View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2152_low_2 (Length: 577)

Name: NF2152_low_2
Description: NF2152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2152_low_2
NF2152_low_2
[»] chr4 (3 HSPs)
chr4 (18-479)||(2004845-2005305)
chr4 (530-564)||(2004747-2004781)
chr4 (495-523)||(2016226-2016254)
[»] chr6 (5 HSPs)
chr6 (18-480)||(25421812-25422270)
chr6 (34-479)||(5374638-5375078)
chr6 (207-480)||(34823933-34824206)
chr6 (356-480)||(33459775-33459899)
chr6 (207-302)||(33459953-33460048)
[»] chr8 (3 HSPs)
chr8 (207-480)||(2996638-2996911)
chr8 (176-469)||(20076689-20076983)
chr8 (174-455)||(25575637-25575918)
[»] chr3 (4 HSPs)
chr3 (207-480)||(37192212-37192485)
chr3 (363-469)||(19472692-19472798)
chr3 (174-301)||(19472531-19472658)
chr3 (210-243)||(13890257-13890290)
[»] chr2 (2 HSPs)
chr2 (174-455)||(26361279-26361560)
chr2 (258-455)||(18499692-18499889)
[»] scaffold0779 (1 HSPs)
scaffold0779 (174-455)||(3999-4280)
[»] chr1 (1 HSPs)
chr1 (391-442)||(19571331-19571382)


Alignment Details
Target: chr4 (Bit Score: 406; Significance: 0; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 18 - 479
Target Start/End: Complemental strand, 2005305 - 2004845
Alignment:
Q  18 aaacattgtcagatgatgactcttgaagtacatttgtgtgatagttccatggaatgtttgaaggatttgactgataaggcaaagtacattcatgatgagt 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2005305 aaacattgtcagatgatgactctcgaagtacatttgtgtgatagttccatggaatgtttgaaggatttgactgataaggcaaagtacattcatgatgagt 2005206  T
Q  118 gacatttctgaaaacaaaaatttgttttgaatgaatgaatatctaaaagaacaacacctttcatgccactcttgtaacccagaaaaa---tgcattttct 214  Q
    |||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||    
T  2005205 gacatttctggaaacaaaaatttgttttgaatgaat----atctaaaagaacaacacctttcatgccactcttgtaacccaaaaaaaaaatgcattttct 2005110  T
Q  215 tgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaaccaaaaactttgagttgatgtaaatcaggttgtattttatgc 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2005109 tgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaatgaaccaaaaactttgagttgatgtaaatcaggttgtattttatgc 2005010  T
Q  315 attaaaaactatggagattgattttgtaaaacaggagtaggcactctattcatgatgaatactgcatgaactgcagcataagaccaaaaacttttaggta 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  2005009 attaaaaactatggagattgattttgtaaaacaggagtaggcactctattcatgatgaatactgcatgatctgcatcataagaccaaaaacttttaggta 2004910  T
Q  415 aatgtgattgaaaaagtaaagctctagtgatatttaaaatggattgatgttttctctcaactcta 479  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2004909 aatgtgattgaaaaagtaaagctctagtgatatttaaaatagattgatgttttctctcaactcta 2004845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 530 - 564
Target Start/End: Complemental strand, 2004781 - 2004747
Alignment:
Q  530 agcggcctcccatttttgcacatttttaaaatgat 564  Q
    |||||||||||||||||||||||||||||||||||    
T  2004781 agcggcctcccatttttgcacatttttaaaatgat 2004747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 523
Target Start/End: Complemental strand, 2016254 - 2016226
Alignment:
Q  495 tttattttattcttttgcaaaatttctta 523  Q
    |||||||||||||||||||||||||||||    
T  2016254 tttattttattcttttgcaaaatttctta 2016226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 366; Significance: 0; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 18 - 480
Target Start/End: Original strand, 25421812 - 25422270
Alignment:
Q  18 aaacattgtcagatgatgactcttgaagtacatttgtgtgatagttccatggaatgtttgaaggatttgactgataaggcaaagtacattcatgatgagt 117  Q
    ||||||| |||||||| |||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  25421812 aaacattttcagatgaggactctagaagtacatttgtctgatagttccatagaatgtttgaaggatttgactaataaggcaaaatacattcatgatgagt 25421911  T
Q  118 gacatttctgaaaacaaaaatttgttttgaatgaatgaatatctaaaagaacaacacctttcatgccactcttgtaacccagaaaaatgcattttcttgc 217  Q
    |||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25421912 gacatttctgaaaacaaaaatttgttttgaa----tgaatatctaaaagaacaacacctttcatgccactcttgtaacccagaaaattgcattttcttgc 25422007  T
Q  218 tctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaaccaaaaactttgagttgatgtaaatcaggttgtattttatgcatt 317  Q
    ||||||||||||||||||||||||||| ||||||||  || |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||     
T  25422008 tctagaagcaagtttacttctatgagcatgtaaagtagaatcatatgctaatgaaccaaaaactttgagttgatgtaaatcaggttgtatttgatgcata 25422107  T
Q  318 aaaaactatggagattgattttgtaaaacaggagtaggcactctattcatgatgaatactgcatgaactgcagcataagaccaaaaacttttaggtaaat 417  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  25422108 aaaaaatatggagattgattttgtaaaacaggagtaggcactctattcatgatgaatactgcatgaacaacatcataagaccaaaaacttttaggtaaat 25422207  T
Q  418 gtgattgaaaaagtaaagctctagtgatatttaaaatggattgatgttttctctcaactctag 480  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25422208 gtgattgaaaaagtaaagctctagtgatatttaaaatagattgatgttttctctcaactctag 25422270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 34 - 479
Target Start/End: Original strand, 5374638 - 5375078
Alignment:
Q  34 tgactcttgaagtacatttgtgtgatagttccatggaatgtttgaaggatttgactgataaggcaaagtacattcatgatgagtgacatttctgaaaaca 133  Q
    ||||||||||  || |||||||||||||||||||| ||||||| ||| ||||||||||||||| ||| | |||||||||||||| |||||| |  |||||    
T  5374638 tgactcttgacttatatttgtgtgatagttccatgaaatgtttaaagaatttgactgataaggtaaaatgcattcatgatgagtaacatttatataaaca 5374737  T
Q  134 aaaatttgttttgaatgaatgaatatctaaaagaacaacacctttcatgccactcttgtaacccagaaaaatgcattttcttgctctagaagcaagttta 233  Q
     |||||||||||||| | |||    ||||| |||||||| |||||||| ||||| ||||||||  |||||||||||||||||||||||||||||||||||    
T  5374738 gaaatttgttttgaacgtatg----tctaagagaacaactcctttcatcccacttttgtaaccatgaaaaatgcattttcttgctctagaagcaagttta 5374833  T
Q  234 cttctatgagcctgtaaagtttaagcatatgctaaagaaccaaaaactttgagttgatgtaaatcaggttgtattttatgcattaaaaactatggagatt 333  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||| | |||||  ||||||||||||||| ||||||||| |||||| ||||| ||      
T  5374834 cttctatgagcctgtaaagtagaagcatatgctaatgaaccaaaaacct-gagttagtgtaaatcaggttgtgttttatgcaataaaaaatatggtgaaa 5374932  T
Q  334 gattttgtaaaacaggagtaggcactctattcatgatgaatactgcatgaactgcagcataagaccaaaaacttttaggtaaatgtgattgaaaaagtaa 433  Q
    ||||||||||||||| | |||||||||||||||||||  | |||||||||||||||||||||||||||||| | ||||| ||||| |||||||| |||||    
T  5374933 gattttgtaaaacagaactaggcactctattcatgatagaaactgcatgaactgcagcataagaccaaaaattcttaggcaaatgagattgaaagagtaa 5375032  T
Q  434 agctctagtgatatttaaaatggattgatgttttctctcaactcta 479  Q
    || |||||| |  |||||||||  ||| ||||||||||||| ||||    
T  5375033 agttctagtaaagtttaaaatgtgttggtgttttctctcaattcta 5375078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 207 - 480
Target Start/End: Complemental strand, 34824206 - 34823933
Alignment:
Q  207 cattttcttgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaaccaaaaactttgagttgatgtaaatcaggttgta 306  Q
    ||||||||||||||||||||||||||  |||| |  || ||||||||  | | | |  ||||||||||||||||||| | ||||| ||||||||||        
T  34824206 cattttcttgctctagaagcaagtttgtttctgtttgcttgtaaagtggatgaaaaaactaaagaaccaaaaactttcaattgatttaaatcaggtatct 34824107  T
Q  307 ttttatgcattaaaaactatggagattgattttgtaaaacaggagtaggcactctattcatgatgaatactgcatgaactgcagcataagaccaaaaact 406  Q
     |||||||| || ||| || ||||  | ||| |  | || |||  | | |||||||||||||||||| || |||||||  ||||||||||||||||||      
T  34824106 gtttatgcaatagaaaataaggagtgttattgtcaataatagggctggtcactctattcatgatgaagacagcatgaatagcagcataagaccaaaaatg 34824007  T
Q  407 tttaggtaaatgtgattgaaaaagtaaagctctagtgatatttaaaatggattgatgttttctctcaactctag 480  Q
    |||||| | ||||||||||||||||||||||||    || |||||||||  |||||||||||| ||||||||||    
T  34824006 tttaggaagatgtgattgaaaaagtaaagctctcacaatgtttaaaatgtgttgatgttttctttcaactctag 34823933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 356 - 480
Target Start/End: Complemental strand, 33459899 - 33459775
Alignment:
Q  356 cactctattcatgatgaatactgcatgaactgcagcataagaccaaaaacttttaggtaaatgtgattgaaaaagtaaagctctagtgatatttaaaatg 455  Q
    |||||||||||||||||| || |||||||  |||||||||||||||||   |||||| | || |||||||||||||||||||||    || |||||||||    
T  33459899 cactctattcatgatgaagacagcatgaatagcagcataagaccaaaattgtttaggaagatttgattgaaaaagtaaagctctcacaatgtttaaaatg 33459800  T
Q  456 gattgatgttttctctcaactctag 480  Q
      | |||||||||| ||||||||||    
T  33459799 tgtcgatgttttctttcaactctag 33459775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 302
Target Start/End: Complemental strand, 33460048 - 33459953
Alignment:
Q  207 cattttcttgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaaccaaaaactttgagttgatgtaaatcaggt 302  Q
    ||||||||||||||||||||||||||  |||| |  || ||||||||  | | | |  ||||||||||||||||||| ||||||| ||||||||||    
T  33460048 cattttcttgctctagaagcaagtttgtttctgtttgcttgtaaagtagatgaaaaaactaaagaaccaaaaacttttagttgatttaaatcaggt 33459953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 207 - 480
Target Start/End: Complemental strand, 2996911 - 2996638
Alignment:
Q  207 cattttcttgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaaccaaaaactttgagttgatgtaaatcaggttgta 306  Q
    ||||||||||||||||||||||||||  |||| |  || ||||||||  | | | |  ||||||||||||||||||| ||||||| ||||||||||        
T  2996911 cattttcttgctctagaagcaagtttgtttctgtttgcttgtaaagtggatgaaaaaactaaagaaccaaaaactttcagttgatttaaatcaggtatct 2996812  T
Q  307 ttttatgcattaaaaactatggagattgattttgtaaaacaggagtaggcactctattcatgatgaatactgcatgaactgcagcataagaccaaaaact 406  Q
     |||||||| || ||| || ||||  | ||| |  | || |||  | | |||||||||||||||||| || |||||||  |||||||||||||||||       
T  2996811 gtttatgcaatagaaaataaggagtgttattatcaataatagggctggtcactctattcatgatgaagacagcatgaatagcagcataagaccaaaattg 2996712  T
Q  407 tttaggtaaatgtgattgaaaaagtaaagctctagtgatatttaaaatggattgatgttttctctcaactctag 480  Q
    |||||| | || |||||||||||||||||||||    || |||||||||  |||||||||||| ||||||||||    
T  2996711 tttaggaagatttgattgaaaaagtaaagctctcacaatgtttaaaatgtgttgatgttttctttcaactctag 2996638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 469
Target Start/End: Complemental strand, 20076983 - 20076689
Alignment:
Q  176 tttcatgccactctt-gtaacccagaaaaatgcattttcttgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaacc 274  Q
    |||||| |||||||| |||||| |||||||  || ||||||||||||| | |||||||| ||||||  ||||| | |||| | ||||| |||||||| ||    
T  20076983 tttcattccactctttgtaaccaagaaaaacacactttcttgctctaggatcaagtttaattctatttgcctgaagagttgatgcataagctaaagagcc 20076884  T
Q  275 aaaaactttgagttgatgtaaatcaggttgtattttatgcattaaaaactatggagattgattttgtaaaacaggagtaggcactctattcatgatgaat 374  Q
    |||||||||    ||||| ||||||||   |   || |||| ||| || || || | |||||| |  ||||  ||| | || ||||| |||||||||||     
T  20076883 aaaaactttttaatgatgcaaatcaggagtttgattgtgcaataagaaataaggtgtttgattgttcaaaatgggactgggaactctgttcatgatgaaa 20076784  T
Q  375 actgcatgaactgcagcataagaccaaaaacttttaggtaaatgtgattgaaaaagtaaagctctagtgatatttaaaatggattgatgttttct 469  Q
    ||  ||||||  ||| |||| ||||||||| | || |||||||||||||||||||| |||||||| ||||| |||||||||  ||||||||||||    
T  20076783 acaacatgaatagcaacatatgaccaaaaattcttgggtaaatgtgattgaaaaagcaaagctctggtgatgtttaaaatgtgttgatgttttct 20076689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 455
Target Start/End: Original strand, 25575637 - 25575918
Alignment:
Q  174 cctttcatgccactcttgtaacccagaaaaatgcattttcttgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaac 273  Q
    |||||||| |||||||| || || |||||||  || || ||||||||||||| ||||||  ||||   || ||| | |||| | ||||| ||||||||||    
T  25575637 cctttcataccactcttatatccaagaaaaacacacttccttgctctagaagaaagttttattctgctagactgaagagttgatgcataagctaaagaac 25575736  T
Q  274 caaaaactttgagttgatgtaaatcaggttgtattttatgcattaaaaactatggagattgattttgtaaaacaggagtaggcactctattcatgatgaa 373  Q
    |||||||||| | ||||||||||||||  | | | ||||| | ||  || || |||| ||  || | |||||  ||| |||| |||||||||| ||| ||    
T  25575737 caaaaacttttaattgatgtaaatcagcatttttattatgtaataggaaataaggagttttgttatttaaaatgggactaggaactctattcacgataaa 25575836  T
Q  374 tactgcatgaactgcagcataagaccaaaaacttttaggtaaatgtgattgaaaaagtaaagctctagtgatatttaaaatg 455  Q
     || |||||||  |||||||| ||||||||  |||| |||||||| ||||||||||| | ||||||||| || || ||||||    
T  25575837 aacagcatgaatagcagcataggaccaaaattttttgggtaaatgagattgaaaaagaagagctctagtaatgttcaaaatg 25575918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 207 - 480
Target Start/End: Complemental strand, 37192485 - 37192212
Alignment:
Q  207 cattttcttgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaaccaaaaactttgagttgatgtaaatcaggttgta 306  Q
    ||||||||||||||||||||||||||  || | |  || ||||||||  | | | |  ||||||||||||||||||| ||||||| ||||||||||        
T  37192485 cattttcttgctctagaagcaagtttgtttatgtttgcttgtaaagtggatgaaaaaactaaagaaccaaaaactttcagttgatttaaatcaggtatct 37192386  T
Q  307 ttttatgcattaaaaactatggagattgattttgtaaaacaggagtaggcactctattcatgatgaatactgcatgaactgcagcataagaccaaaaact 406  Q
     |||||||| || ||| || ||||  | ||| |  | || |||  | | |||||||||||||||||| || |||||||  |||||||||||||||||       
T  37192385 gtttatgcaatagaaaataaggagtgttattgtcaataatagggctggtcactctattcatgatgaagacagcatgaatagcagcataagaccaaaattg 37192286  T
Q  407 tttaggtaaatgtgattgaaaaagtaaagctctagtgatatttaaaatggattgatgttttctctcaactctag 480  Q
    |||||| | ||||||||||||||||||||||||    || |||||||||  |||||||||||| ||||||||||    
T  37192285 tttaggaagatgtgattgaaaaagtaaagctctcacaatgtttaaaatgtgttgatgttttctttcaactctag 37192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 363 - 469
Target Start/End: Original strand, 19472692 - 19472798
Alignment:
Q  363 ttcatgatgaatactgcatgaactgcagcataagaccaaaaacttttaggtaaatgtgattgaaaaagtaaagctctagtgatatttaaaatggattgat 462  Q
    ||||||||||| || |||||||  | |||||| ||||||||| | || |||||||||||||||||| |||||||||| ||||| |||||||||  |||||    
T  19472692 ttcatgatgaaaacagcatgaatagaagcatacgaccaaaaattcttgggtaaatgtgattgaaaatgtaaagctctggtgatgtttaaaatgtgttgat 19472791  T
Q  463 gttttct 469  Q
    |||||||    
T  19472792 gttttct 19472798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 19472531 - 19472658
Alignment:
Q  174 cctttcatgccactcttgtaacccagaaaaatgcattttcttgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaac 273  Q
    |||||||| || ||||||||||| |||||||  || ||||||||||||| | |||||||| ||||||  ||||| | |||| | ||||| |||||||| |    
T  19472531 cctttcattccgctcttgtaaccaagaaaaacacactttcttgctctaggatcaagtttaattctatttgcctgaagagttgatgcataagctaaagagc 19472630  T
Q  274 caaaaactttgagttgatgtaaatcagg 301  Q
    |||||||||| |  ||||||||||||||    
T  19472631 caaaaacttttaaatgatgtaaatcagg 19472658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 13890290 - 13890257
Alignment:
Q  210 tttcttgctctagaagcaagtttacttctatgag 243  Q
    |||||||||||||||||||||||| |||||||||    
T  13890290 tttcttgctctagaagcaagtttagttctatgag 13890257  T

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Target: chr2 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 455
Target Start/End: Original strand, 26361279 - 26361560
Alignment:
Q  174 cctttcatgccactcttgtaacccagaaaaatgcattttcttgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaac 273  Q
    |||||||| |||||||| || || |||||||  || || ||||||||||||| ||||||  ||||    | ||| | |||| | ||||| ||||||||||    
T  26361279 cctttcataccactcttatatccaagaaaaacacacttccttgctctagaagaaagttttattctgctggactgaagagttgatgcataagctaaagaac 26361378  T
Q  274 caaaaactttgagttgatgtaaatcaggttgtattttatgcattaaaaactatggagattgattttgtaaaacaggagtaggcactctattcatgatgaa 373  Q
    |||||||||| | ||||||||||||||  | | | ||||| | ||| || || |||| ||  || | |||||  ||| |||| |||||||||||||| ||    
T  26361379 caaaaacttttaattgatgtaaatcagcatttttattatgtaataagaaataaggagttttgttatttaaaatgggactaggaactctattcatgataaa 26361478  T
Q  374 tactgcatgaactgcagcataagaccaaaaacttttaggtaaatgtgattgaaaaagtaaagctctagtgatatttaaaatg 455  Q
     || |||||||  |||||||| ||||||||| |||| |||||||| ||||||||||| | ||||||||| || || ||||||    
T  26361479 aacagcatgaatagcagcataggaccaaaaagttttgggtaaatgagattgaaaaagaagagctctagtaatgttcaaaatg 26361560  T

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Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 258 - 455
Target Start/End: Original strand, 18499692 - 18499889
Alignment:
Q  258 gcatatgctaaagaaccaaaaactttgagttgatgtaaatcaggttgtattttatgcattaaaaactatggagattgattttgtaaaacaggagtaggca 357  Q
    ||||| |||||||||||||||||||| | ||||||||||||||  | | | ||||| | ||| || || |||| ||  || | |||||  ||| |||| |    
T  18499692 gcataagctaaagaaccaaaaacttttaattgatgtaaatcagcatttttattatgtaataagaaataaggagttttgttatttaaaatgggactaggaa 18499791  T
Q  358 ctctattcatgatgaatactgcatgaactgcagcataagaccaaaaacttttaggtaaatgtgattgaaaaagtaaagctctagtgatatttaaaatg 455  Q
    ||||||||||||| || || |||||||  |||||||| ||||||||| |||| |||||||| ||||||||||| | ||||||||| || || ||||||    
T  18499792 ctctattcatgataaaaacagcatgaatagcagcataggaccaaaaagttttgggtaaatgagattgaaaaagaagagctctagtaatgttcaaaatg 18499889  T

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Target: scaffold0779 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0779
Description:

Target: scaffold0779; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 455
Target Start/End: Complemental strand, 4280 - 3999
Alignment:
Q  174 cctttcatgccactcttgtaacccagaaaaatgcattttcttgctctagaagcaagtttacttctatgagcctgtaaagtttaagcatatgctaaagaac 273  Q
    |||||||| |||||||| || || |||||||  || || ||||||||||||| ||||||  ||||   || ||| | |||| | ||||| ||||||||||    
T  4280 cctttcataccactcttatatccaagaaaaacacacttccttgctctagaagaaagttttattctgctagactgaagagttgatgcataagctaaagaac 4181  T
Q  274 caaaaactttgagttgatgtaaatcaggttgtattttatgcattaaaaactatggagattgattttgtaaaacaggagtaggcactctattcatgatgaa 373  Q
    |||||||||| | ||||||||||||||  | | | ||||| | ||  || || |||| ||  || | |||||  ||| |||| |||||||||| ||| ||    
T  4180 caaaaacttttaattgatgtaaatcagcatttttattatgtaataggaaataaggagttttgttatttaaaatgggactaggaactctattcacgataaa 4081  T
Q  374 tactgcatgaactgcagcataagaccaaaaacttttaggtaaatgtgattgaaaaagtaaagctctagtgatatttaaaatg 455  Q
     || |||||||  |||||||| ||||||||  |||| |||||||| ||||||||||| | ||||||||| || || ||||||    
T  4080 aacagcatgaatagcagcataggaccaaaattttttgggtaaatgagattgaaaaagaagagctctagtaatgttcaaaatg 3999  T

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Target: chr1 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 19571382 - 19571331
Alignment:
Q  391 cataagaccaaaaacttttaggtaaatgtgattgaaaaagtaaagctctagt 442  Q
    |||||||||||||| |||| ||||||| |||||||||||| ||| |||||||    
T  19571382 cataagaccaaaaagttttgggtaaatttgattgaaaaagcaaatctctagt 19571331  T

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