View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21529_low_2 (Length: 387)
Name: NF21529_low_2
Description: NF21529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21529_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 10 - 371
Target Start/End: Original strand, 3263312 - 3263671
Alignment:
| Q |
10 |
catcatcaatccactagagacaacacaacactaacaaaatttatatcaaaattcaatcatttcgacaattccaactaatttcctacaaaaacacagacaa |
109 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
3263312 |
catcatcaatccactagagacaacacaagactaacaaaatttatatcaaaattcaatcattccgacaattccaactaatttcctacaaaaacacagacaa |
3263411 |
T |
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| Q |
110 |
atttaacaatcttcaaaccacaacatcccaacccaaactcaaaagaaaactacaaaatcaatccactatacacaactcaacaaaacataatcatactact |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3263412 |
atttaacaatcttcaaaccacaacatcccaacccaaactcaaaagaacgctacaaaatcaatccactatacacaactcaacaaaacataatcatactact |
3263511 |
T |
|
| Q |
210 |
aaatcttaaacacatcataataacaaaattcacatcaaacttcaatcattgaaacaattccaaccactttcacacaaaaaacacagacgaatttcacaat |
309 |
Q |
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|||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
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| T |
3263512 |
aaatcttaaacacaacataataac-aaattcacatcaaatttcaatcattgaaacaattccaaccactttcacac-aaaaacacagacaaatttcacaat |
3263609 |
T |
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| Q |
310 |
cttcaaactacaattccccatatcaaatctaacttttttataacaattgaagataaaaatca |
371 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3263610 |
cttcaaactacaattccccatatcaaatctaacttttttataacaattgaagataaaaatca |
3263671 |
T |
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