View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21531_low_3 (Length: 289)
Name: NF21531_low_3
Description: NF21531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21531_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 37460525 - 37460252
Alignment:
| Q |
1 |
tcatcattcttcatgaaagaccatgtatccctaccgcgaatgcatgacaaatcaatggaaggaagcaagctagatggcagattcaactnnnnnnnnttaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
37460525 |
tcatcattcttcatgaaagaccatgtatccctaccgcgaatgcatgacaaatcaatggaaggaagcaagctagatggcagattcaactaaaaaaaattaa |
37460426 |
T |
|
| Q |
101 |
gcatagtcagagttgcattctaaaatcaaacaagatcaaaacctgaataaaaactcactgaggcatcagatactcgatttaatcacctttgttgttgaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37460425 |
gcatagtcagagttgcattctaaaatcaaacaagatcaaaacctgaataaaaactcactgaggcatcagatactcgatttaatcacctttgttgttgaaa |
37460326 |
T |
|
| Q |
201 |
atgctgggactgataatcctataaataagccaagaaatcctccaaagaaaaatatcacaataagcctcatactt |
274 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37460325 |
atgctgggactgataatcctataaataagccaagaaatcctccaaagaaaaatatcacaataagcctcatactt |
37460252 |
T |
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