View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2152_low_4 (Length: 273)
Name: NF2152_low_4
Description: NF2152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2152_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 27119593 - 27119348
Alignment:
| Q |
17 |
ctagctagaaattccacagcctagctagagaaacaaaaacaaatgtaaaagagagtgaataatcaccggaagcggagaatctgtagccttaaactttccc |
116 |
Q |
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| T |
27119593 |
ctagctagaaattccacagcctagctagagaaacaaaaacaaatgtagaagagagtgaataatcaccggaagcggagaatctgtagccttaaactttccc |
27119494 |
T |
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| Q |
117 |
tgccttcttttaccatcaacagggttaagagcagctgcaacaactttaataagaacctgatcttccttaacatcaggtacagcaacattggagtcaaatt |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27119493 |
tgccttcttttaccatcaacagggttaagagcagctgcaacaactttaacaagaacctgatcttccttaacatcaggtacagcaacattggagtcaaatt |
27119394 |
T |
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| Q |
217 |
tcaaaacatcaacacctccatattctccatacacccaagccttcat |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27119393 |
tcaaaacatcaacacctccatattctccatacacccaagccttcat |
27119348 |
T |
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