View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21530_high_10 (Length: 254)
Name: NF21530_high_10
Description: NF21530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21530_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 37085322 - 37085565
Alignment:
| Q |
1 |
ctttttcattggggagctttggtttgtcaaagatatacttgtattggaggtgtctagaactcccgtttcaaatgtactattgagtttctgtcctaaatct |
100 |
Q |
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| T |
37085322 |
ctttttcattggggagctttggtttgtcaaagatatacttgtattggaggtgtctagaactcccgtttcaaatgtactattgagtttctgtcctaaatct |
37085421 |
T |
|
| Q |
101 |
gagtgcatttgcagattgacaccaaacaatttataaccatcaagtgtaccggaatttcgaacattagttggacatggtgaaggttcattttccaagacag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37085422 |
gagtgcatttgcagattgacaccaaacaatttataaccatcaagtgtaccggaatttcgaacattagttggacatggtgaaggttcattttccaagacag |
37085521 |
T |
|
| Q |
201 |
acataccaccagcactaagttctatgttgtctcgttcttctctg |
244 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
37085522 |
acataccaccagcactaagttctatgttgtctcgttcttttctg |
37085565 |
T |
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