View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21530_high_7 (Length: 275)

Name: NF21530_high_7
Description: NF21530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21530_high_7
NF21530_high_7
[»] chr5 (27 HSPs)
chr5 (6-254)||(17153000-17153259)
chr5 (7-188)||(40187732-40187913)
chr5 (98-188)||(12457440-12457530)
chr5 (29-182)||(18451967-18452120)
chr5 (12-188)||(29664808-29664984)
chr5 (7-252)||(6809996-6810246)
chr5 (122-252)||(16311294-16311435)
chr5 (12-173)||(24207527-24207685)
chr5 (22-249)||(27900405-27900641)
chr5 (7-191)||(7350480-7350664)
chr5 (7-191)||(38972754-38972938)
chr5 (6-171)||(35583948-35584112)
chr5 (23-188)||(8020467-8020628)
chr5 (131-249)||(32574942-32575071)
chr5 (104-170)||(457466-457532)
chr5 (187-256)||(12712554-12712623)
chr5 (187-252)||(12773822-12773887)
chr5 (98-249)||(16366454-16366615)
chr5 (187-256)||(34259278-34259347)
chr5 (126-191)||(39887174-39887239)
chr5 (137-187)||(39422313-39422363)
chr5 (158-191)||(27088425-27088458)
chr5 (187-252)||(28569022-28569087)
chr5 (150-191)||(38006542-38006583)
chr5 (187-243)||(23045001-23045057)
chr5 (212-252)||(38972970-38973010)
chr5 (212-252)||(39422394-39422434)
[»] chr8 (33 HSPs)
chr8 (6-237)||(6388531-6388762)
chr8 (14-252)||(29918446-29918695)
chr8 (12-191)||(36274880-36275058)
chr8 (7-191)||(28345323-28345507)
chr8 (14-191)||(8545421-8545598)
chr8 (96-192)||(30903967-30904063)
chr8 (7-191)||(5700188-5700372)
chr8 (98-187)||(17108299-17108388)
chr8 (22-188)||(17084182-17084350)
chr8 (96-191)||(9476085-9476180)
chr8 (6-252)||(29416187-29416435)
chr8 (158-241)||(35215531-35215613)
chr8 (98-188)||(5793508-5793598)
chr8 (191-249)||(15173883-15173941)
chr8 (98-241)||(39379591-39379743)
chr8 (158-243)||(4230739-4230824)
chr8 (76-172)||(12468309-12468405)
chr8 (134-252)||(14155491-14155620)
chr8 (211-249)||(27777201-27777239)
chr8 (150-191)||(14186295-14186336)
chr8 (187-256)||(17469278-17469347)
chr8 (187-243)||(1063530-1063586)
chr8 (204-256)||(9642347-9642399)
chr8 (137-191)||(30481493-30481547)
chr8 (204-249)||(5858655-5858700)
chr8 (7-68)||(9476199-9476260)
chr8 (212-249)||(14186368-14186405)
chr8 (187-248)||(32392390-32392451)
chr8 (186-243)||(40248380-40248437)
chr8 (187-252)||(43113626-43113691)
chr8 (186-234)||(24189530-24189578)
chr8 (187-243)||(29108831-29108887)
chr8 (211-243)||(39445585-39445617)
[»] chr1 (41 HSPs)
chr1 (12-252)||(13692482-13692718)
chr1 (7-188)||(42729019-42729200)
chr1 (108-252)||(33293531-33293675)
chr1 (7-189)||(41477026-41477208)
chr1 (31-187)||(36421623-36421779)
chr1 (14-188)||(25181043-25181218)
chr1 (105-256)||(48125679-48125841)
chr1 (22-191)||(8880296-8880465)
chr1 (23-191)||(39219107-39219275)
chr1 (158-252)||(24710842-24710936)
chr1 (14-183)||(5293490-5293659)
chr1 (16-184)||(25154906-25155074)
chr1 (7-62)||(14902973-14903028)
chr1 (22-188)||(16903369-16903537)
chr1 (158-252)||(35936829-35936922)
chr1 (158-252)||(39616287-39616381)
chr1 (103-188)||(43513104-43513189)
chr1 (204-252)||(10778567-10778615)
chr1 (134-252)||(13798198-13798327)
chr1 (160-243)||(19003675-19003757)
chr1 (190-248)||(16237308-16237366)
chr1 (7-60)||(14890995-14891048)
chr1 (187-252)||(34085259-34085324)
chr1 (187-252)||(35069889-35069954)
chr1 (103-176)||(47644946-47645019)
chr1 (187-243)||(51421882-51421938)
chr1 (130-188)||(5283668-5283726)
chr1 (158-188)||(29871360-29871390)
chr1 (187-252)||(36617384-36617450)
chr1 (187-236)||(5293421-5293470)
chr1 (204-249)||(16433170-16433215)
chr1 (187-252)||(41476952-41477017)
chr1 (159-191)||(12494995-12495027)
chr1 (211-243)||(19572521-19572553)
chr1 (96-188)||(23719525-23719616)
chr1 (210-242)||(25154837-25154869)
chr1 (204-252)||(42707837-42707885)
chr1 (205-249)||(47644863-47644907)
chr1 (99-175)||(48576206-48576282)
chr1 (213-249)||(49098330-49098366)
chr1 (159-191)||(49741079-49741111)
[»] chr6 (25 HSPs)
chr6 (7-191)||(9402421-9402605)
chr6 (6-187)||(34346081-34346271)
chr6 (24-191)||(8320867-8321034)
chr6 (12-191)||(1947863-1948042)
chr6 (51-191)||(13768948-13769088)
chr6 (14-185)||(2126699-2126870)
chr6 (55-188)||(29341131-29341269)
chr6 (187-252)||(9458686-9458751)
chr6 (187-252)||(18908916-18908981)
chr6 (23-184)||(14321717-14321876)
chr6 (187-249)||(28079699-28079761)
chr6 (6-60)||(29340751-29340805)
chr6 (26-252)||(20348916-20349152)
chr6 (139-191)||(256564-256616)
chr6 (209-252)||(256492-256535)
chr6 (191-242)||(29199895-29199946)
chr6 (187-234)||(34178347-34178394)
chr6 (98-188)||(372857-372946)
chr6 (187-249)||(14410858-14410920)
chr6 (6-60)||(29342114-29342168)
chr6 (210-243)||(7978595-7978628)
chr6 (204-241)||(9442470-9442507)
chr6 (187-256)||(14506109-14506178)
chr6 (12-69)||(24221453-24221510)
chr6 (187-243)||(27738795-27738851)
[»] chr4 (53 HSPs)
chr4 (12-192)||(33616187-33616367)
chr4 (16-190)||(42907734-42907907)
chr4 (14-242)||(7334208-7334433)
chr4 (6-191)||(36918961-36919145)
chr4 (26-188)||(8843880-8844042)
chr4 (26-188)||(8856844-8857006)
chr4 (7-252)||(12075632-12075888)
chr4 (7-188)||(21714051-21714232)
chr4 (24-187)||(33516149-33516313)
chr4 (16-191)||(37926408-37926581)
chr4 (7-182)||(36306623-36306798)
chr4 (26-191)||(21956887-21957051)
chr4 (7-191)||(25940978-25941160)
chr4 (7-171)||(17113096-17113259)
chr4 (16-171)||(25265240-25265394)
chr4 (12-186)||(9929245-9929419)
chr4 (160-252)||(41914997-41915089)
chr4 (20-183)||(30034525-30034688)
chr4 (108-187)||(40420662-40420741)
chr4 (16-170)||(35304611-35304764)
chr4 (23-188)||(9280965-9281130)
chr4 (94-191)||(37384198-37384294)
chr4 (108-190)||(50376425-50376507)
chr4 (23-166)||(39086007-39086152)
chr4 (186-243)||(3737804-3737861)
chr4 (7-256)||(25298830-25299089)
chr4 (187-252)||(43309512-43309577)
chr4 (113-252)||(4741217-4741366)
chr4 (204-256)||(12825458-12825510)
chr4 (126-181)||(24474524-24474579)
chr4 (126-188)||(12505606-12505668)
chr4 (211-249)||(25941191-25941229)
chr4 (187-249)||(29527841-29527903)
chr4 (99-181)||(43553371-43553458)
chr4 (187-236)||(31415948-31415997)
chr4 (187-256)||(31782642-31782711)
chr4 (12-85)||(40420754-40420827)
chr4 (12-56)||(4652603-4652647)
chr4 (188-256)||(10574416-10574484)
chr4 (187-242)||(21544608-21544663)
chr4 (217-252)||(37349171-37349206)
chr4 (187-249)||(14605929-14605991)
chr4 (23-117)||(23927785-23927879)
chr4 (187-249)||(47103767-47103829)
chr4 (191-252)||(1866550-1866611)
chr4 (211-256)||(11173026-11173071)
chr4 (187-252)||(16575141-16575206)
chr4 (187-252)||(26564860-26564925)
chr4 (158-191)||(37349112-37349145)
chr4 (186-235)||(45065277-45065326)
chr4 (159-191)||(1724383-1724415)
chr4 (159-191)||(7985194-7985226)
chr4 (100-188)||(53906757-53906843)
[»] chr3 (23 HSPs)
chr3 (12-191)||(27252405-27252583)
chr3 (7-181)||(26207119-26207290)
chr3 (12-249)||(37032113-37032347)
chr3 (102-191)||(30904887-30904976)
chr3 (187-252)||(19111757-19111822)
chr3 (27-189)||(3385930-3386092)
chr3 (12-118)||(34592993-34593099)
chr3 (27-189)||(3414607-3414769)
chr3 (12-170)||(27937568-27937734)
chr3 (187-252)||(34119679-34119744)
chr3 (189-252)||(35687491-35687554)
chr3 (134-252)||(42243346-42243475)
chr3 (147-191)||(4553162-4553206)
chr3 (187-249)||(4016047-4016109)
chr3 (187-241)||(40796148-40796202)
chr3 (98-175)||(772882-772958)
chr3 (195-248)||(3385860-3385913)
chr3 (126-191)||(40890298-40890362)
chr3 (186-243)||(48390826-48390883)
chr3 (209-249)||(4553235-4553275)
chr3 (14-62)||(40890203-40890251)
chr3 (204-256)||(49025720-49025772)
chr3 (187-243)||(49580087-49580143)
[»] chr7 (36 HSPs)
chr7 (26-188)||(11472788-11472949)
chr7 (14-184)||(37217848-37218017)
chr7 (13-243)||(3156926-3157167)
chr7 (6-191)||(3773905-3774090)
chr7 (160-252)||(42908041-42908133)
chr7 (158-241)||(24753163-24753246)
chr7 (16-191)||(29292536-29292723)
chr7 (7-188)||(43550491-43550671)
chr7 (100-256)||(23475259-23475427)
chr7 (206-252)||(29014952-29014998)
chr7 (100-191)||(19440082-19440174)
chr7 (14-191)||(23533675-23533854)
chr7 (190-252)||(27063169-27063231)
chr7 (98-191)||(4101470-4101563)
chr7 (148-184)||(36251009-36251045)
chr7 (186-250)||(37103129-37103193)
chr7 (28-175)||(31345384-31345531)
chr7 (187-242)||(32546220-32546275)
chr7 (204-250)||(673130-673176)
chr7 (190-248)||(33841109-33841167)
chr7 (187-256)||(3920566-3920635)
chr7 (158-191)||(27850398-27850431)
chr7 (191-243)||(18684006-18684058)
chr7 (187-246)||(45885771-45885830)
chr7 (187-249)||(18825875-18825937)
chr7 (187-249)||(44845138-44845200)
chr7 (187-252)||(10995834-10995899)
chr7 (223-252)||(11472714-11472743)
chr7 (191-252)||(30839134-30839195)
chr7 (217-246)||(44658473-44658502)
chr7 (187-243)||(3226955-3227011)
chr7 (27-188)||(6557799-6557962)
chr7 (204-252)||(37218050-37218098)
chr7 (187-243)||(41103684-41103740)
chr7 (204-252)||(41741450-41741498)
chr7 (187-243)||(45380135-45380191)
[»] chr2 (31 HSPs)
chr2 (6-188)||(30696756-30696938)
chr2 (14-188)||(34544386-34544560)
chr2 (6-243)||(25210209-25210457)
chr2 (127-252)||(37309744-37309867)
chr2 (7-191)||(35248457-35248637)
chr2 (7-191)||(35965167-35965352)
chr2 (7-169)||(29656829-29656992)
chr2 (7-256)||(35409163-35409408)
chr2 (99-191)||(17845463-17845556)
chr2 (12-188)||(34214732-34214907)
chr2 (98-191)||(13531873-13531966)
chr2 (40-190)||(13954611-13954761)
chr2 (40-190)||(14095818-14095968)
chr2 (14-158)||(31600873-31601017)
chr2 (12-137)||(40734709-40734834)
chr2 (73-188)||(11958914-11959029)
chr2 (187-249)||(43371577-43371639)
chr2 (191-252)||(30978955-30979014)
chr2 (187-249)||(38342522-38342584)
chr2 (187-248)||(3547190-3547251)
chr2 (211-252)||(34214657-34214698)
chr2 (139-191)||(4961523-4961575)
chr2 (210-249)||(22900841-22900880)
chr2 (187-249)||(15546768-15546830)
chr2 (100-150)||(33174319-33174369)
chr2 (7-56)||(4961609-4961658)
chr2 (164-201)||(26755741-26755778)
chr2 (92-169)||(40359262-40359339)
chr2 (149-189)||(34320598-34320638)
chr2 (217-249)||(35965388-35965420)
chr2 (187-243)||(37106716-37106772)
[»] scaffold0244 (1 HSPs)
scaffold0244 (12-170)||(4673-4831)
[»] scaffold1322 (1 HSPs)
scaffold1322 (7-184)||(944-1120)
[»] scaffold0184 (1 HSPs)
scaffold0184 (187-252)||(2992-3057)
[»] scaffold0059 (1 HSPs)
scaffold0059 (187-252)||(70118-70183)
[»] scaffold0198 (1 HSPs)
scaffold0198 (137-191)||(20811-20865)
[»] scaffold0157 (1 HSPs)
scaffold0157 (126-188)||(14809-14871)
[»] scaffold0036 (1 HSPs)
scaffold0036 (187-249)||(33416-33478)
[»] scaffold0008 (2 HSPs)
scaffold0008 (187-242)||(67772-67827)
scaffold0008 (187-242)||(75615-75670)
[»] scaffold0005 (1 HSPs)
scaffold0005 (187-249)||(211387-211449)
[»] scaffold0013 (1 HSPs)
scaffold0013 (187-252)||(128121-128186)
[»] scaffold0182 (1 HSPs)
scaffold0182 (187-247)||(16990-17050)
[»] scaffold0009 (1 HSPs)
scaffold0009 (209-249)||(107394-107434)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 4e-84; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 6 - 254
Target Start/End: Original strand, 17153000 - 17153259
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgag 105  Q
    ||||| ||||||||| |||||||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||||| |||||||| ||||||||||    
T  17153000 aggagaagagagagggcgagagtgtgagatatggaagaagaaaatagagaactatgataagtgaatctcatttgaaagactgagtatctgactgtgtgag 17153099  T
Q  106 tgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgg-----------gtaca 194  Q
    |||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||           |||||    
T  17153100 tgaaattatttaggttttggatttctatttatctagaaggggtaataaattgattttctacattcgggacgggtttgggtatgggtttgggatgagtaca 17153199  T
Q  195 tatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagt 254  Q
    |||||| |||||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  17153200 tatatcatagttatccgtcccgtacccatgttttaaaatcggaaaaaactcaaactcagt 17153259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 40187913 - 40187732
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| |||||||| ||||||||||||||||||||| | || || |||||||||||| |||||| | |||| |||||||  ||   ||| ||| |||||||    
T  40187913 ggagaagagagagaccgagagtgtgagatatggaatgagataagagagaactatgataagtgagtgtcatctgaaagattgaaactctgactatgtgagt 40187814  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
     |||| ||||||| ||||  || |||||||| |||||| | ||||||||| |||||||| |||||||||| |||||||||||    
T  40187813 aaaatgatttaggattttcattactatttatataaaagaggtaataaattaattttctatattcgggacgagtttgggtatg 40187732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 12457440 - 12457530
Alignment:
Q  98 tgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |||||||||||||| ||||||  ||| ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||    
T  12457440 tgtgtgagtgaaatgatttagactttaggtttctatttatattaaaggggtaataaattgattttctacattcgggacgggtttgggtatg 12457530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 18452120 - 18451967
Alignment:
Q  29 gtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttggtt 128  Q
    ||||| ||||||||| ||||| ||||||| |||| |||||| | |||| ||||||||||||  | |||||||||||||||||| || || | ||    ||    
T  18452120 gtgagttatggaaggagaaaagagagaaccatgataagtgactatcatctgaaagaccgagactttaactgtgtgagtgaaatgatctaagattcgtatt 18452021  T
Q  129 tctatttatctaaaagggataataaattgattttctacattcgggacgggtttg 182  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||| |||||    
T  18452020 tctattaatataaaagggataataaattgattttctacaatcgggacgagtttg 18451967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 29664808 - 29664984
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    ||||||||||| ||||||| |||||| ||| | ||||| |||||| ||||| |||||| | |||| ||||| || |||  ||| ||  ||| | ||||||    
T  29664808 agagagaggccaagagtgttagatattgaaagagaaaagagagaattatgataagtgagtgtcatctgaaatactgagactctgacaatgtaaatgaaat 29664907  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
     ||||||  |||  |||||||||||  |||||||| || |||||||||||| |||||||||||||||||||||||||    
T  29664908 gatttagagtttgagtttctatttaaataaaaggggtagtaaattgattttgtacattcgggacgggtttgggtatg 29664984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 252
Target Start/End: Original strand, 6809996 - 6810246
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||||||||||| | ||||||| |||||||| ||||| |||||||||||| || | |   |||  ||||| ||||||      | |||||||||    
T  6809996 ggagaagagagaggccgaaattgtgagacatggaaggagaaaagagagaactatgataaataagggtcaactgaaataccgag------attgtgtgagt 6810089  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgg-----------gtacat 195  Q
    ||||| ||||| | ||| |||||||||| || ||||||||  |||||||||||||||  ||||||||| ||||||||||||||           |||| |    
T  6810090 gaaatcatttaaggtttgggtttctattgatataaaaggggcaataaattgattttcaccattcgggatgggtttgggtatgggttcggggtgagtactt 6810189  T
Q  196 atatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||| |||| |||| ||||||||||||| | |||||||| ||||| ||||||||    
T  6810190 atatcctcgttacccgttccgtacccgtgttctaaaatcggggaaaacccaaactca 6810246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 252
Target Start/End: Complemental strand, 16311435 - 16311294
Alignment:
Q  122 tttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttg-----------ggtatgggtacatatatcctagttatcc 210  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||           ||  ||||||| |||||||  |||||||    
T  16311435 tttggtttctatttatataaaagggataataaattgattttcaacattcgagacaggtttgaatatgggttcggggtgggtacctatatccctgttatcc 16311336  T
Q  211 gtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||| ||||| |||||||||||||||| |||||||||||||||    
T  16311335 gtctcgtactcgtgttttgaaatcggaaaaaactcaaactca 16311294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 24207527 - 24207685
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    |||||||||  ||||||||||||||  ||||| ||||| |||||||||| | |||| | | |||| |||||||| |||  ||||   ||||||||||| |    
T  24207527 agagagaggttgagagtgtgagataatgaaggagaaaagagagaactattataagttagtgtcatctgaaagactgagactcta---gtgtgagtgaagt 24207623  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcggg 173  Q
    |||||||| |||| |||| ||||||| |||||||  ||||||||| ||||||||||||||||    
T  24207624 tatttagggttttagtttttatttatataaaaggattaataaattaattttctacattcggg 24207685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 249
Target Start/End: Complemental strand, 27900641 - 27900405
Alignment:
Q  22 cgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtt 121  Q
    ||||||| ||||||||| |||| || || ||||||||||   |||||| | |||| |||||||| || |  || | ||||||| |||||| ||||||| |    
T  27900641 cgagagtatgagatatgtaaggagataagagagaactatattaagtgagtgtcatctgaaagactgatt--ctgaatgtgtgactgaaatgatttagggt 27900544  T
Q  122 tttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtat-----------gggtacatatatcctagttatcc 210  Q
    ||  |||||||||||| |||||| |  |||||||||||||| |||||||||| ||| |||||||||           |||||| |||||||   ||| ||    
T  27900543 ttcagtttctatttatataaaagaggaaataaattgattttatacattcggggcggatttgggtatgggttcgagatgggtacctatatccacattaccc 27900444  T
Q  211 gtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  27900443 gtcccatacccatgttttgaaatcgggaaaaactcaaac 27900405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 7350664 - 7350480
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| |||||| || ||||| |||||||||||||||| || || |||||||||||| ||||||   || | | |||||  | |  ||||||| |||||||    
T  7350664 ggagaagagaggggtcgagaatgtgagatatggaaggagataagagagaactatgataagtgagcgtcgtctcaaagattgcgactctaactatgtgagt 7350565  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
     |||| ||||||| ||| | || |||||||| |||||| ||||||||||| |||||||||||| | |||||||||  ||||||||    
T  7350564 aaaatgatttagggtttcgattactatttatataaaagcgataataaattaattttctacatttgagacgggtttaagtatgggt 7350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 38972754 - 38972938
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| |||||||| | |||||||||| ||||| |||| || || |||||||||||| |||||| | |||| |||||||   ||  |||||| |||||| |    
T  38972754 ggagaagagagagacagagagtgtgatatatgaaaggagataagagagaactatgataagtgagtgtcatatgaaagatttagactctaacagtgtgaat 38972853  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
     |||| ||||||| |||  ||||| |||||| |||||||| ||||||||||||||| | |||| | || ||||||| ||||||||    
T  38972854 caaatgatttagggtttcagtttcgatttatataaaagggttaataaattgattttatgcatttgagatgggtttgagtatgggt 38972938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 171
Target Start/End: Original strand, 35583948 - 35584112
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgag 105  Q
    ||||| || |||| |||||||||||| |||||| |||| ||||| |||||||  ||| || ||| |  ||| |||||||| |||  ||| ||||||||||    
T  35583948 aggagaagggagatgccgagagtgtgggatatgaaaggagaaaacagagaacagtgataaatgagtgacatctgaaagactgagactctgactgtgtgag 35584047  T
Q  106 tgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcg 171  Q
      |||| ||||||| |||  |||||||||||| |||||||| ||||||||||||||| ||||||||    
T  35584048 caaaatgatttagggtttgagtttctatttatataaaaggg-taataaattgattttgtacattcg 35584112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 8020467 - 8020628
Alignment:
Q  23 gagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggttt 122  Q
    |||||||||| || ||| ||| ||||| | ||||||||||  ||||    ||||||||||||| |||  ||| ||||| |||||| ||| ||||||| ||    
T  8020467 gagagtgtgatatttggtaggagaaaaaaaagaactatgatgagtg----tcatttgaaagactgagactctgactgtttgagtggaataatttagggtt 8020562  T
Q  123 ttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    | |||||   ||||| |||||||| || |||||||||||||||||||| | ||||||||| |||||    
T  8020563 taggttttcctttatataaaaggggtagtaaattgattttctacattcagaacgggtttgcgtatg 8020628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 249
Target Start/End: Complemental strand, 32575071 - 32574942
Alignment:
Q  131 tatttatctaaaagggataataaattgattttctacattcgggacgggtttgggt-----------atgggtacatatatcctagttatccgtcccgtac 219  Q
    ||||||| |||||||| |||||||||||| ||||||||||||| |||||||||||           ||||||||||||||||  |||| || |||||||     
T  32575071 tatttatataaaaggggtaataaattgatattctacattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtat 32574972  T
Q  220 ccgtgttttgaaatcgggaaaaactcaaac 249  Q
    | |||||||||||||||| ||||| |||||    
T  32574971 ctgtgttttgaaatcggggaaaacccaaac 32574942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 457532 - 457466
Alignment:
Q  104 agtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattc 170  Q
    |||||||| ||||||| ||||||||||||||||| |||||||  ||||||||||||||| |||||||    
T  457532 agtgaaatgatttaggattttggtttctatttatataaaaggtgtaataaattgattttatacattc 457466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 12712623 - 12712554
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    ||||||||||||||   |||||||||||||||||||| ||||||||||||  ||||| ||||||||||||    
T  12712623 tgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaactcagtca 12712554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 12773887 - 12773822
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||||||   |||||||||||||||||||| ||||||||||||  ||||| ||||||||    
T  12773887 tgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaactca 12773822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 249
Target Start/End: Complemental strand, 16366615 - 16366454
Alignment:
Q  98 tgtgtgagtgaaattatttaggtttttg-gtttctatttatctaaaaggga-taataaattgattttctacattcgggacgggtttgggtatggg----- 190  Q
    |||||||  ||||| ||||| | ||||| |||||| ||||| ||||||||| ||||||| | ||||||||||||||||||| ||||||||  |||         
T  16366615 tgtgtgacggaaatgatttatggttttgagtttctttttatataaaagggagtaataaaataattttctacattcgggacgagtttgggttcgggaaggg 16366516  T
Q  191 --tacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaa-aaactcaaac 249  Q
      ||||||||||   ||||  | |||||||||||| ||||||||||||||| ||||||||||    
T  16366515 tatacatatatctctgttactcatcccgtacccgtattttgaaatcgggaagaaactcaaac 16366454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 34259278 - 34259347
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    |||||||||||||||| |||| |||||| |||||| | ||||||||||| | |||| |||||| ||||||    
T  34259278 tgggtacatatatcctcgttacccgtccggtacccatattttgaaatcgaggaaaattcaaacccagtca 34259347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 39887239 - 39887174
Alignment:
Q  126 gtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||||||||| |||||| || |||||||||||||||||| ||  ||||||||||| || |||||    
T  39887239 gtttctatttatataaaagagagaataaattgattttctacgtttaggacgggtttgagtgtgggt 39887174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 39422313 - 39422363
Alignment:
Q  137 tctaaaagggataataaattgattttctacattcgggacgggtttgggtat 187  Q
    ||||||||| ||||| |||||||||| |||||||  |||||||||||||||    
T  39422313 tctaaaaggaataatgaattgattttttacattcaagacgggtttgggtat 39422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 27088458 - 27088425
Alignment:
Q  158 attttctacattcgggacgggtttgggtatgggt 191  Q
    |||||||||||||| |||||||||||||||||||    
T  27088458 attttctacattcgagacgggtttgggtatgggt 27088425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 28569087 - 28569022
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||| |||||||  |||| ||||||||||||||  ||||||||||||| ||||  ||||||||    
T  28569087 tgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactca 28569022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 38006583 - 38006542
Alignment:
Q  150 ataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||||||| |||||| ||||||||||||| |||||||||||||    
T  38006583 ataaattaattttcaacattcgggacggatttgggtatgggt 38006542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 23045057 - 23045001
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||||||||||   |||| || |||||||||||| ||||||||||||| |||||    
T  23045057 tgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaac 23045001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 38972970 - 38973010
Alignment:
Q  212 tcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||| ||||| ||||||||||||||||||||| ||||||||    
T  38972970 tcccatacccatgttttgaaatcgggaaaaacccaaactca 38973010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 39422394 - 39422434
Alignment:
Q  212 tcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||| ||||||||||||||||||| ||||||| ||||||||    
T  39422394 tcccatacccgtgttttgaaatcgagaaaaacccaaactca 39422434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 6 - 237
Target Start/End: Complemental strand, 6388762 - 6388531
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgag 105  Q
    ||||| ||||||||||||||||||||||  |||||||| ||||  |||||||||||| |||||| | |||||| |||| | |||  ||||| ||||||||    
T  6388762 aggagaagagagaggccgagagtgtgaggcatggaaggagaaagaagagaactatgataagtgagtgtcattttaaagtctgagactctaattgtgtgag 6388663  T
Q  106 tgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggtacatatatcctagt 205  Q
    |||||| ||||||| ||| ||||||| ||||| ||||| || ||||||||||||||||||||||| ||| ||||||| | |||||||| |||||||  ||    
T  6388662 tgaaatgatttagggtttgggtttctgtttatataaaatgggtaataaattgattttctacattcaggatgggtttgagcatgggtacctatatccccgt 6388563  T
Q  206 tatccgtcccgtacccgtgttttgaaatcggg 237  Q
    || |||||  ||||||||||||| ||||||||    
T  6388562 tacccgtcttgtacccgtgttttaaaatcggg 6388531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 29918446 - 29918695
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatta 113  Q
    ||||||| ||||||||| |||||||||||| ||||| | |||||||||| || | | | |||| |||||||  |||  |||||||||||||||||||| |    
T  29918446 agagaggtcgagagtgtaagatatggaaggcgaaaagatagaactatgataactaagtgtcatctgaaagattgagactctaactgtgtgagtgaaatga 29918545  T
Q  114 tttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggta-----------tgggtacatatatcct 202  Q
    |||||| |||  |||||||||||| |||||| | ||||||||||||||| |||||| |||||||||||| |||           |||||||||||||| |    
T  29918546 tttagggtttgagtttctatttatataaaagaggtaataaattgattttttacatttgggacgggtttgtgtatggtttcggggtgggtacatatatctt 29918645  T
Q  203 agttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
     |||| |||| | ||||  |||||||||||||||||||||||||||||||    
T  29918646 tgttacccgttctgtacatgtgttttgaaatcgggaaaaactcaaactca 29918695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 36274880 - 36275058
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    |||||||| || |||||||||||||||||||| |||||  ||| ||||||| |||||| | |||| ||||||||||||  | | ||||||||||||||||    
T  36274880 agagagagacctagagtgtgagatatggaaggagaaaagggaggactatgataagtgagtgtcatctgaaagaccgagactttgactgtgtgagtgaaat 36274979  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
     |||||||  || ||||||||||||| ||||||||||| |||||||||||| ||||||||||||  |||| |||||||||    
T  36274980 gatttagg-gttgggtttctatttatataaaagggatagtaaattgattttttacattcgggacatgtttaggtatgggt 36275058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 28345323 - 28345507
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||||||| | | |||||||||||||||||| || || |||||||||||| |||||| | |||| ||||| || |||  | | |||||||||||    
T  28345323 ggagaagagagaggtcaaaagtgtgagatatggaaggagataagagagaactatgataagtgagtgtcatctgaaatactgagactatgactgtgtgagt 28345422  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||||| ||||||  ||| ||||||||||||| |||||||| ||||| ||| ||||||||||||| ||||  ||||||||||||||    
T  28345423 gaaatgatttagaatttcggtttctatttatataaaaggggtaatatatttattttctacattcaggacaagtttgggtatgggt 28345507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 8545598 - 8545421
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatta 113  Q
    |||||||  |||| |||||||||||||||| ||||| |||||| ||||| |||||| | |||||||||||||||||  |||  || | |||||||||| |    
T  8545598 agagaggttgagaatgtgagatatggaaggagaaaagagagaattatgataagtgagtgtcatttgaaagaccgagactctggctatttgagtgaaatga 8545499  T
Q  114 tttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||| ||| | ||||| ||||| |||||||  |  ||||||||||||||||||| |||||| ||||| ||||||||    
T  8545498 tttagggtttggatttctgtttatataaaaggagttgtaaattgattttctacatttgggacgagtttgagtatgggt 8545421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 30903967 - 30904063
Alignment:
Q  96 actgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggta 192  Q
    |||||||||||||||| ||||| | ||||||||||||||||| ||||| |  |||||||||||||||||||||||||||| | ||||||||||||||    
T  30903967 actgtgtgagtgaaatgatttaaggttttggtttctatttatataaaatgtgtaataaattgattttctacattcgggactgatttgggtatgggta 30904063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 5700188 - 5700372
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| |||||||||| || ||||||||||||| |||| || || |||||| ||||| |||||| | |||| | ||||||  ||  ||| ||| || ||||    
T  5700188 ggagaagagagaggcagatagtgtgagatatgaaaggagataagagagaattatgataagtgactgtcatctaaaagactaagactctgactatgggagt 5700287  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||||| ||||||  ||| |||||| |||||| |||||||| ||| ||||| ||||| ||||||||||| || |||||||||||||    
T  5700288 gaaatgatttagagtttcggtttcaatttatataaaaggggtaaaaaattaattttatacattcgggatggatttgggtatgggt 5700372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 17108299 - 17108388
Alignment:
Q  98 tgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtat 187  Q
    |||||||||||||||||||||| |||  |||||||||||| ||||| |||||||||||||||||| |||| |||||| | ||||||||||    
T  17108299 tgtgtgagtgaaattatttagggtttaagtttctatttatataaaatggataataaattgattttttacaatcgggatgagtttgggtat 17108388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 17084350 - 17084182
Alignment:
Q  22 cgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtt 121  Q
    ||||||||||| |||||||||| ||||| ||| |||||||| |||||||| |||| |||||||| ||   ||| | |||||||| | ||| |||||||      
T  17084350 cgagagtgtgaaatatggaaggagaaaagagataactatgataagtgattgtcatatgaaagactgaaactctgattgtgtgaggggaataatttagggc 17084251  T
Q  122 tttggtttctatttatctaaaagggataataaattga--ttttctacattcgggacgggtttgggtatg 188  Q
    || ||||| ||||||| ||||| ||| ||||||||||  |||| |||||||| || |||||||| ||||    
T  17084250 ttgggtttatatttatataaaaaggacaataaattgattttttttacattcgtgatgggtttggatatg 17084182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 9476180 - 9476085
Alignment:
Q  96 actgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||||||||||||| ||||||  |||   ||||||||||| || ||||| |||||| || ||||||||||||||||| ||||||||||||||||    
T  9476180 actgtgtgagtgaaataatttagagtttcaatttctatttatatataaggggtaataatttaattttctacattcgggatgggtttgggtatgggt 9476085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 252
Target Start/End: Complemental strand, 29416435 - 29416187
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgag-ta---tctaactgtg 101  Q
    ||||| |||||| |||| | ||||||||| ||| |||| ||||| ||| |||||||| |||||| | |||| |||||| | ||| ||   ||| || |||    
T  29416435 aggagaagagaggggccaaaagtgtgagacatgaaaggagaaaagagaaaactatgataagtgagtgtcatctgaaagtctgagatagactctgacggtg 29416336  T
Q  102 tgagtgaaattattt-aggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggtacatatatc 200  Q
    |||||| ||| |||| ||| ||  |||| | |||||| |||||||| ||||||||| |||||||| |||||||| ||||| |||  ||||||||||||||    
T  29416335 tgagtggaatgattttaggattagggttacaatttatataaaaggg-taataaattaattttctaaattcgggatgggttcgggg-tgggtacatatatc 29416238  T
Q  201 ctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    || |||| || |||  ||| |||||||| |||| | |||||| |||||||||    
T  29416237 ctcgttacccatcctttactcgtgtttt-aaatagagaaaaagtcaaactca 29416187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 35215531 - 35215613
Alignment:
Q  158 attttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaa 241  Q
    ||||||| ||||||||||| |||||||  ||||||| ||||| || |||| ||||| | |||||||||||||||||||||||||    
T  35215531 attttctgcattcgggacgagtttgggg-tgggtacctatatactcgttacccgtctcatacccgtgttttgaaatcgggaaaa 35215613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 5793508 - 5793598
Alignment:
Q  98 tgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |||||||||||||| ||||||| |||  |||||||||||| |||||  |||||| |||||||||| ||||||  ||||| ||||| |||||    
T  5793508 tgtgtgagtgaaatgatttagggtttgagtttctatttatataaaaatgataattaattgattttttacatttaggacgagtttgagtatg 5793598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 15173941 - 15173883
Alignment:
Q  191 tacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||||||  | ||| ||||||||||||||| |||||||||||||||||||||||||    
T  15173941 tacatatatctcatttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaac 15173883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 39379743 - 39379591
Alignment:
Q  98 tgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggta----------t 187  Q
    ||||| |||||||| ||||| | ||| | |||||||||||  | |||| ||||||||||||||| |||||||||||||| ||||| |||          |    
T  39379743 tgtgtaagtgaaatgatttaagatttggatttctatttatacagaagg-ataataaattgatttactacattcgggacgagtttgagtatgagttcgggt 39379645  T
Q  188 gggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaa 241  Q
    |||||| | ||||||  ||| |||||||||||||||||||||| ||||||||||    
T  39379644 gggtacttttatcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 39379591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 4230824 - 4230739
Alignment:
Q  158 attttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||| |||||| ||||||||||||||||||||||| ||||| |  ||||  |||||| |||| ||||||||| |||||| |||||    
T  4230824 attttttacatttgggacgggtttgggtatgggtacctatatacccgttactcgtcccatacctgtgttttgagatcggggaaaac 4230739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 12468405 - 12468309
Alignment:
Q  76 tttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgg 172  Q
    ||||| ||||||||  ||| || || |||||||||| ||||||| |||  |||||| ||||| ||||| || |||||| ||||||||||||||||||    
T  12468405 tttgatagaccgagactctgacagtatgagtgaaataatttaggatttgcgtttctctttatataaaaagggtaataagttgattttctacattcgg 12468309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 14155491 - 14155620
Alignment:
Q  134 ttatctaaaagggataataaattgattttctacattcgggacgggtttgggta-----------tgggtacatatatcctagttatccgtcccgtacccg 222  Q
    |||| |||||||| ||||||||||||||||||||||  ||| |||||||||||           ||| || ||||||||| |||| || ||   ||||||    
T  14155491 ttatataaaaggggtaataaattgattttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatcttatacccg 14155590  T
Q  223 tgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||||||||||||| ||||||||    
T  14155591 tgttttgaaatcgggaaaaacccaaactca 14155620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 249
Target Start/End: Complemental strand, 27777239 - 27777201
Alignment:
Q  211 gtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  27777239 gtcccgtacctgtgttttgaaatcgggaaaaactcaaac 27777201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 14186295 - 14186336
Alignment:
Q  150 ataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  14186295 ataaattaattttctacattcaggacgggtttgggtatgggt 14186336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 17469278 - 17469347
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    ||||||| ||||| |  |||| ||||||| ||||||||||||||||||||| ||||| ||||| ||||||    
T  17469278 tgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccagtca 17469347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 1063530 - 1063586
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||| ||||| |  |||| ||||||| |||||||||||||||||||||||||||    
T  1063530 tgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaac 1063586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 9642399 - 9642347
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    |||| ||||||| ||||||||||||||||||||| ||||| ||||| ||||||    
T  9642399 gttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccagtca 9642347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 30481547 - 30481493
Alignment:
Q  137 tctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||||||||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  30481547 tctaaaagaaatagtaaattaattttttacattcgggacgagtttgggtatgggt 30481493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 5858700 - 5858655
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||| ||||||| |||||||||||| |||||||||||||| |||||    
T  5858700 gttacccgtcccatacccgtgtttttaaatcgggaaaaacccaaac 5858655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 9476260 - 9476199
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtg 68  Q
    |||| ||||||||| |||||||||||||| ||||||  || || |||||||||||| |||||    
T  9476260 ggagaagagagaggtcgagagtgtgagatgtggaagtagataagagagaactatgataagtg 9476199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 14186368 - 14186405
Alignment:
Q  212 tcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  14186368 tcccatacccgtgttttgaaatcgagaaaaactcaaac 14186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 32392451 - 32392390
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaa 248  Q
    ||||||||||||| ||  ||||| ||||| ||| ||||||||||||||| ||||||| ||||    
T  32392451 tgggtacatatattctcattatctgtcccatactcgtgttttgaaatcgagaaaaacccaaa 32392390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 40248437 - 40248380
Alignment:
Q  186 atgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    |||||||| ||||| |  |||||||||| | ||||||||||||||||||||| |||||    
T  40248437 atgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggggaaaac 40248380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 43113691 - 43113626
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||| ||||| |  |||| ||||||| | ||||||||||||||||||||||||| ||| ||||    
T  43113691 tgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaatctca 43113626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 24189530 - 24189578
Alignment:
Q  186 atgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatc 234  Q
    |||| ||||||||||||  ||||||||| |||||||||||||| |||||    
T  24189530 atggatacatatatcctcattatccgtctcgtacccgtgttttaaaatc 24189578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 29108887 - 29108831
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||||||||| |  |||| ||||||| ||||| |||||| ||||||||||||||    
T  29108887 tgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaac 29108831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 39445617 - 39445585
Alignment:
Q  211 gtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||| |||||||||||||||||||||||||||    
T  39445617 gtcccatacccgtgttttgaaatcgggaaaaac 39445585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 13692482 - 13692718
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| | |||||| | || | |||||||   ||  ||||| |||||| |||||||    
T  13692482 agagagaggccgagagtgtgagatatggaaggagaaaagagagaactataataagtgagtgtcgtctgaaagagtaagactctaattgtgtgggtgaaat 13692581  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataat-aaattgattttctacattcgggacgggtttgggtatgggtacatatatcctagttatcc 210  Q
     ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| | |  |||||||||  ||||||| ||| ||   ||| |||    
T  13692582 gatttagggttttggtttctatttatataaaagggataataaaattgattttctacatttgtg--gggtttggg-gtgggtacctatctc--tgttttcc 13692676  T
Q  211 gtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  13692677 gtcccgtacccatgttatgaaatcgggaaaaactcaaactca 13692718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 42729200 - 42729019
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| |||||||| |||||||||||| |||||||||| || || |||||||||||| |||||  | | || |||||||| |||  ||| |||||||||||    
T  42729200 ggagaagagagagaccgagagtgtgatatatggaaggagacaagagagaactatgataagtgggtgttatctgaaagactgagactctgactgtgtgagt 42729101  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    ||||| ||||||  | |  |||||||||||| |||||||||| ||||||| ||||||||||||| | ||| |||||||||||    
T  42729100 gaaatgatttagtgtataagtttctatttatataaaagggatgataaatttattttctacattcagaacgtgtttgggtatg 42729019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 33293675 - 33293531
Alignment:
Q  108 aaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggtacatatatcctagtta 207  Q
    |||| ||||||| |||  ||||||||| || ||||| || || |||||||||||||||||||||| ||| |||||||||||||| | |||||||   |||    
T  33293675 aaatgatttagggtttgagtttctattgatataaaatgggtactaaattgattttctacattcggaacgagtttgggtatgggttcctatatccccatta 33293576  T
Q  208 tccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
     ||||||| ||||||||||||||||||||||||||| ||||||||    
T  33293575 cccgtcccatacccgtgttttgaaatcgggaaaaacccaaactca 33293531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 41477208 - 41477026
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||||||||||||||||||| ||||| ||||||| || |||||| ||||| |||||  | |||| |||||||| |||  | | ||||||||| |    
T  41477208 ggagaagagagaggccgagagtgtgaaatatgaaaggggataaaagagaattatgataagtgggtgtcatctgaaagacggagactttgactgtgtgaat 41477109  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgg 189  Q
    ||||| ||||||| |||   ||||| ||||| ||||| || ||| ||||||||||||| | ||||||||||||||||||||||    
T  41477108 gaaataatttagggtttccatttctctttatataaaaagggtaacaaattgattttctgctttcgggacgggtttgggtatgg 41477026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 36421623 - 36421779
Alignment:
Q  31 gagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttggtttc 130  Q
    |||||||| |||| ||||| |||||||||||| ||||||||  ||| |||||||  |||  ||| ||||||||| |||||| ||||||  ||   ||||     
T  36421623 gagatatgaaaggagaaaagagagaactatgataagtgattgccatctgaaagattgagactctgactgtgtgaatgaaatgatttagagttcgagtttt 36421722  T
Q  131 tatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtat 187  Q
    ||||||| ||| ||||||||||||||||||||||| ||||| |||| ||||||||||    
T  36421723 tatttatataagagggataataaattgattttctatattcgagacgagtttgggtat 36421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 25181043 - 25181218
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatta 113  Q
    |||||||||| ||||||||||||||||||| ||||| | |||| | | | |||||| | |||| ||||||||  ||  ||||||| ||||||||||||||    
T  25181043 agagaggccgggagtgtgagatatggaaggagaaaagaaagaattgtaataagtgagtatcatctgaaagacaaagactctaactatgtgagtgaaatta 25181142  T
Q  114 ttt-aggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    ||| ||  ||| ||||||||||||| || |||||||| |||||||| ||| |||| | |||||| ||||| |||||    
T  25181143 tttaagagtttaggtttctatttatatagaagggatagtaaattgactttttacaattgggacgagtttgagtatg 25181218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 256
Target Start/End: Complemental strand, 48125841 - 48125679
Alignment:
Q  105 gtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatggg-----------tac 193  Q
    ||||||| ||||||  |||  |||||||||||| |||||| | || ||||||||||||||||||||| |||| |||||||||||||           |||    
T  48125841 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcggggtggatac 48125742  T
Q  194 atatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
     |||||||| |||| |||||||||||||||||||| ||||| |||||||  ||||||||||||    
T  48125741 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcaggaaaaatccaaactcagtca 48125679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 191
Target Start/End: Original strand, 8880296 - 8880465
Alignment:
Q  22 cgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtt 121  Q
    ||||| |||||||||||||||| ||||| |||||| ||||| || | | | |||  |||||||| | |  ||||||| |||||||||||| |||||   |    
T  8880296 cgagattgtgagatatggaaggagaaaagagagaattatgataaataagtgtcaactgaaagactgcgactctaactttgtgagtgaaatgatttaaagt 8880395  T
Q  122 tttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||  ||||||||||||  ||||||| ||||||||| |||||   |||| |||||||||||||||||||||    
T  8880396 ttgagtttctatttataaaaaaggggtaataaatttatttttagcatttgggacgggtttgggtatgggt 8880465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 39219107 - 39219275
Alignment:
Q  23 gagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggttt 122  Q
    ||||||||| |||||| |||| ||||  ||| |||||||| |||||| | |||| ||||| |  |||  | | |||||||||| ||||| ||||||| ||    
T  39219107 gagagtgtgcgatatgaaaggagaaaggagataactatgataagtgagtgtcatatgaaaaaatgagactgtgactgtgtgagcgaaatgatttagggtt 39219206  T
Q  123 ttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |  |||||||||||| |||||| | ||||||||| ||||||||||||  | ||| ||||||||||||||    
T  39219207 tgagtttctatttatataaaagaggtaataaattaattttctacatttagaacgagtttgggtatgggt 39219275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 24710842 - 24710936
Alignment:
Q  158 attttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||| |||||| |||||||||||| |||||||||| ||||| |  |||| ||||||| |||||||||||||| |||||| ||||| || |||||    
T  24710842 attttttacatttgggacgggtttgagtatgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatactca 24710936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 5293659 - 5293490
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatta 113  Q
    ||||||| ||||| |||||||||||||| |  |||| |||||||||| | |||||  | ||| | ||||| | |||  |||  |||||||| ||||||      
T  5293659 agagaggtcgagattgtgagatatggaatgaaaaaagagagaactatcataagtgtctgtcaatcgaaagtctgagactctggctgtgtgattgaaatag 5293560  T
Q  114 tttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgg 183  Q
    ||| |  |||  |||||||||||| |||||| ||||||||||||| |||| |||||||||||| ||||||    
T  5293559 ttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 5293490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 25155074 - 25154906
Alignment:
Q  16 agaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatt 115  Q
    |||| ||||||||||||||| || |||| ||||| |||||||||||| |||||| | |||| | || |||||||  ||| || |||  |||||||| |||    
T  25155074 agagaccgagagtgtgagatttgaaaggagaaaaaagagaactatgataagtgagtgtcatctaaatgaccgagactctcacagtgatagtgaaataatt 25154975  T
Q  116 taggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttggg 184  Q
    || | ||| | ||||  |||   |||||||| || | ||||||||||||| |||| |||||||||||||    
T  25154974 taaggtttggatttccctttgaataaaaggggtagtgaattgattttctaaattcaggacgggtttggg 25154906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 14902973 - 14903028
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatga 62  Q
    |||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  14902973 ggagaagagagaggccgagattgtgagatatggaaggagaaaagagagaactatga 14903028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 16903369 - 16903537
Alignment:
Q  22 cgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtt 121  Q
    ||||||||||| |||||||||| ||||| |||||||||||| |||||||| ||      ||||| ||   ||| | |||||||||||||| ||||||| |    
T  16903369 cgagagtgtgaaatatggaaggagaaaagagagaactatgataagtgattgtc------aagactgaaactctgattgtgtgagtgaaataatttagggt 16903462  T
Q  122 tttggtttctatttatctaaaagggataataaattga--------ttttctacattcgggacgggtttgggtatg 188  Q
    ||  |||| ||||||| ||||| ||  ||||||||||        |||| |||||||||||||||||||||||||    
T  16903463 ttgagtttatatttatataaaaagggcaataaattgattttttttttttttacattcgggacgggtttgggtatg 16903537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 35936922 - 35936829
Alignment:
Q  158 attttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||||  ||||||||||||  ||||||| ||||| |  |||||||||||| ||| |||| |||||||||||| ||||| ||||||||    
T  35936922 attttctacattcatgacgggtttgggg-tgggtacctatatacccgttatccgtcccatactcgtgatttgaaatcggggaaaacccaaactca 35936829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 39616287 - 39616381
Alignment:
Q  158 attttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||| |||||| ||||||||| ||||||||||| | ||||| || |||| ||||||  ||||||||||||||||| ||| ||||| || |||||    
T  39616287 attttttacatttgggacgggtatgggtatgggtgcctatatacttgttacccgtcctatacccgtgttttgaaataggggaaaacccatactca 39616381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 43513189 - 43513104
Alignment:
Q  103 gagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    ||||||||||||||||| |||  |||||||||||| ||||| |  | ||||||||||||| ||||||||  ||||||||| |||||    
T  43513189 gagtgaaattatttagggtttgagtttctatttatataaaaagagttataaattgattttttacattcgaaacgggtttgagtatg 43513104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 10778615 - 10778567
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  10778615 gttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactca 10778567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 13798198 - 13798327
Alignment:
Q  134 ttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg-----------ggtacatatatcctagttatccgtcccgtacccg 222  Q
    |||| |||||||| ||||||||||||||||||||||  ||| |||||| ||||||           | || ||||||||| |||| || || | ||||||    
T  13798198 ttatataaaaggggtaataaattgattttctacatttaggatgggtttaggtatgaatttggggtggataaatatatcctcgttacccatctcatacccg 13798297  T
Q  223 tgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||||||||||||| ||||||||    
T  13798298 tgttttgaaatcgggaaaaacccaaactca 13798327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 19003757 - 19003675
Alignment:
Q  160 tttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||||||||||  |||||||||  ||| |||||||||||  |||||||||||| ||||||| ||||| ||||||| |||||    
T  19003757 tttctacattcgggtagggtttgggg-tggatacatatatccccgttatccgtcccatacccgtattttgtaatcggggaaaac 19003675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 16237366 - 16237308
Alignment:
Q  190 gtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaa 248  Q
    ||||||||||||| |||| ||||||| ||||||| ||||||||||||| ||||| ||||    
T  16237366 gtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaaa 16237308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 14890995 - 14891048
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactat 60  Q
    |||| ||||||||| ||||| |||||||||||||||| ||||| ||||||||||    
T  14890995 ggagaagagagaggtcgagattgtgagatatggaaggagaaaagagagaactat 14891048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 34085259 - 34085324
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||| ||  |||| || |||| ||| ||||||||||||||||||||||| ||||||||    
T  34085259 tgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaaactca 34085324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 35069954 - 35069889
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||||||  |||| |||||  |||||||| || |||||||||| ||||||||||||||    
T  35069954 tgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaactcaaactca 35069889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 47645019 - 47644946
Alignment:
Q  103 gagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacg 176  Q
    ||||||||| ||||||| | |  |||||||||||| ||||||||||||||||||  | || |||||||||||||    
T  47645019 gagtgaaatgatttaggatctgagtttctatttatataaaagggataataaattattattttacattcgggacg 47644946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 51421882 - 51421938
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||||||||| |  |||| ||||||| |||||||||||||| ||||||||||||    
T  51421882 tgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaac 51421938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 5283726 - 5283668
Alignment:
Q  130 ctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    ||||||||  ||||||||| |||||||||||||||||| ||  ||||||||| ||||||    
T  5283726 ctatttatacaaaagggatgataaattgattttctacaatccagacgggtttaggtatg 5283668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 188
Target Start/End: Complemental strand, 29871390 - 29871360
Alignment:
Q  158 attttctacattcgggacgggtttgggtatg 188  Q
    |||||||||||||||||||||||||||||||    
T  29871390 attttctacattcgggacgggtttgggtatg 29871360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 36617384 - 36617450
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtg-ttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||| ||||| || ||||| |||||||||||| || ||||||||||| | ||||||||||||||    
T  36617384 tgggtacctatattctcgttattcgtcccgtacccatgtttttgaaatcgtggaaaactcaaactca 36617450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 5293470 - 5293421
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgg 236  Q
    |||||||||||||||  ||||||||||| ||||| || ||||||||||||    
T  5293470 tgggtacatatatccctgttatccgtcctgtaccagtattttgaaatcgg 5293421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 16433215 - 16433170
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||| ||||||| ||||||||||||||||||||  |||||||||||    
T  16433215 gttacccgtcccatacccgtgttttgaaatcggagaaaactcaaac 16433170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 41477017 - 41476952
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||||||  |||||||||||||||| ||| ||||  |||||  |||||| ||||||||    
T  41477017 tgggtacatatatccacgttatccgtcccgtactcgtattttccaatcgaaaaaaacccaaactca 41476952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 12494995 - 12495027
Alignment:
Q  159 ttttctacattcgggacgggtttgggtatgggt 191  Q
    ||||||||||| |||||||||||||||||||||    
T  12494995 ttttctacatttgggacgggtttgggtatgggt 12495027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 19572553 - 19572521
Alignment:
Q  211 gtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||| |||||||||||||||||||||||||||    
T  19572553 gtcccatacccgtgttttgaaatcgggaaaaac 19572521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 23719525 - 23719616
Alignment:
Q  96 actgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    ||||||| |||||||| |||||   |||  |||||||||||| ||||| || || |||||||| ||| ||||||||||||| ||||| |||||    
T  23719525 actgtgttagtgaaatgatttatagtttgagtttctatttatataaaaagggtagtaaattga-tttgtacattcgggacgagtttgagtatg 23719616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 25154869 - 25154837
Alignment:
Q  210 cgtcccgtacccgtgttttgaaatcgggaaaaa 242  Q
    |||||||||| ||||||||||||||||||||||    
T  25154869 cgtcccgtactcgtgttttgaaatcgggaaaaa 25154837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 42707885 - 42707837
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||| ||||||| ||||||||||||||||||||  |||||||| |||||    
T  42707885 gttacccgtcccatacccgtgttttgaaatcggagaaaactcatactca 42707837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 47644907 - 47644863
Alignment:
Q  205 ttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||||||||||||| ||||||||| |||||| ||||| |||||    
T  47644907 ttatccgtcccgtacctgtgttttgagatcggggaaaacccaaac 47644863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 48576282 - 48576206
Alignment:
Q  99 gtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggac 175  Q
    |||| |||||||| ||||||| |||  | || |||||||  |||| |||| ||||||||||||||| ||||||||||    
T  48576282 gtgtaagtgaaatgatttagggtttgagattttatttatacaaaaaggattataaattgattttcttcattcgggac 48576206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 49098330 - 49098366
Alignment:
Q  213 cccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  49098330 cccgtacccgtattttgaaatcggaaaaaactcaaac 49098366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 49741111 - 49741079
Alignment:
Q  159 ttttctacattcgggacgggtttgggtatgggt 191  Q
    |||||| ||||||||||||||||||||||||||    
T  49741111 ttttctgcattcgggacgggtttgggtatgggt 49741079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 6e-43; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 9402421 - 9402605
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||||||||||| | |||||||||||||||| ||||| |||||||||||| |||||| | | || ||||||||| ||  ||| |||||||||||    
T  9402421 ggagaagagagaggccgaaaatgtgagatatggaaggagaaaagagagaactatgataagtgagtgtgatatgaaagacctagactctgactgtgtgagt 9402520  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||||| ||||||| ||| ||||||||||||| |||| ||| || ||||||||||||||||||||| ||| |||||| ||||||||    
T  9402521 gaaatgatttagggtttgggtttctatttatataaatggggtactaaattgattttctacattcgagacaggtttgagtatgggt 9402605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 34346271 - 34346081
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgag 105  Q
    ||||| ||| ||||||||||| |||||||||||||||  ||||| | |||||||||| |||||| |||||| | |||||| |||  ||| ||||||||||    
T  34346271 aggagaagaaagaggccgagaatgtgagatatggaagaagaaaagatagaactatgataagtgactctcatctaaaagactgagactctgactgtgtgag 34346172  T
Q  106 tgaaattatttaggtttttggtttctat---------ttatctaaaagggataataaattgattttctacattcgggacgggtttgggtat 187  Q
    |||||| ||||||| ||| |||||||||         |||| |||||||  ||||||||| ||||||||||||||| |||| |||||||||    
T  34346171 tgaaatgatttagggtttgggtttctatttatataatttatataaaaggagtaataaattaattttctacattcggaacggatttgggtat 34346081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 8321034 - 8320867
Alignment:
Q  24 agagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttt 123  Q
    ||||||||||||||||| |  ||||||||| |||||||| |||||| | || | ||||||||||||  ||| ||||||| |||||||| ||||||| |||    
T  8321034 agagtgtgagatatggacgaagaaaatagataactatgataagtgaatgtcgtctgaaagaccgagactctgactgtgtaagtgaaatgatttagggttt 8320935  T
Q  124 tggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
      |||||||||||  |||| ||  |||||| |||||||| | ||||| | |||||| |||||||||||    
T  8320934 aagtttctatttacgtaaatggagtaataagttgattttttgcattcagaacgggtctgggtatgggt 8320867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 1948042 - 1947863
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    ||||||||| | ||| ||||||||||| |||  ||||| || ||||||||| |||||| | |||| |||||| | ||   ||| |||||||||||  |||    
T  1948042 agagagaggtcaagattgtgagatatgaaagtagaaaagagggaactatgataagtgagtgtcatctgaaagtcagatactctgactgtgtgagtataat 1947943  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
     | ||||| ||| | ||| ||||||| |||||||| |||||||||||||||||||||| || ||| ||||| ||||||||    
T  1947942 gacttagggtttggatttttatttatataaaaggggtaataaattgattttctacatttggaacgagtttgagtatgggt 1947863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 13768948 - 13769088
Alignment:
Q  51 agagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataa 150  Q
    |||||||| ||| |||||| | |||| ||| |||  ||| |||| ||||||| | |||||| ||||| | |||  ||||| |||||| |||||||  |||    
T  13768948 agagaactctgagaagtgagtgtcatatgagagatggagaatctgactgtgttactgaaataatttatggtttgagtttcaatttatataaaaggagtaa 13769047  T
Q  151 taaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  13769048 taaattgattttctacattcaggacgggtttggatatgggt 13769088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 2126870 - 2126699
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatta 113  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||||||| || ||| | | || | ||| ||||||  | ||||| ||| |||||||| |    
T  2126870 agagaggccaagagtgtgagatatggaaggagaaaagagagaactatgataactgagtgtgatctaaaataccgagactttaactctgtaagtgaaatga 2126771  T
Q  114 tttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggt 185  Q
    ||||    ||  |||||||| ||| |||||||| ||||||| | ||||||| |||||| || || |||||||    
T  2126770 tttaaagcttgagtttctatctatataaaaggggtaataaacttattttcttcattcgagatggatttgggt 2126699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 188
Target Start/End: Original strand, 29341131 - 29341269
Alignment:
Q  55 aactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttggtttctatttatctaaa--agggataata 152  Q
    |||||||| |||||||| |||| |||||||  ||| |||| ||||| | |||||||| || |||| ||| ||||||||||||| || |  |||| ||| |    
T  29341131 aactatgataagtgattgtcatctgaaagattgagaatctgactgtataagtgaaatgatatagggtttgggtttctatttatatagataaggggtaaaa 29341230  T
Q  153 aat---tgattttctacattcgggacgggtttgggtatg 188  Q
    ||    |||||||||||||||||||||||||||||||||    
T  29341231 aaaaaatgattttctacattcgggacgggtttgggtatg 29341269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 9458686 - 9458751
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||||||  |||||| ||||||||||||| ||||||||| ||| ||| ||||||||||    
T  9458686 tgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactca 9458751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 18908916 - 18908981
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||||||| |||| ||||||| || |||| ||||||||||||| ||||| ||||||||    
T  18908916 tgggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaactca 18908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 14321717 - 14321876
Alignment:
Q  23 gagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgag--tatctaactgtgtgagtgaaattatttaggt 120  Q
    |||||||||||||||| |||| ||||| |||||| ||||| |||||||| |||| | ||||| ||||  | | | ||   ||||||||||| ||||| |     
T  14321717 gagagtgtgagatatgaaaggagaaaa-agagaattatgataagtgattgtcatcttaaagaacgagactttgtcac---gtgagtgaaatgatttaaga 14321812  T
Q  121 ttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttggg 184  Q
    |||  |||||||||||| |||||  | ||||||||| |||||||||||||  ||| ||||||||    
T  14321813 tttgagtttctatttatataaaataggtaataaattaattttctacattcatgacaggtttggg 14321876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 28079761 - 28079699
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||| |||||||  |||| ||||||||||||| ||||||||||||||| ||||| |||||    
T  28079761 tgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaac 28079699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 29340751 - 29340805
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactat 60  Q
    ||||| ||| |||||||||||||||||||||| ||||| ||||| ||||||||||    
T  29340751 aggagaagaaagaggccgagagtgtgagatatcgaaggagaaaagagagaactat 29340805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 252
Target Start/End: Original strand, 20348916 - 20349152
Alignment:
Q  26 agtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttg 125  Q
    |||||||||||||||||| ||||| |||||||||||| |||| | | |||| |||||| || ||  ||| |  ||||||||||| | ||||||| |||      
T  20348916 agtgtgagatatggaaggagaaaagagagaactatgataagtaagtgtcatctgaaagtccaagactctga--gtgtgagtgaagtgatttagggtttga 20349013  T
Q  126 gtttcta-tttatctaaaagggataataaattgattttctacattcgggacgggtttgggta-----------tgggtacatatatcctagttatccgtc 213  Q
    |||| || ||||| ||||| |  ||||||||| ||||| |||||| |  |||| ||||||||           ||||||| |||||||  ||||  ||||    
T  20349014 gtttatattttatataaaaagtgtaataaattaattttttacatttgcaacggatttgggtatgagttcggggtgggtacctatatccccgttactcgtc 20349113  T
Q  214 ccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    || ||||||||||||||||||||| ||||  ||||||||    
T  20349114 ccatacccgtgttttgaaatcggggaaaatccaaactca 20349152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 256616 - 256564
Alignment:
Q  139 taaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||||| || |||||||||||||||||||  ||| ||||||||||||||||    
T  256616 taaaaggggtagtaaattgattttctacatttaggaggggtttgggtatgggt 256564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 256535 - 256492
Alignment:
Q  209 ccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||||    
T  256535 ccgtctcgtacccatgttttgaaatcggggaaaactcaaactca 256492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 29199946 - 29199895
Alignment:
Q  191 tacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaa 242  Q
    |||||||||||  |||| ||||||||||||||| ||||||||||||| ||||    
T  29199946 tacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaa 29199895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 34178394 - 34178347
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatc 234  Q
    ||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  34178394 tgggtacctatatccttgttacccgtctcgtacccgtgttttgaaatc 34178347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 372946 - 372857
Alignment:
Q  98 tgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |||||| ||||||| ||||||| ||| | ||||||||||| ||||| ||||||||| |||| ||| |||||||  || | |||||||||||    
T  372946 tgtgtgtgtgaaatgatttaggatttagatttctatttatataaaa-ggataataagttgactttttacattcatgatgagtttgggtatg 372857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 14410920 - 14410858
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||| ||||| |  |||| ||||||| |||||||||||||||||| || |||||||||||    
T  14410920 tgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaac 14410858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 29342168 - 29342114
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactat 60  Q
    ||||| ||| ||||||||||||||||||||||  |||| ||||| ||||||||||    
T  29342168 aggagaagaaagaggccgagagtgtgagatatcaaaggagaaaagagagaactat 29342114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 7978628 - 7978595
Alignment:
Q  210 cgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    |||||||||||||| |||||||||||||||||||    
T  7978628 cgtcccgtacccgtattttgaaatcgggaaaaac 7978595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 9442470 - 9442507
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaa 241  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  9442470 gttacccgtcccatacccgtgttttgaaatcgggaaaa 9442507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 14506109 - 14506178
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    ||||||| || || || |||| ||||||| |||| |||||||||||||||| ||||| ||||| ||||||    
T  14506109 tgggtacctaaatacttgttacccgtcccatacctgtgttttgaaatcggggaaaacccaaacccagtca 14506178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 24221453 - 24221510
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtga 69  Q
    |||||||||| ||||||||||| ||||||| | ||||| ||||||||| || ||||||    
T  24221453 agagagaggctgagagtgtgagctatggaacgagaaaagagagaactacgataagtga 24221510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 27738795 - 27738851
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    |||||||||||||    |||| ||||||| ||||||||||||||||||||| |||||    
T  27738795 tgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaac 27738851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 33616367 - 33616187
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    ||||| ||||||||||||||||||||||| || ||||| |||||||||||| |||||| | |||| ||||| |   ||  ||| ||||||||||||||||    
T  33616367 agagaaaggccgagagtgtgagatatggatggagaaaagagagaactatgataagtgagtgtcatatgaaatattaagactctgactgtgtgagtgaaat 33616268  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggta 192  Q
     ||||||| ||||| ||| ||||||| |||||||| ||||||||||||||||||||||| || | ||||| ||||||||||    
T  33616267 gatttagggttttgatttttatttatataaaaggggtaataaattgattttctacattcagggcaggttttggtatgggta 33616187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 42907734 - 42907907
Alignment:
Q  16 agaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatt 115  Q
    ||||||| |||||||||||||||||||| ||||| | |||||||||| |||||  | |||| ||||||||  ||  ||||||||| |||||||||| |||    
T  42907734 agaggccaagagtgtgagatatggaaggagaaaagatagaactatgataagtgtgtgtcatctgaaagactaagactctaactgtatgagtgaaatgatt 42907833  T
Q  116 taggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatggg 190  Q
    |||| |||  |||||||||||| |||||| | || |||||||||||||||||||||||||| |||||||||||||    
T  42907834 tagggtttgagtttctatttatataaaagag-tagtaaattgattttctacattcgggacgagtttgggtatggg 42907907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 7334433 - 7334208
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatta 113  Q
    ||||||||||||| |||||||||||||||| ||||| |||||| ||||| || | | | |||  | |||||| |||  | |||||||||||||||||| |    
T  7334433 agagaggccgagattgtgagatatggaaggagaaaagagagaattatgataaataaatgtcaactaaaagactgagactttaactgtgtgagtgaaatga 7334334  T
Q  114 tttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtc 213  Q
    |||||  |||  ||||||||||||  ||||  |||||||||||||||||| ||||| |||||| |||||| ||||| ||| |||||||   |||||||||    
T  7334333 tttagagtttgagtttctatttat--aaaaacgataataaattgattttcaacatttgggacgagtttggatatggttacctatatccccattatccgtc 7334236  T
Q  214 ccgtacccgtgttttgaaatcgggaaaaa 242  Q
    ||||| |||||||||||||||||| ||||    
T  7334235 ccgta-ccgtgttttgaaatcggggaaaa 7334208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 36918961 - 36919145
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgag 105  Q
    ||||| |||||||||||||||||||||   ||| |||| ||||| |||||| |||||||||||  | |||| |||||| | |||  |||| |||||||||    
T  36918961 aggagaagagagaggccgagagtgtgacgcatgtaaggagaaaaaagagaaatatgacaagtggatgtcatctgaaagtctgagactcta-ctgtgtgag 36919059  T
Q  106 tgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||| ||||||  |||  |||||||||||| |||||| | ||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  36919060 tgaaatgatttagagtttgagtttctatttatataaaagtggtaataaactgattttctacatccggaacgagtttgggtatgggt 36919145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 8844042 - 8843880
Alignment:
Q  26 agtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttg 125  Q
    ||||||||  |||||||| ||||| |||||||||||| |||||| | |||| |||||| |  ||  | | |||||||||||||||| ||||||| |||      
T  8844042 agtgtgaggcatggaaggagaaaagagagaactatgataagtgagtgtcatctgaaagtctaagactgtgactgtgtgagtgaaatgatttaggatttaa 8843943  T
Q  126 gtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |||||||||||| | |||||| ||||||||| |||||||||||||  ||||||||||||||||    
T  8843942 gtttctatttatatgaaaggggtaataaattaattttctacattcacgacgggtttgggtatg 8843880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 8857006 - 8856844
Alignment:
Q  26 agtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttg 125  Q
    ||||||||  |||||||| ||||| |||||||||||| |||||| | |||| |||||| |  ||  | | |||||||||||||||| ||||||| |||      
T  8857006 agtgtgaggcatggaaggagaaaagagagaactatgataagtgagtgtcatctgaaagtctaagactgtgactgtgtgagtgaaatgatttaggatttaa 8856907  T
Q  126 gtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |||||||||||| | |||||| ||||||||| |||||||||||||  ||||||||||||||||    
T  8856906 gtttctatttatatgaaaggggtaataaattaattttctacattcacgacgggtttgggtatg 8856844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 12075888 - 12075632
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||| |||| ||||||||||||||||| ||||| ||||| |||||||||| | |||||  | |||| | ||| || ||   |||||||||||| ||    
T  12075888 ggagaagacagagaccgagagtgtgagatatagaaggagaaaagagagaactataataagtggatgtcatctaaaaaactgaaactctaactgtgtgggt 12075789  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggta-----------tgggtacat 195  Q
    ||||| ||| ||  |||| |||||||||||| ||||| || ||||||||||||||||||||||| ||||| ||||| |||           |||||||||    
T  12075788 gaaatgattcagagttttagtttctatttatataaaatgggtaataaattgattttctacattccggacgagtttgagtacgagtttggggtgggtacat 12075689  T
Q  196 atatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    || |||   ||| | ||| ||||||||||||||||||| || |||||||||||||||    
T  12075688 atctccctattacctgtcacgtacccgtgttttgaaattggaaaaaactcaaactca 12075632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 21714232 - 21714051
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||| ||| ||||| ||||||||| | || | ||||| |||||||||||| |||||| | |||||||| |||| |||  ||||| ||||| |||    
T  21714232 ggagaagagaaaggtcgagaatgtgagatacgaaaagagaaaagagagaactatgagaagtgagtgtcatttgagagactgagactctaattgtgtaagt 21714133  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    ||||| ||||||| |||  |||||||||||| |||||| | ||||||||| |||||||||||| | |||| |||| ||||||    
T  21714132 gaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttgagacgagtttaggtatg 21714051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 33516313 - 33516149
Alignment:
Q  24 agagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactg-tgtgagtgaaattatttaggttt 122  Q
    ||||||||| |||| ||||| ||||| |||||| ||||| |||||| | |||| ||||||||| ||  |||||| | |||||||||||| ||||||| ||    
T  33516313 agagtgtgatatatagaaggagaaaagagagaattatgataagtgagtgtcatctgaaagaccaagactctaacgggtgtgagtgaaatgatttagggtt 33516214  T
Q  123 ttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtat 187  Q
    |  |||| ||||||| |||||||| ||||| ||||||||| |||||| | |||||||||||||||    
T  33516213 tgagtttttatttatataaaaggggtaatacattgattttttacatttgagacgggtttgggtat 33516149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 37926408 - 37926581
Alignment:
Q  16 agaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatt 115  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||| |||||| | |||  | |||||| |||  | ||||||||||||| |||| |||    
T  37926408 agaggtcgagagtgtgagatatggaaggagaaaatagagaactatgataagtgactgtca--tcaaagactgagactttaactgtgtgagttaaatgatt 37926505  T
Q  116 taggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||   |||  ||||| ||| || | |||||||||||||||| |||| |||||||| ||| | ||||||||||||||    
T  37926506 taaagtttgagtttcaattgatatgaaagggataataaattaatttactacattcaggatgagtttgggtatgggt 37926581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 36306623 - 36306798
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||||||||||||||||| ||||| |||| | || || ||  || ||||| ||  || | |||| | |||||| |||  ||||| ||||| |||    
T  36306623 ggagaagagagaggccgagagtgttagataaggaaagagataagagttaaatatgataaccgagtgtcatctcaaagactgagactctaattgtgtaagt 36306722  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttg 182  Q
    ||||| ||||| | ||| | ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  36306723 gaaatgatttatgatttcgatttctatttatataaaaggggtaataaattgattttctacattcgggacgggtttg 36306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 21957051 - 21956887
Alignment:
Q  26 agtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttg 125  Q
    |||||||||||||||||| ||||| | | |||||||| || ||| | |||| | |||||| ||   ||| |||||| || |||||| ||||||| ||| |    
T  21957051 agtgtgagatatggaaggagaaaagatataactatgataaatgagtgtcatctaaaagactgacactctgactgtgcgaatgaaatgatttagggtttgg 21956952  T
Q  126 gtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||| ||||||| |||||||| ||||||||||||||||||||||||  ||| ||||||||||||||    
T  21956951 gtttttatttatataaaaggg-taataaattgattttctacattcgtaacgagtttgggtatgggt 21956887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 25940978 - 25941160
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||||| ||||||||||| |||| ||||||| |||||||||  ||||||| |||||| | |||| ||||||||  ||  | | |  ||||||||    
T  25940978 ggagaagagagaagccgagagtgtaagatttggaaggagaaaataga--actatgataagtgaatgtcatctgaaagactaagactatgatcgtgtgagt 25941075  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||| | |||||||  || ||||||||||||| |||||||| | ||||||||||||||||||| || |||  ||||||||||||||    
T  25941076 gaattgatttaggccttgggtttctatttatataaaaggggttataaattgattttctacatccgagacatgtttgggtatgggt 25941160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 171
Target Start/End: Complemental strand, 17113259 - 17113096
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| |||||| ||| |||||||||||||||||||||  |||| ||| |||||||| |||||| | |||| |||||||| |||  ||| ||| || ||||    
T  17113259 ggagaagagaggggctgagagtgtgagatatggaaggaaaaaagagataactatgataagtgagtgtcatctgaaagactgagactctgactttgggagt 17113160  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcg 171  Q
    ||||| ||||| | ||| ||||| ||||||| | |||| | ||||||||||||||||||||||||    
T  17113159 gaaatgatttaagatttgggtttttatttatatgaaagag-taataaattgattttctacattcg 17113096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 25265394 - 25265240
Alignment:
Q  16 agaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatt 115  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||| ||| || | |||| ||||| |  |||  ||| | ||||||||| |||| |||    
T  25265394 agaggccgaaagtgtgagatatggaaggagaaaagagagaactatgataagcgactgtcatctgaaaaattgagactctgattgtgtgagtaaaatgatt 25265295  T
Q  116 taggtttttggtttctatttatctaaaagggataataaattgattttctacattcg 171  Q
    |||  |||  |||||||||||| || || |||||||||||||||||||||||||||    
T  25265294 tagaatttgagtttctatttatatagaa-ggataataaattgattttctacattcg 25265240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 9929419 - 9929245
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    |||||| |||||| ||||||||| || ||| | || || |||||||||||| |||||||| | || | ||||||||||  ||| ||||||||||||||||    
T  9929419 agagaggggccgatagtgtgagagattgaatgagataagagagaactatgataagtgattgttatctaaaagaccgagactctgactgtgtgagtgaaat 9929320  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggta 186  Q
    |||||||  |||  |||| ||||||| |  ||| | ||||||||||||||||||| ||| |||||  ||||||||    
T  9929319 tatttagagtttcagtttatatttatatggaagaggtaataaattgattttctactttcaggacgattttgggta 9929245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 41915089 - 41914997
Alignment:
Q  160 tttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||| |  ||||||||||||||||||||||||||  |||| || |||||||||| | ||||||||||||| ||||| ||||||||    
T  41915089 tttctacattcgtgtagggtttgggtatgggtacatatatccccgttacccttcccgtacccatattttgaaatcggggaaaacccaaactca 41914997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 30034525 - 30034688
Alignment:
Q  20 gccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttagg 119  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||| ||| || | ||| ||||||||  | |  ||| ||| | |||||||||| |||||||    
T  30034525 gccgaaagtgtgagatatggaaggagaaaagagaaaactatgataagcgagtgtcacttgaaagattgtgactctcactttatgagtgaaatgatttagg 30034624  T
Q  120 tttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgg 183  Q
     ||| ||||||||||||| |||| | | || ||||||||||||  ||||||| ||||| |||||    
T  30034625 gtttgggtttctatttatataaatgaggtagtaaattgatttttaacattcgagacggatttgg 30034688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 40420741 - 40420662
Alignment:
Q  108 aaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtat 187  Q
    |||| |||| || ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||  ||||||||||||    
T  40420741 aaatgatttggggttttggtttctatttatataaaaggggtaataaagtgattttctacattcggggtgggtttgggtat 40420662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 35304764 - 35304611
Alignment:
Q  16 agaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatt 115  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  || |||||||  |||  |||||||| |||  ||   || |||| ||||||| |||    
T  35304764 agaggccgagagtgtgagatatggaaggagaaaaaagagaactgcgataagtgatcatcacctgaaagactgagactccggctctgtgggtgaaatgatt 35304665  T
Q  116 taggtttttggtttctatttatctaaaagggataataaattgattttctacattc 170  Q
    |||  |||  |||||| ||||| |||||||| |||||||||||||| ||||||||    
T  35304664 tagagtttgagtttctttttatataaaaggg-taataaattgatttcctacattc 35304611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 9281130 - 9280965
Alignment:
Q  23 gagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggttt 122  Q
    ||||||||||||||||||||| ||||| |||| ||||||| |||||| | | || |||||||  |||  ||||| | ||| | || ||| ||||||| ||    
T  9281130 gagagtgtgagatatggaaggagaaaagagagtactatgataagtgaatgttatctgaaagattgagactctaattttgtcaatgtaatgatttagggtt 9281031  T
Q  123 ttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |   ||||||| ||| |||||||||||||||||| |||||||| |||| ||||  ||||| |||||    
T  9281030 tgaatttctatctatataaaagggataataaatttattttctatattcaggacaagtttgagtatg 9280965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 37384198 - 37384294
Alignment:
Q  94 taactgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||| ||||||||||||| ||||||| |||    |||||||||| |||||||||||||||||||| |||||| ||| |||||||||||| ||||||||    
T  37384198 taaccgtgtgagtgaaatgatttagggtttgaacttctatttatataaaagggataataaattga-tttctatatttgggacgggtttgtgtatgggt 37384294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 50376507 - 50376425
Alignment:
Q  108 aaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatggg 190  Q
    |||| ||||||  |||| |||||||||||| ||||| ||| |||||||||||||||||||||||| ||||||| |||| ||||    
T  50376507 aaataatttagcgttttagtttctatttatataaaatggaaaataaattgattttctacattcggaacgggttcgggtgtggg 50376425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 39086007 - 39086152
Alignment:
Q  23 gagagtgtgagatatggaaggggaaaataga---gaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttagg 119  Q
    ||||||||||| ||||||||| ||||| | |   ||||||||| |||| | | |||| ||||| || |||  ||| |||||||||||||||| |||||||    
T  39086007 gagagtgtgagctatggaaggagaaaaaaaaaaagaactatgataagtaagtgtcatctgaaaaactgagagtctgactgtgtgagtgaaatgatttagg 39086106  T
Q  120 tttttggtttctatttatctaaaagggataataaattgattttctac 166  Q
     |||  |||||||||||| ||||| || || ||||||||||||||||    
T  39086107 gtttaagtttctatttatataaaaagg-tagtaaattgattttctac 39086152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 3737804 - 3737861
Alignment:
Q  186 atgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||||||||| ||| |||| ||||||| ||||||||||||||||| |||||||||    
T  3737804 atgggtacatataacctcgttacccgtcccatacccgtgttttgaaattgggaaaaac 3737861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 256
Target Start/End: Complemental strand, 25299089 - 25298830
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||||| | ||||| |||||||||||||||| ||||| ||| || ||||| || | | | |||  |||||||  | |  ||||||  | |||||    
T  25299089 ggagaagagagaagtcgagattgtgagatatggaaggagaaaagagaaaattatgataaataagtgtcaactgaaagattgcgactctaacgttatgagt 25298990  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt---------aca--t 195  Q
    ||||| ||||||  |||  ||| ||||||||  ||||||| | |||||||||||||| ||||| || ||||||||||||||||||         |||  |    
T  25298989 gaaatgatttagagtttgagtt-ctatttataaaaaaggggtgataaattgattttcaacatttggtacgggtttgggtatgggttcggggtggacagct 25298891  T
Q  196 atatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    ||||||   ||| || ||||||||||||||||||||||| |||||||| ||||| ||||||    
T  25298890 atatccccattacccatcccgtacccgtgttttgaaatccggaaaaacccaaacccagtca 25298830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 43309512 - 43309577
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||| ||||||| ||  |||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  43309512 tgggcacatataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactca 43309577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 252
Target Start/End: Complemental strand, 4741366 - 4741217
Alignment:
Q  113 atttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggta-----------tgggtacatatatcc 201  Q
    ||||||| |||  |||||||||||| ||||| |||||||||||||| ||| ||||||||| ||||||||  |||           ||||||| |||||||    
T  4741366 atttagggtttgagtttctatttatataaaatggataataaattga-tttatacattcggaacgggtttttgtatgggttcggggtgggtacttatatcc 4741268  T
Q  202 tagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
      |||||||||||| ||||| |||||| |||||| | ||||||||||||||    
T  4741267 ctgttatccgtcccatacccatgttttaaaatcgaggaaaactcaaactca 4741217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 12825510 - 12825458
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    |||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  12825510 gttacccgtcccatacccgtgttttgaaatcggggaaaacccaaactcagtca 12825458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 24474579 - 24474524
Alignment:
Q  126 gtttctatttatctaaaagggataataaattgattttctacattcgggacgggttt 181  Q
    |||||||||||| |||||||||||| || |||||||| ||||||||||||| ||||    
T  24474579 gtttctatttatataaaagggataaaaatttgattttttacattcgggacgagttt 24474524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 12505668 - 12505606
Alignment:
Q  126 gtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |||||||||||| ||||||||  ||||||||||| || ||| ||| |||||||||||||||||    
T  12505668 gtttctatttatataaaaggggaaataaattgatgttttaccttcaggacgggtttgggtatg 12505606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 249
Target Start/End: Original strand, 25941191 - 25941229
Alignment:
Q  211 gtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  25941191 gtcccgtacccgtgttttgaaatcgggaaaaacccaaac 25941229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 29527841 - 29527903
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||||||||||||  |||| ||||| ||||||||| ||||||||||||| ||||| |||||    
T  29527841 tgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaac 29527903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 43553371 - 43553458
Alignment:
Q  99 gtgtgagtgaaattatttaggttt-ttggtttctatttatc----taaaagggataataaattgattttctacattcgggacgggttt 181  Q
    ||||||||||||| ||||||||||   | ||||||||||||    |||||||| |||||||||||||||| |||||||||||| ||||    
T  43553371 gtgtgagtgaaatgatttaggtttagagttttctatttatctatataaaaggggtaataaattgattttcaacattcgggacgagttt 43553458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 31415997 - 31415948
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgg 236  Q
    |||||||||||||||  ||||||| |||||||||||| ||||||||||||    
T  31415997 tgggtacatatatccctgttatccatcccgtacccgtattttgaaatcgg 31415948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 31782642 - 31782711
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    |||||||||||||||  |||| | || |||||||||| ||||||||||||| ||||| ||||| ||||||    
T  31782642 tgggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaacccaaacccagtca 31782711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 40420827 - 40420754
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagac 85  Q
    ||||||||||| ||| |||||||||||||||| ||||| ||| || ||||| |||||| | || ||||||||||    
T  40420827 agagagaggccaagaatgtgagatatggaaggagaaaagagaaaagtatgataagtgagtgtcgtttgaaagac 40420754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 4652603 - 4652647
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaa 56  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||||    
T  4652603 agagagaggccgagagtgtgagatatgcaaggagaaaagagagaa 4652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 10574484 - 10574416
Alignment:
Q  188 gggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    ||||||||||||||  |||| |||||||||||| || || |||||||||| |||| |||||| ||||||    
T  10574484 gggtacatatatccccgttacccgtcccgtacctgtattatgaaatcggggaaaattcaaacccagtca 10574416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 21544608 - 21544663
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaa 242  Q
    |||||||||||||||   ||| | ||||||||||||| ||||||||||||||||||    
T  21544608 tgggtacatatatccccattacctgtcccgtacccgtattttgaaatcgggaaaaa 21544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 252
Target Start/End: Original strand, 37349171 - 37349206
Alignment:
Q  217 tacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||||||||||||| ||||||||||||||    
T  37349171 tacccgtgttttgaaatcggggaaaactcaaactca 37349206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 14605991 - 14605929
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||||||||||||  |||| ||||| ||||||||| ||||||||||||  ||||| |||||    
T  14605991 tgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaac 14605929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 23927879 - 23927785
Alignment:
Q  23 gagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattattta 117  Q
    |||||||| |||||||||| | ||||| |||||| ||||  |||||||| ||||  |||| |  |||  ||||| ||||||||||||||||||||    
T  23927879 gagagtgtaagatatggaatgagaaaagagagaattatgttaagtgattgtcatccgaaaaattgagattctaagtgtgtgagtgaaattattta 23927785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 47103767 - 47103829
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||||||||||||  |||| ||| ||||||||||| ||||||||| ||| ||||| |||||    
T  47103767 tgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaac 47103829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 1866611 - 1866550
Alignment:
Q  191 tacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||   ||| ||||| ||||||||| ||||||||||||||||||| || |||||    
T  1866611 tacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaacccatactca 1866550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 11173026 - 11173071
Alignment:
Q  211 gtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    ||||||||||||| ||||||||||||| ||||| ||||| ||||||    
T  11173026 gtcccgtacccgtattttgaaatcggggaaaacccaaacccagtca 11173071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 16575141 - 16575206
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||| |||||| | || || ||||||||    
T  16575141 tgggtacttatatcctcgttatccatcccgtacccgcgttttaaaatcgaggaatacccaaactca 16575206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 26564860 - 26564925
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||| ||||| |  |||| ||||||| |||||| |||||||||||||| ||| ||||||||||    
T  26564860 tgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactca 26564925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 37349112 - 37349145
Alignment:
Q  158 attttctacattcgggacgggtttgggtatgggt 191  Q
    ||||||| ||||||||||||||||||||||||||    
T  37349112 attttctgcattcgggacgggtttgggtatgggt 37349145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 45065277 - 45065326
Alignment:
Q  186 atgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcg 235  Q
    ||||||||||||||||  ||||  |||||||||||||| |||||||||||    
T  45065277 atgggtacatatatccctgttactcgtcccgtacccgtattttgaaatcg 45065326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 1724415 - 1724383
Alignment:
Q  159 ttttctacattcgggacgggtttgggtatgggt 191  Q
    |||||| ||||||||||||||||||||||||||    
T  1724415 ttttctgcattcgggacgggtttgggtatgggt 1724383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 7985226 - 7985194
Alignment:
Q  159 ttttctacattcgggacgggtttgggtatgggt 191  Q
    |||||| ||||||||||||||||||||||||||    
T  7985226 ttttctgcattcgggacgggtttgggtatgggt 7985194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 53906843 - 53906757
Alignment:
Q  100 tgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |||||||||||| | ||| | ||| | ||||||||||| |||||||| |||||  ||||||| ||||||| ||||||||||| ||||||    
T  53906843 tgtgagtgaaataacttaaggtttcgatttctatttatataaaaggggtaatat-ttgattt-ctacatttgggacgggtttaggtatg 53906757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 27252405 - 27252583
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||| || |||||| | |||| |||||||| ||   ||||||||||||||||||||    
T  27252405 agagagaggccgagagtgtgagatatggaaggagaaag-agagaactaagataagtgagtgtcatctgaaagactgatactctaactgtgtgagtgaaat 27252503  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
     ||||| | ||||||||||||||||| ||||| || |||||||||||  |||||||||| ||  | ||||||||||||||    
T  27252504 gatttatgattttggtttctatttatataaaatgggtaataaattgaaattctacattcagggtgagtttgggtatgggt 27252583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 26207119 - 26207290
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| |||||||||||||||||||||||||||| ||| |||||  |||||||||||||||||| | |||| | |||||  |||  |||||||||    ||    
T  26207119 ggagaagagagaggccgagagtgtgagatatgggaggagaaaaatgagaactatgacaagtgagtgtcatctaaaagatggagactctaactgt----gt 26207214  T
Q  107 gaaattatttaggtttttggtttctatttatct-aaaagggataataaattgattttctacattcgggacgggttt 181  Q
    ||||| ||||||| ||| |||||| |||||| | ||||  | ||||||||||||| |||||||||  |||||||||    
T  26207215 gaaatgatttagggtttgggtttcaatttatataaaaaaaggtaataaattgattatctacattcaagacgggttt 26207290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 249
Target Start/End: Complemental strand, 37032347 - 37032113
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    |||||||||| |||||||||  |||| ||||| ||||| | |||||||||| || ||  | |||| ||||||||||||  ||| | ||| ||||||||||    
T  37032347 agagagaggctgagagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaat 37032250  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggtacatatatcctagttatccg 211  Q
     ||||||| |||  |||| ||||||| ||||| || ||||||||| ||||||||||||| ||| ||||||| | ||| |||| ||||| |  |||| |||    
T  37032249 gatttagggtttgagtttttatttatataaaatgggtaataaattaattttctacattcaggatgggtttgag-atgagtacctatattcctgttacccg 37032151  T
Q  212 tcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||| |  | ||||||||||| || |||| |||||    
T  37032150 tcccgtatctatcttttgaaatcgagacaaacccaaac 37032113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 30904976 - 30904887
Alignment:
Q  102 tgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||||||| ||| ||| ||| ||||||||||||| |||||||| || ||||||||||| ||||||||| ||||| |||||||||||||    
T  30904976 tgagtgaaatgattaagggtttgggtttctatttatataaaaggggtagtaaattgatttcctacattcgagacggatttgggtatgggt 30904887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 19111757 - 19111822
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||| ||||| |  ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19111757 tgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcgggaaaaactcaaactca 19111822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 189
Target Start/End: Complemental strand, 3386092 - 3385930
Alignment:
Q  27 gtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttgg 126  Q
    ||||||||||||||||| || || |||||||| ||| ||| || | |||  | ||||||||||  | ||||| ||| |||||||| ||||||| ||| |     
T  3386092 gtgtgagatatggaaggagataagagagaactttgataagagagtgtcaactaaaagaccgagactttaactatgtaagtgaaatgatttaggatttcga 3385993  T
Q  127 tttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgg 189  Q
    ||| |||||||  ||||||| || |||| ||||||| |||||| || |||||||| |||||||    
T  3385992 tttttatttatagaaaagggttactaaaatgattttttacattaggtacgggttttggtatgg 3385930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 34592993 - 34593099
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    ||||||||| |||||||||||||||||||||| ||||  | |||||||||| |||||| | | || ||||||||||||   |||| ||||| ||||||||    
T  34592993 agagagaggtcgagagtgtgagatatggaaggagaaacaatagaactatgataagtgagtgttatgtgaaagaccgagaccctaattgtgtaagtgaaat 34593092  T
Q  112 tatttag 118  Q
     ||||||    
T  34593093 gatttag 34593099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 189
Target Start/End: Complemental strand, 3414769 - 3414607
Alignment:
Q  27 gtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttgg 126  Q
    ||||||||||||||||| || || | |||||| ||| ||| || | |||  | ||||| ||||  | | ||| |||||||||||| ||||||| ||| |     
T  3414769 gtgtgagatatggaaggagataagatagaactttgagaagagagtgtcaactaaaagaacgagactttgactatgtgagtgaaatgatttagggtttcga 3414670  T
Q  127 tttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgg 189  Q
    ||| |||||||  ||||||| || |||| |||||||||||||| || ||||||||| ||||||    
T  3414669 tttttatttatagaaaaggggtattaaaatgattttctacattaggtacgggtttgagtatgg 3414607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 27937568 - 27937734
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttg--------aaagaccgagtatctaactgtgtg 103  Q
    |||||||| ||||||||||||||||||||| | ||||| | |||||||| | |||||| | |||||||        |||||  |||  || ||  |||||    
T  27937568 agagagagaccgagagtgtgagatatggaaagagaaaagaaagaactataataagtgagtgtcatttgaaagagtcaaagattgagactcaaatcgtgtg 27937667  T
Q  104 agtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattc 170  Q
    |||||||| ||||||| ||| ||||||||||||| ||||||   ||||||||| |||| ||||||||    
T  27937668 agtgaaatgatttagggtttaggtttctatttatataaaagctgtaataaattaatttcctacattc 27937734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 34119679 - 34119744
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||| ||||| |  |||||||||| | |||||||||||| |||||||||||||||||||||||    
T  34119679 tgggtacctatatacctgttatccgtctcatacccgtgttttaaaatcgggaaaaactcaaactca 34119744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 35687554 - 35687491
Alignment:
Q  189 ggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||||  ||||| ||||| ||||||||| || |||||||||| ||||||||||||||    
T  35687554 ggtacatatatcacagttacccgtctcgtacccgtattatgaaatcggggaaaactcaaactca 35687491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 42243346 - 42243475
Alignment:
Q  134 ttatctaaaagggataataaattgattttctacattcgggacgggtttgggta-----------tgggtacatatatcctagttatccgtcccgtacccg 222  Q
    |||| |||||||| ||||||||||||||||||||||  ||| |||||||||||           ||| || ||||||||| |||| || || | ||||||    
T  42243346 ttatataaaaggggtaataaattgattttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatctcatacccg 42243445  T
Q  223 tgttttgaaatcgggaaaaactcaaactca 252  Q
    ||| ||||||||||||||||| ||||||||    
T  42243446 tgtattgaaatcgggaaaaacccaaactca 42243475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 4553162 - 4553206
Alignment:
Q  147 ataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||    
T  4553162 ataataaattgattttttacattcgagacgggtttgagtatgggt 4553206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 4016109 - 4016047
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||| ||||| |  |||||||||||| ||||| ||||||||||||||| ||||| |||||    
T  4016109 tgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaaac 4016047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 40796202 - 40796148
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaa 241  Q
    ||||||||| ||||||  ||| ||||||||||||||| |||||||||||| ||||    
T  40796202 tgggtacatgtatcctcattacccgtcccgtacccgtattttgaaatcggaaaaa 40796148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 772958 - 772882
Alignment:
Q  98 tgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggac 175  Q
    |||||||||||||| ||| | | |||  ||||||||||||  ||||||| |||||||||||||||||| ||| |||||    
T  772958 tgtgtgagtgaaatgattcaaggtttgagtttctatttatacaaaaggg-taataaattgattttctatatttgggac 772882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 3385913 - 3385860
Alignment:
Q  195 tatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaa 248  Q
    |||||||| |||| | ||||||||||||||||||||||| || ||||| |||||    
T  3385913 tatatcctcgttacctgtcccgtacccgtgttttgaaatgggtaaaaattcaaa 3385860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 40890298 - 40890362
Alignment:
Q  126 gtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||||||||| || |||| ||||||||||||||||||||||| | || | | ||||||||||||    
T  40890298 gtttctatttatatagaagg-ataataaattgattttctacatttgagatgagcttgggtatgggt 40890362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 48390883 - 48390826
Alignment:
Q  186 atgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    |||||||| ||||| |  |||| ||||||| ||||||||||||||||||||| |||||    
T  48390883 atgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaac 48390826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 4553235 - 4553275
Alignment:
Q  209 ccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||| ||| |||| |||||||||||||||||||||||||||    
T  4553235 ccgttccgcacccatgttttgaaatcgggaaaaactcaaac 4553275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 40890203 - 40890251
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatga 62  Q
    ||||||| || |||||||||| |||||||| ||||| ||||||||||||    
T  40890203 agagaggtcgggagtgtgagagatggaaggagaaaagagagaactatga 40890251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 49025720 - 49025772
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    |||| ||||||| |||||||||||||| |||||| ||||| ||||| ||||||    
T  49025720 gttacccgtcccatacccgtgttttgagatcggggaaaacccaaacccagtca 49025772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 49580087 - 49580143
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||| ||||| || |||| ||||||| |||||||||||||| |||||| |||||    
T  49580087 tgggtacctatatactcgttacccgtcccatacccgtgttttgagatcggggaaaac 49580143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 11472949 - 11472788
Alignment:
Q  26 agtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttg 125  Q
    |||||||||||||||||| || || |||||||||||| |||||| | |||| | |||||| |||  |||||||  ||||||||||| ||||||| |||||    
T  11472949 agtgtgagatatggaaggagataagagagaactatgataagtgagtgtcatctaaaagactgagactctaactacgtgagtgaaatgatttagggttttg 11472850  T
Q  126 gtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |||||||||||| ||||||| |||||||||||||||||| |||| ||||||| ||||||||||    
T  11472849 gtttctatttatataaaaggtataataaattgattttct-catttgggacggatttgggtatg 11472788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 37217848 - 37218017
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatta 113  Q
    |||||||||||||||||||||||||||||| || || |||||||||||| | |||| | |||| ||||| ||||||  ||| | ||||| ||| |||| |    
T  37217848 agagaggccgagagtgtgagatatggaaggagagaagagagaactatgatatgtgagtgtcatatgaaaaaccgagactctgattgtgttagtaaaatga 37217947  T
Q  114 tttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttggg 184  Q
    ||||||  ||  ||||||||||||  ||||| |||||| ||||||||||||| |||| |||||||||||||    
T  37217948 tttaggcattgagtttctatttatacaaaagagataat-aattgattttctatattcaggacgggtttggg 37218017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 3156926 - 3157167
Alignment:
Q  13 gagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatt 112  Q
    ||||||||| |||||||||| ||||||||||  |||| |||||||||| | |||||| | |||| | ||||||| ||  ||| |||  | ||||||||      
T  3156926 gagagaggcggagagtgtgacatatggaaggaaaaaagagagaactataataagtgagtgtcatctaaaagaccaagactctgactacgcgagtgaaagg 3157025  T
Q  113 atttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggta-----------tgggtacatatatcc 201  Q
    ||||||| ||| ||||||||||||| ||  |||| ||||||||||||||||||  || ||||||||||||||||           ||||||| |||||||    
T  3157026 atttaggatttgggtttctatttatatagtaggggtaataaattgattttctatgtttgggacgggtttgggtataggttcggtgtgggtacctatatcc 3157125  T
Q  202 tagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
      |||||||||||| ||||| | ||||||||||||| |||||    
T  3157126 ccgttatccgtcccatacccatattttgaaatcggggaaaac 3157167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 3773905 - 3774090
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgag 105  Q
    ||||| ||||||||||||||||||||||  ||| |||| ||||| | |||||||||| || ||  | |||| |||||| | ||   ||| ||||||||||    
T  3773905 aggagaagagagaggccgagagtgtgaggcatgaaaggagaaaagatagaactatgataaatgggtgtcatatgaaagtctgaaactctgactgtgtgag 3774004  T
Q  106 tgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    | |||| |||| |  ||| |||| ||| |||| |||||||| |||||||||||||||||| ||||||||||| |||| ||||||||    
T  3774005 taaaatgattttgcgtttgggttcctaattatataaaaggggtaataaattgattttctaaattcgggacggatttgagtatgggt 3774090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 42908133 - 42908041
Alignment:
Q  160 tttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||||||  ||||||||||||||||||||||||||   ||| ||||||||||||||| ||||||||||||| ||||| ||||||||    
T  42908133 tttctacattcgggtagggtttgggtatgggtacatatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaaactca 42908041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 24753163 - 24753246
Alignment:
Q  158 attttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaa 241  Q
    ||||| |||||| ||||||||||||||||||||||| ||||| |  |||| ||||||| |||||||||||||| ||||||||||    
T  24753163 attttttacatttgggacgggtttgggtatgggtacctatatacccgttacccgtcccatacccgtgttttgagatcgggaaaa 24753246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 29292536 - 29292723
Alignment:
Q  16 agaggccgagagt--gtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatt- 112  Q
    |||||||||||||  ||||||| || |||| ||||| ||||| |||||| |||||||| |||| | ||||||||||  ||| ||| ||| |||||||||     
T  29292536 agaggccgagagtacgtgagatttgaaaggagaaaaaagagagctatgataagtgattgtcatctaaaagaccgagactctgactatgttagtgaaattt 29292635  T
Q  113 ---------atttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
             ||||||| ||| | ||||| ||||| |||||||| || ||||||||||||||||||||| |||| |||| |||||||||    
T  29292636 agtgaaataatttagggtttggatttctctttatataaaaggggtagtaaattgattttctacattcgagacgagtttaggtatgggt 29292723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 43550671 - 43550491
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||| | |||| | ||| || | | | | | ||||||||| |||  ||| ||  | |||||    
T  43550671 ggagaagatagaggccgagattgtgagatatggaaggagaaaagaaagaaatgtgataaataagtgttaattgaaagactgagactctgacatt-tgagt 43550573  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    ||||| ||||||| ||| ||||||||||||| || ||||| |||||||| || |||| |||||| ||||||||||| |||||    
T  43550572 gaaatgatttagggtttgggtttctatttatatagaaggggtaataaatagactttccacattcaggacgggtttgtgtatg 43550491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 256
Target Start/End: Complemental strand, 23475427 - 23475259
Alignment:
Q  100 tgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttct-acattcgggacgggtttgggtat----------- 187  Q
    |||||||||||| ||||||  ||| ||||| |||||||  |||| || || |||||||||||| | |||||||||||||||||||||||               
T  23475427 tgtgagtgaaatgatttagagtttgggtttttatttatacaaaacgggtagtaaattgatttttttacattcgggacgggtttgggtatgggttcgaagt 23475328  T
Q  188 gggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    ||||||||||||||   ||| || ||||  |||||||||||||||||||||||||| ||||| ||||||    
T  23475327 gggtacatatatccccattacccatcccaaacccgtgttttgaaatcgggaaaaacccaaacccagtca 23475259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 29014998 - 29014952
Alignment:
Q  206 tatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29014998 tatccgtcccgtacccgtattttgaaatcgggaaaaactcaaactca 29014952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 19440174 - 19440082
Alignment:
Q  100 tgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttct-acattcgggacgggtttgggtatgggt 191  Q
    |||||||||||| ||||||  ||| |||||||||||||   |||||| |  |||||||||||| | |||||||||||||||||||||||||||    
T  19440174 tgtgagtgaaatgatttagagtttgggtttctatttataccaaaggggtggtaaattgatttttttacattcgggacgggtttgggtatgggt 19440082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 23533854 - 23533675
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatta 113  Q
    ||||||||||||| ||||||||||| || |  || | |||||||| | | || ||| | |||| ||||| || |||  ||| ||| |||||||||||| |    
T  23533854 agagaggccgagaatgtgagatatgaaatgaaaatagagagaactgtaataaatgagtgtcatctgaaacactgagactctgactatgtgagtgaaatga 23533755  T
Q  114 tttaggtttttggtttctatttatctaaaagggataa-taaattgattttct-acattcgggacgggtttgggtatgggt 191  Q
    |||||  ||| |||||||| ||||  ||||||| | | |||||||||||| | |||||||||||| ||||||||||||||    
T  23533754 tttagagtttgggtttctaattatacaaaaggggttagtaaattgatttttttacattcgggacgagtttgggtatgggt 23533675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 27063169 - 27063231
Alignment:
Q  190 gtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||||  ||||||||||| |||||||| ||||||||||| | ||||||||||||||    
T  27063169 gtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactca 27063231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 4101470 - 4101563
Alignment:
Q  98 tgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||||||||||| ||| ||| |||  |||| ||||||  |||||  | |||||||||||||||| |||||| ||||||||| ||||||||||    
T  4101470 tgtgtgagtgaaatgattaagggtttgagtttttatttaaataaaattggtaataaattgattttcaacattcaggacgggttagggtatgggt 4101563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 36251045 - 36251009
Alignment:
Q  148 taataaattgattttctacattcgggacgggtttggg 184  Q
    |||||||||||||||||||||||||||||||||||||    
T  36251045 taataaattgattttctacattcgggacgggtttggg 36251009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 37103193 - 37103129
Alignment:
Q  186 atgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaact 250  Q
    |||||| |||||||||| |||| || |||||||||||| |||||||||| |||||||| ||||||    
T  37103193 atgggtgcatatatcctcgttacccttcccgtacccgtattttgaaatcaggaaaaacacaaact 37103129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 175
Target Start/End: Original strand, 31345384 - 31345531
Alignment:
Q  28 tgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttggt 127  Q
    |||||||||||||||  ||||| |||||| ||||| |||||| | |||| | || ||| |||  | | | |||||||||||||| || |||  |||  ||    
T  31345384 tgtgagatatggaagaagaaaagagagaattatgataagtgagtgtcatctaaatgactgagactttgattgtgtgagtgaaatgatatagagtttgagt 31345483  T
Q  128 ttctatttatctaaaagggataataaattgattttctacattcgggac 175  Q
    |||||||||| |||||  | || |||||||||||| ||||||||||||    
T  31345484 ttctatttatataaaaatggtagtaaattgattttttacattcgggac 31345531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 32546220 - 32546275
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaa 242  Q
    |||||||||||||||  |||| |||| |||||||||| ||||||||||||||||||    
T  32546220 tgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgggaaaaa 32546275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 673176 - 673130
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaact 250  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  673176 gttattcgtccagtacccgtgttttggaatcgggaaaaactcaaact 673130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 33841109 - 33841167
Alignment:
Q  190 gtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaa 248  Q
    ||||||||| ||  |||| ||||||| ||||||||||||||||||||| ||||||||||    
T  33841109 gtacatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaactcaaa 33841167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 3920566 - 3920635
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    ||||||| ||||| |  |||||||||||| |||| |||||||||||||||| ||||| ||||| ||||||    
T  3920566 tgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggggaaaacccaaacccagtca 3920635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 27850431 - 27850398
Alignment:
Q  158 attttctacattcgggacgggtttgggtatgggt 191  Q
    ||||||||||||||||||||||||||||||||||    
T  27850431 attttctacattcgggacgggtttgggtatgggt 27850398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 18684006 - 18684058
Alignment:
Q  191 tacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    |||||||||||  |||| ||||||||||||||| ||||||||||||| |||||    
T  18684006 tacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaac 18684058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 45885830 - 45885771
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactca 246  Q
    ||||||| ||||| || |||| ||||||| |||||||||||||| |||||| ||||||||    
T  45885830 tgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaactca 45885771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 18825937 - 18825875
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||| ||||| |  |||| ||||||| ||||||||||||||||||||| ||||| |||||    
T  18825937 tgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 18825875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 44845200 - 44845138
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||| |||||||||  ||| ||||||||||||||| || |||||||||| ||||| |||||    
T  44845200 tgggtaaatatatcctcattaaccgtcccgtacccgtattatgaaatcggggaaaacccaaac 44845138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 10995899 - 10995834
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||| ||||| ||  |||| ||||||| ||||||||| ||||||||||| ||||| ||||||||    
T  10995899 tgggtatatataaccctgttacccgtcccatacccgtgtcttgaaatcggggaaaacccaaactca 10995834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 11472743 - 11472714
Alignment:
Q  223 tgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||||||||||||||||||||||    
T  11472743 tgttttgaaatcgggaaaaactcaaactca 11472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 30839195 - 30839134
Alignment:
Q  191 tacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||  ||||  |||||| ||||||| |||||||||| || ||||||||||||||    
T  30839195 tacatatatccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaactca 30839134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 246
Target Start/End: Complemental strand, 44658502 - 44658473
Alignment:
Q  217 tacccgtgttttgaaatcgggaaaaactca 246  Q
    ||||||||||||||||||||||||||||||    
T  44658502 tacccgtgttttgaaatcgggaaaaactca 44658473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 3227011 - 3226955
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||| ||||| |  |||| ||||||| ||||||||||||||||||||| |||||    
T  3227011 tgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaac 3226955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 6557962 - 6557799
Alignment:
Q  27 gtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttgg 126  Q
    ||||||||| ||||||| ||| | ||||||||  || |||||| | |||| |||||||| |||  | | | |||||||||||||| ||||||  |||  |    
T  6557962 gtgtgagatgtggaaggagaagagagagaacttagagaagtgagtgtcatctgaaagactgagactttgattgtgtgagtgaaatgatttagagtttgag 6557863  T
Q  127 tttctatttatctaaaagggataataaattga--ttttctacattcgggacgggtttgggtatg 188  Q
     |||||||| | | ||| |||||||||| |||  |||| || ||||| ||||| ||||||||||    
T  6557862 attctatttctatgaaaaggataataaactgattttttttatattcgagacggatttgggtatg 6557799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 37218050 - 37218098
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||| |||||||||||| |||||||||||| ||  ||||||||||||||    
T  37218050 gttacccgtcccgtacctgtgttttgaaataggataaaactcaaactca 37218098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 41103684 - 41103740
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||| ||||| |  |||| ||||||| ||||||||||||||||||||| |||||    
T  41103684 tgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcggggaaaac 41103740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 41741498 - 41741450
Alignment:
Q  204 gttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||| | ||||||||||||||||||||| ||||| || |||||    
T  41741498 gttatccgtctcatacccgtgttttgaaatcggggaaaacccatactca 41741450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 45380135 - 45380191
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||| ||||| |  |||| ||||||| ||||||| |||||||||||||||||||    
T  45380135 tgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaac 45380191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 30696756 - 30696938
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgag 105  Q
    ||||| |||||||||  |||||||||||||| |  ||| |||||||||||||||||  ||| || | |||| ||||||||||||  ||||||||||||||    
T  30696756 aggagaagagagaggttgagagtgtgagatacgagaggagaaaatagagaactatggtaagagaatgtcatatgaaagaccgagactctaactgtgtgag 30696855  T
Q  106 tgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    ||| || ||||||| |||   ||||||||||| ||||| || ||||||||||||||| |||||| ||||  ||||||||||||    
T  30696856 tgacatgatttagggtttgaatttctatttatataaaatgggtaataaattgattttttacatttgggataggtttgggtatg 30696938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 34544560 - 34544386
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatta 113  Q
    |||||| | ||||||||||||||||||||| | ||| |||||||||||| |||||||| |||| | ||||| ||||  |||   ||||||| ||||||||    
T  34544560 agagagactgagagtgtgagatatggaaggagtaaagagagaactatgagaagtgattgtcatctaaaagaacgagagtctcgttgtgtgaatgaaatta 34544461  T
Q  114 tttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |||||| |||  |||| ||||||| ||||| || |||||||| |||||||||||||||||| ||||||| |||||    
T  34544460 tttagggtttgagtttttatttatataaaatgggtaataaatagattttctacattcgggaggggtttgagtatg 34544386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 25210209 - 25210457
Alignment:
Q  6 aggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgag 105  Q
    ||||| |||||||| |||||||||||||  ||| |||| ||||| ||| |||||||| |||||| |  ||| | |||  | |||  ||  ||||||||||    
T  25210209 aggagaagagagagtccgagagtgtgagccatgaaaggtgaaaagagataactatgataagtgagtgccatctaaaattctgagactccgactgtgtgag 25210308  T
Q  106 tgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggta-----------tgggtaca 194  Q
    |||||| ||||||| |||  |||||||||||| ||||| || ||| ||||||||||||||||||||||| |||||| ||||           ||||||||    
T  25210309 tgaaatgatttagggtttgagtttctatttatataaaatgggtaacaaattgattttctacattcgggaggggttttggtatgggtttggggtgggtaca 25210408  T
Q  195 tatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    |||||||| |||| ||||||| |||||||||||| || |||||||||||    
T  25210409 tatatcctcgttacccgtcccatacccgtgttttaaagtcgggaaaaac 25210457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 37309867 - 37309744
Alignment:
Q  127 tttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggtacatatatcctagttatccgtcccgtacccgtgtt 226  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||| |  |||||||||||||||| ||||| |||||| ||||| |||     
T  37309867 tttctatttatgtaaaagggatgataaattgattttctaccttcgggacgggtttgag-gtgggtacatatatcctcgttat-cgtcccatacccatgta 37309770  T
Q  227 ttgaaatcgggaaaaactcaaactca 252  Q
    ||||||| | ||||||||||||||||    
T  37309769 ttgaaattgagaaaaactcaaactca 37309744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 35248637 - 35248457
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||||||||| | |||||||||||||||||| || || |||||||||| | ||| || | ||||||||||||| |||  |||  ||||||||||    
T  35248637 ggagaagagagaggccaaaagtgtgagatatggaaggagataagagagaactataataagcgagtgtcatttgaaagactgagactctgtctgtgtgagt 35248538  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||||| ||||||| |||   ||||||||||| |||||||| | ||| ||   |||||||||||| ||||||||||||||||||||    
T  35248537 gaaatgatttagggtttcattttctatttatataaaaggggt-atatat---ttttctacattcaggacgggtttgggtatgggt 35248457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 35965167 - 35965352
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||||| | |||||||||||||||||||||| || || |||||||||||| |||||| | | || ||||| || |||   || ||||| |||||    
T  35965167 ggagaagagagatgacgagagtgtgagatatggaaggagataaaagagaactatgataagtgaatgttatctgaaaaactgagatcctcactgtatgagt 35965266  T
Q  107 gaaattatttaggtttttggtttctattta-tctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||||| ||||| |  ||   || ||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  35965267 gaaatgatttatggattcaattcctatttagtataaaaggggcaataaattgattttctacattcgggacgggtttgggtatgggt 35965352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 29656992 - 29656829
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaa-gtgattctcatttgaaagaccgagtatctaactgtgtgag 105  Q
    |||| ||||||||||||||| ||||||||||| |||| || || |||||| ||||| || || | | |||| |||||||| |||  | | ||||||||||    
T  29656992 ggagaagagagaggccgagaatgtgagatatgtaaggagataagagagaattatgataaagtcagtgtcatctgaaagactgagactttgactgtgtgag 29656893  T
Q  106 tgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacatt 169  Q
    | |||| ||||||| || |||||| ||||||| |||||||||||||||||||||||| ||||||    
T  29656892 tcaaatgatttagggttatggtttttatttatataaaagggataataaattgattttatacatt 29656829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 256
Target Start/End: Complemental strand, 35409408 - 35409163
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| ||||||||||||||||||||||||||||| |  ||||| |  ||||||||| |||||| | |||| || ||||| |||  ||| ||||||| |||    
T  35409408 ggagaagagagaggccgagagtgtgagatatggacgaagaaaagaatgaactatgataagtgagtgtcatatgtaagactgagactctgactgtgtaagt 35409309  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggtacatatatcctagtt 206  Q
    |||||  |||||  ||| ||||| ||||||  || || || ||| ||||||||||| ||||||| |||||||||||||  ||||||| ||||||   |||    
T  35409308 gaaatagtttagagtttgggtttttattta--tataacgggtaaaaaattgattttatacattc-ggacgggtttggg-gtgggtacctatatctacgtt 35409213  T
Q  207 atccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactcagtca 256  Q
    | |  ||||||||  |||||||||||||||| ||||| ||||| ||||||    
T  35409212 acctttcccgtactagtgttttgaaatcggggaaaacccaaacccagtca 35409163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 17845556 - 17845463
Alignment:
Q  99 gtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattga-ttttctacattcgggacgggtttgggtatgggt 191  Q
    ||||||||||||| ||||||||||   |||||||||||| ||||| |||||||||||||| |||| |||||||| |||||||||||||||||||    
T  17845556 gtgtgagtgaaatgatttaggtttggagtttctatttatataaaaaggataataaattgatttttttacattcgagacgggtttgggtatgggt 17845463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 34214907 - 34214732
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    ||||||||||||| |||||||||||| ||||| ||||| || ||||||||| |||||| | |||| |||||||| |||  ||| ||||||| ||||||||    
T  34214907 agagagaggccgaaagtgtgagatatcgaaggagaaaagagcgaactatgataagtgagtgtcatgtgaaagactgagactctgactgtgttagtgaaat 34214808  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
     ||||| |  ||  |||||||||||| ||||  ||  |||||||||| |||||||||   ||||||||||| |||||    
T  34214807 gattta-gagttgagtttctatttatataaacagggcaataaattgactttctacatctaggacgggtttgagtatg 34214732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 13531873 - 13531966
Alignment:
Q  98 tgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||||||||||| ||||||| |||  |||||||||||| ||||| ||||||||||||||||||||||||  ||| |||||||| || |||||    
T  13531873 tgtgtgagtgaaatgatttagggtttgagtttctatttatataaaatggataataaattgattttctacatgtggggcgggtttgagtgtgggt 13531966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 190
Target Start/End: Original strand, 13954611 - 13954761
Alignment:
Q  40 aaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttggtttctatttatct 139  Q
    |||| ||||| |||||||||| | |||||| | |||| |||||| | |||  ||| || | ||||||||||| ||||||| ||   |||||||||||| |    
T  13954611 aaggagaaaagagagaactatcataagtgagtgtcatctgaaagtctgagactctcaccgagtgagtgaaatgatttagggttcgagtttctatttatat 13954710  T
Q  140 aaaagggataataaattgattttctacattcgggacgggtttgggtatggg 190  Q
    ||||| | |||||| |||||||||||| |||| |||||||||| |||||||    
T  13954711 aaaagtggtaataagttgattttctacgttcgagacgggtttgagtatggg 13954761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 190
Target Start/End: Original strand, 14095818 - 14095968
Alignment:
Q  40 aaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttggtttctatttatct 139  Q
    |||| ||||| |||||||||| | |||||| | |||| |||||| | |||  ||| || | ||||||||||| ||||||| ||   |||||||||||| |    
T  14095818 aaggagaaaagagagaactatcataagtgagtgtcatctgaaagtctgagactctcaccgagtgagtgaaatgatttagggttcgagtttctatttatat 14095917  T
Q  140 aaaagggataataaattgattttctacattcgggacgggtttgggtatggg 190  Q
    ||||| | |||||| |||||||||||| |||| |||||||||| |||||||    
T  14095918 aaaagtggtaataagttgattttctacgttcgagacgggtttgagtatggg 14095968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 31601017 - 31600873
Alignment:
Q  14 agagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaatta 113  Q
    ||||||||| | ||||||||||||||||||  | || |||||||||||| ||||||   |||| ||||||||  ||  ||||||||| |||||||||| |    
T  31601017 agagaggccaatagtgtgagatatggaaggatagaagagagaactatgataagtgagcgtcatatgaaagactaagactctaactgtatgagtgaaatga 31600918  T
Q  114 tttaggtttttggtttctatttatctaaaagggataataaattga 158  Q
    |||||  |||  |||||||||||| |||||||  || ||||||||    
T  31600917 tttagagtttgagtttctatttatataaaaggcgtattaaattga 31600873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 40734834 - 40734709
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    |||| ||||| |||||||||||||||| |||| || || | | |||||||| |  |||   ||||||||||||| |||  ||| ||||||||||||||||    
T  40734834 agagggaggctgagagtgtgagatatgtaaggagacaaaataaaactatgatatatgagaatcatttgaaagactgagactctgactgtgtgagtgaaat 40734735  T
Q  112 tatttaggtttttggtttctatttat 137  Q
     ||||||| ||||||||| |||||||    
T  40734734 gatttagggttttggtttttatttat 40734709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 188
Target Start/End: Original strand, 11958914 - 11959029
Alignment:
Q  73 tcatttgaaagaccgagtatctaactgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgg 172  Q
    |||| ||||||||||||  ||||||||||| ||| |||| || ||||||||  ||||||  |||| |||||| | ||||||||||||||| |||||||      
T  11958914 tcatctgaaagaccgagactctaactgtgtaagttaaatgatctaggttttgagtttctgcttatataaaagaggtaataaattgattttatacattcat 11959013  T
Q  173 gacgggtttgggtatg 188  Q
    || | |||||||||||    
T  11959014 gatgagtttgggtatg 11959029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 43371577 - 43371639
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||||||||||||  |||| ||||||||||||||| |||| |||||||| |||||||||||    
T  43371577 tgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaac 43371639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 30978955 - 30979014
Alignment:
Q  191 tacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||| |||||||   |||||||||| ||||||||||||||||||| ||||||||    
T  30978955 tacatatatcctcgttatcct--ccgtacccgtattttgaaatcgggaaaaacccaaactca 30979014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 38342584 - 38342522
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||||||||||||  |||| |||||||||| |||| |||| |||||||| |||||||||||    
T  38342584 tgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaac 38342522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 3547190 - 3547251
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaa 248  Q
    ||||||||||||||   |||| ||||||||||||||| |||||||||||| |||||| ||||    
T  3547190 tgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcggtaaaaacccaaa 3547251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 34214698 - 34214657
Alignment:
Q  211 gtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  34214698 gtcccgtacccgtgttttgaaattgagaaaaactcaaactca 34214657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 4961575 - 4961523
Alignment:
Q  139 taaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    |||||| | ||||||||| |||||||| |||||||||| ||||||||||||||    
T  4961575 taaaagaggtaataaattcattttctatattcgggacgagtttgggtatgggt 4961523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 22900841 - 22900880
Alignment:
Q  210 cgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  22900841 cgtcccatacccgtgttttgaaatcgggaaaaacccaaac 22900880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 15546768 - 15546830
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||| ||||| ||  |||| ||||||| ||||||||||||||||||||| ||||| |||||    
T  15546768 tgggtatatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 15546830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 33174319 - 33174369
Alignment:
Q  100 tgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataa 150  Q
    |||||||||| || |||||| ||| ||||||||||||| ||||||||||||    
T  33174319 tgtgagtgaagttgtttagggtttgggtttctatttatataaaagggataa 33174369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 4961658 - 4961609
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaa 56  Q
    |||| ||||||||  |||||||||||||||||||||| ||||| ||||||    
T  4961658 ggagaagagagagatcgagagtgtgagatatggaaggagaaaagagagaa 4961609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 26755741 - 26755778
Alignment:
Q  164 tacattcgggacgggtttgggtatgggtacatatatcc 201  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  26755741 tacattcgggtagggtttgggtatgggtacatatatcc 26755778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 40359262 - 40359339
Alignment:
Q  92 tctaactgtgtgagtgaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacatt 169  Q
    |||||||| |||| |||||| ||||||  |||  |||||||||||| ||||||   ||||||||||||||| ||||||    
T  40359262 tctaactgcgtgactgaaatgatttagactttgagtttctatttatataaaagatgtaataaattgattttttacatt 40359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 34320598 - 34320638
Alignment:
Q  149 aataaattgattttctacattcgggacgggtttgggtatgg 189  Q
    |||||| |||||||| |||||||||||| ||||||||||||    
T  34320598 aataaaatgattttcaacattcgggacgtgtttgggtatgg 34320638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 35965388 - 35965420
Alignment:
Q  217 tacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||||||||||||||||| |||||||||||    
T  35965388 tacccgtgttttgaaatcggggaaaactcaaac 35965420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 37106716 - 37106772
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaac 243  Q
    ||||||| ||||| |  |||| ||||||| ||||||||||||||||||||| |||||    
T  37106716 tgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 37106772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 4831 - 4673
Alignment:
Q  12 agagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagtgaaat 111  Q
    |||||||| |||| ||||||| ||||||||||  |||| |||||||||||| |||||| | | || | |||||||| |  ||| ||||||||||||||||    
T  4831 agagagagaccgatagtgtgaaatatggaaggaaaaaagagagaactatgataagtgagtgttatctaaaagaccgtgactctgactgtgtgagtgaaat 4732  T
Q  112 tatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattc 170  Q
     ||||||  ||||| ||||||||||| |||||||| | |||| ||||||||||||||||    
T  4731 gatttagagttttgatttctatttatataaaaggggttataatttgattttctacattc 4673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 944 - 1120
Alignment:
Q  7 ggagcagagagaggccgagagtgtgagatatggaaggggaaaatagagaactatgacaagtgattctcatttgaaagaccgagtatctaactgtgtgagt 106  Q
    |||| |||||||||  |||||||||||||||| |||| ||||| |||||| ||||| |||||||| |||| | |||||  |||  | | ||   ||||||    
T  944 ggagaagagagaggaggagagtgtgagatatgaaaggagaaaa-agagaattatgataagtgattgtcatcttaaagaatgagactttgaccacgtgagt 1042  T
Q  107 gaaattatttaggtttttggtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttggg 184  Q
    ||||| ||||| | |||  |||||||||||| ||||| || ||||||||| |||||||||||||  ||||||||||||    
T  1043 gaaatgatttaagatttgagtttctatttatataaaatgggtaataaattaattttctacattcatgacgggtttggg 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 2992 - 3057
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||||||| ||||| ||||||||    
T  2992 tgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactca 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 70118 - 70183
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||||||| |||| ||||||||||||||| || ||||||| |||||||  ||||||||    
T  70118 tgggtacatatatcctcgttacccgtcccgtacccgtattatgaaatcaggaaaaatccaaactca 70183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 20865 - 20811
Alignment:
Q  137 tctaaaagggataataaattgattttctacattcgggacgggtttgggtatgggt 191  Q
    ||||||| | |||||||||||||||| ||||||||| ||||||||| ||||||||    
T  20865 tctaaaacgaataataaattgattttttacattcggaacgggtttgagtatgggt 20811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 14809 - 14871
Alignment:
Q  126 gtttctatttatctaaaagggataataaattgattttctacattcgggacgggtttgggtatg 188  Q
    |||||||||||| ||||||||  ||||||||||| || ||| ||| |||||||||||||||||    
T  14809 gtttctatttatataaaaggggaaataaattgatgttttaccttcaggacgggtttgggtatg 14871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 33416 - 33478
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||||||||| |  |||| ||||||| ||||||||||||||||||||| ||||| |||||    
T  33416 tgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 33478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 67772 - 67827
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaa 242  Q
    |||||||||||||||  ||||||||||||||| |||| |||| |||||||| ||||    
T  67772 tgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaa 67827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 75615 - 75670
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaa 242  Q
    |||||||||||||||  ||||||||||||||| |||| |||| |||||||| ||||    
T  75615 tgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaa 75670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 211387 - 211449
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    |||||||||||||||  |||| ||||| ||||||||| ||||||||||||  ||||| |||||    
T  211387 tgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaac 211449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 128186 - 128121
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaaactca 252  Q
    |||||||||||||||   ||| ||||||||||||||| || |||||| || |||||| ||||||||    
T  128186 tgggtacatatatccccattacccgtcccgtacccgtattatgaaattggaaaaaacccaaactca 128121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 16990 - 17050
Alignment:
Q  187 tgggtacatatatcctagttatccgtcccgtacccgtgttttgaaatcgggaaaaactcaa 247  Q
    |||||||||||||||  || | ||||||| ||| ||| ||||||||||||||||| |||||    
T  16990 tgggtacatatatccccgtcacccgtcccatacacgtattttgaaatcgggaaaagctcaa 17050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 107434 - 107394
Alignment:
Q  209 ccgtcccgtacccgtgttttgaaatcgggaaaaactcaaac 249  Q
    ||||||| |||| |||||||||||||| |||||||||||||    
T  107434 ccgtcccatacctgtgttttgaaatcgagaaaaactcaaac 107394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University