View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21530_high_13 (Length: 216)
Name: NF21530_high_13
Description: NF21530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21530_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 32015820 - 32015903
Alignment:
| Q |
98 |
ataatagccaaatgggtacgaaaaggaatgcattatatgtttcgataattattctgtccctcttattttaatttcttatgttca |
181 |
Q |
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| T |
32015820 |
ataatagccaaatggatacgaaaaggaatgcattatatgtttcgataattattctgtccctcttattttaatttcttatgttca |
32015903 |
T |
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Target: chr3; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 32013642 - 32013721
Alignment:
| Q |
19 |
actatcatgtctagttaaattgacggtgtacttaaacaaggacaataatttatgatttgttgcaattaattagtctaata |
98 |
Q |
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| T |
32013642 |
actatcatgtctagttaaattgactgtgtacttaaacaaggacaataatttatgatttgttacaattaattagtctaata |
32013721 |
T |
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