View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21536_low_17 (Length: 216)
Name: NF21536_low_17
Description: NF21536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21536_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 39936810 - 39936628
Alignment:
| Q |
20 |
ttgttaaggtcacaaatatatagatgtcatttctaatcaactgaattgcttgtgtaatgttccaccactggctgatggtggcatggtgcaagcttactag |
119 |
Q |
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| T |
39936810 |
ttgttaaggtcacaaatatatagatgtcatttctaatcaactgaattgcttgtgtaatgttccaccactggccgatggtggcatggtgcaagcttactag |
39936711 |
T |
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| Q |
120 |
ggtatcttgtttaacaaacaatttattaaatgagcagatgctaagtttatccgcctaaacaatttatgaacatagagtataat |
202 |
Q |
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| T |
39936710 |
ggtatcttgtttaacaaacaatttattaaatgagcagatgctaagtttatccgcctaaacaatttatgaacatagagtataat |
39936628 |
T |
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