View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21530_low_6 (Length: 291)

Name: NF21530_low_6
Description: NF21530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21530_low_6
NF21530_low_6
[»] chr3 (17 HSPs)
chr3 (63-277)||(54101836-54102055)
chr3 (13-65)||(4222160-4222212)
chr3 (13-64)||(14339630-14339681)
chr3 (12-53)||(8501577-8501618)
chr3 (13-65)||(30311325-30311377)
chr3 (13-65)||(47454622-47454674)
chr3 (13-64)||(27923048-27923099)
chr3 (13-64)||(29563920-29563971)
chr3 (13-64)||(36720401-36720452)
chr3 (14-65)||(46518647-46518698)
chr3 (14-64)||(17108904-17108954)
chr3 (14-64)||(44069778-44069828)
chr3 (13-46)||(36010780-36010813)
chr3 (12-45)||(49452912-49452945)
chr3 (12-65)||(53412964-53413017)
chr3 (13-65)||(8170691-8170743)
chr3 (13-65)||(37051299-37051351)
[»] chr5 (7 HSPs)
chr5 (13-65)||(43442215-43442267)
chr5 (14-64)||(29692392-29692442)
chr5 (12-65)||(30883202-30883255)
chr5 (13-65)||(12877712-12877764)
chr5 (13-45)||(14285200-14285232)
chr5 (13-65)||(21549142-21549194)
chr5 (13-65)||(25627076-25627128)
[»] chr8 (16 HSPs)
chr8 (12-65)||(30483888-30483941)
chr8 (12-64)||(23361653-23361705)
chr8 (13-60)||(36205219-36205266)
chr8 (13-65)||(33727878-33727930)
chr8 (13-64)||(28783080-28783131)
chr8 (13-64)||(35641906-35641957)
chr8 (17-63)||(4435996-4436042)
chr8 (19-65)||(7286226-7286272)
chr8 (16-65)||(2203511-2203560)
chr8 (12-65)||(6536539-6536592)
chr8 (13-65)||(3624599-3624651)
chr8 (13-45)||(11819815-11819847)
chr8 (13-65)||(16852359-16852411)
chr8 (13-65)||(19703492-19703544)
chr8 (13-45)||(27750769-27750801)
chr8 (13-65)||(35690069-35690121)
[»] scaffold0194 (1 HSPs)
scaffold0194 (13-64)||(13051-13102)
[»] chr4 (15 HSPs)
chr4 (13-63)||(41346968-41347018)
chr4 (4-57)||(51969044-51969097)
chr4 (13-65)||(38869787-38869839)
chr4 (12-45)||(43728434-43728467)
chr4 (17-62)||(53496899-53496944)
chr4 (13-65)||(7292803-7292855)
chr4 (13-65)||(12798703-12798755)
chr4 (13-65)||(30938224-30938276)
chr4 (13-65)||(37109356-37109408)
chr4 (13-45)||(2185037-2185069)
chr4 (13-65)||(13015446-13015498)
chr4 (13-65)||(15729502-15729553)
chr4 (13-45)||(23377995-23378027)
chr4 (17-65)||(31759667-31759715)
chr4 (13-45)||(49576899-49576931)
[»] chr1 (22 HSPs)
chr1 (14-64)||(47720850-47720900)
chr1 (14-64)||(47727842-47727892)
chr1 (12-65)||(9165199-9165252)
chr1 (13-65)||(2799881-2799933)
chr1 (13-65)||(8177187-8177239)
chr1 (13-61)||(15786325-15786373)
chr1 (13-65)||(33700778-33700830)
chr1 (13-65)||(51703798-51703850)
chr1 (12-64)||(52116785-52116837)
chr1 (17-64)||(41508851-41508898)
chr1 (13-63)||(16893415-16893465)
chr1 (13-63)||(51814515-51814565)
chr1 (12-45)||(10150873-10150906)
chr1 (13-66)||(30420328-30420381)
chr1 (13-53)||(521249-521289)
chr1 (13-45)||(3265963-3265995)
chr1 (13-45)||(6122833-6122865)
chr1 (13-65)||(6650614-6650666)
chr1 (13-45)||(38947477-38947509)
chr1 (12-64)||(40257419-40257471)
chr1 (25-65)||(44046165-44046205)
chr1 (13-65)||(52336779-52336831)
[»] chr2 (12 HSPs)
chr2 (13-65)||(29503290-29503342)
chr2 (14-65)||(16918584-16918635)
chr2 (13-63)||(23465926-23465976)
chr2 (4-65)||(12801308-12801369)
chr2 (13-49)||(6859317-6859353)
chr2 (13-65)||(17737629-17737681)
chr2 (4-64)||(18259750-18259810)
chr2 (13-65)||(42327400-42327452)
chr2 (12-46)||(33839264-33839298)
chr2 (12-65)||(23230609-23230662)
chr2 (13-65)||(13803514-13803566)
chr2 (13-45)||(21195681-21195713)
[»] scaffold0291 (1 HSPs)
scaffold0291 (13-64)||(2475-2526)
[»] chr7 (13 HSPs)
chr7 (14-65)||(18363715-18363766)
chr7 (13-45)||(9183196-9183228)
chr7 (13-65)||(26459415-26459467)
chr7 (16-63)||(21854569-21854616)
chr7 (18-65)||(25021345-25021392)
chr7 (13-64)||(43590927-43590978)
chr7 (17-63)||(20952158-20952204)
chr7 (13-63)||(25590632-25590682)
chr7 (13-66)||(7721387-7721440)
chr7 (13-65)||(17041017-17041069)
chr7 (13-45)||(22760902-22760934)
chr7 (13-65)||(41519269-41519321)
chr7 (13-65)||(43215203-43215255)
[»] chr6 (10 HSPs)
chr6 (13-64)||(13227163-13227214)
chr6 (13-65)||(24555738-24555790)
chr6 (17-65)||(28363956-28364004)
chr6 (22-65)||(34293830-34293873)
chr6 (12-65)||(3779358-3779411)
chr6 (12-53)||(15951306-15951347)
chr6 (21-53)||(8268669-8268701)
chr6 (13-45)||(20213080-20213112)
chr6 (13-45)||(22107103-22107135)
chr6 (13-45)||(23910116-23910148)
[»] scaffold0126 (1 HSPs)
scaffold0126 (13-65)||(25352-25404)
[»] scaffold0122 (1 HSPs)
scaffold0122 (13-65)||(6924-6976)
[»] scaffold1367 (1 HSPs)
scaffold1367 (13-64)||(845-896)
[»] scaffold0299 (1 HSPs)
scaffold0299 (13-64)||(11548-11599)
[»] scaffold0118 (1 HSPs)
scaffold0118 (12-65)||(41637-41690)
[»] scaffold0002 (1 HSPs)
scaffold0002 (12-65)||(94975-95028)
[»] scaffold0178 (1 HSPs)
scaffold0178 (13-65)||(6639-6691)
[»] scaffold0021 (1 HSPs)
scaffold0021 (27-63)||(157006-157042)


Alignment Details
Target: chr3 (Bit Score: 166; Significance: 7e-89; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 63 - 277
Target Start/End: Original strand, 54101836 - 54102055
Alignment:
Q  63 acttaaaaattgattattgaattacaaatagcaacaataccatttatacacatcaattttgcattcacaatattttggcttgttcgannnnnnnnnn--- 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
T  54101836 acttaaaaattgattattgaattacaaatagcaacaataccatttatacacatcaattttgcattcacaatattttggcttgttcgattttttttttttt 54101935  T
Q  160 --gcattcacaatctaaccaactaaacttaatttgtaacacactttggattactaacaaactaacttcacaatacttatcgctgcttaagcaaacgagtc 257  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54101936 ttgcattcacaatctaaccaactaaacttaatttgtaacacactttggattactaacaaactaacttcacaatacttatcgctgcttaagcaaacgagtc 54102035  T
Q  258 gtcattgagtaatgagattg 277  Q
    |||||||||||| |||||||    
T  54102036 gtcattgagtaaggagattg 54102055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 4222212 - 4222160
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||||||    
T  4222212 gaacctaagactttgaggaggagcacactcccagatcccaagccaataccact 4222160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 14339681 - 14339630
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||    
T  14339681 gaacctgagacattgaggaggagcacactcccaaatcccaagccaataccac 14339630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 8501577 - 8501618
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaa 53  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  8501577 tgaacctgaaactttgaggaggagcacactcccagatctcaa 8501618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 30311377 - 30311325
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||||||||||| ||| ||| || ||||||||    
T  30311377 gaacctgagaccttgaggaggagcacactcccagatcccaagcctataccact 30311325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 47454622 - 47454674
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| | ||||||||||||||||| | ||||||| |||||||||||    
T  47454622 gaacctgagacctcgaggaggagcacactccaagatctcaagccaataccact 47454674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 27923048 - 27923099
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||||||||||| |||||||||||||||| |||| || ||| ||||||||||    
T  27923048 gaacctgagactatgaggaggagcacacttccatgtcccaagccaataccac 27923099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 29563971 - 29563920
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||||||||||| |||||| |||||||| ||| ||||||| ||||||||||    
T  29563971 gaacctgagacttcgaggagaagcacacttccagatctcaagccaataccac 29563920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 36720452 - 36720401
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||||||| || | ||||||||||||||||||||||| ||| ||||||||||    
T  36720452 gaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccac 36720401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 46518698 - 46518647
Alignment:
Q  14 aacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||| || ||||||||||||||||||||| ||| ||| |||||||||||    
T  46518698 aacctgaaaccttgaggaggagcacactcccagatcccaagccaataccact 46518647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 17108904 - 17108954
Alignment:
Q  14 aacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||||||||| ||||||||||||||||||||| ||||| |  |||||||||    
T  17108904 aacctgagaccttgaggaggagcacactcccacatctccagtcaataccac 17108954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 44069828 - 44069778
Alignment:
Q  14 aacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||||||||| ||||||||||||||||||| | ||||||| |||| |||||    
T  44069828 aacctgagaccttgaggaggagcacactccaagatctcaagccaacaccac 44069778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 36010813 - 36010780
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccat 46  Q
    |||| |||||||||||||||||||||||||||||    
T  36010813 gaacttgagactttgaggaggagcacactcccat 36010780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 49452945 - 49452912
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactccca 45  Q
    |||||||||||| |||||||||||||||||||||    
T  49452945 tgaacctgagaccttgaggaggagcacactccca 49452912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 53413017 - 53412964
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||||||| |||||||||||||||||||||  |  ||| |||||||||||    
T  53413017 tgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccact 53412964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 8170743 - 8170691
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||| |||||||||||||||  | |||| |||||||||||    
T  8170743 gaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccact 8170691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 37051299 - 37051351
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||||||||| ||||||| |||||||||| ||| |||| ||||| ||||    
T  37051299 gaacctgagactttaaggaggaacacactcccagatcccaaatcaatatcact 37051351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 43442267 - 43442215
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  43442267 gaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccact 43442215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 29692392 - 29692442
Alignment:
Q  14 aacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  29692392 aacctgagactttgaggaggagcacactcccagatcccaatccaataccac 29692442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 30883202 - 30883255
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||| |||||| |||||||||||||||||||||  || ||| |||||||||||    
T  30883202 tgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccact 30883255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 12877764 - 12877712
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| |||||||| | |||||||||| ||| ||||||||| |||||    
T  12877764 gaacctgagacattgaggagaaacacactcccaaatcccaaaccaatgccact 12877712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 14285232 - 14285200
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  14285232 gaacctgagaccttgaggaggagcacactccca 14285200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 21549142 - 21549194
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||| ||||||||| ||||||||||||||||||  || ||| |||||||||||    
T  21549142 gaacttgagactttaaggaggagcacactcccaggtcccaagccaataccact 21549194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 25627128 - 25627076
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| |||||||||||||||||||||  |  ||| |||||||||||    
T  25627128 gaacctgagaccttgaggaggagcacactcccaagttccaagccaataccact 25627076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 30483888 - 30483941
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  30483888 tgaacctgagactctgaggaggagcacactcccatatcccaagccaataccact 30483941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 23361653 - 23361705
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||||||||||| ||||||||||||||||||||||||| |||  |||||||||    
T  23361653 tgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccac 23361705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 36205266 - 36205219
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaata 60  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  36205266 gaacatgagaccttgaggaggagcacactcccagatctcaaaccaata 36205219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 33727878 - 33727930
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||||||| |||  ||||||||| ||||||||    
T  33727878 gaacctgagaccttgaggaggagcacacttccaagtctcaaacctataccact 33727930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 28783131 - 28783080
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||| |||||| |||||||||||||||||||||  |||||| ||||||||||    
T  28783131 gaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccac 28783080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 35641906 - 35641957
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||||||||| | ||||||||||||||||||| ||||||| || |||||||    
T  35641906 gaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccac 35641957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 4436042 - 4435996
Alignment:
Q  17 ctgagactttgaggaggagcacactcccatatctcaaaccaatacca 63  Q
    ||||||| |||||||||||||| ||||||| |||||| |||||||||    
T  4436042 ctgagaccttgaggaggagcactctcccatgtctcaagccaatacca 4435996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 7286272 - 7286226
Alignment:
Q  19 gagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||| | |||||||||||||||| ||| |||||||||||||||    
T  7286272 gagactttaaagaggagcacactcccagatcccaaaccaataccact 7286226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 2203560 - 2203511
Alignment:
Q  16 cctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||| |||||||||||||||||||||  || ||| |||||||||||    
T  2203560 cctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 2203511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 6536592 - 6536539
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||||||| ||||||||||||||||||| |  || ||| |||||||||||    
T  6536592 tgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccact 6536539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 3624651 - 3624599
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| |||| ||||||||||||||||  || ||| |||||||||||    
T  3624651 gaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccact 3624599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 11819847 - 11819815
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  11819847 gaacctgagaccttgaggaggagcacactccca 11819815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 16852411 - 16852359
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| | |||||||||||||||||||  || ||| |||||||||||    
T  16852411 gaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccact 16852359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 19703492 - 19703544
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| |||||||||||||||||| ||  || ||| |||||||||||    
T  19703492 gaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccact 19703544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 27750801 - 27750769
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  27750801 gaacctgagaccttgaggaggagcacactccca 27750769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 35690069 - 35690121
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||| || |||| ||| ||| |||||||||||    
T  35690069 gaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccact 35690121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 13051 - 13102
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  13051 gaacctgagaccttgaggaggagcacactcccagatctcaagccaataccac 13102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 41346968 - 41347018
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaatacca 63  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  41346968 gaacctgagacttcgaggaggagcatactcccagatctcaaaccaatacca 41347018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 51969097 - 51969044
Alignment:
Q  4 gagagagatgaacctgagactttgaggaggagcacactcccatatctcaaacca 57  Q
    |||||| |||||||||| || ||||||||||||||||||||| |||||||||||    
T  51969097 gagagaaatgaacctgaaaccttgaggaggagcacactcccaaatctcaaacca 51969044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 38869839 - 38869787
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||    
T  38869839 gaacctgagaccttgaggaggagcacactcccagatcccaagccaataccact 38869787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 43728467 - 43728434
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||||||||||||||||||||||||||    
T  43728467 tgaacctgagactttgaggaggagcacactccca 43728434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 53496944 - 53496899
Alignment:
Q  17 ctgagactttgaggaggagcacactcccatatctcaaaccaatacc 62  Q
    |||||||||||||||||||||||||||||  || ||||||||||||    
T  53496944 ctgagactttgaggaggagcacactcccaggtcccaaaccaatacc 53496899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 7292803 - 7292855
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||||||||||||||||||||||||||||  |  ||| |||||||||||    
T  7292803 gaacctgagactttgaggaggagcacactcccaggttccaagccaataccact 7292855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 12798755 - 12798703
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||| || | |||||| |||||||||||| |||||||||||||||||||    
T  12798755 gaacctgaaacctcgaggagcagcacactcccagatctcaaaccaataccact 12798703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 30938224 - 30938276
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| | ||||||||||||||||| | ||| |||||||||||||||    
T  30938224 gaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccact 30938276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 37109356 - 37109408
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| |||||||||||||||||||||  || ||| |||||||||||    
T  37109356 gaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 37109408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 2185037 - 2185069
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||||||||| |||||||||||||||    
T  2185037 gaacctgagactttgagaaggagcacactccca 2185069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 13015498 - 13015446
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||| |||||||| |||||||||||||||||||  || ||| |||||||||||    
T  13015498 gaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccact 13015446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 15729553 - 15729502
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||| |||||| | |||||||||||||||| || |||||||||||||||||||    
T  15729553 gaacttgagacatcgaggaggagcacactctca-atctcaaaccaataccact 15729502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 23378027 - 23377995
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  23378027 gaacctgagaccttgaggaggagcacactccca 23377995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 31759667 - 31759715
Alignment:
Q  17 ctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||| |||||||||||||||||||||  || ||| |||||||||||    
T  31759667 ctgagaccttgaggaggagcacactcccaagtcccaagccaataccact 31759715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 49576899 - 49576931
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  49576899 gaacctgagaccttgaggaggagcacactccca 49576931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 47720900 - 47720850
Alignment:
Q  14 aacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  47720900 aacctgagactttgaggaggagcacactcctatatctcaagtcaataccac 47720850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 47727892 - 47727842
Alignment:
Q  14 aacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  47727892 aacctgagactttgaggaggagcacactcctatatctcaagtcaataccac 47727842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 9165199 - 9165252
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||||||||||||||||||||||||||  || ||| |||||||||||    
T  9165199 tgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccact 9165252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 2799933 - 2799881
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||||||||||| ||||||| || ||||||||    
T  2799933 gaacctgagaccttgaggaggagcacactcccagatctcaagcctataccact 2799881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 8177187 - 8177239
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||| || ||||||||||||||||||||| ||| ||| |||||||||||    
T  8177187 gaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccact 8177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 15786325 - 15786373
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaatac 61  Q
    ||||||||||| ||||||||||||||||||||| ||| ||| |||||||    
T  15786325 gaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 15786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 33700778 - 33700830
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||||||||||| ||  ||| |||||||||||    
T  33700778 gaacctgagaccttgaggaggagcacactcccagattccaagccaataccact 33700830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 51703850 - 51703798
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||| |||||||||||||||||||||||| ||  ||| |||||||||||    
T  51703850 gaacctgaaactttgaggaggagcacactcccagattccaagccaataccact 51703798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 52116785 - 52116837
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||||||||||| |||||||||||||||||||||  || ||| ||||||||||    
T  52116785 tgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccac 52116837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 41508898 - 41508851
Alignment:
Q  17 ctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||||| ||||||||||||||||||||| ||| ||||||| ||||||    
T  41508898 ctgagaccttgaggaggagcacactcccagatcccaaaccagtaccac 41508851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 16893465 - 16893415
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaatacca 63  Q
    ||||||||||| | ||||||||| ||||||||| ||||||| |||||||||    
T  16893465 gaacctgagacctcgaggaggagtacactcccaaatctcaagccaatacca 16893415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 51814565 - 51814515
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaatacca 63  Q
    ||||||||||| |||||||||||||||||| || |||||||  ||||||||    
T  51814565 gaacctgagaccttgaggaggagcacactctcagatctcaagtcaatacca 51814515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 10150873 - 10150906
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactccca 45  Q
    |||||||||||||||||||||||| |||||||||    
T  10150873 tgaacctgagactttgaggaggagtacactccca 10150906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 30420381 - 30420328
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccactt 66  Q
    ||||||||||  ||||||||||||||||||| ||||| ||| |||| |||||||    
T  30420381 gaacctgagatgttgaggaggagcacactcctatatcccaagccaaaaccactt 30420328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 521289 - 521249
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaa 53  Q
    |||||||||||||| ||||||||||||| |||| |||||||    
T  521289 gaacctgagactttaaggaggagcacacccccaaatctcaa 521249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 3265995 - 3265963
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  3265995 gaacctgagaccttgaggaggagcacactccca 3265963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 6122865 - 6122833
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  6122865 gaacctgagaccttgaggaggagcacactccca 6122833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 6650666 - 6650614
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||| ||||||  ||| ||| |||||||||||    
T  6650666 gaacctgagacattgaggaggagcatactccccgatcccaagccaataccact 6650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 38947477 - 38947509
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  38947477 gaacctgagaccttgaggaggagcacactccca 38947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 40257471 - 40257419
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||| |||||| | |||||||||||||||||||  |||||| ||||||||||    
T  40257471 tgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccac 40257419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 44046165 - 44046205
Alignment:
Q  25 ttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||||||||||||| ||| ||| |||||||||||    
T  44046165 ttgaggaggagcacactcccagatcccaagccaataccact 44046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 52336779 - 52336831
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||  || |||||||||||||||||| ||| ||| |||||||||||    
T  52336779 gaacctgagatcttaaggaggagcacactcccagatcccaagccaataccact 52336831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 29503342 - 29503290
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| |||||||||||||||||||||  || |||||||||||||||    
T  29503342 gaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccact 29503290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 16918584 - 16918635
Alignment:
Q  14 aacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||| |||| ||||||||||||||||||||| ||| |||||||||||||||    
T  16918584 aacctaagaccttgaggaggagcacactcccagatcccaaaccaataccact 16918635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 23465926 - 23465976
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaatacca 63  Q
    ||||||||||||||||||||||||| ||||||| |||  ||||||||||||    
T  23465926 gaacctgagactttgaggaggagcatactcccaaatcctaaaccaatacca 23465976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 12801369 - 12801308
Alignment:
Q  4 gagagagatgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||  ||||||||||||||||||||||||| || |||| ||| ||||| |||||||||    
T  12801369 gagagagtcgaacctgagactttgaggaggagcatacccccagatcccaaactaataccact 12801308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 6859317 - 6859353
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatc 49  Q
    |||||||||||||||| ||||||||||||||||||||    
T  6859317 gaacctgagactttgaagaggagcacactcccatatc 6859353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 17737629 - 17737681
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||| |||||| |||||||||||||||||||||  || |||||||||||||||    
T  17737629 gaacatgagaccttgaggaggagcacactcccaagtcacaaaccaataccact 17737681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 18259810 - 18259750
Alignment:
Q  4 gagagagatgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||||| |||||||||||| |  ||||||||||||||| || ||||||| ||||||||||    
T  18259810 gagagagttgaacctgagacctataggaggagcacactctcaaatctcaagccaataccac 18259750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 42327400 - 42327452
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| |||||||||||||||||||||  || ||| |||||||||||    
T  42327400 gaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 42327452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 33839264 - 33839298
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccat 46  Q
    |||||||||||| ||||||||||||||||||||||    
T  33839264 tgaacctgagaccttgaggaggagcacactcccat 33839298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 23230609 - 23230662
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||  ||||||||||||||||||||||||  || |||| ||||||||||    
T  23230609 tgaacctggaactttgaggaggagcacactcccagttcccaaatcaataccact 23230662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 13803566 - 13803514
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||||||||| |  |||||| |||||| ||||    
T  13803566 gaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcact 13803514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 21195681 - 21195713
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  21195681 gaacctgagaccttgaggaggagcacactccca 21195713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 2475 - 2526
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||||||||| ||||||||||||||||||||| |||  |||||||||||||    
T  2475 gaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccac 2526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 18363766 - 18363715
Alignment:
Q  14 aacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||||| ||||||||||||||||||||| ||||||| || ||||||||    
T  18363766 aacctgagaccttgaggaggagcacactcccaaatctcaagcctataccact 18363715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 9183196 - 9183228
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    |||||||||||||||||||||||||||||||||    
T  9183196 gaacctgagactttgaggaggagcacactccca 9183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 26459415 - 26459467
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| |||||||||||||||||||||  || ||| |||||||||||    
T  26459415 gaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 26459467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 21854616 - 21854569
Alignment:
Q  16 cctgagactttgaggaggagcacactcccatatctcaaaccaatacca 63  Q
    |||||||||||||||||||||||||||||| ||| | | |||||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaatacca 21854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 25021345 - 25021392
Alignment:
Q  18 tgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||||||||||||||||||||  || ||| |||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccact 25021392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 43590978 - 43590927
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||||||||| |||||||||||||||||||||  || ||| ||||||||||    
T  43590978 gaacctgagacattgaggaggagcacactcccaagtcccaagccaataccac 43590927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 20952158 - 20952204
Alignment:
Q  17 ctgagactttgaggaggagcacactcccatatctcaaaccaatacca 63  Q
    |||||| ||||||||||||||||||||||  || |||||||||||||    
T  20952158 ctgagattttgaggaggagcacactcccaggtcccaaaccaatacca 20952204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 25590682 - 25590632
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaatacca 63  Q
    ||||| ||||| | ||||||||||||||||||| ||||||| |||||||||    
T  25590682 gaacccgagacctcgaggaggagcacactcccagatctcaagccaatacca 25590632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 7721440 - 7721387
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccactt 66  Q
    |||| |||||| ||||||||||| |||||||||  || ||||||||||||||||    
T  7721440 gaacatgagaccttgaggaggagtacactcccaggtcccaaaccaataccactt 7721387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 17041017 - 17041069
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||||||| ||| ||| ||| ||||| |||||    
T  17041017 gaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccact 17041069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 22760934 - 22760902
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  22760934 gaacctgagaccttgaggaggagcacactccca 22760902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 41519269 - 41519321
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||||||||| | ||| |||  ||||||||||    
T  41519269 gaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccact 41519321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 43215255 - 43215203
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||||||||||||||||| |  || ||| |||||||||||    
T  43215255 gaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccact 43215203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 13227163 - 13227214
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    |||| |||||||| ||||||||||||||||||| |||||| |||||||||||    
T  13227163 gaacttgagacttcgaggaggagcacactcccagatctcataccaataccac 13227214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 24555790 - 24555738
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||  ||||||||||||| ||||| | |||||||||||||||||||    
T  24555790 gaacctgagatcttgaggaggagcatactccgagatctcaaaccaataccact 24555738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 28364004 - 28363956
Alignment:
Q  17 ctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||| |||||||||||||||||| || ||| |||||||||||||||    
T  28364004 ctgagaccttgaggaggagcacactcgcagatcccaaaccaataccact 28363956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 34293830 - 34293873
Alignment:
Q  22 actttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||||||||||||||||||| ||  |||||||||||||||    
T  34293830 actttgaggaggagcacactcccaaattccaaaccaataccact 34293873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 3779411 - 3779358
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||| ||||||| ||||| |||||||||||||||  |||||| |||||||||||    
T  3779411 tgaatctgagaccttgagaaggagcacactcccaagtctcaagccaataccact 3779358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 15951306 - 15951347
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaa 53  Q
    ||||| |||||| ||||||||||||||||||||| |||||||    
T  15951306 tgaacatgagaccttgaggaggagcacactcccaaatctcaa 15951347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 8268701 - 8268669
Alignment:
Q  21 gactttgaggaggagcacactcccatatctcaa 53  Q
    ||||||||||||||||||||||||| |||||||    
T  8268701 gactttgaggaggagcacactcccaaatctcaa 8268669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 20213112 - 20213080
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  20213112 gaacctgagacattgaggaggagcacactccca 20213080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 22107135 - 22107103
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  22107135 gaacctgagacattgaggaggagcacactccca 22107103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 23910116 - 23910148
Alignment:
Q  13 gaacctgagactttgaggaggagcacactccca 45  Q
    ||||||||||| |||||||||||||||||||||    
T  23910116 gaacctgagaccttgaggaggagcacactccca 23910148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 25352 - 25404
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||| ||||| |||||||||||||||  |||||| |||||||||||    
T  25352 gaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccact 25404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 6924 - 6976
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||||||||||||||||||||||||||||||   || ||| |||||||||||    
T  6924 gaacctgagactttgaggaggagcacactccccagtcccaagccaataccact 6976  T

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Target: scaffold1367 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 845 - 896
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||||||||||| ||||||||||||| ||||| ||| ||| ||||||||||    
T  845 gaacctgagacttcgaggaggagcacattcccagatcccaagccaataccac 896  T

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Target: scaffold0299 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 11599 - 11548
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccac 64  Q
    ||||||||||| | ||||||||||||||||||| ||| ||| ||||||||||    
T  11599 gaacctgagacctcgaggaggagcacactcccagatcccaagccaataccac 11548  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 41637 - 41690
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||||||| | ||||||||||| |||| || ||||||| |||||||||||    
T  41637 tgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccact 41690  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 94975 - 95028
Alignment:
Q  12 tgaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    |||||||||||| |||||||||||||||||||||  |  ||| |||||||||||    
T  94975 tgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccact 95028  T

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Target: scaffold0178 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 6639 - 6691
Alignment:
Q  13 gaacctgagactttgaggaggagcacactcccatatctcaaaccaataccact 65  Q
    ||||| |||||||||||||||| ||||||||||  ||  ||||||||||||||    
T  6639 gaacccgagactttgaggaggaacacactcccaagtcctaaaccaataccact 6691  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 157006 - 157042
Alignment:
Q  27 gaggaggagcacactcccatatctcaaaccaatacca 63  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  157006 gaggaggagcacactcccagatctcaagccaatacca 157042  T

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