgcggttgctagtctacctt 21081077  T
Q  520 gcaca--acggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatt 617  Q
    |||||  |   |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  21081078 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaatt 21081177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 221 - 616
Target Start/End: Complemental strand, 43893210 - 43892816
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||  ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  43893210 tataaatagagagctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 43893115  T
Q  320 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 418  Q
    |||||||||| ||||||||  |||||||  |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||  |    
T  43893114 tgttgacgaatcgttcttttcttcctcccctctttggtttctcgagtggtctacgtgccatactagagtggtttttcgaaacttttcgaaa-ccataccg 43893016  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 518  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  | ||||| |||||||||||||||||||||||||||||||||| |||||    
T  43893015 aggtgttattctcgagcgatttctagcagtgcaacctttaatcgtacagtaagaatctgagctgttttatcctggagacggcgcggttgctagtttacct 43892916  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 616  Q
    ||||||||  ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||  ||||  ||||||||| ||||||||| ||||    
T  43892915 tgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattatttcaaaaagctctgacgtaatttttaaat 43892816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 221 - 616
Target Start/End: Complemental strand, 42572286 - 42571904
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  42572286 tataaatagagaactcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 42572191  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||   ||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||           ||||||||    
T  42572190 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagtggtctacgaaccatatttgaatggtttttcgaaac-----------catattga 42572102  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    ||||||||||||||| |||||||||||||||| ||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  42572101 ggtgttattctcgagagatttctggcagtgcagcctttaattttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 42572002  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgtaattttcaaat 616  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  42572001 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaaagctccgtcgtaattttaaaat 42571904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 63 - 338
Target Start/End: Complemental strand, 33238568 - 33238296
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238568 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 33238469  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238468 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 33238369  T
Q  263 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  33238368 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 33238296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 47994340 - 47994094
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994340 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 47994241  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47994240 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 47994141  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  47994140 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 47994094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 221 - 611
Target Start/End: Complemental strand, 17495744 - 17495367
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | |||||| |||||||||| |||||| |||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  17495744 tataaatagagagctcgggaatgggattctttactccaaaaccgagaattgaatcctcttctctggttttctcgccttctcatctccctc----ggtttg 17495649  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||||           ||||| ||    
T  17495648 tgttgacgaaccgttcttttcttcctccttctttggtttcttgagtggtctacgtaccatataagagtggttttttgaaac-----------catatgga 17495560  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  17495559 ggtgttattctcgagcgatttctggcagtgctgcctttaatcgtacagtaagaatctgggctgttttatcttggagacggcgcggttgctagtctacctt 17495460  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgtaatttt 611  Q
    |||||||  ||||||||||||||||||||||||| |||||||||||| || |||||||| ||||||||||||| |||||||||||||||||||    
T  17495459 gcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcacctcggtaatagtttcaaaagctctgtcgtaatttt 17495367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 221 - 611
Target Start/End: Original strand, 17557470 - 17557847
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | |||||| |||||||||| |||||| |||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  17557470 tataaatagagagctcgggaatgggattctttactccaaaaccgagaattgaatcctcttctctggttttctcgccttctcatctccctc----ggtttg 17557565  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||||           ||||| ||    
T  17557566 tgttgacgaaccgttcttttcttcctccttctttggtttcttgagtggtctacgtaccatataagagtggttttttgaaac-----------catatgga 17557654  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  17557655 ggtgttattctcgagcgatttctggcagtgctgcctttaatcgtacagtaagaatctgggctgttttatcttggagacggcgcggttgctagtctacctt 17557754  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgtaatttt 611  Q
    |||||||  ||||||||||||||||||||||||| |||||||||||| || |||||||| ||||||||||||| |||||||||||||||||||    
T  17557755 gcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcacctcggtaatagtttcaaaagctctgtcgtaatttt 17557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 233 - 611
Target Start/End: Original strand, 32212419 - 32212784
Alignment:
Q  233 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggtttatgttgacgaacc 331  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| |||| ||||||| ||| ||| ||||||||    ||||| |||||| |||||    
T  32212419 gctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctgattttctccccttctcatctccctc----ggtttgtgttgatgaacc 32212514  T
Q  332 gttctttctttcctcctt-ctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattct 430  Q
    |||||||  ||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||           ||||||||||||||||| |    
T  32212515 gttcttttcttcctcctttctttggtttctcgagtggtcttcgtaccatattggagtggtttttcgaaac-----------catattgaggtgttatttt 32212603  T
Q  431 cgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggag 530  Q
    |||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||    
T  32212604 cgagcgatttctggcagtgcaacctttaatcgtacagaaagaatctgggctgttttatcctggagacagcgcggttgctagtctaccttgcacaatttag 32212703  T
Q  531 gtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  32212704 gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcataatttt 32212784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 63 - 293
Target Start/End: Complemental strand, 33243745 - 33243515
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33243745 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacacaaggatggagaaactagtgtaaagtgtg 33243646  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33243645 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 33243546  T
Q  263 tgagaatcgaatactcttatctggttttctc 293  Q
    |||||||||||||||||| ||||||||||||    
T  33243545 tgagaatcgaatactcttctctggttttctc 33243515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 47999515 - 47999269
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47999515 cttggagtatattagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtctcacatcg 47999416  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47999415 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 47999316  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  47999315 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 47999269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 221 - 616
Target Start/End: Original strand, 19309365 - 19309746
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||| ||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  19309365 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcaaatcctcttctctggttttctccccttctcatctccctc----ggtttg 19309460  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    ||||||||||| |||||||   ||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||           ||||||||    
T  19309461 tgttgacgaactgttcttttcctcctccttctttggtttctcgagtggtctacgaaccatatttgactggtttttcgaaac-----------catattga 19309549  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
     |||||||||||||| |||||||||||||||| ||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  19309550 agtgttattctcgagagatttctggcagtgcagcctttaatgttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 19309649  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgtaattttcaaat 616  Q
    |||||||  |||| |||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  19309650 gcacaacttaggtggtgccgcgaaacgtcttaaagacagcgacct-ggttggactcaccccggtaatagtttcaaaagctccgtcgtaattttaaaat 19309746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 385 - 616
Target Start/End: Original strand, 47177024 - 47177256
Alignment:
Q  385 agtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgtt 484  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||| ||||||    
T  47177024 agtggtttttcgaaacttttcgaaa-ccatactgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgagctgtt 47177122  T
Q  485 ttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggta 584  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  47177123 ttatcctgaagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 47177222  T
Q  585 atagtttc--aaagctctgtcgtaattttcaaat 616  Q
    || |||||  ||||||||||||||||||| ||||    
T  47177223 attgtttcaaaaagctctgtcgtaatttttaaat 47177256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 410 - 622
Target Start/End: Complemental strand, 33238168 - 33237954
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  33238168 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 33238069  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  33238068 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 33237969  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  33237968 ttttcaaattacaaa 33237954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 410 - 622
Target Start/End: Complemental strand, 33243345 - 33243131
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  33243345 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 33243246  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| || ||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  33243245 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagtgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 33243146  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  33243145 ttttcaaattacaaa 33243131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 410 - 618
Target Start/End: Complemental strand, 47999141 - 47998931
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  47999141 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 47999042  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  47999041 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 47998942  T
Q  608 ttttcaaatta 618  Q
    |||||||||||    
T  47998941 ttttcaaatta 47998931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 410 - 620
Target Start/End: Complemental strand, 47993966 - 47993754
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  47993966 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 47993867  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||  | |||||| ||||||||||||||| |||||||  ||||| |    
T  47993866 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggttgtgactcatcccggtaatagtttcaaaagctccatcgtata 47993767  T
Q  608 ttttcaaattaca 620  Q
    |||||||||||||    
T  47993766 ttttcaaattaca 47993754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 21080321 - 21080468
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080321 ggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21080420  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||    
T  21080421 aattgaaaattttatgtcccacgttgggtagatcacacactctagtag 21080468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 2233978 - 2234099
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  2233978 cttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 2234077  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  2234078 ggtagatcacacactctagtag 2234099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 32211965 - 32212112
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32211965 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgttgagactttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 32212064  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  32212065 aattgaaaattttatgtctcacattgggtagatcacacactctagtag 32212112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 42572747 - 42572600
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  42572747 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 42572648  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  42572647 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 42572600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 17496221 - 17496100
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  17496221 cttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 17496122  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  17496121 ggtagatcacacactctagtag 17496100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 17556993 - 17557114
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  17556993 cttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 17557092  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  17557093 ggtagatcacacactctagtag 17557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 12935231 - 12935084
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  12935231 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 12935132  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  12935131 aattgaaaattttatgtcccacattgggtagatcacacactttagtag 12935084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 19308876 - 19309023
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  19308876 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 19308975  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  19308976 aattgaaaattttatgtcccacattggatagatcacacactctagtag 19309023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 47176496 - 47176643
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  47176496 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 47176595  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  47176596 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 47176643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 509 - 630
Target Start/End: Original strand, 22857715 - 22857836
Alignment:
Q  509 tagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaat 608  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||| ||||    
T  22857715 tagtctaccttgcacaacttagatagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccggtaatagtttcaaagctctgtcataat 22857814  T
Q  609 tttcaaattacaaatacaacac 630  Q
    ||  |||||||||| |||||||    
T  22857815 ttgaaaattacaaaaacaacac 22857836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 16538699 - 16538813
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||   | ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  16538699 cttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattg 16538798  T
Q  189 ggtagatcacacact 203  Q
     ||||||||||||||    
T  16538799 agtagatcacacact 16538813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 16626963 - 16626849
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||   | ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  16626963 cttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattg 16626864  T
Q  189 ggtagatcacacact 203  Q
     ||||||||||||||    
T  16626863 agtagatcacacact 16626849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 43893689 - 43893542
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||| ||||||||||    
T  43893689 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagcgtaaagtgtg 43893590  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  43893589 aattgaaaattttatgtccctcattgggtagatcacacactctagtag 43893542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 9973565 - 9973452
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||   | ||||||||||||||||||||||||||||||||||| || ||    
T  9973565 atctgggttgttttatcctggagacggcgtggttgttcgtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 9973466  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  9973465 ctcaacccggtaat 9973452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 24528457 - 24528344
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||   |||| |||||| |||||||||||||| |||||||||| || ||    
T  24528457 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtga 24528358  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||| ||||    
T  24528357 ctcaacccgataat 24528344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 33226517 - 33226424
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgg 566  Q
    ||||| ||||||||||||||| ||||||| ||||| |||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||    
T  33226517 atctgagctgttttatcctggtgacggcgtggttgttagtctaccttgcataacttaggtagtgccgcgaaacgtcttaaagagagcgacctgg 33226424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 47544749 - 47544828
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgg 142  Q
    |||||||||||||||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47544749 ggaacactagtgtataatgaaaaaaacttggagtatactagagagtttgtggagcctttggaatgtaaacacaaggatgg 47544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 586
Target Start/End: Original strand, 28292496 - 28292607
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||   | |||||||||||||||||||||| | |||||||||| || ||    
T  28292496 atctgggctgttt-atcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtga 28292593  T
Q  573 ctcaccccggtaat 586  Q
    || | |||||||||    
T  28292594 cttaacccggtaat 28292607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 33241778 - 33241732
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  33241778 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 33241732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 47997575 - 47997529
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  47997575 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 47997529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 629 - 688
Target Start/End: Complemental strand, 5888458 - 5888399
Alignment:
Q  629 actactgaataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgc 688  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  5888458 actaccgaatatgatgagggacgccggaggtgaggtgatgcggaggccgcgcctcgtcgc 5888399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 637 - 690
Target Start/End: Original strand, 36935090 - 36935143
Alignment:
Q  637 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcac 690  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  36935090 ataggatgagggatgccggaggtgaggtgatgcggaggccgcgcctcgtcgcac 36935143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 47176904 - 47176993
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcc-tctcttctccctc 309  Q
    ||||||| ||||||||||||||   ||||||||||||||||| || |||||||| ||||| |||||||||||| || |||| ||||||||    
T  47176904 tataaatagagagctcgggaatgagattcttcactccaaaaccgataatcgaatcctcttctctggttttctccccttctcatctccctc 47176993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 4579603 - 4579507
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| |||||||||| || ||||||    
T  4579603 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 4579507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 585
Target Start/End: Complemental strand, 8076145 - 8076040
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacgg-aggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccc 579  Q
    ||||||||||||||| | ||| ||||| ||||||  |||||||||    ||| |||||| |||||||||||||||| |||||||||| || |||||| ||    
T  8076145 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 8076046  T
Q  580 cggtaa 585  Q
    | ||||    
T  8076045 cagtaa 8076040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 23246933 - 23247029
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||| ||||||||| |||||||||| || ||||||    
T  23246933 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactca 23247029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 26341294 - 26341198
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| ||||| |||||||||| |||||||||| || ||||||    
T  26341294 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 26341198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 585
Target Start/End: Complemental strand, 12254174 - 12254069
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaac-ggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccc 579  Q
    |||||||||||| || ||||| | ||| |||||| |||||||||||   ||| |||||| | |||| ||||||||| |||||||||| || |||||| ||    
T  12254174 tgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatcttaaagagagcgacctggtcgcgactcaacc 12254075  T
Q  580 cggtaa 585  Q
     |||||    
T  12254074 tggtaa 12254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 235; Significance: 1e-129; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 221 - 629
Target Start/End: Original strand, 8962 - 9356
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | ||||||||||||||||  ||||||||||| ||||| ||| |||||||| ||| ||| ||||||||    |||||     
T  8962 tataaatagagagctcgggaatgggattcttcactccaaaaacgagaatcgaatcctcttctctagttttctccccttctcatctccctc----ggtttg 9057  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    ||||||||||| |||||||  ||||||||| |||||||| ||||||||| | |||||||||||||||||||||||||||||           ||||||||    
T  9058 tgttgacgaactgttcttttcttcctccttgtttggtttctcgagtggtttgcgtaccatattagagtggtttttcgaaac-----------catattga 9146  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  9147 ggtgttattctcgagcaatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtcttcctt 9246  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 619  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9247 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 9346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 8534 - 8681
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8534 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8633  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8634 aatttaaaattttatgtcccacattgggtagatcacacactctagtag 8681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 231; Significance: 1e-127; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 211 - 631
Target Start/End: Complemental strand, 37361 - 36956
Alignment:
Q  211 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 309  Q
    ||||||||  ||||||| ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||| ||||    
T  37361 aaatcctctctataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatcttcctc 37262  T
Q  310 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 409  Q
        ||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||             
T  37261 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggttttttgaaac--------- 37175  T
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
      ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||   | |||||||||||||||||||||||||||||||||||||    
T  37174 --catattgaggtgttattctcgagcgatttttggcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgct 37077  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatt 609  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||| |    
T  37076 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccagtaatagtttcaaagctctgtcgtaa-t 36978  T
Q  610 ttcaaattacaaatacaacact 631  Q
    ||||||||||||| ||||||||    
T  36977 ttcaaattacaaaaacaacact 36956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 37712 - 37654
Alignment:
Q  152 tgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  37712 tgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactccagtag 37654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 228; Significance: 1e-125; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 221 - 622
Target Start/End: Original strand, 21643835 - 21644222
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| | | ||||||||    |||||     
T  21643835 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttcccatctccctc----ggtttg 21643930  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||||||||           ||||||||    
T  21643931 tgttgatgaaccgttctttttttcctccttctttggtttctcgagtggtctgcgtaccatattatagtggcttttcgaaac-----------catattga 21644019  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||    
T  21644020 ggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagtcggcgcggttgctagtctacctt 21644119  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 619  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||||||||||||||||||||    
T  21644120 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgattcaccccggtaatactttcaaagctctgtcgtaattttcaaattac 21644219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 211 - 629
Target Start/End: Complemental strand, 24885064 - 24884660
Alignment:
Q  211 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 309  Q
    ||||||||  ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    
T  24885064 aaatcctctctataaatagagagctcgggaatggaattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 24884965  T
Q  310 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 409  Q
        ||||| |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||             
T  24884964 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac--------- 24884878  T
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgtttt-atcctggagacggcgcggttgc 508  Q
      |||||||||||||||||||||||||||||||||||||||| |||||||||||||||     |||||||||||||| ||||||||||||||| ||||||    
T  24884877 --catattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagaaataatctgggctgtttttatcctggagacggcgtggttgc 24884780  T
Q  509 tagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaat 608  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||| |||||     
T  24884779 tagtctaccttgcacaacttaggtagtgccgcaaaacgtcttaaagaaagctacctggtcgtgactcaccccggtaatagtttcaaagctctgccgtaa- 24884681  T
Q  609 tttcaaattacaaatacaaca 629  Q
    |||||||||||||| ||||||    
T  24884680 tttcaaattacaaaaacaaca 24884660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 307 - 611
Target Start/End: Original strand, 17955626 - 17955919
Alignment:
Q  307 ctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcg 406  Q
    ||||| |||||| |||||||||| ||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||          
T  17955626 ctccctcggtttgtgttgacgaatcgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac------ 17955719  T
Q  407 aaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggtt 506  Q
         |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  17955720 -----catattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggtt 17955814  T
Q  507 gctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgta 606  Q
    |||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  17955815 gctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgta 17955914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 32011066 - 32010820
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32011066 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 32010967  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32010966 ggtagatcatacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 32010867  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  32010866 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 32010820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 221 - 611
Target Start/End: Original strand, 43998984 - 43999360
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||| |   |||||| |||| ||||||||||||||||| ||||| |||| ||||||| ||| ||| ||||||||    |||||     
T  43998984 tataaatagagagctcgggatttacattctttactctaaaactgagaatcgaatcctcttctctgattttctccccttctcatctccctc----ggtttg 43999079  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  43999080 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattga 43999168  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 519  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  43999169 ggtgttattctcgagcgatttttggtagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcagttgctagtctacctt 43999268  T
Q  520 gcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    ||||||   ||||||||||||||||||| ||||||||| |||||||  || |||||| ||| ||||||||||||||||||||||||||||||    
T  43999269 gcacaatttaggtagtgccgcgaaacgttttaaagaaaacgacctgatcgtgactcaacccagtaatagtttcaaagctctgtcgtaatttt 43999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 32016240 - 32015994
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32016240 cttggagtatactagtgaatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 32016141  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32016140 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 32016041  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  32016040 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 32015994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 63 - 318
Target Start/End: Original strand, 2165394 - 2165650
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttgg-aatgtaaacacaaggatggagaaactagtgtaaagtgt 161  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  2165394 ggaacactagtgtataatgaaaaaattttggagtatactagtgagtttgtggagtctttgggaatgtaaacacaaggatggagaaactagtgtaaagtgt 2165493  T
Q  162 gaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaa 261  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2165494 gaattgaaaattttatgtctcacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaa 2165593  T
Q  262 ctgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggttt 318  Q
     |||||||| ||| ||||| ||| |||||||||| ||||||||||||||||||||||    
T  2165594 ttgagaatcaaatgctcttctctagttttctctcatctcttctccctcccgcggttt 2165650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 341 - 622
Target Start/End: Original strand, 42514245 - 42514515
Alignment:
Q  341 ttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgattt 440  Q
    |||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  42514245 ttcctccttctttgttttctcgagtggtctgcgtactatattagagtggtttttcgaaac-----------catattgaggtgttattctcgagcgattt 42514333  T
Q  441 ctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgc 540  Q
    ||||||||||| ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  42514334 ctggcagtgcagcctttaatcgtacagtttgaacctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgc 42514433  T
Q  541 gaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 622  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42514434 gaaacgtcttaaagaaagcgacctggtcatgactcaccccggtaatagttttaaagctctgtcgtaattttcaaattacaaa 42514515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 410 - 629
Target Start/End: Complemental strand, 32015866 - 32015645
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  32015866 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 32015767  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   |||||||||| |||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  32015766 agtctaccttgcacaattcaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 32015667  T
Q  608 ttttcaaattacaaatacaaca 629  Q
    ||||||||||||||| ||||||    
T  32015666 ttttcaaattacaaaaacaaca 32015645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 221 - 495
Target Start/End: Original strand, 21643395 - 21643652
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    | |||     
T  21643395 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----gatttg 21643490  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 419  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||           ||||||||||||    
T  21643491 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggcttttcg-----------aaaccatattga 21643579  T
Q  420 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggag 495  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  21643580 ggtgttattctcgagcgattt---gcagtgcaacctttaatcgtacagttagaatctgggctgttttatcctggag 21643652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 43998546 - 43998693
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43998546 ggaacactagtgtataatgaaaaaaacttggagtatactagttggtttgtggagcctttgaaatgtaaacacaaggatggagaaactagtgtaaagtgtg 43998645  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  43998646 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 43998693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 17955134 - 17955281
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||||||       ||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17955134 ggaacactagtgtataatggaaaagacttagagtatactagttgttttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtgaagtgtg 17955233  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  17955234 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 17955281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 24885445 - 24885324
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||   | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  24885445 cttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 24885346  T
Q  189 ggtagatcacacactctagtag 210  Q
    ||||||||||||||||||||||    
T  24885345 ggtagatcacacactctagtag 24885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 221 - 388
Target Start/End: Original strand, 21641520 - 21641684
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    ||||||    
T  21641520 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggttta 21641615  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21641616 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21641684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 221 - 388
Target Start/End: Original strand, 21641895 - 21642059
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    ||||||    
T  21641895 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggttta 21641990  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21641991 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 221 - 388
Target Start/End: Original strand, 21642270 - 21642434
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    ||||||    
T  21642270 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggttta 21642365  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21642366 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 221 - 388
Target Start/End: Original strand, 21643020 - 21643184
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  21643020 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 21643115  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21643116 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21643184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 42513848 - 42513995
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| | |||||||||||||||||||||| ||||| ||||||||||||||    
T  42513848 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaaatagtgtaaagtgtg 42513947  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  42513948 aattgaaaattttatgtcccacattggatagatcacacactctagtag 42513995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 221 - 388
Target Start/End: Original strand, 21642645 - 21642809
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  21642645 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 21642740  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 388  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21642741 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 19430117 - 19430004
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||| || ||    
T  19430117 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19430018  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  19430017 ctcaacccggtaat 19430004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 19435619 - 19435506
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||| || ||    
T  19435619 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19435520  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  19435519 ctcaacccggtaat 19435506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 19566266 - 19566153
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||| || ||    
T  19566266 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19566167  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  19566166 ctcaacccggtaat 19566153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 19571768 - 19571655
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||| || ||    
T  19571768 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19571669  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||||||||    
T  19571668 ctcaacccggtaat 19571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 473 - 576
Target Start/End: Original strand, 33616719 - 33616822
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||| || ||    
T  33616719 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 33616818  T
Q  573 ctca 576  Q
    ||||    
T  33616819 ctca 33616822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 21641184 - 21641273
Alignment:
Q  120 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21641184 ttggaatgtaaatacaaggatgtagat-ctagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 21641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 586
Target Start/End: Complemental strand, 31030631 - 31030518
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcggga 572  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||    ||||||| |||||||||||||||||| |||||||||| || ||    
T  31030631 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcataatttgggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtga 31030532  T
Q  573 ctcaccccggtaat 586  Q
    |||| |||| ||||    
T  31030531 ctcaacccgataat 31030518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 529 - 629
Target Start/End: Complemental strand, 32010585 - 32010483
Alignment:
Q  529 aggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-attttcaaattacaaataca 626  Q
    |||||||||||||||| |||||||| | |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |||||||||||||||| |||    
T  32010585 aggtagtgccgcgaaatgtcttaaaaagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtatattttcaaattacaaaaaca 32010486  T
Q  627 aca 629  Q
    |||    
T  32010485 aca 32010483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 566
Target Start/End: Complemental strand, 13584454 - 13584360
Alignment:
Q  480 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaac---gga-----ggtagtgccgcgaaacgtcttaaagaaagcgacctgg 566  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||   |||     |||||||||||||||||||||||||| ||||||||||    
T  13584454 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtcttaaagagagcgacctgg 13584360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 21645574 - 21645620
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21645574 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 21645620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 32014301 - 32014255
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32014301 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 32014255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 637 - 692
Target Start/End: Complemental strand, 38148759 - 38148704
Alignment:
Q  637 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcacca 692  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||| ||||||||    
T  38148759 ataggatgagggacgccggaggtgaggtgatgcggaggccgcacctcatcgcacca 38148704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 42514182 - 42514245
Alignment:
Q  229 gagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttct 292  Q
    ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  42514182 gagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctggttttct 42514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 410 - 464
Target Start/End: Complemental strand, 32010659 - 32010605
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgta 464  Q
    ||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||    
T  32010659 accatatcgaggtgtcattctcgagcgatttctggcagtgtagcctttaatcgta 32010605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 637 - 692
Target Start/End: Original strand, 20519763 - 20519818
Alignment:
Q  637 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcacca 692  Q
    ||||||||||| || |||||| | ||||||||||||||| ||||||||||||||||    
T  20519763 ataggatgaggaacaccggaggtaaggtgatgcggaggccgcgcctcgtcgcacca 20519818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 525
Target Start/End: Original strand, 43302718 - 43302762
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||    
T  43302718 tgttttatcctggaggcggcgtggttgatagtctaccttgcacaa 43302762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 44925923 - 44926019
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||| ||||||| |||||||||| || ||||||    
T  44925923 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactca 44926019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 566
Target Start/End: Original strand, 15875668 - 15875754
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgg 566  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| ||||||||| |||||| ||||||||||    
T  15875668 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctgg 15875754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 19434043 - 19434003
Alignment:
Q  17 actaagaatggtatttttgttgggaaagggtacgccactga 57  Q
    |||||| ||||  ||||||||||||||||||||||||||||    
T  19434043 actaaggatggggtttttgttgggaaagggtacgccactga 19434003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 19570192 - 19570152
Alignment:
Q  17 actaagaatggtatttttgttgggaaagggtacgccactga 57  Q
    |||||| ||||  ||||||||||||||||||||||||||||    
T  19570192 actaaggatggggtttttgttgggaaagggtacgccactga 19570152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 210; Significance: 1e-115; HSPs: 5)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 221 - 616
Target Start/End: Original strand, 13493 - 13877
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  13493 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 13588  T
Q  320 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 418  Q
    |||||||||||| ||||||  |||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||           |||| ||    
T  13589 tgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaac-----------catactg 13677  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 518  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  13678 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 13777  T
Q  519 tgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 616  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  13778 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattgtttcaaaaagctctgtcgtaatttttaaat 13877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 221 - 611
Target Start/End: Original strand, 18946 - 19328
Alignment:
Q  221 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 319  Q
    ||||||| |||||||| ||| | |||||||| |||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  18946 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 19041  T
Q  320 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 418  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  19042 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 19130  T
Q  419 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgc---ggttgctagtc 513  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||   | ||||||||||||||||||||||||||||||   |||||||||||    
T  19131 aggtgttattctcgagcgatttctggcagtgaaacctttaatcgtacagttttagaatctgggctgttttatcctggagacggcgccgcggttgctagtc 19230  T
Q  514 taccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatttt 611  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||| || |||||||||| |||||| |||| ||||||||||||||||||    
T  19231 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaatattttcgaagctctgtcgtaatttt 19328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 12986 - 13133
Alignment:
Q  63 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 162  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  12986 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13085  T
Q  163 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13086 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 18500 - 18590
Alignment:
Q  120 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 210  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18500 ttggaatgtaaacacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 18590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 15233 - 15279
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15233 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 15279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 203; Significance: 1e-110; HSPs: 5)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 32085 - 31839
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32085 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 31986  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31985 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaaaactgagaatcgaatactcttatctggtt 31886  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  31885 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 31839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 26913 - 26667
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26913 cttggagtatactagtgagtttgtggagcctttggaatgtaaacaaaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 26814  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26813 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaaaactgagaatcgaatactcttatctggtt 26714  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  26713 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 26667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 410 - 629
Target Start/End: Complemental strand, 31711 - 31492
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  31711 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgct 31612  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttcaaagctctgtcgtaatt 609  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  31611 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 31512  T
Q  610 ttcaaattacaaatacaaca 629  Q
    ||||||||||||| ||||||    
T  31511 ttcaaattacaaaaacaaca 31492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 410 - 622
Target Start/End: Complemental strand, 26539 - 26325
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| ||||||||| |||||||||||||||| ||||||||||||||||  | || ||||||||||||||||||||||||||||||||||    
T  26539 accatatcgaggtgtcattctcgagagatttctggcagtgcagcctttaatcgtacagtaagaatatgggctgttttatcctggagacggcgcggttgct 26440  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||| ||  ||  ||||| ||||||||||||||| |||||||  ||||| |    
T  26439 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttgatcgtaactcatcccggtaatagtttcaaaagctccatcgtata 26340  T
Q  608 ttttcaaattacaaa 622  Q
    |||||||||||||||    
T  26339 ttttcaaattacaaa 26325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 30148 - 30102
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30148 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 30102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 89 - 338
Target Start/End: Complemental strand, 3564 - 3318
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3564 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcc 3465  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3464 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 3365  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  3364 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 410 - 629
Target Start/End: Complemental strand, 3224 - 3003
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  3224 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 3125  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  3124 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 3025  T
Q  608 ttttcaaattacaaatacaaca 629  Q
    ||||||||||||||| ||||||    
T  3024 ttttcaaattacaaaaacaaca 3003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 89 - 338
Target Start/End: Original strand, 80971 - 81217
Alignment:
Q  89 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  80971 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcc 81070  T
Q  189 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  81071 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 81170  T
Q  289 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 338  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  81171 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 81217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 410 - 629
Target Start/End: Original strand, 81311 - 81532
Alignment:
Q  410 accatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 509  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  81311 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 81410  T
Q  510 agtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccccggtaatagtttc-aaagctctgtcgta-a 607  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||  ||||| |    
T  81411 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 81510  T
Q  608 ttttcaaattacaaatacaaca 629  Q
    ||||||||||||||| ||||||    
T  81511 ttttcaaattacaaaaacaaca 81532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 1668 - 1575
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgg 566  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||    
T  1668 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctgg 1575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 7149 - 7056
Alignment:
Q  473 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgg 566  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||   |||||||||||||||||||||||||| | ||||||||    
T  7149 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagaacgacctgg 7056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 474 - 586
Target Start/End: Original strand, 2765 - 2877
Alignment:
Q  474 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggac 573  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||   ||||||| | ||||||||||||||||  ||||||||| || |||    
T  2765 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgac 2864  T
Q  574 tcaccccggtaat 586  Q
    ||| |||||||||    
T  2865 tcaacccggtaat 2877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 474 - 586
Target Start/End: Original strand, 10725 - 10837
Alignment:
Q  474 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggac 573  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||   ||||||| | ||||||||||||||||  ||||||||| || |||    
T  10725 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgac 10824  T
Q  574 tcaccccggtaat 586  Q
    ||| |||||||||    
T  10825 tcaacccggtaat 10837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 15588 - 15542
Alignment:
Q  13 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15588 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 15542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 586
Target Start/End: Original strand, 33968 - 34074
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactcaccc 579  Q
    |||||||||||| ||  || ||||||| || ||||||||| |||| |   |||||||||||||||||||||||||| |||||||||| || |||||| ||    
T  33968 tgttttatcctgaaggaggagcggttgttattctaccttgtacaaactttggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 34067  T
Q  580 cggtaat 586  Q
    || ||||    
T  34068 cgataat 34074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 7199 - 7103
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| |||||||||| || ||||||    
T  7199 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 7103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 576
Target Start/End: Original strand, 9887 - 9983
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| |||||||||||||||| |||||||||| || ||||||    
T  9887 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 4169 - 4073
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cggaggtagtgccgcgaaacgtcttaaagaaagcgacctgggcgggactca 576  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||     || |||||| ||||| |||||||||| |||||||||| || ||||||    
T  4169 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 4073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 35729 - 35685
Alignment:
Q  481 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 525  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  35729 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 35685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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